Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010219.01.T01 | KEH38737.1 | 92.539 | 831 | 60 | 2 | 1 | 829 | 103 | 933 | 0 | 1541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010219.01.T01 | A0A072VAA8 | 92.539 | 831 | 60 | 2 | 1 | 829 | 103 | 933 | 0.0 | 1541 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004131.01 | MsG0280010219.01 | 0.805477 | 1.309866e-49 | 6.936836e-47 |
| MsG0280010219.01 | MsG0380012008.01 | 0.804536 | 2.061021e-49 | 1.065316e-46 |
| MsG0280010219.01 | MsG0380015217.01 | 0.802182 | 6.334604e-49 | 3.082743e-46 |
| MsG0280010219.01 | MsG0380018026.01 | 0.802901 | 4.503037e-49 | 2.231993e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010219.01.T01 | MTR_2g079310 | 92.539 | 831 | 60 | 2 | 1 | 829 | 103 | 933 | 0.0 | 1541 |
| MsG0280010219.01.T01 | MTR_2g079300 | 65.141 | 852 | 248 | 16 | 2 | 830 | 86 | 911 | 0.0 | 1012 |
| MsG0280010219.01.T01 | MTR_2g013640 | 42.164 | 804 | 406 | 21 | 55 | 822 | 152 | 932 | 0.0 | 589 |
| MsG0280010219.01.T01 | MTR_4g011610 | 24.888 | 671 | 408 | 24 | 206 | 801 | 362 | 1011 | 6.24e-40 | 159 |
| MsG0280010219.01.T01 | MTR_4g071100 | 88.462 | 52 | 6 | 0 | 549 | 600 | 1 | 52 | 7.01e-26 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010219.01.T01 | AT4G21700 | 37.720 | 851 | 467 | 15 | 6 | 819 | 123 | 947 | 0.0 | 556 |
| MsG0280010219.01.T01 | AT1G52780 | 30.488 | 410 | 238 | 15 | 458 | 826 | 641 | 1044 | 3.32e-43 | 170 |
Find 131 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAACATCATTAGAGAAAT+TGG | 0.186922 | 2:-66328430 | None:intergenic |
| AAGTGATGTTTCTGAGAAAA+AGG | 0.197771 | 2:+66328513 | MsG0280010219.01.T01:CDS |
| ATAGCATAATTGGACAAATT+TGG | 0.207848 | 2:+66328959 | MsG0280010219.01.T01:CDS |
| AGTGACTATTGGATTGAAAA+AGG | 0.229449 | 2:+66328754 | MsG0280010219.01.T01:CDS |
| CGATAACTATAGTTTGCTTT+TGG | 0.230875 | 2:-66328451 | None:intergenic |
| CACTGAATTCCGGTTATATA+AGG | 0.242557 | 2:-66329373 | None:intergenic |
| CTTTCAAGCTTGAAGGGTTT+TGG | 0.259324 | 2:+66328215 | MsG0280010219.01.T01:CDS |
| CGCATGCCTATGATCTTTAC+AGG | 0.265337 | 2:+66330297 | MsG0280010219.01.T01:CDS |
| GTTATCATCTTGAAGTAGTT+TGG | 0.269424 | 2:-66329003 | None:intergenic |
| TTGGGATATTGTCATTCCTT+TGG | 0.282244 | 2:+66330394 | MsG0280010219.01.T01:CDS |
| TGGGATATTGTCATTCCTTT+GGG | 0.308996 | 2:+66330395 | MsG0280010219.01.T01:CDS |
| CAGCAATCCAGAGGCCGTTC+TGG | 0.315792 | 2:-66330031 | None:intergenic |
| GAGATGAAGGGAAGCACATT+AGG | 0.318248 | 2:-66329786 | None:intergenic |
| TAAGGTTGAATTAGAAAGTA+TGG | 0.318807 | 2:-66329355 | None:intergenic |
| AATGGAAGCTACGACATTAA+AGG | 0.322650 | 2:+66329570 | MsG0280010219.01.T01:CDS |
| AGCAAACTATAGTTATCGTT+TGG | 0.344477 | 2:+66328456 | MsG0280010219.01.T01:CDS |
| TTTCAAATAAAAGTGACTAT+TGG | 0.348512 | 2:+66328743 | MsG0280010219.01.T01:CDS |
| CTAATTCAACCTTATATAAC+CGG | 0.351661 | 2:+66329364 | MsG0280010219.01.T01:CDS |
| AGCTGTTTGGAGAATGGATA+TGG | 0.353167 | 2:+66329686 | MsG0280010219.01.T01:CDS |
| ATCTACTTGCAGCAACGTTT+TGG | 0.356533 | 2:+66330440 | MsG0280010219.01.T01:CDS |
| GTGGAATTTGAAATGGTAAC+AGG | 0.366199 | 2:-66329270 | None:intergenic |
| GAAGTTTCAGTTTCCATCAT+TGG | 0.366609 | 2:+66329539 | MsG0280010219.01.T01:CDS |
| ACTTGATCACCAACAGATAA+AGG | 0.369401 | 2:-66329237 | None:intergenic |
| ACATGATAGTAAACTGTGTT+TGG | 0.372736 | 2:-66328124 | None:intergenic |
| ATCTTACGGTGGTTTGGTAT+TGG | 0.388222 | 2:+66330169 | MsG0280010219.01.T01:CDS |
| ACAAATTAAACACTGAATTC+CGG | 0.391199 | 2:-66329383 | None:intergenic |
| AACATCACTAGTTTGATTAG+TGG | 0.393229 | 2:+66328352 | MsG0280010219.01.T01:CDS |
| TTTGTAACTTTCAAGCTTGA+AGG | 0.395443 | 2:+66328208 | MsG0280010219.01.T01:CDS |
| CCTTTCAAAGACATCATATA+TGG | 0.395688 | 2:-66328670 | None:intergenic |
| AACTTTGTGTTTGGATATGT+TGG | 0.396638 | 2:+66329900 | MsG0280010219.01.T01:CDS |
| AAAGTTTGTATGGTTGGAAC+AGG | 0.402221 | 2:+66328253 | MsG0280010219.01.T01:CDS |
| CATGAAATCTTACGGTGGTT+TGG | 0.402506 | 2:+66330163 | MsG0280010219.01.T01:CDS |
| ATCTTCTGGAAAAGTTTGTA+TGG | 0.406589 | 2:+66328243 | MsG0280010219.01.T01:CDS |
| GATTGAAATTCCCTTCAGTT+TGG | 0.408596 | 2:+66328920 | MsG0280010219.01.T01:CDS |
| TTCTTGACAACCTTGTGTGC+TGG | 0.413293 | 2:-66329111 | None:intergenic |
| GTAGTTGCTTGCCATTTCAT+TGG | 0.417487 | 2:+66328841 | MsG0280010219.01.T01:CDS |
| AAAACCATAGGAGTTAATAT+TGG | 0.419361 | 2:-66329208 | None:intergenic |
| TGACGCTGACTTCGAGAACT+TGG | 0.422253 | 2:-66328172 | None:intergenic |
| TCTGGAAAAGTTTGTATGGT+TGG | 0.423754 | 2:+66328247 | MsG0280010219.01.T01:CDS |
| GGCAATTGATCACTCATTAT+AGG | 0.425370 | 2:-66328649 | None:intergenic |
| ACGAGTCCTGTAAAGATCAT+AGG | 0.426060 | 2:-66330303 | None:intergenic |
| GTCTGTTGTGGAATTTGAAA+TGG | 0.428495 | 2:-66329277 | None:intergenic |
| CATCATGAAAATTGAGATGA+AGG | 0.429482 | 2:-66329799 | None:intergenic |
| AAACAGCGATAGAAGCTGTT+TGG | 0.433120 | 2:+66329673 | MsG0280010219.01.T01:CDS |
| AGAGAGTTTGAGTTCTGAAA+AGG | 0.435977 | 2:+66328381 | MsG0280010219.01.T01:CDS |
| GAGTCCAATATTAACTCCTA+TGG | 0.444229 | 2:+66329204 | MsG0280010219.01.T01:CDS |
| TCCGTCTTCTTCAACTAACT+TGG | 0.449556 | 2:+66329985 | MsG0280010219.01.T01:CDS |
| ATGAAAGCCAGAACGGCCTC+TGG | 0.451976 | 2:+66330024 | MsG0280010219.01.T01:CDS |
| ATATCATAAGAATAAACATC+TGG | 0.452325 | 2:-66329153 | None:intergenic |
| TTAGAAATTTCGAAGATGAC+AGG | 0.454008 | 2:+66329028 | MsG0280010219.01.T01:CDS |
| ATTTCATGATGCCAATGAAA+TGG | 0.456483 | 2:-66328852 | None:intergenic |
| ATCAGAAGCTGAAGTGCAAA+TGG | 0.460410 | 2:+66330532 | MsG0280010219.01.T01:CDS |
| ACTCATGAGTGTACTCTAAT+CGG | 0.461660 | 2:-66328603 | None:intergenic |
| GTTTCAACAGAATTCATCTT+GGG | 0.468650 | 2:+66330136 | MsG0280010219.01.T01:CDS |
| TACGGTGGTTTGGTATTGGA+TGG | 0.472128 | 2:+66330173 | MsG0280010219.01.T01:CDS |
| AATCCGAAAACTACGTTGGT+AGG | 0.475253 | 2:+66328781 | MsG0280010219.01.T01:CDS |
| TGATATGAGATTTGATATGT+TGG | 0.477720 | 2:+66329170 | MsG0280010219.01.T01:CDS |
| CATTAGGGTGTTTCTTGACA+TGG | 0.479152 | 2:-66329770 | None:intergenic |
| ATGATGTCAATTCTCACAAT+GGG | 0.479267 | 2:+66329816 | MsG0280010219.01.T01:CDS |
| TTTGATCCTTTGAATCTATG+AGG | 0.483046 | 2:-66330479 | None:intergenic |
| AGATGAAGGGAAGCACATTA+GGG | 0.483338 | 2:-66329785 | None:intergenic |
| CGTTGGTAGGGGAAGGTTGG+TGG | 0.487939 | 2:+66328794 | MsG0280010219.01.T01:CDS |
| GCCAAGACGGATGCCATTCA+AGG | 0.488453 | 2:-66328878 | None:intergenic |
| AGGATCAAAGGTATATGAAA+AGG | 0.489279 | 2:+66330493 | MsG0280010219.01.T01:CDS |
| AGTTTCAACAGAATTCATCT+TGG | 0.491537 | 2:+66330135 | MsG0280010219.01.T01:CDS |
| CATGATGTCAATTCTCACAA+TGG | 0.491712 | 2:+66329815 | MsG0280010219.01.T01:CDS |
| TCCTTGAATGGCATCCGTCT+TGG | 0.496853 | 2:+66328877 | MsG0280010219.01.T01:CDS |
| ACAGGAACCTTGTGTATGAT+TGG | 0.498917 | 2:+66329453 | MsG0280010219.01.T01:CDS |
| TTCTTCATTTGCAATTTACT+CGG | 0.501178 | 2:+66329650 | MsG0280010219.01.T01:CDS |
| ATTTCTTAACTCTTTCAAGC+TGG | 0.501659 | 2:-66329083 | None:intergenic |
| CGCAATCTTAACTCAAAGGC+TGG | 0.504135 | 2:+66329480 | MsG0280010219.01.T01:CDS |
| GAGAGTTTGAGTTCTGAAAA+GGG | 0.509784 | 2:+66328382 | MsG0280010219.01.T01:CDS |
| AATTATGCTCAACTCGGCGA+TGG | 0.510910 | 2:+66330326 | MsG0280010219.01.T01:CDS |
| ATCATGAAATCGTCCTTGAA+TGG | 0.513058 | 2:+66328865 | MsG0280010219.01.T01:CDS |
| ATCCGAAAACTACGTTGGTA+GGG | 0.513232 | 2:+66328782 | MsG0280010219.01.T01:CDS |
| AGAAAACAAGCATAGGTTGA+AGG | 0.515198 | 2:+66328708 | MsG0280010219.01.T01:CDS |
| CATCCGTCTTGGCGATTGCT+CGG | 0.515903 | 2:+66328888 | MsG0280010219.01.T01:CDS |
| CAGAAGGTACTTATGATTCA+AGG | 0.516498 | 2:+66329430 | MsG0280010219.01.T01:CDS |
| CCTCTGGATTGCTGAGAGAA+AGG | 0.518991 | 2:+66330040 | MsG0280010219.01.T01:CDS |
| TTGTAACTTTCAAGCTTGAA+GGG | 0.520372 | 2:+66328209 | MsG0280010219.01.T01:CDS |
| GATAGAAGCTGTTTGGAGAA+TGG | 0.520712 | 2:+66329680 | MsG0280010219.01.T01:CDS |
| CTACGTTGGTAGGGGAAGGT+TGG | 0.520779 | 2:+66328791 | MsG0280010219.01.T01:CDS |
| AAGTTAATGAAATAGCTGTA+AGG | 0.521660 | 2:+66329931 | MsG0280010219.01.T01:CDS |
| ACAAGGTTGTCAAGAACAAA+GGG | 0.531404 | 2:+66329118 | MsG0280010219.01.T01:CDS |
| GCATAGGTTGAAGGTTATGA+TGG | 0.533152 | 2:+66328717 | MsG0280010219.01.T01:CDS |
| TGGGAGAACATGAAATCTTA+CGG | 0.533397 | 2:+66330155 | MsG0280010219.01.T01:CDS |
| AATAATCCAGCTGCATACAA+AGG | 0.536085 | 2:-66330080 | None:intergenic |
| ATAATCCAGCTGCATACAAA+GGG | 0.540543 | 2:-66330079 | None:intergenic |
| TTGTGTTTGGATATGTTGGA+TGG | 0.542000 | 2:+66329904 | MsG0280010219.01.T01:CDS |
| CATGTAAGCAACTTTAGCTA+TGG | 0.542750 | 2:+66328142 | MsG0280010219.01.T01:CDS |
| AATGGATATGGAGATTATCA+TGG | 0.548482 | 2:+66329698 | MsG0280010219.01.T01:CDS |
| AATTTCGAAGATGACAGGGT+TGG | 0.552719 | 2:+66329033 | MsG0280010219.01.T01:CDS |
| TCCGAAAACTACGTTGGTAG+GGG | 0.555710 | 2:+66328783 | MsG0280010219.01.T01:CDS |
| GGTACTTATGATTCAAGGAC+AGG | 0.556525 | 2:+66329435 | MsG0280010219.01.T01:CDS |
| CACAAGGTTGTCAAGAACAA+AGG | 0.565650 | 2:+66329117 | MsG0280010219.01.T01:CDS |
| TTCCACAACAGACACTCCTA+TGG | 0.566678 | 2:+66329287 | MsG0280010219.01.T01:CDS |
| GATATTGTCATTCCTTTGGG+AGG | 0.567628 | 2:+66330398 | MsG0280010219.01.T01:CDS |
| TTGCCGCAATCTTAACTCAA+AGG | 0.572037 | 2:+66329476 | MsG0280010219.01.T01:CDS |
| TCATAGATTCAAAGGATCAA+AGG | 0.572929 | 2:+66330481 | MsG0280010219.01.T01:CDS |
| GTTCTGCCTCATAGATTCAA+AGG | 0.574597 | 2:+66330473 | MsG0280010219.01.T01:CDS |
| GTTGGTAGGGGAAGGTTGGT+GGG | 0.583510 | 2:+66328795 | MsG0280010219.01.T01:CDS |
| GAAATCATGTCCAGCACACA+AGG | 0.589576 | 2:+66329101 | MsG0280010219.01.T01:CDS |
| ATCATGAAAATTGAGATGAA+GGG | 0.595539 | 2:-66329798 | None:intergenic |
| AGCTGTAAGGATTATAACAA+TGG | 0.597737 | 2:+66329944 | MsG0280010219.01.T01:CDS |
| TAGAAATTTCGAAGATGACA+GGG | 0.600967 | 2:+66329029 | MsG0280010219.01.T01:CDS |
| GCTTCTGATTCAGTCACCAC+AGG | 0.601246 | 2:-66330518 | None:intergenic |
| CTTCTAATAGCTCTTGAGAG+TGG | 0.601771 | 2:-66328577 | None:intergenic |
| GTTCTCAAGAAAACAAGCAT+AGG | 0.605390 | 2:+66328701 | MsG0280010219.01.T01:CDS |
| AGAGTGAAGATTTCAGCAGA+AGG | 0.606308 | 2:+66329414 | MsG0280010219.01.T01:CDS |
| TTACCGAGCAATCGCCAAGA+CGG | 0.607355 | 2:-66328891 | None:intergenic |
| CACCATAGGAGTGTCTGTTG+TGG | 0.607425 | 2:-66329289 | None:intergenic |
| AAAACTACGTTGGTAGGGGA+AGG | 0.612097 | 2:+66328787 | MsG0280010219.01.T01:CDS |
| GCTTCGAAATTGAGAACAAG+CGG | 0.617144 | 2:-66329849 | None:intergenic |
| AACAAGTTTAGAAATACTTG+TGG | 0.618557 | 2:-66330206 | None:intergenic |
| CCATATATGATGTCTTTGAA+AGG | 0.621501 | 2:+66328670 | MsG0280010219.01.T01:CDS |
| CCATTGTTGAACATCACCAT+AGG | 0.630256 | 2:-66329303 | None:intergenic |
| AAGACTAATGAAAGCCAGAA+CGG | 0.634141 | 2:+66330017 | MsG0280010219.01.T01:CDS |
| TTTCAATCCGAAAACTACGT+TGG | 0.634421 | 2:+66328777 | MsG0280010219.01.T01:CDS |
| ACCAAGTTAGTTGAAGAAGA+CGG | 0.644238 | 2:-66329986 | None:intergenic |
| CAGCCTTTGAGTTAAGATTG+CGG | 0.648649 | 2:-66329479 | None:intergenic |
| GCAAATAAGATACCTCCCAA+AGG | 0.662067 | 2:-66330410 | None:intergenic |
| AGCAGTTCTGAATGAAACAG+TGG | 0.667363 | 2:-66328101 | None:intergenic |
| ACTCGTAATTATGCTCAACT+CGG | 0.677828 | 2:+66330320 | MsG0280010219.01.T01:CDS |
| CTGTAAAGATCATAGGCATG+CGG | 0.680972 | 2:-66330296 | None:intergenic |
| CCTTTCTCTCAGCAATCCAG+AGG | 0.683130 | 2:-66330040 | None:intergenic |
| CCTATGGTGATGTTCAACAA+TGG | 0.683459 | 2:+66329303 | MsG0280010219.01.T01:CDS |
| TGGAACACAGTTACGCTCTG+TGG | 0.689056 | 2:+66329500 | MsG0280010219.01.T01:CDS |
| GGTATATGAAAAGGTGCCTG+TGG | 0.700967 | 2:+66330502 | MsG0280010219.01.T01:CDS |
| GCGGCAACCAATCATACACA+AGG | 0.708091 | 2:-66329460 | None:intergenic |
| GAGAACATGAAATCTTACGG+TGG | 0.722259 | 2:+66330158 | MsG0280010219.01.T01:CDS |
| AAGGAAGTATCAAAAGCACG+CGG | 0.756530 | 2:+66329589 | MsG0280010219.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATACTAATAGCATAAT+TGG | + | Chr2:66328949-66328968 | MsG0280010219.01.T01:CDS | 15.0% |
| !! | ATATCATAAGAATAAACATC+TGG | - | Chr2:66329156-66329175 | None:intergenic | 20.0% |
| !! | TTTCAAATAAAAGTGACTAT+TGG | + | Chr2:66328743-66328762 | MsG0280010219.01.T01:CDS | 20.0% |
| !!! | TTTTTGCTGTTATAATTTTG+AGG | - | Chr2:66329882-66329901 | None:intergenic | 20.0% |
| ! | AAAACCATAGGAGTTAATAT+TGG | - | Chr2:66329211-66329230 | None:intergenic | 25.0% |
| ! | AACAAGTTTAGAAATACTTG+TGG | - | Chr2:66330209-66330228 | None:intergenic | 25.0% |
| ! | AAGTTAATGAAATAGCTGTA+AGG | + | Chr2:66329931-66329950 | MsG0280010219.01.T01:CDS | 25.0% |
| ! | ACAAATTAAACACTGAATTC+CGG | - | Chr2:66329386-66329405 | None:intergenic | 25.0% |
| ! | ATAGCATAATTGGACAAATT+TGG | + | Chr2:66328959-66328978 | MsG0280010219.01.T01:CDS | 25.0% |
| ! | ATCATGAAAATTGAGATGAA+GGG | - | Chr2:66329801-66329820 | None:intergenic | 25.0% |
| ! | CTAATTCAACCTTATATAAC+CGG | + | Chr2:66329364-66329383 | MsG0280010219.01.T01:CDS | 25.0% |
| ! | GAACAAAAACTTGATGAATA+TGG | - | Chr2:66328553-66328572 | None:intergenic | 25.0% |
| ! | TAAGGTTGAATTAGAAAGTA+TGG | - | Chr2:66329358-66329377 | None:intergenic | 25.0% |
| ! | TGATATGAGATTTGATATGT+TGG | + | Chr2:66329170-66329189 | MsG0280010219.01.T01:CDS | 25.0% |
| ! | TTCTTCATTTGCAATTTACT+CGG | + | Chr2:66329650-66329669 | MsG0280010219.01.T01:CDS | 25.0% |
| !! | AGATTTTTACTCAACTACTT+GGG | + | Chr2:66330376-66330395 | MsG0280010219.01.T01:CDS | 25.0% |
| !! | CTTTCATGTTCATTTTACTT+TGG | + | Chr2:66330251-66330270 | MsG0280010219.01.T01:CDS | 25.0% |
| !! | TTTTTATTGACCAAACTGAA+GGG | - | Chr2:66328933-66328952 | None:intergenic | 25.0% |
| !!! | TCTAAACTTTTGAAGTAAAG+AGG | - | Chr2:66329627-66329646 | None:intergenic | 25.0% |
| !!! | TTTTTTATTGACCAAACTGA+AGG | - | Chr2:66328934-66328953 | None:intergenic | 25.0% |
| AACAGCAAAAACTTTGTGTT+TGG | + | Chr2:66329891-66329910 | MsG0280010219.01.T01:CDS | 30.0% | |
| AACTTTGTGTTTGGATATGT+TGG | + | Chr2:66329900-66329919 | MsG0280010219.01.T01:CDS | 30.0% | |
| AATGGATATGGAGATTATCA+TGG | + | Chr2:66329698-66329717 | MsG0280010219.01.T01:CDS | 30.0% | |
| ACATGATAGTAAACTGTGTT+TGG | - | Chr2:66328127-66328146 | None:intergenic | 30.0% | |
| AGCAAACTATAGTTATCGTT+TGG | + | Chr2:66328456-66328475 | MsG0280010219.01.T01:CDS | 30.0% | |
| AGCTGTAAGGATTATAACAA+TGG | + | Chr2:66329944-66329963 | MsG0280010219.01.T01:CDS | 30.0% | |
| AGTGACTATTGGATTGAAAA+AGG | + | Chr2:66328754-66328773 | MsG0280010219.01.T01:CDS | 30.0% | |
| AGTTTCAACAGAATTCATCT+TGG | + | Chr2:66330135-66330154 | MsG0280010219.01.T01:CDS | 30.0% | |
| ATGATGTCAATTCTCACAAT+GGG | + | Chr2:66329816-66329835 | MsG0280010219.01.T01:CDS | 30.0% | |
| ATTTCATGATGCCAATGAAA+TGG | - | Chr2:66328855-66328874 | None:intergenic | 30.0% | |
| ATTTCTTAACTCTTTCAAGC+TGG | - | Chr2:66329086-66329105 | None:intergenic | 30.0% | |
| CATCATGAAAATTGAGATGA+AGG | - | Chr2:66329802-66329821 | None:intergenic | 30.0% | |
| CCATATATGATGTCTTTGAA+AGG | + | Chr2:66328670-66328689 | MsG0280010219.01.T01:CDS | 30.0% | |
| CCTTTCAAAGACATCATATA+TGG | - | Chr2:66328673-66328692 | None:intergenic | 30.0% | |
| GGAAACATCATTAGAGAAAT+TGG | - | Chr2:66328433-66328452 | None:intergenic | 30.0% | |
| GTAAAAATCTGCATTAGGAT+TGG | - | Chr2:66330366-66330385 | None:intergenic | 30.0% | |
| GTTATCATCTTGAAGTAGTT+TGG | - | Chr2:66329006-66329025 | None:intergenic | 30.0% | |
| GTTGAGTAAAAATCTGCATT+AGG | - | Chr2:66330371-66330390 | None:intergenic | 30.0% | |
| GTTTCAACAGAATTCATCTT+GGG | + | Chr2:66330136-66330155 | MsG0280010219.01.T01:CDS | 30.0% | |
| TAGAAATTTCGAAGATGACA+GGG | + | Chr2:66329029-66329048 | MsG0280010219.01.T01:CDS | 30.0% | |
| TCATAGATTCAAAGGATCAA+AGG | + | Chr2:66330481-66330500 | MsG0280010219.01.T01:CDS | 30.0% | |
| TTAGAAATTTCGAAGATGAC+AGG | + | Chr2:66329028-66329047 | MsG0280010219.01.T01:CDS | 30.0% | |
| TTGTAACTTTCAAGCTTGAA+GGG | + | Chr2:66328209-66328228 | MsG0280010219.01.T01:CDS | 30.0% | |
| TTTGATCCTTTGAATCTATG+AGG | - | Chr2:66330482-66330501 | None:intergenic | 30.0% | |
| TTTGTAACTTTCAAGCTTGA+AGG | + | Chr2:66328208-66328227 | MsG0280010219.01.T01:CDS | 30.0% | |
| ! | AACATCACTAGTTTGATTAG+TGG | + | Chr2:66328352-66328371 | MsG0280010219.01.T01:CDS | 30.0% |
| ! | AAGTGATGTTTCTGAGAAAA+AGG | + | Chr2:66328513-66328532 | MsG0280010219.01.T01:CDS | 30.0% |
| ! | AGGATCAAAGGTATATGAAA+AGG | + | Chr2:66330493-66330512 | MsG0280010219.01.T01:CDS | 30.0% |
| ! | AGTGATGTTTCTGAGAAAAA+GGG | + | Chr2:66328514-66328533 | MsG0280010219.01.T01:CDS | 30.0% |
| ! | ATCTTCTGGAAAAGTTTGTA+TGG | + | Chr2:66328243-66328262 | MsG0280010219.01.T01:CDS | 30.0% |
| ! | CAGATTTTTACTCAACTACT+TGG | + | Chr2:66330375-66330394 | MsG0280010219.01.T01:CDS | 30.0% |
| !!! | CGATAACTATAGTTTGCTTT+TGG | - | Chr2:66328454-66328473 | None:intergenic | 30.0% |
| AAAGTTTGTATGGTTGGAAC+AGG | + | Chr2:66328253-66328272 | MsG0280010219.01.T01:CDS | 35.0% | |
| AAGACTAATGAAAGCCAGAA+CGG | + | Chr2:66330017-66330036 | MsG0280010219.01.T01:CDS | 35.0% | |
| AATAATCCAGCTGCATACAA+AGG | - | Chr2:66330083-66330102 | None:intergenic | 35.0% | |
| AATGGAAGCTACGACATTAA+AGG | + | Chr2:66329570-66329589 | MsG0280010219.01.T01:CDS | 35.0% | |
| ACAAGGTTGTCAAGAACAAA+GGG | + | Chr2:66329118-66329137 | MsG0280010219.01.T01:CDS | 35.0% | |
| ACCAAGTTAGTTGAAGAAGA+CGG | - | Chr2:66329989-66330008 | None:intergenic | 35.0% | |
| ACTCATGAGTGTACTCTAAT+CGG | - | Chr2:66328606-66328625 | None:intergenic | 35.0% | |
| ACTCGTAATTATGCTCAACT+CGG | + | Chr2:66330320-66330339 | MsG0280010219.01.T01:CDS | 35.0% | |
| ACTTGATCACCAACAGATAA+AGG | - | Chr2:66329240-66329259 | None:intergenic | 35.0% | |
| ATAATCCAGCTGCATACAAA+GGG | - | Chr2:66330082-66330101 | None:intergenic | 35.0% | |
| ATCATGAAATCGTCCTTGAA+TGG | + | Chr2:66328865-66328884 | MsG0280010219.01.T01:CDS | 35.0% | |
| CACTGAATTCCGGTTATATA+AGG | - | Chr2:66329376-66329395 | None:intergenic | 35.0% | |
| CATGATGTCAATTCTCACAA+TGG | + | Chr2:66329815-66329834 | MsG0280010219.01.T01:CDS | 35.0% | |
| CATGTAAGCAACTTTAGCTA+TGG | + | Chr2:66328142-66328161 | MsG0280010219.01.T01:CDS | 35.0% | |
| CCATCATTGGATGCAAAAAA+TGG | + | Chr2:66329552-66329571 | MsG0280010219.01.T01:CDS | 35.0% | |
| GAAGTTTCAGTTTCCATCAT+TGG | + | Chr2:66329539-66329558 | MsG0280010219.01.T01:CDS | 35.0% | |
| GAGTCCAATATTAACTCCTA+TGG | + | Chr2:66329204-66329223 | MsG0280010219.01.T01:CDS | 35.0% | |
| GATTGAAATTCCCTTCAGTT+TGG | + | Chr2:66328920-66328939 | MsG0280010219.01.T01:CDS | 35.0% | |
| GGCAATTGATCACTCATTAT+AGG | - | Chr2:66328652-66328671 | None:intergenic | 35.0% | |
| GTCTGTTGTGGAATTTGAAA+TGG | - | Chr2:66329280-66329299 | None:intergenic | 35.0% | |
| GTTCTCAAGAAAACAAGCAT+AGG | + | Chr2:66328701-66328720 | MsG0280010219.01.T01:CDS | 35.0% | |
| TAAAGGAGCTGAAAAACCAT+AGG | - | Chr2:66329223-66329242 | None:intergenic | 35.0% | |
| TCTGGAAAAGTTTGTATGGT+TGG | + | Chr2:66328247-66328266 | MsG0280010219.01.T01:CDS | 35.0% | |
| TGGGAGAACATGAAATCTTA+CGG | + | Chr2:66330155-66330174 | MsG0280010219.01.T01:CDS | 35.0% | |
| TGGGATATTGTCATTCCTTT+GGG | + | Chr2:66330395-66330414 | MsG0280010219.01.T01:CDS | 35.0% | |
| TTGGGATATTGTCATTCCTT+TGG | + | Chr2:66330394-66330413 | MsG0280010219.01.T01:CDS | 35.0% | |
| TTGTGTTTGGATATGTTGGA+TGG | + | Chr2:66329904-66329923 | MsG0280010219.01.T01:CDS | 35.0% | |
| TTTCAATCCGAAAACTACGT+TGG | + | Chr2:66328777-66328796 | MsG0280010219.01.T01:CDS | 35.0% | |
| ! | AGAAAACAAGCATAGGTTGA+AGG | + | Chr2:66328708-66328727 | MsG0280010219.01.T01:CDS | 35.0% |
| ! | GTGGAATTTGAAATGGTAAC+AGG | - | Chr2:66329273-66329292 | None:intergenic | 35.0% |
| ! | TTTTCAGCTCCTTTATCTGT+TGG | + | Chr2:66329228-66329247 | MsG0280010219.01.T01:CDS | 35.0% |
| !! | AGAGAGTTTGAGTTCTGAAA+AGG | + | Chr2:66328381-66328400 | MsG0280010219.01.T01:CDS | 35.0% |
| !! | CAGAAGGTACTTATGATTCA+AGG | + | Chr2:66329430-66329449 | MsG0280010219.01.T01:CDS | 35.0% |
| !! | GAGAGTTTGAGTTCTGAAAA+GGG | + | Chr2:66328382-66328401 | MsG0280010219.01.T01:CDS | 35.0% |
| !!! | CCATTTTTTGCATCCAATGA+TGG | - | Chr2:66329555-66329574 | None:intergenic | 35.0% |
| AAACAGCGATAGAAGCTGTT+TGG | + | Chr2:66329673-66329692 | MsG0280010219.01.T01:CDS | 40.0% | |
| AATCCGAAAACTACGTTGGT+AGG | + | Chr2:66328781-66328800 | MsG0280010219.01.T01:CDS | 40.0% | |
| AATTTCGAAGATGACAGGGT+TGG | + | Chr2:66329033-66329052 | MsG0280010219.01.T01:CDS | 40.0% | |
| ACAGGAACCTTGTGTATGAT+TGG | + | Chr2:66329453-66329472 | MsG0280010219.01.T01:CDS | 40.0% | |
| ACGAGTCCTGTAAAGATCAT+AGG | - | Chr2:66330306-66330325 | None:intergenic | 40.0% | |
| AGAGTGAAGATTTCAGCAGA+AGG | + | Chr2:66329414-66329433 | MsG0280010219.01.T01:CDS | 40.0% | |
| AGCTGTTTGGAGAATGGATA+TGG | + | Chr2:66329686-66329705 | MsG0280010219.01.T01:CDS | 40.0% | |
| ATCAGAAGCTGAAGTGCAAA+TGG | + | Chr2:66330532-66330551 | MsG0280010219.01.T01:CDS | 40.0% | |
| ATCCGAAAACTACGTTGGTA+GGG | + | Chr2:66328782-66328801 | MsG0280010219.01.T01:CDS | 40.0% | |
| CACAAGGTTGTCAAGAACAA+AGG | + | Chr2:66329117-66329136 | MsG0280010219.01.T01:CDS | 40.0% | |
| CATGAAATCTTACGGTGGTT+TGG | + | Chr2:66330163-66330182 | MsG0280010219.01.T01:CDS | 40.0% | |
| CCATTGTTGAACATCACCAT+AGG | - | Chr2:66329306-66329325 | None:intergenic | 40.0% | |
| CTGTAAAGATCATAGGCATG+CGG | - | Chr2:66330299-66330318 | None:intergenic | 40.0% | |
| CTTCTAATAGCTCTTGAGAG+TGG | - | Chr2:66328580-66328599 | None:intergenic | 40.0% | |
| GAGAACATGAAATCTTACGG+TGG | + | Chr2:66330158-66330177 | MsG0280010219.01.T01:CDS | 40.0% | |
| GATAGAAGCTGTTTGGAGAA+TGG | + | Chr2:66329680-66329699 | MsG0280010219.01.T01:CDS | 40.0% | |
| GATATTGTCATTCCTTTGGG+AGG | + | Chr2:66330398-66330417 | MsG0280010219.01.T01:CDS | 40.0% | |
| GCAAATAAGATACCTCCCAA+AGG | - | Chr2:66330413-66330432 | None:intergenic | 40.0% | |
| GCTTCGAAATTGAGAACAAG+CGG | - | Chr2:66329852-66329871 | None:intergenic | 40.0% | |
| GGTACTTATGATTCAAGGAC+AGG | + | Chr2:66329435-66329454 | MsG0280010219.01.T01:CDS | 40.0% | |
| GTTCTGCCTCATAGATTCAA+AGG | + | Chr2:66330473-66330492 | MsG0280010219.01.T01:CDS | 40.0% | |
| TCCGTCTTCTTCAACTAACT+TGG | + | Chr2:66329985-66330004 | MsG0280010219.01.T01:CDS | 40.0% | |
| TTGCCGCAATCTTAACTCAA+AGG | + | Chr2:66329476-66329495 | MsG0280010219.01.T01:CDS | 40.0% | |
| ! | ACTCTAGCATGTGTTTTCGT+CGG | + | Chr2:66329735-66329754 | MsG0280010219.01.T01:CDS | 40.0% |
| ! | AGATGAAGGGAAGCACATTA+GGG | - | Chr2:66329788-66329807 | None:intergenic | 40.0% |
| ! | ATCTACTTGCAGCAACGTTT+TGG | + | Chr2:66330440-66330459 | MsG0280010219.01.T01:CDS | 40.0% |
| ! | ATTTTCCCTTTGTATGCAGC+TGG | + | Chr2:66330074-66330093 | MsG0280010219.01.T01:CDS | 40.0% |
| ! | CAGCCTTTGAGTTAAGATTG+CGG | - | Chr2:66329482-66329501 | None:intergenic | 40.0% |
| ! | CATTAGGGTGTTTCTTGACA+TGG | - | Chr2:66329773-66329792 | None:intergenic | 40.0% |
| ! | CCTATGGTGATGTTCAACAA+TGG | + | Chr2:66329303-66329322 | MsG0280010219.01.T01:CDS | 40.0% |
| ! | CTTTCAAGCTTGAAGGGTTT+TGG | + | Chr2:66328215-66328234 | MsG0280010219.01.T01:CDS | 40.0% |
| ! | GCATAGGTTGAAGGTTATGA+TGG | + | Chr2:66328717-66328736 | MsG0280010219.01.T01:CDS | 40.0% |
| ! | GTAGTTGCTTGCCATTTCAT+TGG | + | Chr2:66328841-66328860 | MsG0280010219.01.T01:CDS | 40.0% |
| !! | AAGGAAGTATCAAAAGCACG+CGG | + | Chr2:66329589-66329608 | MsG0280010219.01.T01:CDS | 40.0% |
| !! | AGCAGTTCTGAATGAAACAG+TGG | - | Chr2:66328104-66328123 | None:intergenic | 40.0% |
| !! | ATCTTACGGTGGTTTGGTAT+TGG | + | Chr2:66330169-66330188 | MsG0280010219.01.T01:CDS | 40.0% |
| !! | GGGTTTTGGTCAAAATCTTC+TGG | + | Chr2:66328229-66328248 | MsG0280010219.01.T01:CDS | 40.0% |
| AATTATGCTCAACTCGGCGA+TGG | + | Chr2:66330326-66330345 | MsG0280010219.01.T01:CDS | 45.0% | |
| CGCAATCTTAACTCAAAGGC+TGG | + | Chr2:66329480-66329499 | MsG0280010219.01.T01:CDS | 45.0% | |
| CGCATGCCTATGATCTTTAC+AGG | + | Chr2:66330297-66330316 | MsG0280010219.01.T01:CDS | 45.0% | |
| GAAATCATGTCCAGCACACA+AGG | + | Chr2:66329101-66329120 | MsG0280010219.01.T01:CDS | 45.0% | |
| TTCCACAACAGACACTCCTA+TGG | + | Chr2:66329287-66329306 | MsG0280010219.01.T01:CDS | 45.0% | |
| TTCTTGACAACCTTGTGTGC+TGG | - | Chr2:66329114-66329133 | None:intergenic | 45.0% | |
| ! | AAAACTACGTTGGTAGGGGA+AGG | + | Chr2:66328787-66328806 | MsG0280010219.01.T01:CDS | 45.0% |
| ! | GAGATGAAGGGAAGCACATT+AGG | - | Chr2:66329789-66329808 | None:intergenic | 45.0% |
| ! | TCCCCTACCAACGTAGTTTT+CGG | - | Chr2:66328787-66328806 | None:intergenic | 45.0% |
| ! | TCCGAAAACTACGTTGGTAG+GGG | + | Chr2:66328783-66328802 | MsG0280010219.01.T01:CDS | 45.0% |
| !! | GGTATATGAAAAGGTGCCTG+TGG | + | Chr2:66330502-66330521 | MsG0280010219.01.T01:CDS | 45.0% |
| !! | TACGGTGGTTTGGTATTGGA+TGG | + | Chr2:66330173-66330192 | MsG0280010219.01.T01:CDS | 45.0% |
| CCTCTGGATTGCTGAGAGAA+AGG | + | Chr2:66330040-66330059 | MsG0280010219.01.T01:CDS | 50.0% | |
| CCTTTCTCTCAGCAATCCAG+AGG | - | Chr2:66330043-66330062 | None:intergenic | 50.0% | |
| GCGGCAACCAATCATACACA+AGG | - | Chr2:66329463-66329482 | None:intergenic | 50.0% | |
| GCTTCTGATTCAGTCACCAC+AGG | - | Chr2:66330521-66330540 | None:intergenic | 50.0% | |
| TCCTTGAATGGCATCCGTCT+TGG | + | Chr2:66328877-66328896 | MsG0280010219.01.T01:CDS | 50.0% | |
| TGGAACACAGTTACGCTCTG+TGG | + | Chr2:66329500-66329519 | MsG0280010219.01.T01:CDS | 50.0% | |
| TTACCGAGCAATCGCCAAGA+CGG | - | Chr2:66328894-66328913 | None:intergenic | 50.0% | |
| !! | CACCATAGGAGTGTCTGTTG+TGG | - | Chr2:66329292-66329311 | None:intergenic | 50.0% |
| !! | TGACGCTGACTTCGAGAACT+TGG | - | Chr2:66328175-66328194 | None:intergenic | 50.0% |
| ATGAAAGCCAGAACGGCCTC+TGG | + | Chr2:66330024-66330043 | MsG0280010219.01.T01:CDS | 55.0% | |
| CATCCGTCTTGGCGATTGCT+CGG | + | Chr2:66328888-66328907 | MsG0280010219.01.T01:CDS | 55.0% | |
| GCCAAGACGGATGCCATTCA+AGG | - | Chr2:66328881-66328900 | None:intergenic | 55.0% | |
| ! | CTACGTTGGTAGGGGAAGGT+TGG | + | Chr2:66328791-66328810 | MsG0280010219.01.T01:CDS | 55.0% |
| ! | GTTGGTAGGGGAAGGTTGGT+GGG | + | Chr2:66328795-66328814 | MsG0280010219.01.T01:CDS | 55.0% |
| CAGCAATCCAGAGGCCGTTC+TGG | - | Chr2:66330034-66330053 | None:intergenic | 60.0% | |
| ! | CGTTGGTAGGGGAAGGTTGG+TGG | + | Chr2:66328794-66328813 | MsG0280010219.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 66328061 | 66330559 | 66328061 | ID=MsG0280010219.01;Name=MsG0280010219.01 |
| Chr2 | mRNA | 66328061 | 66330559 | 66328061 | ID=MsG0280010219.01.T01;Parent=MsG0280010219.01;Name=MsG0280010219.01.T01;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|832 |
| Chr2 | exon | 66328061 | 66330559 | 66328061 | ID=MsG0280010219.01.T01:exon:5296;Parent=MsG0280010219.01.T01 |
| Chr2 | CDS | 66328061 | 66330559 | 66328061 | ID=MsG0280010219.01.T01:cds;Parent=MsG0280010219.01.T01 |
| Gene Sequence |
| Protein sequence |
