AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015217.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015217.01.T01 MTR_3g065250 76.584 363 32 5 149 490 26 356 0.0 535
MsG0380015217.01.T01 MTR_6g071070 68.785 362 62 5 149 490 26 356 1.39e-172 489
MsG0380015217.01.T01 MTR_5g077950 66.942 363 67 5 149 490 27 357 4.23e-165 471
MsG0380015217.01.T01 MTR_2g021255 62.983 362 83 5 149 490 82 412 2.81e-153 443
MsG0380015217.01.T01 MTR_2g021242 60.221 362 93 5 149 490 82 412 8.06e-147 427
MsG0380015217.01.T01 MTR_2g021255 62.462 333 74 5 149 461 82 383 4.99e-134 393
MsG0380015217.01.T01 MTR_6g048560 67.021 94 30 1 1 93 90 183 1.24e-33 127
MsG0380015217.01.T01 MTR_5g021380 59.574 94 37 1 1 93 727 820 4.80e-29 122
MsG0380015217.01.T01 MTR_8g062840 58.000 100 29 2 391 490 1 87 3.87e-28 109
MsG0380015217.01.T01 MTR_6g035290 59.756 82 32 1 13 93 4 85 1.68e-27 105
MsG0380015217.01.T01 MTR_6g024380 67.073 82 26 1 13 93 192 273 1.38e-25 109
MsG0380015217.01.T01 MTR_7g057470 51.020 98 47 1 1 97 423 520 1.67e-25 110
MsG0380015217.01.T01 MTR_7g057490 51.020 98 47 1 1 97 423 520 1.67e-25 110
MsG0380015217.01.T01 MTR_6g045623 55.789 95 41 1 1 94 233 327 5.07e-25 106
MsG0380015217.01.T01 MTR_7g083690 52.632 95 44 1 1 94 805 899 2.04e-23 104
MsG0380015217.01.T01 MTR_2g067570 48.454 97 47 2 1 94 147 243 1.07e-20 92.4
MsG0380015217.01.T01 MTR_3g058910 61.644 73 27 1 23 94 1 73 2.07e-18 85.9
MsG0380015217.01.T01 MTR_7g033825 47.959 98 29 2 1 97 477 553 3.08e-17 85.1
MsG0380015217.01.T01 MTR_2g021248 39.706 136 31 4 355 489 14 99 3.30e-17 82.8
MsG0380015217.01.T01 MTR_3g068195 46.809 94 34 2 1 93 76 154 8.11e-16 80.5
MsG0380015217.01.T01 MTR_6g016175 60.294 68 26 1 1 67 220 287 1.25e-15 80.1
MsG0380015217.01.T01 MTR_3g026390 72.500 40 11 0 1 40 128 167 3.57e-13 67.8
MsG0380015217.01.T01 MTR_1g018785 78.378 37 8 0 1 37 198 234 2.01e-11 64.7
MsG0380015217.01.T01 MTR_7g107070 72.973 37 10 0 1 37 69 105 5.61e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015217.01.T01 AT5G16570 71.547 362 52 5 149 490 26 356 8.40e-176 498
MsG0380015217.01.T01 AT1G66200 69.613 362 59 5 149 490 26 356 1.91e-175 497
MsG0380015217.01.T01 AT5G37600 69.337 362 60 5 149 490 26 356 1.35e-174 495
MsG0380015217.01.T01 AT1G66200 67.925 371 59 6 149 490 26 365 1.55e-172 490
MsG0380015217.01.T01 AT3G17820 67.222 360 65 5 149 487 26 353 7.41e-165 470
MsG0380015217.01.T01 AT1G48470 63.056 360 80 5 149 487 26 353 2.94e-155 446
MsG0380015217.01.T01 AT5G35630 61.326 362 89 5 149 490 84 414 8.07e-148 429
MsG0380015217.01.T01 AT5G35630 61.326 362 89 5 149 490 84 414 8.07e-148 429
MsG0380015217.01.T01 AT5G35630 61.326 362 89 5 149 490 84 414 8.07e-148 429
MsG0380015217.01.T01 AT1G66200 62.016 258 47 5 149 386 26 252 5.44e-101 304
MsG0380015217.01.T01 AT5G16570 62.041 245 42 5 149 373 26 239 4.29e-89 273

Find 174 sgRNAs with CRISPR-Local

Find 650 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGCAAACCTTAATTGGTTT+TGG 0.177125 3:+66967310 None:intergenic
CTTTGACCCAAAACCAATTA+AGG 0.180257 3:-66967317 MsG0380015217.01.T01:intron
TGGAAATAGCAAACCTTAAT+TGG 0.180907 3:+66967304 None:intergenic
ATATTGTTACCCCTTCTAAA+TGG 0.232525 3:+66968822 None:intergenic
CTGACATTAACACCTTCTTA+TGG 0.238098 3:-66966903 MsG0380015217.01.T01:CDS
TCTAAATGGGTCCTTGAAAA+TGG 0.243688 3:+66968836 None:intergenic
TCTCCGGCAAATTATGAGTA+TGG 0.246255 3:+66974531 None:intergenic
TATCAGTTGATGAAGAAAAT+TGG 0.250798 3:-66974715 MsG0380015217.01.T01:CDS
GCGGGATGTCCGACCATTTC+CGG 0.258973 3:-66974745 None:intergenic
GTTGATTCCGCATTAGAATT+TGG 0.259893 3:-66966512 MsG0380015217.01.T01:three_prime_UTR
TTGGATTTGTGTTATTGTTA+TGG 0.290371 3:-66966470 MsG0380015217.01.T01:three_prime_UTR
CCTTCTTCCCTCATGGTCAT+TGG 0.292176 3:+66966310 None:intergenic
ACTTTGTTTGTTTGAATTTG+AGG 0.300071 3:-66966442 MsG0380015217.01.T01:three_prime_UTR
AACTACTATAAATTTACTTA+TGG 0.305546 3:-66966265 MsG0380015217.01.T01:three_prime_UTR
ATCAGTTGATGAAGAAAATT+GGG 0.313940 3:-66974714 MsG0380015217.01.T01:CDS
TACACAATCATATAAGAAAA+TGG 0.315368 3:-66968006 MsG0380015217.01.T01:CDS
ATGTCTCTTGTTGGTGGGAA+TGG 0.316733 3:+66968314 None:intergenic
AAGGAGCACATTGCTGCTTA+TGG 0.324475 3:-66966967 MsG0380015217.01.T01:CDS
TAATGCAAAACTAGGGTGAT+TGG 0.338203 3:-66967180 MsG0380015217.01.T01:intron
TTGAATTTGAGGCCTGTTAT+AGG 0.340542 3:-66966431 MsG0380015217.01.T01:three_prime_UTR
ATGAAGAAAATTGGGGTCTT+AGG 0.348466 3:-66974706 MsG0380015217.01.T01:CDS
TGGGATACTGATAGCTAATA+AGG 0.358982 3:-66973743 MsG0380015217.01.T01:CDS
TGACATTAACACCTTCTTAT+GGG 0.364511 3:-66966902 MsG0380015217.01.T01:intron
TAACAAATGGAAATCTCTTC+AGG 0.365553 3:-66974627 MsG0380015217.01.T01:CDS
AAAATTTAAATTACTTAAGA+AGG 0.376444 3:-66974576 MsG0380015217.01.T01:CDS
AGCTGTGAAGGGTCAGTAAC+TGG 0.376973 3:+66969053 None:intergenic
AGCACCAGCACCACATAGTA+TGG 0.377907 3:+66967786 None:intergenic
GGCAGCTGCATGTCTCTTGT+TGG 0.378014 3:+66968305 None:intergenic
GTGGGAATGGGCTCTCCAGC+TGG 0.380314 3:+66968327 None:intergenic
CATGTGTGTGTGGTGGCTTA+TGG 0.383641 3:+66966558 None:intergenic
TATGTCAGGATTGGTGGATC+TGG 0.389845 3:-66969225 MsG0380015217.01.T01:intron
CTGATAACACCAACCGGAAA+TGG 0.391537 3:+66974732 None:intergenic
AAAGATTGGCAGATTCTTGA+TGG 0.398347 3:-66973763 MsG0380015217.01.T01:intron
AGAAATATGAAACCTATAAC+AGG 0.404395 3:+66966419 None:intergenic
TTCTCCTCCCTTTACCATCA+AGG 0.407849 3:+66974477 None:intergenic
TGTCTCTTGTTGGTGGGAAT+GGG 0.409298 3:+66968315 None:intergenic
CAGGATTGGTGGATCTGGTT+TGG 0.409454 3:-66969220 MsG0380015217.01.T01:CDS
GGAGAAGATTGCTTCTCTTA+AGG 0.409552 3:-66974513 MsG0380015217.01.T01:CDS
TGAAAGCAATTGAGAAGCTT+GGG 0.410163 3:-66966999 MsG0380015217.01.T01:CDS
ATCATGGAAGTAACAACATA+TGG 0.411129 3:+66966606 None:intergenic
TCCAGGAGCTTGACCTGTGC+TGG 0.411245 3:+66969007 None:intergenic
AACAATTTGTCAGTAACAAA+TGG 0.415400 3:-66974640 MsG0380015217.01.T01:CDS
GACAGGTTGGCCGCCCTTGA+TGG 0.417060 3:-66974491 MsG0380015217.01.T01:CDS
TAGAAGGGGTAACAATATCT+TGG 0.417590 3:-66968817 MsG0380015217.01.T01:intron
CTGGTGCTCACACAAATTAC+AGG 0.417888 3:-66967150 MsG0380015217.01.T01:intron
AAAGACATCAATTGGCCTCT+TGG 0.419531 3:-66968118 MsG0380015217.01.T01:CDS
CCCTCAGTTGGTATCTCTGC+TGG 0.420001 3:-66967532 MsG0380015217.01.T01:intron
TTGAAAGCAATTGAGAAGCT+TGG 0.420009 3:-66967000 MsG0380015217.01.T01:CDS
GGCAACGAGCGTAGATTGAC+AGG 0.421220 3:-66966940 MsG0380015217.01.T01:CDS
ATTCCTGCCTTCTTCCCTCA+TGG 0.426313 3:+66966303 None:intergenic
TAGAGGATCACTGAGGTTGC+TGG 0.429246 3:-66967352 MsG0380015217.01.T01:CDS
GCTGGTGCTGACAAGGCATT+TGG 0.430707 3:-66967772 MsG0380015217.01.T01:CDS
AGCTAATAAGGTGGTGGATG+AGG 0.439135 3:-66973731 MsG0380015217.01.T01:CDS
TGGAAATCTCTTCAGGTAAC+GGG 0.439788 3:-66974620 MsG0380015217.01.T01:CDS
TGTCCTTGTGACTGCTCAAT+TGG 0.444586 3:+66966143 None:intergenic
ATCAGGATGGCTGAAAATCT+TGG 0.445473 3:+66968284 None:intergenic
TATTGTTACCCCTTCTAAAT+GGG 0.446639 3:+66968823 None:intergenic
ATTACTTAAGAAGGCGTTGA+AGG 0.447400 3:-66974567 MsG0380015217.01.T01:CDS
TTTGTGGAGGAAGTGGATTA+AGG 0.450300 3:-66973596 MsG0380015217.01.T01:CDS
AAGGGAGGAGAAGGAGTTGT+CGG 0.456255 3:-66974466 MsG0380015217.01.T01:CDS
GTTCATTATGTCAGGATTGG+TGG 0.459850 3:-66969231 MsG0380015217.01.T01:intron
GTGGATCTGGTTTGGACTTG+AGG 0.460278 3:-66969212 MsG0380015217.01.T01:CDS
TCTCTTCAGGTAACGGGATG+TGG 0.460781 3:-66974614 MsG0380015217.01.T01:CDS
GGCTTATGGTTTCCAGAGAA+TGG 0.461165 3:+66966572 None:intergenic
TTCCGACTTTGTGGAGGAAG+TGG 0.461782 3:-66973603 MsG0380015217.01.T01:CDS
CCTCTTGGTTGGCCAGTTGG+TGG 0.462411 3:-66968103 MsG0380015217.01.T01:CDS
AGCTGCATGTCTCTTGTTGG+TGG 0.467488 3:+66968308 None:intergenic
AATGGTGGTGTCTGCAATCA+TGG 0.470051 3:+66966590 None:intergenic
ATCCCATACTCATAATTTGC+CGG 0.470761 3:-66974534 MsG0380015217.01.T01:CDS
TCCAGCACAGGTCAAGCTCC+TGG 0.473336 3:-66969008 MsG0380015217.01.T01:CDS
TTGCAGACACCACCATTCTC+TGG 0.481231 3:-66966584 MsG0380015217.01.T01:CDS
TGGCCTCTTGGTTGGCCAGT+TGG 0.482222 3:-66968106 MsG0380015217.01.T01:CDS
AGATTGCTTCTCTTAAGGAC+AGG 0.483844 3:-66974508 MsG0380015217.01.T01:CDS
AACTATGATGGTTCCAGCAC+AGG 0.485647 3:-66969020 MsG0380015217.01.T01:CDS
TGGCCGCCCTTGATGGTAAA+GGG 0.486171 3:-66974484 MsG0380015217.01.T01:CDS
TTGTGCAGAAAGACATCAAT+TGG 0.486896 3:-66968126 MsG0380015217.01.T01:CDS
GGTACTTCAGCAACAACATC+AGG 0.488296 3:+66968267 None:intergenic
TTATTTGCTTACCCATAAGA+AGG 0.490705 3:+66966891 None:intergenic
GGTCCTTGAAAATGGCTTGT+GGG 0.493819 3:+66968844 None:intergenic
TTCCACTTGGGAAGCTGTGA+AGG 0.498232 3:+66969041 None:intergenic
CCTCTCGAATGTTGAAATGC+TGG 0.504078 3:-66974682 MsG0380015217.01.T01:CDS
ACATCAATTGGCCTCTTGGT+TGG 0.505676 3:-66968114 MsG0380015217.01.T01:CDS
CCAATGACCATGAGGGAAGA+AGG 0.505889 3:-66966310 MsG0380015217.01.T01:three_prime_UTR
CATCAACTGATAACACCAAC+CGG 0.507179 3:+66974726 None:intergenic
TCTCCTCCCTTTACCATCAA+GGG 0.507457 3:+66974478 None:intergenic
TGCTTCTCTTAAGGACAGGT+TGG 0.512511 3:-66974504 MsG0380015217.01.T01:CDS
GGAAGGGACACAGAGAAAGC+AGG 0.514679 3:-66966672 MsG0380015217.01.T01:CDS
ATCAACATCAGTGGAATCAA+TGG 0.515689 3:-66967705 MsG0380015217.01.T01:intron
CTTCCCAAGTGGAACTATGA+TGG 0.516245 3:-66969032 MsG0380015217.01.T01:CDS
GGAAAGGTTATTTCGAGGAT+AGG 0.519246 3:-66966650 MsG0380015217.01.T01:CDS
TTGGCCGCCCTTGATGGTAA+AGG 0.520581 3:-66974485 MsG0380015217.01.T01:CDS
CACATTGCTGCTTATGGAGA+AGG 0.521068 3:-66966961 MsG0380015217.01.T01:CDS
ACCAAGTCTATGAGAGAAGA+TGG 0.523810 3:-66967039 MsG0380015217.01.T01:CDS
ATGGAAATCTCTTCAGGTAA+CGG 0.524241 3:-66974621 MsG0380015217.01.T01:CDS
TTAAGAGAAGCAATCTTCTC+CGG 0.526278 3:+66974515 None:intergenic
ACCATTGACTAACACGGAAA+CGG 0.526776 3:+66973555 None:intergenic
TTTCAAGGACCCATTTAGAA+GGG 0.527758 3:-66968832 MsG0380015217.01.T01:CDS
CTCCGGCAAATTATGAGTAT+GGG 0.532590 3:+66974532 None:intergenic
CTGACAAATTGTTTGTAACC+AGG 0.536238 3:+66974650 None:intergenic
TATGGATCCATGTTAGATGA+TGG 0.538723 3:+66966624 None:intergenic
GCTGCATGTCTCTTGTTGGT+GGG 0.539293 3:+66968309 None:intergenic
GGTCCAGGAAAACCACCAAC+TGG 0.540153 3:+66968091 None:intergenic
TGTTGATGCCGGCATAAGAC+AGG 0.547004 3:+66967721 None:intergenic
AAGATTGGCAGATTCTTGAT+GGG 0.550929 3:-66973762 MsG0380015217.01.T01:intron
TTCCAAGTTGGTCCCTCAGT+TGG 0.551503 3:-66967544 MsG0380015217.01.T01:CDS
CGTGGTGCGTCGATTAGAGT+TGG 0.552602 3:-66966693 MsG0380015217.01.T01:CDS
ATAACTTCACTATCTTCTCC+AGG 0.553474 3:+66968990 None:intergenic
GATCACTGAGGTTGCTGGTG+TGG 0.554625 3:-66967347 MsG0380015217.01.T01:CDS
CAGCATTTCAACATTCGAGA+GGG 0.554831 3:+66974683 None:intergenic
GATTCCACTGATGTTGATGC+CGG 0.555187 3:+66967710 None:intergenic
AGCAGGGAAAGGTTATTTCG+AGG 0.555891 3:-66966655 MsG0380015217.01.T01:CDS
AAGGTTATTTCGAGGATAGG+AGG 0.561130 3:-66966647 MsG0380015217.01.T01:CDS
CTTGTGACTGCTCAATTGGT+AGG 0.561136 3:+66966147 None:intergenic
TGACCATGAGGGAAGAAGGC+AGG 0.566416 3:-66966306 MsG0380015217.01.T01:three_prime_UTR
TGGACTTGAGGAGCAAAGCA+AGG 0.567464 3:-66969200 MsG0380015217.01.T01:CDS
TTAAGAAGGCGTTGAAGGAG+TGG 0.568391 3:-66974562 MsG0380015217.01.T01:CDS
GGGTCCTTGAAAATGGCTTG+TGG 0.569983 3:+66968843 None:intergenic
ACCATCTTCTCTCATAGACT+TGG 0.571470 3:+66967038 None:intergenic
GGAACCATCATAGTTCCACT+TGG 0.572427 3:+66969028 None:intergenic
ATGTGGTGCTGGTGCTGACA+AGG 0.575827 3:-66967779 MsG0380015217.01.T01:CDS
ACTGATAGCTAATAAGGTGG+TGG 0.579667 3:-66973737 MsG0380015217.01.T01:CDS
TGTGATGCATACACTCCAGC+TGG 0.581505 3:-66968342 MsG0380015217.01.T01:CDS
CCAGCATTTCAACATTCGAG+AGG 0.581870 3:+66974682 None:intergenic
TACCAACTGAGGGACCAACT+TGG 0.582203 3:+66967542 None:intergenic
TTCTCATATTATTACCACCA+TGG 0.583294 3:+66967978 None:intergenic
TTACAAAGCCTGTCTTATGC+CGG 0.583968 3:-66967729 MsG0380015217.01.T01:CDS
GTGCGTCGATTAGAGTTGGA+AGG 0.584013 3:-66966689 MsG0380015217.01.T01:CDS
ATGTAGTGGGAATTCCAAGT+TGG 0.586154 3:-66967556 MsG0380015217.01.T01:intron
GATTAAGGAGTGTGTAACTA+CGG 0.586282 3:-66973581 MsG0380015217.01.T01:CDS
TAGGGTGATTGGAATGGTGC+TGG 0.586935 3:-66967169 MsG0380015217.01.T01:CDS
TTGATGGTAAAGGGAGGAGA+AGG 0.588385 3:-66974475 MsG0380015217.01.T01:CDS
GATGTCCGACCATTTCCGGT+TGG 0.592042 3:-66974741 MsG0380015217.01.T01:CDS
TTCAAGGACCCATTTAGAAG+GGG 0.592622 3:-66968831 MsG0380015217.01.T01:CDS
GATGAGATCGTGGAGTTGCA+TGG 0.592644 3:-66974441 MsG0380015217.01.T01:intron
TCCACTTGGGAAGCTGTGAA+GGG 0.596916 3:+66969042 None:intergenic
GACACAGAGAAAGCAGGGAA+AGG 0.598045 3:-66966666 MsG0380015217.01.T01:CDS
GAAGGGTCAGTAACTGGACC+TGG 0.599215 3:+66969059 None:intergenic
GGGACCATACTATGTGGTGC+TGG 0.602505 3:-66967790 MsG0380015217.01.T01:CDS
ATCCACTTCCTCCACAAAGT+CGG 0.602694 3:+66973601 None:intergenic
ACCCTTCACAGCTTCCCAAG+TGG 0.605168 3:-66969043 MsG0380015217.01.T01:CDS
GGACTTGAGGAGCAAAGCAA+GGG 0.609551 3:-66969199 MsG0380015217.01.T01:intron
TAATGTGAGTCAACATGTCA+CGG 0.609826 3:+66967749 None:intergenic
CAACTCTAATCGACGCACCA+CGG 0.611739 3:+66966694 None:intergenic
TTCAATGCATGTGTGTGTGG+TGG 0.619576 3:+66966551 None:intergenic
TACTTCAATGCATGTGTGTG+TGG 0.619637 3:+66966548 None:intergenic
AATTGATGTCTTTCTGCACA+AGG 0.624575 3:+66968128 None:intergenic
TAGGAGGCCATCATCTAACA+TGG 0.627480 3:-66966631 MsG0380015217.01.T01:CDS
CAAAACTAGGGTGATTGGAA+TGG 0.637511 3:-66967175 MsG0380015217.01.T01:intron
TAACACCAACCGGAAATGGT+CGG 0.637821 3:+66974736 None:intergenic
GAAGGGACACAGAGAAAGCA+GGG 0.638354 3:-66966671 MsG0380015217.01.T01:CDS
TGCGTCGATTAGAGTTGGAA+GGG 0.644595 3:-66966688 MsG0380015217.01.T01:CDS
GTTGTCGGAAGATGAGATCG+TGG 0.648792 3:-66974451 MsG0380015217.01.T01:CDS
GAACCATCATAGTTCCACTT+GGG 0.652093 3:+66969029 None:intergenic
TATGCCGGCATCAACATCAG+TGG 0.653965 3:-66967714 MsG0380015217.01.T01:CDS
AAATGCTGGCAAGATACACC+TGG 0.654741 3:-66974668 MsG0380015217.01.T01:CDS
ACAATGACCAAATTCTAATG+CGG 0.661789 3:+66966505 None:intergenic
TTGAAGGGTGTTGCAAACCG+TGG 0.663350 3:-66966711 MsG0380015217.01.T01:intron
TTATGGTTTCCAGAGAATGG+TGG 0.667248 3:+66966575 None:intergenic
ACCAGCAGAGATACCAACTG+AGG 0.670459 3:+66967531 None:intergenic
CCACCAACTGGCCAACCAAG+AGG 0.671238 3:+66968103 None:intergenic
ATAAGAAAATGGTGTGACCA+TGG 0.675346 3:-66967995 MsG0380015217.01.T01:CDS
CTTCAGCAACAACATCAGGA+TGG 0.677550 3:+66968271 None:intergenic
TCAGTTGATGAAGAAAATTG+GGG 0.678085 3:-66974713 MsG0380015217.01.T01:CDS
CCAGCAGAGATACCAACTGA+GGG 0.678315 3:+66967532 None:intergenic
GATACTGATAGCTAATAAGG+TGG 0.681275 3:-66973740 MsG0380015217.01.T01:CDS
CCTCCCTTTACCATCAAGGG+CGG 0.688071 3:+66974481 None:intergenic
TCAATAGGGACCATACTATG+TGG 0.691990 3:-66967796 MsG0380015217.01.T01:intron
GCAACGAGCGTAGATTGACA+GGG 0.702514 3:-66966939 MsG0380015217.01.T01:CDS
CCGCCCTTGATGGTAAAGGG+AGG 0.703464 3:-66974481 MsG0380015217.01.T01:CDS
ATGTTGTTGCTGAAGTACCA+TGG 0.706598 3:-66968263 MsG0380015217.01.T01:intron
GAAGCTTGGGAAGAAGCACA+AGG 0.711059 3:-66966986 MsG0380015217.01.T01:CDS
AAGTCTATGAGAGAAGATGG+TGG 0.739470 3:-66967036 MsG0380015217.01.T01:CDS
AGAAAATGGTGTGACCATGG+TGG 0.764860 3:-66967992 MsG0380015217.01.T01:intron
GTTCCAATAGAGGATCACTG+AGG 0.789699 3:-66967359 MsG0380015217.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATATTATTTTTTTTTT+TGG - Chr3:66967960-66967979 MsG0380015217.01.T01:intron 0.0%
!!! ATAATATTATTTTTTTTTTT+GGG - Chr3:66967961-66967980 MsG0380015217.01.T01:intron 0.0%
!! AAAATTTAAATTACTTAAGA+AGG - Chr3:66966318-66966337 MsG0380015217.01.T01:three_prime_UTR 10.0%
!!! AAATGACAATATTTTAAAAA+TGG - Chr3:66969411-66969430 MsG0380015217.01.T01:intron 10.0%
!!! AATCAACAATAATTATTTTA+CGG + Chr3:66974545-66974564 None:intergenic 10.0%
!!! ATATTATGATTTTACTTATT+TGG - Chr3:66972010-66972029 MsG0380015217.01.T01:intron 10.0%
!!! CTAATTTTTCTTTTTATTTT+TGG - Chr3:66970015-66970034 MsG0380015217.01.T01:intron 10.0%
!!! TATTATGATTTTACTTATTT+GGG - Chr3:66972011-66972030 MsG0380015217.01.T01:intron 10.0%
!!! TTAAACAAATTTAAAACATT+AGG + Chr3:66972953-66972972 None:intergenic 10.0%
!!! TTTTTCATTAAATTAAACAT+AGG - Chr3:66973276-66973295 MsG0380015217.01.T01:intron 10.0%
!! AACAAATCTTTACATAATTA+AGG + Chr3:66971976-66971995 None:intergenic 15.0%
!! AACTACTATAAATTTACTTA+TGG - Chr3:66974629-66974648 MsG0380015217.01.T01:CDS 15.0%
!! AATGAACATAAATTAATCAA+AGG + Chr3:66971650-66971669 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+TGG + Chr3:66970090-66970109 None:intergenic 15.0%
!! AATTTAATTAAACACAAAAG+AGG + Chr3:66972523-66972542 None:intergenic 15.0%
!! ACAACAATAAACAAATAAAA+AGG - Chr3:66970390-66970409 MsG0380015217.01.T01:intron 15.0%
!! AGTAAATAATAAATGCTAAA+GGG + Chr3:66973251-66973270 None:intergenic 15.0%
!! ATGAACATAAATTAATCAAA+GGG + Chr3:66971649-66971668 None:intergenic 15.0%
!! ATTATTCAAAAGAAATTCTA+TGG + Chr3:66967946-66967965 None:intergenic 15.0%
!! ATTTAATTAAACACAAAAGA+GGG + Chr3:66972522-66972541 None:intergenic 15.0%
!! TAGTAAATAATAAATGCTAA+AGG + Chr3:66973252-66973271 None:intergenic 15.0%
!! TCATGAATAAAAAATAATCA+TGG + Chr3:66971166-66971185 None:intergenic 15.0%
!! TGTATAAAATAACATATTAG+TGG + Chr3:66969123-66969142 None:intergenic 15.0%
!!! AAAATATAAATGGCTTTTTT+TGG - Chr3:66971800-66971819 MsG0380015217.01.T01:intron 15.0%
!!! AAATATAAATGGCTTTTTTT+GGG - Chr3:66971801-66971820 MsG0380015217.01.T01:intron 15.0%
!!! AAATTTAAAACATTAGGTAT+GGG + Chr3:66972947-66972966 None:intergenic 15.0%
!!! AATATAAGAAGTATATCAAT+TGG + Chr3:66973665-66973684 None:intergenic 15.0%
!!! ATAGATTTTAAGTTGATTTT+GGG - Chr3:66971294-66971313 MsG0380015217.01.T01:intron 15.0%
!!! ATTATGATTTTACTTATTTG+GGG - Chr3:66972012-66972031 MsG0380015217.01.T01:intron 15.0%
!!! ATTTTTTTAATGCAAAACTA+GGG - Chr3:66973707-66973726 MsG0380015217.01.T01:intron 15.0%
!!! TAGTAATTTTGATACATTTA+AGG + Chr3:66972181-66972200 None:intergenic 15.0%
!!! TATAGATTTTAAGTTGATTT+TGG - Chr3:66971293-66971312 MsG0380015217.01.T01:intron 15.0%
!!! TATTGTTTTTTTAATGTAGT+GGG - Chr3:66973325-66973344 MsG0380015217.01.T01:intron 15.0%
!!! TATTTTATAATTGCTCAATA+GGG - Chr3:66973084-66973103 MsG0380015217.01.T01:intron 15.0%
!!! TATTTTTTTAATGCAAAACT+AGG - Chr3:66973706-66973725 MsG0380015217.01.T01:intron 15.0%
!!! TTATTTTATAATTGCTCAAT+AGG - Chr3:66973083-66973102 MsG0380015217.01.T01:intron 15.0%
!!! TTGTTTATTGTTGTTATTAT+TGG + Chr3:66970384-66970403 None:intergenic 15.0%
!!! TTTTGTGTTTAATTAAATTC+AGG - Chr3:66972524-66972543 MsG0380015217.01.T01:intron 15.0%
!!! TTTTTTGTTTGGAATAAAAT+TGG - Chr3:66971439-66971458 MsG0380015217.01.T01:intron 15.0%
!!! TTTTTTTTTTTAACATATGC+TGG - Chr3:66972110-66972129 MsG0380015217.01.T01:intron 15.0%
!! AAAAAATGTTTCTTTACCAA+AGG + Chr3:66968323-66968342 None:intergenic 20.0%
!! AAGAATTTAATATCATGGTT+TGG + Chr3:66971583-66971602 None:intergenic 20.0%
!! AATTGACCTATAATAAAATG+TGG - Chr3:66968669-66968688 MsG0380015217.01.T01:intron 20.0%
!! ATTGAAAGACTAATGTAATT+TGG - Chr3:66969739-66969758 MsG0380015217.01.T01:intron 20.0%
!! GAATATCAAGATAATAAATG+AGG - Chr3:66969436-66969455 MsG0380015217.01.T01:intron 20.0%
!! TAAACGTTAGAACTTATTTA+AGG + Chr3:66970486-66970505 None:intergenic 20.0%
!! TAATTTATGTTCATTATGTC+AGG - Chr3:66971655-66971674 MsG0380015217.01.T01:intron 20.0%
!! TACACAATCATATAAGAAAA+TGG - Chr3:66972888-66972907 MsG0380015217.01.T01:intron 20.0%
!! TAGAGAATAATGAATAGTAA+AGG + Chr3:66968586-66968605 None:intergenic 20.0%
!! TCCTAAAAATTTAAGAGTTT+AGG + Chr3:66970180-66970199 None:intergenic 20.0%
!! TGAACATAAATTAATCAAAG+GGG + Chr3:66971648-66971667 None:intergenic 20.0%
!! TTCAAACTTAGTAAAATCTA+AGG + Chr3:66970852-66970871 None:intergenic 20.0%
!!! AAATTTTTTACGGTTAAGAA+CGG + Chr3:66967798-66967817 None:intergenic 20.0%
!!! AATGACTTTGTTTTTTTGTT+TGG - Chr3:66971428-66971447 MsG0380015217.01.T01:intron 20.0%
!!! CAAATTTAAAACATTAGGTA+TGG + Chr3:66972948-66972967 None:intergenic 20.0%
!!! CTATTGTTTTTTTAATGTAG+TGG - Chr3:66973324-66973343 MsG0380015217.01.T01:intron 20.0%
!!! GACTATAGTTGAATTTTATA+TGG - Chr3:66973796-66973815 MsG0380015217.01.T01:intron 20.0%
!!! TATTATTTTTTTTTTTGGGG+AGG - Chr3:66967965-66967984 MsG0380015217.01.T01:intron 20.0%
!!! TATTTTTATGAAAGTACCTT+TGG - Chr3:66968304-66968323 MsG0380015217.01.T01:CDS 20.0%
!!! TCCTAAACTCTTAAATTTTT+AGG - Chr3:66970176-66970195 MsG0380015217.01.T01:intron 20.0%
!!! TGAAAATCATTTAAAGTTGA+GGG + Chr3:66967002-66967021 None:intergenic 20.0%
!!! TTGAAAATCATTTAAAGTTG+AGG + Chr3:66967003-66967022 None:intergenic 20.0%
!!! TTGTCTTTTGTTAATTAGTT+TGG - Chr3:66972246-66972265 MsG0380015217.01.T01:intron 20.0%
! AAACATCAAAAGTTTCTTCT+TGG + Chr3:66967198-66967217 None:intergenic 25.0%
! AAAGAGTTTGAATTCTACAA+TGG + Chr3:66968715-66968734 None:intergenic 25.0%
! AAATCGAACACAATGAATTA+CGG + Chr3:66966611-66966630 None:intergenic 25.0%
! AACAATTTGTCAGTAACAAA+TGG - Chr3:66966254-66966273 MsG0380015217.01.T01:three_prime_UTR 25.0%
! ACAAAGAAAAGTTAGTTAGT+TGG + Chr3:66973511-66973530 None:intergenic 25.0%
! ACAATTGAGGAAGTTTAATT+TGG - Chr3:66968070-66968089 MsG0380015217.01.T01:CDS 25.0%
! AGAAATATGAAACCTATAAC+AGG + Chr3:66974478-66974497 None:intergenic 25.0%
! AGAACAGAAAAAATCATCAT+GGG + Chr3:66971356-66971375 None:intergenic 25.0%
! AGAATAACTTGATTCAAACA+AGG + Chr3:66973616-66973635 None:intergenic 25.0%
! AGAATCTAACCATATGTATT+CGG + Chr3:66970955-66970974 None:intergenic 25.0%
! ATAAACTAGTGCAACAATTA+TGG - Chr3:66969820-66969839 MsG0380015217.01.T01:intron 25.0%
! ATATGTAGTAGACTTGAAAT+CGG + Chr3:66974082-66974101 None:intergenic 25.0%
! ATTGTTGTATGATTGTGATT+AGG - Chr3:66972723-66972742 MsG0380015217.01.T01:intron 25.0%
! CAGAGTGAGAAATATTTAAA+AGG + Chr3:66970233-66970252 None:intergenic 25.0%
! CCAAAAAAAGATTATAGAGA+AGG - Chr3:66970677-66970696 MsG0380015217.01.T01:intron 25.0%
! CCTTGACTTTAAATTAAACA+GGG - Chr3:66970559-66970578 MsG0380015217.01.T01:intron 25.0%
! CGTACAAGAATTTAATATCA+TGG + Chr3:66971588-66971607 None:intergenic 25.0%
! GAACATAAATTAATCAAAGG+GGG + Chr3:66971647-66971666 None:intergenic 25.0%
! GAATATTATGATAAAGGCTA+TGG - Chr3:66967451-66967470 MsG0380015217.01.T01:intron 25.0%
! GATAGAGATAAGATATGATA+AGG - Chr3:66969227-66969246 MsG0380015217.01.T01:intron 25.0%
! TAAAATTCTAACGAAACTCT+TGG - Chr3:66967049-66967068 MsG0380015217.01.T01:intron 25.0%
! TAGAACAACAACAAAAACAA+TGG + Chr3:66974140-66974159 None:intergenic 25.0%
! TCAACAATTGAAATTGACAA+CGG + Chr3:66970516-66970535 None:intergenic 25.0%
! TGATTCTTGAATGTATCAAA+TGG - Chr3:66972145-66972164 MsG0380015217.01.T01:intron 25.0%
! TGGTGAATAATTTACAGTTT+CGG - Chr3:66966729-66966748 MsG0380015217.01.T01:intron 25.0%
! TTATGGATCAAACTAACTAA+CGG + Chr3:66972288-66972307 None:intergenic 25.0%
!! ACTTTGTTTGTTTGAATTTG+AGG - Chr3:66974452-66974471 MsG0380015217.01.T01:CDS 25.0%
!! AGTTGAATTTTATATGGTCA+TGG - Chr3:66973802-66973821 MsG0380015217.01.T01:intron 25.0%
!! ATAATTGTTGCACTAGTTTA+TGG + Chr3:66969821-66969840 None:intergenic 25.0%
!! ATTTCAAGTCTACTACATAT+GGG - Chr3:66974082-66974101 MsG0380015217.01.T01:intron 25.0%
!! CAGTTTTCCAATGATTTTTT+GGG + Chr3:66968878-66968897 None:intergenic 25.0%
!! GAAACTTTTGATGTTTAAAG+TGG - Chr3:66967202-66967221 MsG0380015217.01.T01:intron 25.0%
!! GTTGAGTCAGATAATTTTAA+AGG - Chr3:66967473-66967492 MsG0380015217.01.T01:intron 25.0%
!! TAAGAAGTATATCAATTGGA+AGG + Chr3:66973661-66973680 None:intergenic 25.0%
!! TAATTCATTGTGTTCGATTT+TGG - Chr3:66966611-66966630 MsG0380015217.01.T01:CDS 25.0%
!! TTGGATTTGTGTTATTGTTA+TGG - Chr3:66974424-66974443 MsG0380015217.01.T01:intron 25.0%
!! TTGGTGAATTTTTATTGTCA+TGG - Chr3:66973025-66973044 MsG0380015217.01.T01:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + Chr3:66970151-66970170 None:intergenic 25.0%
!!! AATTTTAAAGGCTATAGTGT+TGG - Chr3:66967485-66967504 MsG0380015217.01.T01:intron 25.0%
!!! AATTTTTTACGGTTAAGAAC+GGG + Chr3:66967797-66967816 None:intergenic 25.0%
!!! ACACAAGTTTTTTGTTTGTT+GGG - Chr3:66967647-66967666 MsG0380015217.01.T01:intron 25.0%
!!! AGATTTGTTCTCTATTTTCT+TGG - Chr3:66971987-66972006 MsG0380015217.01.T01:intron 25.0%
!!! ATCAGTTGATGAAGAAAATT+GGG - Chr3:66966180-66966199 MsG0380015217.01.T01:intron 25.0%
!!! ATTTGGTCATTGTTTTTTCT+AGG - Chr3:66974399-66974418 MsG0380015217.01.T01:intron 25.0%
!!! ATTTTGAACTCTAGAAAACT+TGG - Chr3:66968135-66968154 MsG0380015217.01.T01:CDS 25.0%
!!! CAACTACTTTTTGGATTTTT+TGG - Chr3:66974652-66974671 MsG0380015217.01.T01:CDS 25.0%
!!! CAGACAGTCAAAATTTTTTA+CGG + Chr3:66967808-66967827 None:intergenic 25.0%
!!! CCTTCTCTATAATCTTTTTT+TGG + Chr3:66970680-66970699 None:intergenic 25.0%
!!! GATAAATTTTGTGATAACGA+TGG - Chr3:66969702-66969721 MsG0380015217.01.T01:intron 25.0%
!!! GATGTTTTGTTCTGTTTTTT+AGG - Chr3:66971324-66971343 MsG0380015217.01.T01:intron 25.0%
!!! GGTTTATTTCTGAATTTCAT+CGG - Chr3:66966914-66966933 MsG0380015217.01.T01:CDS 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + Chr3:66970152-66970171 None:intergenic 25.0%
!!! TACAAGGTTGCTATTTTATA+GGG + Chr3:66970059-66970078 None:intergenic 25.0%
!!! TATCAGTTGATGAAGAAAAT+TGG - Chr3:66966179-66966198 MsG0380015217.01.T01:intron 25.0%
!!! TCATTGTTTTTTCTAGGATT+TGG - Chr3:66974405-66974424 MsG0380015217.01.T01:intron 25.0%
!!! TGATTTTCAACCTATTTCTT+TGG - Chr3:66967013-66967032 MsG0380015217.01.T01:CDS 25.0%
!!! TTACAAGGTTGCTATTTTAT+AGG + Chr3:66970060-66970079 None:intergenic 25.0%
!!! TTTAATATCATGGTTTGGTT+TGG + Chr3:66971578-66971597 None:intergenic 25.0%
!!! TTTATTTTATCCTATCCCTT+TGG - Chr3:66969552-66969571 MsG0380015217.01.T01:intron 25.0%
!!! TTTGTTGTTGTTCTAATTGT+TGG - Chr3:66974145-66974164 MsG0380015217.01.T01:intron 25.0%
AAAAGATTATAGAGAAGGTG+AGG - Chr3:66970682-66970701 MsG0380015217.01.T01:intron 30.0%
AAAAGTTAGTTAGTTGGAGA+AGG + Chr3:66973505-66973524 None:intergenic 30.0%
AAAATCATTGGAAAACTGGA+TGG - Chr3:66968880-66968899 MsG0380015217.01.T01:intron 30.0%
AAATCATTGGAAAACTGGAT+GGG - Chr3:66968881-66968900 MsG0380015217.01.T01:intron 30.0%
AACTGTAAATTATTCACCAC+CGG + Chr3:66966728-66966747 None:intergenic 30.0%
AAGAGAGAGAAAATAATCAC+TGG + Chr3:66971225-66971244 None:intergenic 30.0%
AATGATCTTCTAATCTCATC+AGG - Chr3:66969459-66969478 MsG0380015217.01.T01:intron 30.0%
ACAATGACCAAATTCTAATG+CGG + Chr3:66974392-66974411 None:intergenic 30.0%
ACTCAGGATAGAAATTACAA+AGG - Chr3:66969503-66969522 MsG0380015217.01.T01:intron 30.0%
AGAAATTACAAAGGAAAGTC+AGG - Chr3:66969512-66969531 MsG0380015217.01.T01:intron 30.0%
AGAACAAGAACGAAATATCA+AGG - Chr3:66968813-66968832 MsG0380015217.01.T01:intron 30.0%
AGGATCATAGGAAAATTTGT+TGG - Chr3:66968005-66968024 MsG0380015217.01.T01:CDS 30.0%
AGTAGACTAGATTATAGAGA+AGG - Chr3:66970646-66970665 MsG0380015217.01.T01:intron 30.0%
ATAAACTCACACACATAAAG+TGG - Chr3:66968482-66968501 MsG0380015217.01.T01:intron 30.0%
ATAACTTGATTCAAACAAGG+TGG + Chr3:66973613-66973632 None:intergenic 30.0%
ATATCAAGGGCAATAATTTC+TGG - Chr3:66968827-66968846 MsG0380015217.01.T01:CDS 30.0%
ATATTGTTACCCCTTCTAAA+TGG + Chr3:66972075-66972094 None:intergenic 30.0%
ATCACGACAAACTAAAAAAC+AGG + Chr3:66970359-66970378 None:intergenic 30.0%
ATCATGGAAGTAACAACATA+TGG + Chr3:66974291-66974310 None:intergenic 30.0%
ATTGTGATAGTTTAAGAGTC+CGG - Chr3:66966826-66966845 MsG0380015217.01.T01:intron 30.0%
ATTTCTGAATTTCATCGGAA+TGG - Chr3:66966919-66966938 MsG0380015217.01.T01:CDS 30.0%
CAGAACAGAAAAAATCATCA+TGG + Chr3:66971357-66971376 None:intergenic 30.0%
CAGATGATTCAATATACAAC+AGG + Chr3:66972438-66972457 None:intergenic 30.0%
CCAAAAAATCATTGGAAAAC+TGG - Chr3:66968876-66968895 MsG0380015217.01.T01:intron 30.0%
CTAACTAACGGAAAACATAT+TGG + Chr3:66972276-66972295 None:intergenic 30.0%
GAACAAGAACGAAATATCAA+GGG - Chr3:66968814-66968833 MsG0380015217.01.T01:intron 30.0%
GAATCAAATGAGAACGAAAA+CGG + Chr3:66970786-66970805 None:intergenic 30.0%
GACCTATAATAAAATGTGGA+AGG - Chr3:66968673-66968692 MsG0380015217.01.T01:intron 30.0%
GCCTTGACTTTAAATTAAAC+AGG - Chr3:66970558-66970577 MsG0380015217.01.T01:intron 30.0%
GGGTCTGAATATTATGATAA+AGG - Chr3:66967445-66967464 MsG0380015217.01.T01:intron 30.0%
GGTGAATAATTTACAGTTTC+GGG - Chr3:66966730-66966749 MsG0380015217.01.T01:intron 30.0%
GTAATTTCTATCCTGAGTAT+AGG + Chr3:66969501-66969520 None:intergenic 30.0%
TAAACTCACACACATAAAGT+GGG - Chr3:66968483-66968502 MsG0380015217.01.T01:intron 30.0%
TAAACTCCGTTCATAATGTT+CGG - Chr3:66968518-66968537 MsG0380015217.01.T01:intron 30.0%
TAACAAATGGAAATCTCTTC+AGG - Chr3:66966267-66966286 MsG0380015217.01.T01:three_prime_UTR 30.0%
TATAGCTCTTATTCCTAAAG+TGG - Chr3:66966972-66966991 MsG0380015217.01.T01:CDS 30.0%
TATGTTCATTATGTCAGGAT+TGG - Chr3:66971660-66971679 MsG0380015217.01.T01:intron 30.0%
TATTGTTACCCCTTCTAAAT+GGG + Chr3:66972074-66972093 None:intergenic 30.0%
TATTTCGTTCTTGTTCTAGT+TGG + Chr3:66968810-66968829 None:intergenic 30.0%
TCAAATCGAATCGAATCTTT+AGG - Chr3:66970812-66970831 MsG0380015217.01.T01:intron 30.0%
TCCATTCAATAAGTCAAAAG+AGG + Chr3:66973471-66973490 None:intergenic 30.0%
TGACATTAACACCTTCTTAT+GGG - Chr3:66973992-66974011 MsG0380015217.01.T01:intron 30.0%
TGGAAATAGCAAACCTTAAT+TGG + Chr3:66973593-66973612 None:intergenic 30.0%
TGTATGATTGTGATTAGGTA+TGG - Chr3:66972728-66972747 MsG0380015217.01.T01:intron 30.0%
TTAGTCCCATAAATCCTAAT+AGG + Chr3:66968544-66968563 None:intergenic 30.0%
TTATTTGCTTACCCATAAGA+AGG + Chr3:66974006-66974025 None:intergenic 30.0%
TTCTCATATTATTACCACCA+TGG + Chr3:66972919-66972938 None:intergenic 30.0%
TTTCTGAATTTCATCGGAAT+GGG - Chr3:66966920-66966939 MsG0380015217.01.T01:CDS 30.0%
! AAGTATGGACTAAACTTACA+AGG + Chr3:66970075-66970094 None:intergenic 30.0%
! ATGATTCTAGAAAAACGTTG+CGG + Chr3:66971128-66971147 None:intergenic 30.0%
! CCAGTTTTCCAATGATTTTT+TGG + Chr3:66968879-66968898 None:intergenic 30.0%
! CCCTGTTTAATTTAAAGTCA+AGG + Chr3:66970562-66970581 None:intergenic 30.0%
! CTCCTTCCACATTTTATTAT+AGG + Chr3:66968678-66968697 None:intergenic 30.0%
! CTTTGTTTATGTTCCAATAG+AGG - Chr3:66973525-66973544 MsG0380015217.01.T01:intron 30.0%
! GATTTCAAGTCTACTACATA+TGG - Chr3:66974081-66974100 MsG0380015217.01.T01:intron 30.0%
! GGGTCTCTAAAAAAAAAAGT+TGG - Chr3:66968111-66968130 MsG0380015217.01.T01:CDS 30.0%
! TCTCAATTGAACTTGTCTTT+TGG - Chr3:66973006-66973025 MsG0380015217.01.T01:intron 30.0%
! TTTCAACCTATTTCTTTGGT+GGG - Chr3:66967017-66967036 MsG0380015217.01.T01:CDS 30.0%
! TTTCAAGTCTACTACATATG+GGG - Chr3:66974083-66974102 MsG0380015217.01.T01:intron 30.0%
!! AAGTTTAATTTGGCTTTGCT+AGG - Chr3:66968080-66968099 MsG0380015217.01.T01:CDS 30.0%
!! AGTCTGCTTTTGTTAAAGAT+TGG - Chr3:66967117-66967136 MsG0380015217.01.T01:intron 30.0%
!! ATATTTGACTCTTTTGACTG+AGG - Chr3:66967676-66967695 MsG0380015217.01.T01:intron 30.0%
!! CATAGGAAAATTTGTTGGAT+AGG - Chr3:66968010-66968029 MsG0380015217.01.T01:CDS 30.0%
!! CTGATGATGCTTTGATTTTA+GGG - Chr3:66967545-66967564 MsG0380015217.01.T01:CDS 30.0%
!! GTTTAAAGTGGATTTTGAGA+AGG - Chr3:66967214-66967233 MsG0380015217.01.T01:intron 30.0%
!! TACTTATGGCAACTACTTTT+TGG - Chr3:66974643-66974662 MsG0380015217.01.T01:CDS 30.0%
!! TAGCAAACCTTAATTGGTTT+TGG + Chr3:66973587-66973606 None:intergenic 30.0%
!! TCAGTTGATGAAGAAAATTG+GGG - Chr3:66966181-66966200 MsG0380015217.01.T01:intron 30.0%
!! TCGAGTGGTTTAACTTTTTA+GGG + Chr3:66968173-66968192 None:intergenic 30.0%
!! TGATGATGCTTTGATTTTAG+GGG - Chr3:66967546-66967565 MsG0380015217.01.T01:CDS 30.0%
!! TGATTTTACTTATTTGGGGT+TGG - Chr3:66972016-66972035 MsG0380015217.01.T01:intron 30.0%
!! TTTTCAACCTATTTCTTTGG+TGG - Chr3:66967016-66967035 MsG0380015217.01.T01:CDS 30.0%
!! TTTTGGATTTTTTGGTGGTT+GGG - Chr3:66974660-66974679 MsG0380015217.01.T01:CDS 30.0%
!! TTTTGTTTGTTAGCATGTGA+GGG + Chr3:66970993-66971012 None:intergenic 30.0%
!! TTTTTGGATTTTTTGGTGGT+TGG - Chr3:66974659-66974678 MsG0380015217.01.T01:CDS 30.0%
!!! ACATGTTTTGGTTTTGGTTT+TGG + Chr3:66970876-66970895 None:intergenic 30.0%
!!! ACCTCTTTTGACTTATTGAA+TGG - Chr3:66973467-66973486 MsG0380015217.01.T01:intron 30.0%
!!! AGCAAACCTTAATTGGTTTT+GGG + Chr3:66973586-66973605 None:intergenic 30.0%
!!! ATTTTTTTTTTTGGGGAGGA+GGG - Chr3:66967969-66967988 MsG0380015217.01.T01:intron 30.0%
!!! CACAAGTTTTTTGTTTGTTG+GGG - Chr3:66967648-66967667 MsG0380015217.01.T01:intron 30.0%
!!! CACACAAGTTTTTTGTTTGT+TGG - Chr3:66967646-66967665 MsG0380015217.01.T01:intron 30.0%
!!! CGTAAAAAATTTTGACTGTC+TGG - Chr3:66967806-66967825 MsG0380015217.01.T01:intron 30.0%
!!! CTACTTTTTGGATTTTTTGG+TGG - Chr3:66974655-66974674 MsG0380015217.01.T01:CDS 30.0%
!!! TAAGTTGATTTTGGGATATG+AGG - Chr3:66971302-66971321 MsG0380015217.01.T01:intron 30.0%
!!! TATTTTTTTTTTTGGGGAGG+AGG - Chr3:66967968-66967987 MsG0380015217.01.T01:intron 30.0%
!!! TGTCTTTGTTGGTGATTTTA+TGG + Chr3:66972305-66972324 None:intergenic 30.0%
!!! TGTGTCTTTTTTAACGCATT+TGG - Chr3:66972214-66972233 MsG0380015217.01.T01:intron 30.0%
!!! TGTTTTTTGATGGTTGAGTA+TGG - Chr3:66971381-66971400 MsG0380015217.01.T01:intron 30.0%
AAAAATGCCAATGACCATGA+GGG - Chr3:66974577-66974596 MsG0380015217.01.T01:CDS 35.0%
AAACTCACACACATAAAGTG+GGG - Chr3:66968484-66968503 MsG0380015217.01.T01:intron 35.0%
AAAGATTGGCAGATTCTTGA+TGG - Chr3:66967131-66967150 MsG0380015217.01.T01:intron 35.0%
AAAGCCAAATTGATGTCATC+AGG + Chr3:66966854-66966873 None:intergenic 35.0%
AAATCATCGCCGAATACATA+TGG - Chr3:66970943-66970962 MsG0380015217.01.T01:intron 35.0%
AACTAGTGCAACAATTATGG+TGG - Chr3:66969823-66969842 MsG0380015217.01.T01:intron 35.0%
AAGATTGGCAGATTCTTGAT+GGG - Chr3:66967132-66967151 MsG0380015217.01.T01:intron 35.0%
AATAGGCCGAACATTATGAA+CGG + Chr3:66968527-66968546 None:intergenic 35.0%
AATGCATAACTATGCAAGTC+TGG + Chr3:66974724-66974743 None:intergenic 35.0%
AATTGATGTCTTTCTGCACA+AGG + Chr3:66972769-66972788 None:intergenic 35.0%
ACAGTAAACAAGTGGCAAAA+AGG + Chr3:66972690-66972709 None:intergenic 35.0%
ACTTGAAAGAGGACATTATG+AGG - Chr3:66966893-66966912 MsG0380015217.01.T01:intron 35.0%
AGTAGCAACAAAAGATACCA+TGG + Chr3:66972651-66972670 None:intergenic 35.0%
ATAACTTCACTATCTTCTCC+AGG + Chr3:66971907-66971926 None:intergenic 35.0%
ATAAGAAAATGGTGTGACCA+TGG - Chr3:66972899-66972918 MsG0380015217.01.T01:intron 35.0%
ATCAACATCAGTGGAATCAA+TGG - Chr3:66973189-66973208 MsG0380015217.01.T01:intron 35.0%
ATCAGAACACAGTAAACAAG+TGG + Chr3:66972698-66972717 None:intergenic 35.0%
ATGAAGAAAATTGGGGTCTT+AGG - Chr3:66966188-66966207 MsG0380015217.01.T01:intron 35.0%
ATGCATAACTATGCAAGTCT+GGG + Chr3:66974723-66974742 None:intergenic 35.0%
ATGGAAATCTCTTCAGGTAA+CGG - Chr3:66966273-66966292 MsG0380015217.01.T01:three_prime_UTR 35.0%
ATGTTTCAGACTTTCAGTGA+TGG + Chr3:66969146-66969165 None:intergenic 35.0%
CAAAAACAATGGTTCAGACT+AGG + Chr3:66974129-66974148 None:intergenic 35.0%
CTGACAAATTGTTTGTAACC+AGG + Chr3:66966247-66966266 None:intergenic 35.0%
CTGACATTAACACCTTCTTA+TGG - Chr3:66973991-66974010 MsG0380015217.01.T01:intron 35.0%
CTGTGAACCCAAAAAATCAT+TGG - Chr3:66968868-66968887 MsG0380015217.01.T01:intron 35.0%
CTTTGACCCAAAACCAATTA+AGG - Chr3:66973577-66973596 MsG0380015217.01.T01:CDS 35.0%
GATACTGATAGCTAATAAGG+TGG - Chr3:66967154-66967173 MsG0380015217.01.T01:CDS 35.0%
GGCAAGATATGATATAAAGC+TGG - Chr3:66969205-66969224 MsG0380015217.01.T01:CDS 35.0%
GTATATCAATTGGAAGGAGT+TGG + Chr3:66973655-66973674 None:intergenic 35.0%
GTCTTAATACCAGCATTTGT+TGG - Chr3:66966505-66966524 MsG0380015217.01.T01:three_prime_UTR 35.0%
TAATGCAAAACTAGGGTGAT+TGG - Chr3:66973714-66973733 MsG0380015217.01.T01:intron 35.0%
TAATGTGAGTCAACATGTCA+CGG + Chr3:66973148-66973167 None:intergenic 35.0%
TAGAAGGGGTAACAATATCT+TGG - Chr3:66972077-66972096 MsG0380015217.01.T01:intron 35.0%
TAGACTGCCTTTCCTTTATT+TGG - Chr3:66967727-66967746 MsG0380015217.01.T01:CDS 35.0%
TAGGAACAGAAAAAGCAACT+AGG - Chr3:66970710-66970729 MsG0380015217.01.T01:intron 35.0%
TAGGATTTATGGGACTAATG+AGG - Chr3:66968546-66968565 MsG0380015217.01.T01:intron 35.0%
TATGGATCCATGTTAGATGA+TGG + Chr3:66974273-66974292 None:intergenic 35.0%
TATTGTACTTAGTGGTAGAC+TGG + Chr3:66971545-66971564 None:intergenic 35.0%
TCGTGGCATAGAAAGTAAAA+TGG + Chr3:66968741-66968760 None:intergenic 35.0%
TCTAAATGGGTCCTTGAAAA+TGG + Chr3:66972061-66972080 None:intergenic 35.0%
TGAAAGCAATTGAGAAGCTT+GGG - Chr3:66973895-66973914 MsG0380015217.01.T01:intron 35.0%
TGAGGACTCAATGACTATAA+TGG - Chr3:66969068-66969087 MsG0380015217.01.T01:CDS 35.0%
TGGGATACTGATAGCTAATA+AGG - Chr3:66967151-66967170 MsG0380015217.01.T01:CDS 35.0%
TTAAGAGAAGCAATCTTCTC+CGG + Chr3:66966382-66966401 None:intergenic 35.0%
TTACAAAGGAAAGTCAGGAT+AGG - Chr3:66969517-66969536 MsG0380015217.01.T01:intron 35.0%
TTCATAATGTTCGGCCTATT+AGG - Chr3:66968527-66968546 MsG0380015217.01.T01:intron 35.0%
TTCGGCCTATTAGGATTTAT+GGG - Chr3:66968536-66968555 MsG0380015217.01.T01:intron 35.0%
TTCTAACTCAACCTATACTC+AGG - Chr3:66969487-66969506 MsG0380015217.01.T01:intron 35.0%
TTGAAAGCAATTGAGAAGCT+TGG - Chr3:66973894-66973913 MsG0380015217.01.T01:intron 35.0%
TTGTGATAGTTTAAGAGTCC+GGG - Chr3:66966827-66966846 MsG0380015217.01.T01:intron 35.0%
TTGTGCAGAAAGACATCAAT+TGG - Chr3:66972768-66972787 MsG0380015217.01.T01:intron 35.0%
TTGTTGTGAACAGAGAAATG+AGG + Chr3:66970758-66970777 None:intergenic 35.0%
TTTCAAGGACCCATTTAGAA+GGG - Chr3:66972062-66972081 MsG0380015217.01.T01:intron 35.0%
! ACCAAAAATTTTTCGTCGAG+TGG + Chr3:66968188-66968207 None:intergenic 35.0%
! ACCACTCGACGAAAAATTTT+TGG - Chr3:66968184-66968203 MsG0380015217.01.T01:intron 35.0%
! AGACTGCCTTTCCTTTATTT+GGG - Chr3:66967728-66967747 MsG0380015217.01.T01:CDS 35.0%
! AGTAGTGTTTTTCGTACGTA+CGG + Chr3:66971062-66971081 None:intergenic 35.0%
! AGTCTGAAACATTAACCTGT+AGG - Chr3:66969154-66969173 MsG0380015217.01.T01:intron 35.0%
! ATCCCATACTCATAATTTGC+CGG - Chr3:66966360-66966379 MsG0380015217.01.T01:three_prime_UTR 35.0%
! CAATAAGTCAAAAGAGGTGT+TGG + Chr3:66973465-66973484 None:intergenic 35.0%
! GATTAAGGAGTGTGTAACTA+CGG - Chr3:66967313-66967332 MsG0380015217.01.T01:intron 35.0%
! GTCTGAAACATTAACCTGTA+GGG - Chr3:66969155-66969174 MsG0380015217.01.T01:intron 35.0%
! GTTGATTCCGCATTAGAATT+TGG - Chr3:66974382-66974401 MsG0380015217.01.T01:intron 35.0%
! TTAATACCAGCATTTGTTGG+CGG - Chr3:66966508-66966527 MsG0380015217.01.T01:three_prime_UTR 35.0%
! TTCAACCTATTTCTTTGGTG+GGG - Chr3:66967018-66967037 MsG0380015217.01.T01:CDS 35.0%
! TTCATTGTGTTCGATTTTGG+TGG - Chr3:66966614-66966633 MsG0380015217.01.T01:CDS 35.0%
! TTGAATTTGAGGCCTGTTAT+AGG - Chr3:66974463-66974482 MsG0380015217.01.T01:CDS 35.0%
! TTGAGTTGTTCCAATGAAGT+TGG - Chr3:66970453-66970472 MsG0380015217.01.T01:intron 35.0%
! TTTTATTCATTCGTAGCTCG+TGG + Chr3:66968758-66968777 None:intergenic 35.0%
!! AAATTTGTTGGATAGGAAGG+AGG - Chr3:66968017-66968036 MsG0380015217.01.T01:CDS 35.0%
!! ATTACTTAAGAAGGCGTTGA+AGG - Chr3:66966327-66966346 MsG0380015217.01.T01:three_prime_UTR 35.0%
!! GATGATGCTTTGATTTTAGG+GGG - Chr3:66967547-66967566 MsG0380015217.01.T01:CDS 35.0%
!! GCTGATGATGCTTTGATTTT+AGG - Chr3:66967544-66967563 MsG0380015217.01.T01:CDS 35.0%
!! GGAAAATTTGTTGGATAGGA+AGG - Chr3:66968014-66968033 MsG0380015217.01.T01:CDS 35.0%
!! GTCGAGTGGTTTAACTTTTT+AGG + Chr3:66968174-66968193 None:intergenic 35.0%
!! TAGTGTTGGTTCAAAAAAGC+CGG - Chr3:66967499-66967518 MsG0380015217.01.T01:intron 35.0%
!! TATCATGGTTTGGTTTGGTT+TGG + Chr3:66971573-66971592 None:intergenic 35.0%
!! TCATTGTGTTCGATTTTGGT+GGG - Chr3:66966615-66966634 MsG0380015217.01.T01:CDS 35.0%
!! TGGTTTGGTATTGTACTTAG+TGG + Chr3:66971553-66971572 None:intergenic 35.0%
!! TTGATTTTAGGGGGAAAGTT+AGG - Chr3:66967556-66967575 MsG0380015217.01.T01:intron 35.0%
!! TTTTCAAGGACCCATTTAGA+AGG - Chr3:66972061-66972080 MsG0380015217.01.T01:intron 35.0%
!!! ATCAGTTTTGAGCTGCAAAA+TGG - Chr3:66967703-66967722 MsG0380015217.01.T01:intron 35.0%
!!! CAATGATTTTTTGGGTTCAC+AGG + Chr3:66968870-66968889 None:intergenic 35.0%
!!! CTTAATTGGTTTTGGGTCAA+AGG + Chr3:66973579-66973598 None:intergenic 35.0%
!!! CTTATCAAGCCTTTTTTCTG+TGG - Chr3:66966779-66966798 MsG0380015217.01.T01:intron 35.0%
!!! GTTCTGACTCTGTTTTTTGA+TGG - Chr3:66971371-66971390 MsG0380015217.01.T01:intron 35.0%
!!! GTTTTGTTTGTTAGCATGTG+AGG + Chr3:66970994-66971013 None:intergenic 35.0%
!!! TCAGTTTTGAGCTGCAAAAT+GGG - Chr3:66967704-66967723 MsG0380015217.01.T01:intron 35.0%
!!! TTTTTTTTTTTGGGGAGGAG+GGG - Chr3:66967970-66967989 MsG0380015217.01.T01:intron 35.0%
AAACTCCCCACCAAAGAAAT+AGG + Chr3:66967026-66967045 None:intergenic 40.0%
AAATTGATGTCATCAGGACC+CGG + Chr3:66966848-66966867 None:intergenic 40.0%
AACTCACACACATAAAGTGG+GGG - Chr3:66968485-66968504 MsG0380015217.01.T01:intron 40.0%
AAGCATCATCAGCAAACTGA+AGG + Chr3:66967537-66967556 None:intergenic 40.0%
AAGGAAAGTCAGGATAGGAT+AGG - Chr3:66969522-66969541 MsG0380015217.01.T01:intron 40.0%
AAGTCTATGAGAGAAGATGG+TGG - Chr3:66973858-66973877 MsG0380015217.01.T01:intron 40.0%
ACCAAGTCTATGAGAGAAGA+TGG - Chr3:66973855-66973874 MsG0380015217.01.T01:intron 40.0%
ACCATCTTCTCTCATAGACT+TGG + Chr3:66973859-66973878 None:intergenic 40.0%
ACTGATAGCTAATAAGGTGG+TGG - Chr3:66967157-66967176 MsG0380015217.01.T01:CDS 40.0%
AGATTGCTTCTCTTAAGGAC+AGG - Chr3:66966386-66966405 MsG0380015217.01.T01:three_prime_UTR 40.0%
AGGAGTCAAACCAACTTCAT+TGG + Chr3:66970466-66970485 None:intergenic 40.0%
ATCAGGATGGCTGAAAATCT+TGG + Chr3:66972613-66972632 None:intergenic 40.0%
ATCATCGAGTGTGTCTTTGT+TGG + Chr3:66972316-66972335 None:intergenic 40.0%
CAAAACTAGGGTGATTGGAA+TGG - Chr3:66973719-66973738 MsG0380015217.01.T01:intron 40.0%
CAGCATTTCAACATTCGAGA+GGG + Chr3:66966214-66966233 None:intergenic 40.0%
CATCAACACAAGATTTCAGC+AGG - Chr3:66969577-66969596 MsG0380015217.01.T01:intron 40.0%
CATCAACTGATAACACCAAC+CGG + Chr3:66966171-66966190 None:intergenic 40.0%
CCTTCCTAGAGGAAATTCAT+CGG + Chr3:66967372-66967391 None:intergenic 40.0%
CTATGCTCTTTCCTTCTTCA+AGG - Chr3:66967900-66967919 MsG0380015217.01.T01:intron 40.0%
CTATTGTGAGTTTATGCAGC+TGG - Chr3:66972477-66972496 MsG0380015217.01.T01:intron 40.0%
CTCCGGCAAATTATGAGTAT+GGG + Chr3:66966365-66966384 None:intergenic 40.0%
CTTGGCAAATAGATTGAGAC+AGG - Chr3:66967067-66967086 MsG0380015217.01.T01:intron 40.0%
GAAAAATGCCAATGACCATG+AGG - Chr3:66974576-66974595 MsG0380015217.01.T01:CDS 40.0%
GAACCATCATAGTTCCACTT+GGG + Chr3:66971868-66971887 None:intergenic 40.0%
GGAGAAGATTGCTTCTCTTA+AGG - Chr3:66966381-66966400 MsG0380015217.01.T01:three_prime_UTR 40.0%
GTACGTTGTTCGAAAAGTCA+AGG - Chr3:66968784-66968803 MsG0380015217.01.T01:intron 40.0%
GTCAGGATAGGATAGGAAAA+TGG - Chr3:66969529-66969548 MsG0380015217.01.T01:intron 40.0%
GTTCATTATGTCAGGATTGG+TGG - Chr3:66971663-66971682 MsG0380015217.01.T01:intron 40.0%
GTTCGGCCTATTAGGATTTA+TGG - Chr3:66968535-66968554 MsG0380015217.01.T01:intron 40.0%
TACTTCAATGCATGTGTGTG+TGG + Chr3:66974349-66974368 None:intergenic 40.0%
TATGAACGGAGTTTAAACCC+CGG + Chr3:66968513-66968532 None:intergenic 40.0%
TCAATAGGGACCATACTATG+TGG - Chr3:66973098-66973117 MsG0380015217.01.T01:intron 40.0%
TCACTTTCAAGCGCAAAATG+TGG - Chr3:66966697-66966716 MsG0380015217.01.T01:CDS 40.0%
TCATCAACACTCTGCATCAT+TGG - Chr3:66969987-66970006 MsG0380015217.01.T01:intron 40.0%
TCTCCGGCAAATTATGAGTA+TGG + Chr3:66966366-66966385 None:intergenic 40.0%
TGACTTCCTCCACAGAAAAA+AGG + Chr3:66966791-66966810 None:intergenic 40.0%
TGATGGCTAGGATATGATAG+CGG - Chr3:66969184-66969203 MsG0380015217.01.T01:intron 40.0%
TGCATAACTATGCAAGTCTG+GGG + Chr3:66974722-66974741 None:intergenic 40.0%
TGGAAATCTCTTCAGGTAAC+GGG - Chr3:66966274-66966293 MsG0380015217.01.T01:three_prime_UTR 40.0%
TGTTGTTCTAATTGTTGGCG+TGG - Chr3:66974150-66974169 MsG0380015217.01.T01:intron 40.0%
TTACAAAGCCTGTCTTATGC+CGG - Chr3:66973165-66973184 MsG0380015217.01.T01:intron 40.0%
TTATGGTTTCCAGAGAATGG+TGG + Chr3:66974322-66974341 None:intergenic 40.0%
TTCAAGCGCAAAATGTGGAT+AGG - Chr3:66966702-66966721 MsG0380015217.01.T01:CDS 40.0%
TTCAAGGACCCATTTAGAAG+GGG - Chr3:66972063-66972082 MsG0380015217.01.T01:intron 40.0%
TTCACCCTTCCTGTTATTAC+CGG - Chr3:66967415-66967434 MsG0380015217.01.T01:intron 40.0%
TTCTGATCCCTAAATGTGTG+AGG + Chr3:66972380-66972399 None:intergenic 40.0%
TTGTTAGCATGTGAGGGAAA+GGG + Chr3:66970987-66971006 None:intergenic 40.0%
TTTGTTAGCATGTGAGGGAA+AGG + Chr3:66970988-66971007 None:intergenic 40.0%
! AAAGACATCAATTGGCCTCT+TGG - Chr3:66972776-66972795 MsG0380015217.01.T01:intron 40.0%
! AACAGGGTTTTGCAAGTGAA+CGG - Chr3:66970575-66970594 MsG0380015217.01.T01:intron 40.0%
! AAGGTTATTTCGAGGATAGG+AGG - Chr3:66974247-66974266 MsG0380015217.01.T01:intron 40.0%
! ACCATTGACTAACACGGAAA+CGG + Chr3:66967342-66967361 None:intergenic 40.0%
! AGTAGGTTGACCTCATTAGA+GGG + Chr3:66968957-66968976 None:intergenic 40.0%
! ATCTTGTGTTGATGCACCAA+AGG + Chr3:66969571-66969590 None:intergenic 40.0%
! ATGTAGTGGGAATTCCAAGT+TGG - Chr3:66973338-66973357 MsG0380015217.01.T01:intron 40.0%
! ATGTTGTTGCTGAAGTACCA+TGG - Chr3:66972631-66972650 MsG0380015217.01.T01:intron 40.0%
! ATTCTAGAAAAACGTTGCGG+TGG + Chr3:66971125-66971144 None:intergenic 40.0%
! ATTTTGCGCTTGAAAGTGAG+TGG + Chr3:66966696-66966715 None:intergenic 40.0%
! CGATGAATTTCCTCTAGGAA+GGG - Chr3:66967370-66967389 MsG0380015217.01.T01:intron 40.0%
! CTACTACATATGGGGTTAGT+CGG - Chr3:66974091-66974110 MsG0380015217.01.T01:intron 40.0%
! CTGAAAGGAGAGACATGTTT+TGG + Chr3:66970888-66970907 None:intergenic 40.0%
! GAAGGAGGTATATTTGTACG+CGG - Chr3:66968032-66968051 MsG0380015217.01.T01:CDS 40.0%
! GAATGTCTTTTCCGACTTTG+TGG - Chr3:66967282-66967301 MsG0380015217.01.T01:intron 40.0%
! GATGAATTTCCTCTAGGAAG+GGG - Chr3:66967371-66967390 MsG0380015217.01.T01:intron 40.0%
! GATGATTTTCTCGGTGGTTT+CGG + Chr3:66970931-66970950 None:intergenic 40.0%
! GGAAAGGTTATTTCGAGGAT+AGG - Chr3:66974244-66974263 MsG0380015217.01.T01:intron 40.0%
! GTATTCGGCGATGATTTTCT+CGG + Chr3:66970940-66970959 None:intergenic 40.0%
! TATGGGTTGCTCGTTACATT+TGG - Chr3:66973393-66973412 MsG0380015217.01.T01:intron 40.0%
! TCTTGTGTTGATGCACCAAA+GGG + Chr3:66969570-66969589 None:intergenic 40.0%
! TGAAAGTGAGTTTTCACCTG+AGG + Chr3:66972827-66972846 None:intergenic 40.0%
! TGCAACAATTATGGTGGAGT+AGG - Chr3:66969829-66969848 MsG0380015217.01.T01:intron 40.0%
! TTCATTCCGTTTTGTCTAGC+CGG - Chr3:66966580-66966599 MsG0380015217.01.T01:CDS 40.0%
!! ATTTGGCTTTGCTAGGATAG+AGG - Chr3:66968087-66968106 MsG0380015217.01.T01:CDS 40.0%
!! CAAGGTTGATGAGATCTGAA+AGG + Chr3:66970903-66970922 None:intergenic 40.0%
!! CGTGGCTTGTGTTATTTGAA+GGG - Chr3:66974168-66974187 MsG0380015217.01.T01:intron 40.0%
!! CTTGGTGCTACAGCATTATA+AGG + Chr3:66973841-66973860 None:intergenic 40.0%
!! TGATGCAGAGTGTTGATGAA+CGG + Chr3:66969986-66970005 None:intergenic 40.0%
!! TGGTTTGGTTTGGTTTGGTT+TGG + Chr3:66971568-66971587 None:intergenic 40.0%
!! TTGGCTTTATCAATGACCTC+TGG - Chr3:66966866-66966885 MsG0380015217.01.T01:intron 40.0%
!! TTTGACTCTTTTGACTGAGG+AGG - Chr3:66967679-66967698 MsG0380015217.01.T01:intron 40.0%
!! TTTGGCTTTGCTAGGATAGA+GGG - Chr3:66968088-66968107 MsG0380015217.01.T01:CDS 40.0%
!! TTTGTGGAGGAAGTGGATTA+AGG - Chr3:66967298-66967317 MsG0380015217.01.T01:intron 40.0%
!!! AGGCTAATGTCCTTGTTTTG+CGG - Chr3:66967576-66967595 MsG0380015217.01.T01:intron 40.0%
!!! ATCAAGCCTTTTTTCTGTGG+AGG - Chr3:66966782-66966801 MsG0380015217.01.T01:intron 40.0%
!!! GGAGAGACATGTTTTGGTTT+TGG + Chr3:66970882-66970901 None:intergenic 40.0%
!!! TTTTTTTTTTGGGGAGGAGG+GGG - Chr3:66967971-66967990 MsG0380015217.01.T01:intron 40.0%
AAATGCTGGCAAGATACACC+TGG - Chr3:66966226-66966245 MsG0380015217.01.T01:three_prime_UTR 45.0%
AACAGAGAAATGAGGCAGTG+TGG + Chr3:66970750-66970769 None:intergenic 45.0%
AACTATGATGGTTCCAGCAC+AGG - Chr3:66971874-66971893 MsG0380015217.01.T01:intron 45.0%
AATAGTCGTGCTACAGTTCC+CGG + Chr3:66969917-66969936 None:intergenic 45.0%
ACAATGAATTACGGTGCCTC+CGG + Chr3:66966602-66966621 None:intergenic 45.0%
ACACGTGACGATGTAAACAC+CGG - Chr3:66969895-66969914 MsG0380015217.01.T01:intron 45.0%
ACAGAGAAATGAGGCAGTGT+GGG + Chr3:66970749-66970768 None:intergenic 45.0%
ACCGTTTCCGTGTTAGTCAA+TGG - Chr3:66967338-66967357 MsG0380015217.01.T01:CDS 45.0%
ACTTGACAGAGCCTTGAAGA+AGG + Chr3:66967914-66967933 None:intergenic 45.0%
AGAAAATGGTGTGACCATGG+TGG - Chr3:66972902-66972921 MsG0380015217.01.T01:intron 45.0%
AGGAAGTCAAAGCGGAAATC+TGG - Chr3:66966802-66966821 MsG0380015217.01.T01:intron 45.0%
AGGCCTAAGACTTCGTTGAT+TGG - Chr3:66967234-66967253 MsG0380015217.01.T01:intron 45.0%
AGTGGTAGACTGGTAGGTTT+GGG + Chr3:66971535-66971554 None:intergenic 45.0%
ATAGTCCCACTTACTTGACC+AGG + Chr3:66973225-66973244 None:intergenic 45.0%
ATCAAGGTTATCTTGGCTGC+AGG - Chr3:66966533-66966552 MsG0380015217.01.T01:three_prime_UTR 45.0%
ATCAATGGTGAAGTGATGCC+TGG - Chr3:66973204-66973223 MsG0380015217.01.T01:intron 45.0%
ATCCACTTCCTCCACAAAGT+CGG + Chr3:66967296-66967315 None:intergenic 45.0%
ATGTGTGAGGCGTGTCAATA+TGG + Chr3:66972367-66972386 None:intergenic 45.0%
CAACCTCAGTGATCCTCTAT+TGG + Chr3:66973541-66973560 None:intergenic 45.0%
CCAGCATTTCAACATTCGAG+AGG + Chr3:66966215-66966234 None:intergenic 45.0%
CCTAGAGGAAATTCATCGGT+CGG + Chr3:66967368-66967387 None:intergenic 45.0%
CCTCTCGAATGTTGAAATGC+TGG - Chr3:66966212-66966231 MsG0380015217.01.T01:intron 45.0%
CTAGAGGAAATTCATCGGTC+GGG + Chr3:66967367-66967386 None:intergenic 45.0%
CTCTAATGAGGTCAACCTAC+TGG - Chr3:66968956-66968975 MsG0380015217.01.T01:intron 45.0%
CTGAAGGTGAGATATACCAC+CGG + Chr3:66967521-66967540 None:intergenic 45.0%
CTGATAACACCAACCGGAAA+TGG + Chr3:66966165-66966184 None:intergenic 45.0%
CTGGTGCTCACACAAATTAC+AGG - Chr3:66973744-66973763 MsG0380015217.01.T01:CDS 45.0%
CTTCAGCAACAACATCAGGA+TGG + Chr3:66972626-66972645 None:intergenic 45.0%
CTTCCCAAGTGGAACTATGA+TGG - Chr3:66971862-66971881 MsG0380015217.01.T01:intron 45.0%
GAGGTATATTTGTACGCGGA+GGG - Chr3:66968036-66968055 MsG0380015217.01.T01:CDS 45.0%
GATTCCACTGATGTTGATGC+CGG + Chr3:66973187-66973206 None:intergenic 45.0%
GGAACCATCATAGTTCCACT+TGG + Chr3:66971869-66971888 None:intergenic 45.0%
GGAAGGCCCAAATAAAGGAA+AGG + Chr3:66967737-66967756 None:intergenic 45.0%
GGAAGTCAAAGCGGAAATCT+GGG - Chr3:66966803-66966822 MsG0380015217.01.T01:intron 45.0%
GGCTTATGGTTTCCAGAGAA+TGG + Chr3:66974325-66974344 None:intergenic 45.0%
GGGTCCTGATGACATCAATT+TGG - Chr3:66966847-66966866 MsG0380015217.01.T01:intron 45.0%
GGTACTTCAGCAACAACATC+AGG + Chr3:66972630-66972649 None:intergenic 45.0%
GTACTTAGTGGTAGACTGGT+AGG + Chr3:66971541-66971560 None:intergenic 45.0%
GTGCGCATCAAACACATGAT+AGG + Chr3:66969270-66969289 None:intergenic 45.0%
GTTCCAATAGAGGATCACTG+AGG - Chr3:66973535-66973554 MsG0380015217.01.T01:intron 45.0%
TAACACCAACCGGAAATGGT+CGG + Chr3:66966161-66966180 None:intergenic 45.0%
TAGAGAAGGTGAGGAAGACT+AGG - Chr3:66970691-66970710 MsG0380015217.01.T01:intron 45.0%
TAGGAGGCCATCATCTAACA+TGG - Chr3:66974263-66974282 MsG0380015217.01.T01:intron 45.0%
TAGTGGTAGACTGGTAGGTT+TGG + Chr3:66971536-66971555 None:intergenic 45.0%
TCCCAAAATAACAACCTGCG+CGG + Chr3:66967773-66967792 None:intergenic 45.0%
TCGTTACATTTGGAGGTAGG+TGG - Chr3:66973403-66973422 MsG0380015217.01.T01:intron 45.0%
TCTCCTCCCTTTACCATCAA+GGG + Chr3:66966419-66966438 None:intergenic 45.0%
TGACACGCCTCACACATTTA+GGG - Chr3:66972370-66972389 MsG0380015217.01.T01:intron 45.0%
TGAGATAACCTCGAGAGAGA+AGG - Chr3:66969852-66969871 MsG0380015217.01.T01:intron 45.0%
TGATGCCTGGTCAAGTAAGT+GGG - Chr3:66973217-66973236 MsG0380015217.01.T01:intron 45.0%
TGCTCGTTACATTTGGAGGT+AGG - Chr3:66973400-66973419 MsG0380015217.01.T01:intron 45.0%
TGCTTCTCTTAAGGACAGGT+TGG - Chr3:66966390-66966409 MsG0380015217.01.T01:three_prime_UTR 45.0%
TGTTGATGCACCAAAGGGAT+AGG + Chr3:66969565-66969584 None:intergenic 45.0%
TTCAATGCATGTGTGTGTGG+TGG + Chr3:66974346-66974365 None:intergenic 45.0%
TTCTCCTCCCTTTACCATCA+AGG + Chr3:66966420-66966439 None:intergenic 45.0%
TTCTGTGGAGGAAGTCAAAG+CGG - Chr3:66966794-66966813 MsG0380015217.01.T01:intron 45.0%
TTGAAACCCTCCCTCTAATG+AGG - Chr3:66968944-66968963 MsG0380015217.01.T01:intron 45.0%
TTGACACGCCTCACACATTT+AGG - Chr3:66972369-66972388 MsG0380015217.01.T01:intron 45.0%
! AAGGAGCACATTGCTGCTTA+TGG - Chr3:66973927-66973946 MsG0380015217.01.T01:intron 45.0%
! AATGGTGGTGTCTGCAATCA+TGG + Chr3:66974307-66974326 None:intergenic 45.0%
! ACATCAATTGGCCTCTTGGT+TGG - Chr3:66972780-66972799 MsG0380015217.01.T01:intron 45.0%
! AGCAGGGAAAGGTTATTTCG+AGG - Chr3:66974239-66974258 MsG0380015217.01.T01:intron 45.0%
! ATGTCTCTTGTTGGTGGGAA+TGG + Chr3:66972583-66972602 None:intergenic 45.0%
! CACATTGCTGCTTATGGAGA+AGG - Chr3:66973933-66973952 MsG0380015217.01.T01:intron 45.0%
! CAGTAGGTTGACCTCATTAG+AGG + Chr3:66968958-66968977 None:intergenic 45.0%
! CCGATGAATTTCCTCTAGGA+AGG - Chr3:66967369-66967388 MsG0380015217.01.T01:intron 45.0%
! CCTAAGACTTCGTTGATTGG+GGG - Chr3:66967237-66967256 MsG0380015217.01.T01:intron 45.0%
! CTCTGCTGGTGATGAGATAT+GGG - Chr3:66973376-66973395 MsG0380015217.01.T01:intron 45.0%
! CTTTATTTGGGCCTTCCGAT+CGG - Chr3:66967740-66967759 MsG0380015217.01.T01:CDS 45.0%
! GCCTAAGACTTCGTTGATTG+GGG - Chr3:66967236-66967255 MsG0380015217.01.T01:intron 45.0%
! GGCCTAAGACTTCGTTGATT+GGG - Chr3:66967235-66967254 MsG0380015217.01.T01:intron 45.0%
! GGGGTATCTTGATGCAGTTA+TGG - Chr3:66967256-66967275 MsG0380015217.01.T01:intron 45.0%
! GGTCCTTGAAAATGGCTTGT+GGG + Chr3:66972053-66972072 None:intergenic 45.0%
! TATGTCAGGATTGGTGGATC+TGG - Chr3:66971669-66971688 MsG0380015217.01.T01:intron 45.0%
! TCTCTGCTGGTGATGAGATA+TGG - Chr3:66973375-66973394 MsG0380015217.01.T01:intron 45.0%
! TGTCTCTTGTTGGTGGGAAT+GGG + Chr3:66972582-66972601 None:intergenic 45.0%
! TGTCTTTTCCGACTTTGTGG+AGG - Chr3:66967285-66967304 MsG0380015217.01.T01:intron 45.0%
! TTAGAGGGAGGGTTTCAAGT+TGG + Chr3:66968942-66968961 None:intergenic 45.0%
! TTGATGGTAAAGGGAGGAGA+AGG - Chr3:66966419-66966438 MsG0380015217.01.T01:three_prime_UTR 45.0%
!! ACATATGGGGTTAGTCGGTT+GGG - Chr3:66974096-66974115 MsG0380015217.01.T01:intron 45.0%
!! AGCTAATAAGGTGGTGGATG+AGG - Chr3:66967163-66967182 MsG0380015217.01.T01:CDS 45.0%
!! AGGGTTTCAAGTTGGGAAAG+TGG + Chr3:66968934-66968953 None:intergenic 45.0%
!! GCGTGGCTTGTGTTATTTGA+AGG - Chr3:66974167-66974186 MsG0380015217.01.T01:intron 45.0%
!! GGATGTGGGTTAGACAATTG+AGG - Chr3:66968057-66968076 MsG0380015217.01.T01:CDS 45.0%
!! TACATATGGGGTTAGTCGGT+TGG - Chr3:66974095-66974114 MsG0380015217.01.T01:intron 45.0%
!! TAGAGGGAGGGTTTCAAGTT+GGG + Chr3:66968941-66968960 None:intergenic 45.0%
!! TGCAGCTGGTCTTGTTTCAT+TGG - Chr3:66972491-66972510 MsG0380015217.01.T01:intron 45.0%
!! TGCGTCGATTAGAGTTGGAA+GGG - Chr3:66974206-66974225 MsG0380015217.01.T01:intron 45.0%
!! TGTTGGTTCAAAAAAGCCGG+TGG - Chr3:66967502-66967521 MsG0380015217.01.T01:intron 45.0%
!! TTAAGAAGGCGTTGAAGGAG+TGG - Chr3:66966332-66966351 MsG0380015217.01.T01:three_prime_UTR 45.0%
!! TTGGCTTTGCTAGGATAGAG+GGG - Chr3:66968089-66968108 MsG0380015217.01.T01:CDS 45.0%
!! TTGTGTTCGATTTTGGTGGG+CGG - Chr3:66966618-66966637 MsG0380015217.01.T01:CDS 45.0%
!!! ATCCGCGCAGGTTGTTATTT+TGG - Chr3:66967768-66967787 MsG0380015217.01.T01:CDS 45.0%
!!! GGCTAATGTCCTTGTTTTGC+GGG - Chr3:66967577-66967596 MsG0380015217.01.T01:intron 45.0%
!!! TAATGTCCTTGTTTTGCGGG+CGG - Chr3:66967580-66967599 MsG0380015217.01.T01:intron 45.0%
!!! TCCGCGCAGGTTGTTATTTT+GGG - Chr3:66967769-66967788 MsG0380015217.01.T01:CDS 45.0%
!!! TTTTTTTTTGGGGAGGAGGG+GGG - Chr3:66967972-66967991 MsG0380015217.01.T01:intron 45.0%
!! TAATTTATTGAAAATATAAA+TGG - Chr3:66971790-66971809 MsG0380015217.01.T01:intron 5.0%
!! TTAAATAAAAATATATATTG+AGG - Chr3:66969050-66969069 MsG0380015217.01.T01:CDS 5.0%
!!! TAATATTATTTTTTTTTTTG+GGG - Chr3:66967962-66967981 MsG0380015217.01.T01:intron 5.0%
!!! TAATTTTTCTTTTTATTTTT+GGG - Chr3:66970016-66970035 MsG0380015217.01.T01:intron 5.0%
!!! TATAAGTAATTTTTTTTTAT+AGG + Chr3:66970120-66970139 None:intergenic 5.0%
AACCTGTAGGGTGCGTTTGA+TGG - Chr3:66969167-66969186 MsG0380015217.01.T01:intron 50.0%
AAGGGAGGAGAAGGAGTTGT+CGG - Chr3:66966428-66966447 MsG0380015217.01.T01:three_prime_UTR 50.0%
AAGGTTATCTTGGCTGCAGG+AGG - Chr3:66966536-66966555 MsG0380015217.01.T01:three_prime_UTR 50.0%
ACCAGCAGAGATACCAACTG+AGG + Chr3:66973366-66973385 None:intergenic 50.0%
ACCCTTCCTGTTATTACCGG+CGG - Chr3:66967418-66967437 MsG0380015217.01.T01:intron 50.0%
ACGTGAATGCTCGCTCTGTA+CGG + Chr3:66969953-66969972 None:intergenic 50.0%
ACGTGTCTGCTGGTACAGTA+AGG + Chr3:66969881-66969900 None:intergenic 50.0%
ACTGTCTGGTTAGCAAAGCC+GGG - Chr3:66967820-66967839 MsG0380015217.01.T01:intron 50.0%
AGCACCAGCACCACATAGTA+TGG + Chr3:66973111-66973130 None:intergenic 50.0%
AGCGCAAAATGTGGATAGGC+CGG - Chr3:66966706-66966725 MsG0380015217.01.T01:CDS 50.0%
AGCTGCATGTCTCTTGTTGG+TGG + Chr3:66972589-66972608 None:intergenic 50.0%
AGCTGTGAAGGGTCAGTAAC+TGG + Chr3:66971844-66971863 None:intergenic 50.0%
AGGTTATCTTGGCTGCAGGA+GGG - Chr3:66966537-66966556 MsG0380015217.01.T01:three_prime_UTR 50.0%
AGGTTGACCTCATTAGAGGG+AGG + Chr3:66968954-66968973 None:intergenic 50.0%
AGTTGAGGGCAGTCCACTTT+AGG + Chr3:66966988-66967007 None:intergenic 50.0%
ATATTCAGACCCTATGCCGC+CGG + Chr3:66967437-66967456 None:intergenic 50.0%
ATGCTCGCTCTGTACGGTAA+AGG + Chr3:66969947-66969966 None:intergenic 50.0%
ATTCCTGCCTTCTTCCCTCA+TGG + Chr3:66974594-66974613 None:intergenic 50.0%
ATTTGTACGCGGAGGGATGT+GGG - Chr3:66968043-66968062 MsG0380015217.01.T01:CDS 50.0%
CAACTCTAATCGACGCACCA+CGG + Chr3:66974203-66974222 None:intergenic 50.0%
CACGTGACGATGTAAACACC+GGG - Chr3:66969896-66969915 MsG0380015217.01.T01:intron 50.0%
CAGAGAAATGAGGCAGTGTG+GGG + Chr3:66970748-66970767 None:intergenic 50.0%
CAGTCGGGACAAACTTTAGC+AGG + Chr3:66967870-66967889 None:intergenic 50.0%
CATAGACAGACAGAGCAGTC+GGG + Chr3:66967885-66967904 None:intergenic 50.0%
CATGTGTGTGTGGTGGCTTA+TGG + Chr3:66974339-66974358 None:intergenic 50.0%
CCAATGACCATGAGGGAAGA+AGG - Chr3:66974584-66974603 MsG0380015217.01.T01:CDS 50.0%
CCAGCAGAGATACCAACTGA+GGG + Chr3:66973365-66973384 None:intergenic 50.0%
CCCCCAATCAACGAAGTCTT+AGG + Chr3:66967240-66967259 None:intergenic 50.0%
CCGACCGATGAATTTCCTCT+AGG - Chr3:66967365-66967384 MsG0380015217.01.T01:intron 50.0%
CCTTCTTCCCTCATGGTCAT+TGG + Chr3:66974587-66974606 None:intergenic 50.0%
CGATCGGAAGGCCCAAATAA+AGG + Chr3:66967742-66967761 None:intergenic 50.0%
CGCTTGAAAGTGAGTGGCAA+GGG + Chr3:66966690-66966709 None:intergenic 50.0%
CGGAATGGGAAGTTGACGAA+AGG - Chr3:66966934-66966953 MsG0380015217.01.T01:CDS 50.0%
CTAGGAAGGGGTTTGCATCA+AGG - Chr3:66967383-66967402 MsG0380015217.01.T01:intron 50.0%
CTGTTATTACCGGCGGCATA+GGG - Chr3:66967425-66967444 MsG0380015217.01.T01:intron 50.0%
CTTGAAAGTGAGTGGCAAGG+GGG + Chr3:66966688-66966707 None:intergenic 50.0%
GAAGGGACACAGAGAAAGCA+GGG - Chr3:66974223-66974242 MsG0380015217.01.T01:intron 50.0%
GACACAGAGAAAGCAGGGAA+AGG - Chr3:66974228-66974247 MsG0380015217.01.T01:intron 50.0%
GACTGTCTGGTTAGCAAAGC+CGG - Chr3:66967819-66967838 MsG0380015217.01.T01:intron 50.0%
GATGAGATCGTGGAGTTGCA+TGG - Chr3:66966453-66966472 MsG0380015217.01.T01:three_prime_UTR 50.0%
GCAACGAGCGTAGATTGACA+GGG - Chr3:66973955-66973974 MsG0380015217.01.T01:intron 50.0%
GCATAGACAGACAGAGCAGT+CGG + Chr3:66967886-66967905 None:intergenic 50.0%
GCTGCATGTCTCTTGTTGGT+GGG + Chr3:66972588-66972607 None:intergenic 50.0%
GCTTGAAAGTGAGTGGCAAG+GGG + Chr3:66966689-66966708 None:intergenic 50.0%
GGACTTGAGGAGCAAAGCAA+GGG - Chr3:66971695-66971714 MsG0380015217.01.T01:intron 50.0%
GGCGGCAATCAAGGTTATCT+TGG - Chr3:66966526-66966545 MsG0380015217.01.T01:three_prime_UTR 50.0%
GGGTCCTTGAAAATGGCTTG+TGG + Chr3:66972054-66972073 None:intergenic 50.0%
GGGTTGCTCGTTACATTTGG+AGG - Chr3:66973396-66973415 MsG0380015217.01.T01:intron 50.0%
GGTTGACCTCATTAGAGGGA+GGG + Chr3:66968953-66968972 None:intergenic 50.0%
GTGATGCCTGGTCAAGTAAG+TGG - Chr3:66973216-66973235 MsG0380015217.01.T01:intron 50.0%
GTTCTCTTCGAGACTGTGTC+TGG - Chr3:66967608-66967627 MsG0380015217.01.T01:intron 50.0%
GTTGTCGGAAGATGAGATCG+TGG - Chr3:66966443-66966462 MsG0380015217.01.T01:three_prime_UTR 50.0%
TACCAACTGAGGGACCAACT+TGG + Chr3:66973355-66973374 None:intergenic 50.0%
TAGAGGATCACTGAGGTTGC+TGG - Chr3:66973542-66973561 MsG0380015217.01.T01:intron 50.0%
TAGGGTGATTGGAATGGTGC+TGG - Chr3:66973725-66973744 MsG0380015217.01.T01:intron 50.0%
TATGCCGGCATCAACATCAG+TGG - Chr3:66973180-66973199 MsG0380015217.01.T01:intron 50.0%
TATTTGTACGCGGAGGGATG+TGG - Chr3:66968042-66968061 MsG0380015217.01.T01:CDS 50.0%
TCCACTTGGGAAGCTGTGAA+GGG + Chr3:66971855-66971874 None:intergenic 50.0%
TCGCTCTGTACGGTAAAGGA+CGG + Chr3:66969943-66969962 None:intergenic 50.0%
TCTCTCGCAACCAGTAGTCT+GGG + Chr3:66974692-66974711 None:intergenic 50.0%
TGATGCAAACCCCTTCCTAG+AGG + Chr3:66967383-66967402 None:intergenic 50.0%
TGATTGCCGCCAACAAATGC+TGG + Chr3:66966517-66966536 None:intergenic 50.0%
TGGACTTGAGGAGCAAAGCA+AGG - Chr3:66971694-66971713 MsG0380015217.01.T01:intron 50.0%
TGTGATGCATACACTCCAGC+TGG - Chr3:66972552-66972571 MsG0380015217.01.T01:intron 50.0%
TGTTGATGCCGGCATAAGAC+AGG + Chr3:66973176-66973195 None:intergenic 50.0%
TTACATCGTCACGTGTCTGC+TGG + Chr3:66969891-66969910 None:intergenic 50.0%
TTCCACTTGGGAAGCTGTGA+AGG + Chr3:66971856-66971875 None:intergenic 50.0%
TTCCGACTTTGTGGAGGAAG+TGG - Chr3:66967291-66967310 MsG0380015217.01.T01:intron 50.0%
TTGCAGACACCACCATTCTC+TGG - Chr3:66974310-66974329 MsG0380015217.01.T01:intron 50.0%
! ATTCCGTTTTGTCTAGCCGG+AGG - Chr3:66966583-66966602 MsG0380015217.01.T01:CDS 50.0%
! CACACATAAAGTGGGGGTAC+CGG - Chr3:66968491-66968510 MsG0380015217.01.T01:intron 50.0%
! CAGGATTGGTGGATCTGGTT+TGG - Chr3:66971674-66971693 MsG0380015217.01.T01:intron 50.0%
! CCTCTGGCTTGACTTGAAAG+AGG - Chr3:66966882-66966901 MsG0380015217.01.T01:intron 50.0%
! CCTCTTTCAAGTCAAGCCAG+AGG + Chr3:66966885-66966904 None:intergenic 50.0%
! CGGGCTACCATTGACTAACA+CGG + Chr3:66967348-66967367 None:intergenic 50.0%
! GAAGCTTGGGAAGAAGCACA+AGG - Chr3:66973908-66973927 MsG0380015217.01.T01:intron 50.0%
! GCAAAGCCGGGTTTTTCCTT+CGG - Chr3:66967832-66967851 MsG0380015217.01.T01:intron 50.0%
! GCATTTGTTGGCGGCAATCA+AGG - Chr3:66966517-66966536 MsG0380015217.01.T01:three_prime_UTR 50.0%
! GGAGGTATATTTGTACGCGG+AGG - Chr3:66968035-66968054 MsG0380015217.01.T01:CDS 50.0%
! GGGTCCTGTCTTTTGTGGAA+GGG - Chr3:66966750-66966769 MsG0380015217.01.T01:intron 50.0%
! GGTCCTGTCTTTTGTGGAAG+GGG - Chr3:66966751-66966770 MsG0380015217.01.T01:intron 50.0%
! GTCCTGTCTTTTGTGGAAGG+GGG - Chr3:66966752-66966771 MsG0380015217.01.T01:intron 50.0%
! TAAGGCATCCTTCTCTCTCG+AGG + Chr3:66969863-66969882 None:intergenic 50.0%
! TGAGTTTTCACCTGAGGTCC+AGG + Chr3:66972821-66972840 None:intergenic 50.0%
! TGGCTTTGCTAGGATAGAGG+GGG - Chr3:66968090-66968109 MsG0380015217.01.T01:CDS 50.0%
! TTCGGCGATGATTTTCTCGG+TGG + Chr3:66970937-66970956 None:intergenic 50.0%
!! ACACATAAAGTGGGGGTACC+GGG - Chr3:66968492-66968511 MsG0380015217.01.T01:intron 50.0%
!! CAGCCCACAAGCCATTTTCA+AGG - Chr3:66972047-66972066 MsG0380015217.01.T01:intron 50.0%
!! CATATGGGGTTAGTCGGTTG+GGG - Chr3:66974097-66974116 MsG0380015217.01.T01:intron 50.0%
!! GTGCGTCGATTAGAGTTGGA+AGG - Chr3:66974205-66974224 MsG0380015217.01.T01:intron 50.0%
!! GTGGATCTGGTTTGGACTTG+AGG - Chr3:66971682-66971701 MsG0380015217.01.T01:intron 50.0%
!! GTTTCGGGTCCTGTCTTTTG+TGG - Chr3:66966745-66966764 MsG0380015217.01.T01:intron 50.0%
!! TCTCTTCAGGTAACGGGATG+TGG - Chr3:66966280-66966299 MsG0380015217.01.T01:three_prime_UTR 50.0%
!! TTCCAAGTTGGTCCCTCAGT+TGG - Chr3:66973350-66973369 MsG0380015217.01.T01:intron 50.0%
!! TTGAAGGGTGTTGCAAACCG+TGG - Chr3:66974183-66974202 MsG0380015217.01.T01:intron 50.0%
!! TTTTGGGTGCAGACTCTACC+AGG - Chr3:66971817-66971836 MsG0380015217.01.T01:intron 50.0%
ACCCTTCACAGCTTCCCAAG+TGG - Chr3:66971851-66971870 MsG0380015217.01.T01:intron 55.0%
AGCCATCAAACGCACCCTAC+AGG + Chr3:66969172-66969191 None:intergenic 55.0%
ATGCTCTCGTGCACTCCAGT+AGG + Chr3:66968974-66968993 None:intergenic 55.0%
CAAGAACCGCCCGCAAAACA+AGG + Chr3:66967589-66967608 None:intergenic 55.0%
CCTATGCCGCCGGTAATAAC+AGG + Chr3:66967427-66967446 None:intergenic 55.0%
CCTCCCTTTACCATCAAGGG+CGG + Chr3:66966416-66966435 None:intergenic 55.0%
CCTGTTATTACCGGCGGCAT+AGG - Chr3:66967424-66967443 MsG0380015217.01.T01:intron 55.0%
CGACCACCGAAGGAAAAACC+CGG + Chr3:66967841-66967860 None:intergenic 55.0%
CTCTCGCAACCAGTAGTCTG+GGG + Chr3:66974691-66974710 None:intergenic 55.0%
CTCTCTCGCAACCAGTAGTC+TGG + Chr3:66974693-66974712 None:intergenic 55.0%
GAAGGGTCAGTAACTGGACC+TGG + Chr3:66971838-66971857 None:intergenic 55.0%
GATCACTGAGGTTGCTGGTG+TGG - Chr3:66973547-66973566 MsG0380015217.01.T01:intron 55.0%
GCAAAATGTGGATAGGCCGG+TGG - Chr3:66966709-66966728 MsG0380015217.01.T01:intron 55.0%
GCCGCCGGTAATAACAGGAA+GGG + Chr3:66967422-66967441 None:intergenic 55.0%
GCGCTTGAAAGTGAGTGGCA+AGG + Chr3:66966691-66966710 None:intergenic 55.0%
GGAAGGGACACAGAGAAAGC+AGG - Chr3:66974222-66974241 MsG0380015217.01.T01:intron 55.0%
GGCAACGAGCGTAGATTGAC+AGG - Chr3:66973954-66973973 MsG0380015217.01.T01:intron 55.0%
GGCAGCTGCATGTCTCTTGT+TGG + Chr3:66972592-66972611 None:intergenic 55.0%
GGCTTTGCTAGGATAGAGGG+GGG - Chr3:66968091-66968110 MsG0380015217.01.T01:CDS 55.0%
GGGACCATACTATGTGGTGC+TGG - Chr3:66973104-66973123 MsG0380015217.01.T01:intron 55.0%
GGTCCAGGAAAACCACCAAC+TGG + Chr3:66972806-66972825 None:intergenic 55.0%
GTGCCTCCGGCTAGACAAAA+CGG + Chr3:66966589-66966608 None:intergenic 55.0%
TATTTGGGCCTTCCGATCGG+TGG - Chr3:66967743-66967762 MsG0380015217.01.T01:CDS 55.0%
TCGGTGGTTTCGGAGAGTCA+AGG + Chr3:66970921-66970940 None:intergenic 55.0%
TGACCATGAGGGAAGAAGGC+AGG - Chr3:66974588-66974607 MsG0380015217.01.T01:CDS 55.0%
TGCCCCCTTCCACAAAAGAC+AGG + Chr3:66966757-66966776 None:intergenic 55.0%
TGCCGCCGGTAATAACAGGA+AGG + Chr3:66967423-66967442 None:intergenic 55.0%
! AAGCCGGGTTTTTCCTTCGG+TGG - Chr3:66967835-66967854 MsG0380015217.01.T01:intron 55.0%
! CCCTCAGTTGGTATCTCTGC+TGG - Chr3:66973362-66973381 MsG0380015217.01.T01:intron 55.0%
! CGGGTCCTGTCTTTTGTGGA+AGG - Chr3:66966749-66966768 MsG0380015217.01.T01:intron 55.0%
! GTAGGGTGCGTTTGATGGCT+AGG - Chr3:66969172-66969191 MsG0380015217.01.T01:intron 55.0%
! TGGCCGCCCTTGATGGTAAA+GGG - Chr3:66966410-66966429 MsG0380015217.01.T01:three_prime_UTR 55.0%
! TGGGTTGAACCCCAGACTAC+TGG - Chr3:66974679-66974698 MsG0380015217.01.T01:CDS 55.0%
! TGGTGGTTTTCCTGGACCTC+AGG - Chr3:66972808-66972827 MsG0380015217.01.T01:intron 55.0%
! TTGGCCGCCCTTGATGGTAA+AGG - Chr3:66966409-66966428 MsG0380015217.01.T01:three_prime_UTR 55.0%
!! ATGTGGTGCTGGTGCTGACA+AGG - Chr3:66973115-66973134 MsG0380015217.01.T01:intron 55.0%
!! CACATAAAGTGGGGGTACCG+GGG - Chr3:66968493-66968512 MsG0380015217.01.T01:intron 55.0%
!! CGTGGTGCGTCGATTAGAGT+TGG - Chr3:66974201-66974220 MsG0380015217.01.T01:intron 55.0%
!! GATTTTGGTGGGCGGTTCAC+TGG - Chr3:66966626-66966645 MsG0380015217.01.T01:CDS 55.0%
!! GCTGGTGCTGACAAGGCATT+TGG - Chr3:66973122-66973141 MsG0380015217.01.T01:intron 55.0%
!!! TGGCCAGTTGGTGGTTTTCC+TGG - Chr3:66972800-66972819 MsG0380015217.01.T01:intron 55.0%
AGGGGGAGAAGACAGCCTGA+TGG + Chr3:66966671-66966690 None:intergenic 60.0%
CAGGATCAAGCGACCACCGA+AGG + Chr3:66967851-66967870 None:intergenic 60.0%
CCACCAACTGGCCAACCAAG+AGG + Chr3:66972794-66972813 None:intergenic 60.0%
TCCAGCACAGGTCAAGCTCC+TGG - Chr3:66971886-66971905 MsG0380015217.01.T01:intron 60.0%
TCCAGGAGCTTGACCTGTGC+TGG + Chr3:66971890-66971909 None:intergenic 60.0%
! CCGCCCTTGATGGTAAAGGG+AGG - Chr3:66966413-66966432 MsG0380015217.01.T01:three_prime_UTR 60.0%
! CCTCTTGGTTGGCCAGTTGG+TGG - Chr3:66972791-66972810 MsG0380015217.01.T01:intron 60.0%
! CTGCGCGGATTACCACCGAT+CGG + Chr3:66967758-66967777 None:intergenic 60.0%
! GCGGATTACCACCGATCGGA+AGG + Chr3:66967754-66967773 None:intergenic 60.0%
! TGGCCTCTTGGTTGGCCAGT+TGG - Chr3:66972788-66972807 MsG0380015217.01.T01:intron 60.0%
! TTTGGTGGGCGGTTCACTGG+TGG - Chr3:66966629-66966648 MsG0380015217.01.T01:CDS 60.0%
!! TTTTTGGGGAGGAGGGGGGT+GGG - Chr3:66967976-66967995 MsG0380015217.01.T01:intron 60.0%
!!! TTTTTTGGGGAGGAGGGGGG+TGG - Chr3:66967975-66967994 MsG0380015217.01.T01:intron 60.0%
CGATCGGTGGTAATCCGCGC+AGG - Chr3:66967756-66967775 MsG0380015217.01.T01:CDS 65.0%
GGGCGTGCAACTCGTCCATC+AGG - Chr3:66966653-66966672 MsG0380015217.01.T01:CDS 65.0%
GGTGGGGGGGTGAGGATCAT+AGG - Chr3:66967993-66968012 MsG0380015217.01.T01:CDS 65.0%
GTGGGCGGTTCACTGGTGGA+GGG - Chr3:66966633-66966652 MsG0380015217.01.T01:CDS 65.0%
! GACAGGTTGGCCGCCCTTGA+TGG - Chr3:66966403-66966422 MsG0380015217.01.T01:three_prime_UTR 65.0%
! GTGGGAATGGGCTCTCCAGC+TGG + Chr3:66972570-66972589 None:intergenic 65.0%
!! TTTTGGGGAGGAGGGGGGTG+GGG - Chr3:66967977-66967996 MsG0380015217.01.T01:intron 65.0%
GGTGGGCGGTTCACTGGTGG+AGG - Chr3:66966632-66966651 MsG0380015217.01.T01:CDS 70.0%
TTTGGGGAGGAGGGGGGTGG+GGG - Chr3:66967978-66967997 MsG0380015217.01.T01:intron 70.0%
TTGGGGAGGAGGGGGGTGGG+GGG - Chr3:66967979-66967998 MsG0380015217.01.T01:intron 75.0%
! AGGAGGGGGGTGGGGGGGTG+AGG - Chr3:66967985-66968004 MsG0380015217.01.T01:intron 80.0%
! TGGGGAGGAGGGGGGTGGGG+GGG - Chr3:66967980-66967999 MsG0380015217.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 66966154 66974762 66966154 ID=MsG0380015217.01;Name=MsG0380015217.01
Chr3 mRNA 66966154 66974762 66966154 ID=MsG0380015217.01.T01;Parent=MsG0380015217.01;Name=MsG0380015217.01.T01;_AED=0.36;_eAED=0.39;_QI=0|0.57|0.6|1|0.92|0.86|15|391|490
Chr3 exon 66966154 66966191 66966154 ID=MsG0380015217.01.T01:exon:56;Parent=MsG0380015217.01.T01
Chr3 exon 66966222 66966727 66966222 ID=MsG0380015217.01.T01:exon:55;Parent=MsG0380015217.01.T01
Chr3 exon 66966903 66967062 66966903 ID=MsG0380015217.01.T01:exon:54;Parent=MsG0380015217.01.T01
Chr3 exon 66967151 66967188 66967151 ID=MsG0380015217.01.T01:exon:53;Parent=MsG0380015217.01.T01
Chr3 exon 66967318 66967371 66967318 ID=MsG0380015217.01.T01:exon:52;Parent=MsG0380015217.01.T01
Chr3 exon 66967533 66967572 66967533 ID=MsG0380015217.01.T01:exon:51;Parent=MsG0380015217.01.T01
Chr3 exon 66967706 66967811 66967706 ID=MsG0380015217.01.T01:exon:50;Parent=MsG0380015217.01.T01
Chr3 exon 66967993 66968171 66967993 ID=MsG0380015217.01.T01:exon:49;Parent=MsG0380015217.01.T01
Chr3 exon 66968264 66968370 66968264 ID=MsG0380015217.01.T01:exon:48;Parent=MsG0380015217.01.T01
Chr3 exon 66968818 66968866 66968818 ID=MsG0380015217.01.T01:exon:47;Parent=MsG0380015217.01.T01
Chr3 exon 66968984 66969087 66968984 ID=MsG0380015217.01.T01:exon:46;Parent=MsG0380015217.01.T01
Chr3 exon 66969200 66969239 66969200 ID=MsG0380015217.01.T01:exon:45;Parent=MsG0380015217.01.T01
Chr3 exon 66973568 66973643 66973568 ID=MsG0380015217.01.T01:exon:44;Parent=MsG0380015217.01.T01
Chr3 exon 66973728 66973773 66973728 ID=MsG0380015217.01.T01:exon:43;Parent=MsG0380015217.01.T01
Chr3 exon 66974442 66974762 66974442 ID=MsG0380015217.01.T01:exon:42;Parent=MsG0380015217.01.T01
Chr3 CDS 66974442 66974762 66974442 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66973728 66973773 66973728 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66973568 66973643 66973568 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66969200 66969239 66969200 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66968984 66969087 66968984 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66968818 66968866 66968818 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66968264 66968370 66968264 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66967993 66968171 66967993 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66967706 66967811 66967706 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66967533 66967572 66967533 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66967318 66967371 66967318 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66967151 66967188 66967151 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66966903 66967062 66966903 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 CDS 66966575 66966727 66966575 ID=MsG0380015217.01.T01:cds;Parent=MsG0380015217.01.T01
Chr3 three_prime_UTR 66966222 66966574 66966222 ID=MsG0380015217.01.T01:three_prime_utr;Parent=MsG0380015217.01.T01
Chr3 three_prime_UTR 66966154 66966191 66966154 ID=MsG0380015217.01.T01:three_prime_utr;Parent=MsG0380015217.01.T01
Gene Sequence

>MsG0380015217.01.T01

ATGTCCGACCATTTCCGGTTGGTGTTATCAGTTGATGAAGAAAATTGGGGTCTTAGGCCCTCTCGAATGTTGAAATGCTGGCAAGATACACCTGGTTACAAACAATTTGTCAGTAACAAATGGAAATCTCTTCAGGTAACGGGATGTGGCTACGTTTTGAAAGAAAAATTTAAATTACTTAAGAAGGCGTTGAAGGAGTGGCACGTATCCCATACTCATAATTTGCCGGAGAAGATTGCTTCTCTTAAGGACAGGTTGGCCGCCCTTGATGGTAAAGGGAGGAGAAGGAGTTGTCGGAAGATGAGATCGTGGAGTTGCATGATTCTTGATGGGATACTGATAGCTAATAAGGTGGTGGATGAGGCTCTTATGGAAAGAATGTCTTTTCCGACTTTGTGGAGGAAGTGGATTAAGGAGTGTGTAACTACGGCTACCGTTTCCGTGATTGGTGGATCTGGTTTGGACTTGAGGAGCAAAGCAAGGACTCTACCAGGTCCAGTTACTGACCCTTCACAGCTTCCCAAGTGGAACTATGATGGTTCCAGCACAGGTCAAGCTCCTGGAGAAGATAGTGAAGTTATTATCTACCCACAAGCCATTTTCAAGGACCCATTTAGAAGGGGTAACAATATCTTGGTTATGTGTGATGCATACACTCCAGCTGGAGAGCCCATTCCCACCAACAAGAGACATGCAGCTGCCAAGATTTTCAGCCATCCTGATGTTGTTGCTGAAGTACCATGGTATGGTATTGAGCAAGAATACCTTGTGCAGAAAGACATCAATTGGCCTCTTGGTTGGCCAGTTGGTGGTTTTCCTGGACCTCAGGTGAAAACTCACTTTCATTCATCATTACTGTTTTTATTTTATTTTCAAGCTAGTCACTTACACAATCATATAAGAAAATGGTGTGACCATGGTGGGACCATACTATGTGGTGCTGGTGCTGACAAGGCATTTGGCCGTGACATGTTGACTCACATTACAAAGCCTGTCTTATGCCGGCATCAACATCAGTGGAATCAATGTGGGAATTCCAAGTTGGTCCCTCAGTTGGTATCTCTGCTGAGGATCACTGAGGTTGCTGGTGTGGTGCTTTCCTTTGACCCAAAACCAATTAAGGGTGATTGGAATGGTGCTGGTGCTCACACAAATTACAGCACCAAGTCTATGAGAGAAGATGGTGGCTATGAAGTCATCTTGAAAGCAATTGAGAAGCTTGGGAAGAAGCACAAGGAGCACATTGCTGCTTATGGAGAAGGCAACGAGCGTAGATTGACAGGGCGACATGAGACAGCTGACATTAACACCTTCTTATGGGGTGTTGCAAACCGTGGTGCGTCGATTAGAGTTGGAAGGGACACAGAGAAAGCAGGGAAAGGTTATTTCGAGGATAGGAGGCCATCATCTAACATGGATCCATATGTTGTTACTTCCATGATTGCAGACACCACCATTCTCTGGAAACCATAA
Protein sequence

>MsG0380015217.01.T01

MSDHFRLVLSVDEENWGLRPSRMLKCWQDTPGYKQFVSNKWKSLQVTGCGYVLKEKFKLLKKALKEWHVSHTHNLPEKIASLKDRLAALDGKGRRRSCRKMRSWSCMILDGILIANKVVDEALMERMSFPTLWRKWIKECVTTATVSVIGGSGLDLRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGEDSEVIIYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHPDVVAEVPWYGIEQEYLVQKDINWPLGWPVGGFPGPQVKTHFHSSLLFLFYFQASHLHNHIRKWCDHGGTILCGAGADKAFGRDMLTHITKPVLCRHQHQWNQCGNSKLVPQLVSLLRITEVAGVVLSFDPKPIKGDWNGAGAHTNYSTKSMREDGGYEVILKAIEKLGKKHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPSSNMDPYVVTSMIADTTILWKP*