Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010444.01.T01 | RHN79211.1 | 63.899 | 277 | 74 | 4 | 82 | 355 | 9 | 262 | 9.37E-123 | 364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010444.01.T01 | A0A396JR61 | 63.899 | 277 | 74 | 4 | 82 | 355 | 9 | 262 | 4.47e-123 | 364 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280010444.01 | MsG0680035896.01 | 0.808149 | 3.569946e-50 | 2.025799e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010444.01.T01 | MTR_0126s0010 | 56.209 | 306 | 119 | 3 | 53 | 355 | 19 | 312 | 1.68e-119 | 348 |
| MsG0280010444.01.T01 | MTR_7g070630 | 51.212 | 330 | 149 | 4 | 16 | 333 | 82 | 411 | 1.46e-110 | 330 |
| MsG0280010444.01.T01 | MTR_3g455890 | 48.235 | 340 | 143 | 2 | 5 | 333 | 87 | 404 | 3.19e-101 | 305 |
| MsG0280010444.01.T01 | MTR_5g079810 | 45.970 | 335 | 143 | 6 | 13 | 333 | 1 | 311 | 6.09e-92 | 279 |
| MsG0280010444.01.T01 | MTR_3g080720 | 46.847 | 333 | 152 | 4 | 5 | 331 | 87 | 400 | 6.63e-89 | 274 |
| MsG0280010444.01.T01 | MTR_8g469580 | 36.570 | 309 | 171 | 7 | 1 | 299 | 81 | 374 | 2.75e-55 | 188 |
| MsG0280010444.01.T01 | MTR_1g044605 | 35.455 | 330 | 187 | 10 | 6 | 324 | 69 | 383 | 4.64e-55 | 186 |
| MsG0280010444.01.T01 | MTR_8g056180 | 34.195 | 348 | 200 | 11 | 13 | 346 | 1 | 333 | 1.46e-54 | 182 |
| MsG0280010444.01.T01 | MTR_0084s0060 | 35.866 | 329 | 102 | 5 | 5 | 333 | 87 | 306 | 1.57e-54 | 182 |
| MsG0280010444.01.T01 | MTR_6g065960 | 56.774 | 155 | 54 | 4 | 21 | 162 | 41 | 195 | 2.06e-48 | 166 |
| MsG0280010444.01.T01 | MTR_6g088860 | 35.047 | 214 | 129 | 5 | 13 | 217 | 1 | 213 | 2.72e-32 | 121 |
| MsG0280010444.01.T01 | MTR_6g466450 | 35.047 | 214 | 129 | 5 | 13 | 217 | 1 | 213 | 2.72e-32 | 121 |
| MsG0280010444.01.T01 | MTR_1g052090 | 27.299 | 348 | 182 | 11 | 6 | 346 | 71 | 354 | 6.76e-32 | 123 |
| MsG0280010444.01.T01 | MTR_6g463930 | 26.814 | 317 | 189 | 7 | 1 | 310 | 74 | 354 | 5.16e-29 | 117 |
| MsG0280010444.01.T01 | MTR_5g095330 | 34.171 | 199 | 109 | 6 | 1 | 181 | 63 | 257 | 9.64e-27 | 107 |
| MsG0280010444.01.T01 | MTR_5g039510 | 34.375 | 192 | 112 | 6 | 5 | 186 | 40 | 227 | 6.97e-23 | 99.4 |
| MsG0280010444.01.T01 | MTR_5g095400 | 32.642 | 193 | 114 | 6 | 1 | 181 | 327 | 515 | 1.48e-22 | 99.4 |
| MsG0280010444.01.T01 | MTR_5g095430 | 33.163 | 196 | 115 | 6 | 1 | 184 | 318 | 509 | 2.14e-22 | 98.6 |
| MsG0280010444.01.T01 | MTR_5g095310 | 36.111 | 144 | 82 | 4 | 35 | 171 | 222 | 362 | 1.72e-19 | 89.0 |
| MsG0280010444.01.T01 | MTR_5g095270 | 34.899 | 149 | 87 | 4 | 35 | 176 | 32 | 177 | 1.79e-17 | 79.7 |
| MsG0280010444.01.T01 | MTR_5g039515 | 32.558 | 172 | 100 | 6 | 25 | 184 | 4 | 171 | 2.74e-17 | 82.0 |
| MsG0280010444.01.T01 | MTR_6g023550 | 31.325 | 166 | 93 | 4 | 2 | 158 | 160 | 313 | 1.90e-15 | 76.6 |
| MsG0280010444.01.T01 | MTR_4g027155 | 29.697 | 165 | 92 | 6 | 2 | 152 | 58 | 212 | 2.00e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 112 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGGTGATGATGTGGATA+TGG | 0.285793 | 2:+69726053 | MsG0280010444.01.T01:CDS |
| AAAGGAAACAAGTCGGTCTA+TGG | 0.299461 | 2:+69725499 | MsG0280010444.01.T01:CDS |
| AAGCCCCTGGCCTACACATT+TGG | 0.302529 | 2:-69725273 | None:intergenic |
| GGCATGGGAGCATGATTAAT+TGG | 0.311432 | 2:+69725521 | MsG0280010444.01.T01:CDS |
| ACCGCAGCAGCCACCACAAA+TGG | 0.329587 | 2:+69725690 | MsG0280010444.01.T01:CDS |
| CTCCGAACTGCACACTCTTC+AGG | 0.336621 | 2:-69725196 | None:intergenic |
| ACAGACTTGTTATTCTCTTC+CGG | 0.355973 | 2:-69725055 | None:intergenic |
| GATAAAATCAACAACTTGCT+TGG | 0.356027 | 2:+69725163 | MsG0280010444.01.T01:CDS |
| ACAAAAGATGCCCACGCCTT+TGG | 0.362019 | 2:-69725343 | None:intergenic |
| ATATGTTCAGTTCTGCTAAC+TGG | 0.364956 | 2:+69725776 | MsG0280010444.01.T01:CDS |
| CCCTCTCCATGCTCCATTTG+TGG | 0.374560 | 2:-69725703 | None:intergenic |
| TGTGTAGGCCAGGGGCTTCA+TGG | 0.374670 | 2:+69725278 | MsG0280010444.01.T01:CDS |
| CTATTCAAACGCTCGTTTCA+CGG | 0.376809 | 2:+69725090 | MsG0280010444.01.T01:CDS |
| GCCTATCACGGACAAGACTA+TGG | 0.381728 | 2:+69725603 | MsG0280010444.01.T01:CDS |
| TGACAAGTCTAGGGAGTCTA+TGG | 0.383982 | 2:+69725909 | MsG0280010444.01.T01:CDS |
| AGCCCCTGGCCTACACATTT+GGG | 0.388071 | 2:-69725272 | None:intergenic |
| GATGCTGATGACTTCTTTGA+TGG | 0.388623 | 2:+69726015 | MsG0280010444.01.T01:CDS |
| CTTGCCCAAATGTGTAGGCC+AGG | 0.391215 | 2:+69725268 | MsG0280010444.01.T01:CDS |
| TGCTGCGGTGGTGGTGCCTC+AGG | 0.400601 | 2:-69725676 | None:intergenic |
| ATAAAATCAACAACTTGCTT+GGG | 0.402780 | 2:+69725164 | MsG0280010444.01.T01:CDS |
| TCTAGAACCATAGGATGAAC+TGG | 0.414295 | 2:-69725751 | None:intergenic |
| TGCAAACATATGAATGTTGT+TGG | 0.422524 | 2:-69725476 | None:intergenic |
| GGTGGTGATGATGTGGATAT+GGG | 0.425264 | 2:+69726054 | MsG0280010444.01.T01:CDS |
| GACTTCTTTGATGGGATACT+CGG | 0.428001 | 2:+69726024 | MsG0280010444.01.T01:CDS |
| AACATTCATATGTTTGCAAA+AGG | 0.433123 | 2:+69725481 | MsG0280010444.01.T01:CDS |
| TTACCCTCCAGTTCATCCTA+TGG | 0.445154 | 2:+69725744 | MsG0280010444.01.T01:CDS |
| GATGCCCACGCCTTTGGAAT+GGG | 0.447159 | 2:-69725337 | None:intergenic |
| CTCTCATAAGACCCGGTGAT+AGG | 0.449163 | 2:-69725883 | None:intergenic |
| GGGCTTCATGGAAGAGGGCT+AGG | 0.455130 | 2:+69725290 | MsG0280010444.01.T01:CDS |
| GGGATACTCGGGACTGGTGG+TGG | 0.455790 | 2:+69726036 | MsG0280010444.01.T01:CDS |
| CAATGCTTCGTGAGAGAGGA+TGG | 0.459561 | 2:+69725011 | None:intergenic |
| ATCACTGATGATTTCGAGGC+AGG | 0.465692 | 2:+69725982 | MsG0280010444.01.T01:CDS |
| GGCCAGGGGCTTCATGGAAG+AGG | 0.467552 | 2:+69725284 | MsG0280010444.01.T01:CDS |
| GCCCTCTTCCATGAAGCCCC+TGG | 0.470680 | 2:-69725286 | None:intergenic |
| CTCCGCTGAGTTTGCTGCAG+AGG | 0.472577 | 2:+69725843 | MsG0280010444.01.T01:CDS |
| ATGAGAGGTTTGACAAGTCT+AGG | 0.474360 | 2:+69725899 | MsG0280010444.01.T01:CDS |
| TTGCCCAAATGTGTAGGCCA+GGG | 0.474952 | 2:+69725269 | MsG0280010444.01.T01:CDS |
| TGTGGTGGCTGCTGCGGTGG+TGG | 0.481199 | 2:-69725685 | None:intergenic |
| AATCAACAACTTGCTTGGGT+TGG | 0.482141 | 2:+69725168 | MsG0280010444.01.T01:CDS |
| TCCATAGTCTTGTCCGTGAT+AGG | 0.488276 | 2:-69725604 | None:intergenic |
| TGAAAGCAGCATATCGCTCT+TGG | 0.488614 | 2:-69725948 | None:intergenic |
| GAAGCTGGTGCAAGAATTTG+AGG | 0.495546 | 2:+69725555 | MsG0280010444.01.T01:CDS |
| AACAAGTCGGTCTATGGGCA+TGG | 0.507379 | 2:+69725505 | MsG0280010444.01.T01:CDS |
| AGATGCCCACGCCTTTGGAA+TGG | 0.508784 | 2:-69725338 | None:intergenic |
| ATTTGTGGTGGCTGCTGCGG+TGG | 0.517565 | 2:-69725688 | None:intergenic |
| GAATAACAAGTCTGTTGTGA+TGG | 0.526270 | 2:+69725063 | MsG0280010444.01.T01:CDS |
| CTCCTGAAGAGTGTGCAGTT+CGG | 0.527152 | 2:+69725194 | MsG0280010444.01.T01:CDS |
| TGCAGTTCGGAGGTTGGAAA+GGG | 0.528126 | 2:+69725207 | MsG0280010444.01.T01:CDS |
| TCCATTTGTGGTGGCTGCTG+CGG | 0.530448 | 2:-69725691 | None:intergenic |
| GATCAACAACACATTAATGT+TGG | 0.531318 | 2:+69725442 | MsG0280010444.01.T01:CDS |
| AAAGTTGGGGTGATGATCGA+TGG | 0.531489 | 2:+69725236 | MsG0280010444.01.T01:CDS |
| ACAGTGAGCACTTGCTTGAG+AGG | 0.534418 | 2:-69725406 | None:intergenic |
| CTGCAGAGGCACAGATGCAT+AGG | 0.534655 | 2:+69725857 | MsG0280010444.01.T01:CDS |
| AAGGAAACAAGTCGGTCTAT+GGG | 0.537416 | 2:+69725500 | MsG0280010444.01.T01:CDS |
| GACTGGTGGTGGTGATGATG+TGG | 0.537766 | 2:+69726047 | MsG0280010444.01.T01:CDS |
| GGAGATCACTGATGATTTCG+AGG | 0.539074 | 2:+69725978 | MsG0280010444.01.T01:CDS |
| AGTCTTGTCCGTGATAGGCT+TGG | 0.539905 | 2:-69725599 | None:intergenic |
| GTGCAGTTCGGAGGTTGGAA+AGG | 0.540489 | 2:+69725206 | MsG0280010444.01.T01:CDS |
| TGCCCAAATGTGTAGGCCAG+GGG | 0.541731 | 2:+69725270 | MsG0280010444.01.T01:CDS |
| TGAGAGGTTTGACAAGTCTA+GGG | 0.544498 | 2:+69725900 | MsG0280010444.01.T01:CDS |
| CTTGTCCGTGATAGGCTTGG+TGG | 0.549161 | 2:-69725596 | None:intergenic |
| ATATGCTGCTTTCATGAAGA+AGG | 0.551879 | 2:+69725957 | MsG0280010444.01.T01:CDS |
| ATGCATAGGAGGCCTATCAC+CGG | 0.552390 | 2:+69725871 | MsG0280010444.01.T01:CDS |
| AGAATTGAATAGCATGGTAC+CGG | 0.554868 | 2:+69725036 | MsG0280010444.01.T01:CDS |
| GCAAACTCAGCGGAGAACCT+CGG | 0.557568 | 2:-69725835 | None:intergenic |
| AGAGTGTGCAGTTCGGAGGT+TGG | 0.557579 | 2:+69725201 | MsG0280010444.01.T01:CDS |
| TGATTTCGAGGCAGGAGAGA+AGG | 0.560864 | 2:+69725990 | MsG0280010444.01.T01:CDS |
| TTTGATGGGATACTCGGGAC+TGG | 0.560872 | 2:+69726030 | MsG0280010444.01.T01:CDS |
| CAGAGGCACAGATGCATAGG+AGG | 0.562785 | 2:+69725860 | MsG0280010444.01.T01:CDS |
| TGATGATGTGGATATGGGAC+TGG | 0.563536 | 2:+69726059 | MsG0280010444.01.T01:CDS |
| ACAAGTCGGTCTATGGGCAT+GGG | 0.580666 | 2:+69725506 | MsG0280010444.01.T01:CDS |
| TGCATAGGAGGCCTATCACC+GGG | 0.585016 | 2:+69725872 | MsG0280010444.01.T01:CDS |
| AACATATACTCTAGAACCAT+AGG | 0.585231 | 2:-69725760 | None:intergenic |
| GACACAATGCTTCGTGAGAG+AGG | 0.590542 | 2:+69725007 | None:intergenic |
| TTTGCCCATTCCAAAGGCGT+GGG | 0.591481 | 2:+69725333 | MsG0280010444.01.T01:CDS |
| GGAGAGGGTAGTAGTCATCA+TGG | 0.591530 | 2:+69725718 | MsG0280010444.01.T01:CDS |
| TCCGTGATAGGCTTGGTGGT+CGG | 0.594913 | 2:-69725592 | None:intergenic |
| AAATATCAGTCGTATGTGCG+AGG | 0.595710 | 2:+69725118 | MsG0280010444.01.T01:CDS |
| CAGCCACCACAAATGGAGCA+TGG | 0.599216 | 2:+69725697 | MsG0280010444.01.T01:CDS |
| GCCAGGGGCTTCATGGAAGA+GGG | 0.599565 | 2:+69725285 | MsG0280010444.01.T01:CDS |
| CTATCACCGGGTCTTATGAG+AGG | 0.599958 | 2:+69725884 | MsG0280010444.01.T01:CDS |
| TTGGCTATGTGAAAAGAAGC+TGG | 0.602663 | 2:+69725540 | MsG0280010444.01.T01:CDS |
| CTGAAGAGTGTGCAGTTCGG+AGG | 0.604115 | 2:+69725197 | MsG0280010444.01.T01:CDS |
| ATGCTGATGACTTCTTTGAT+GGG | 0.605977 | 2:+69726016 | MsG0280010444.01.T01:CDS |
| TCATGTGGGTTAACCGTCCG+AGG | 0.607395 | 2:+69725818 | MsG0280010444.01.T01:CDS |
| TCTCCATGCTCCATTTGTGG+TGG | 0.609137 | 2:-69725700 | None:intergenic |
| CCACAAATGGAGCATGGAGA+GGG | 0.610615 | 2:+69725703 | MsG0280010444.01.T01:CDS |
| TCCGACCACCAAGCCTATCA+CGG | 0.613273 | 2:+69725591 | MsG0280010444.01.T01:CDS |
| ACTTCTTTGATGGGATACTC+GGG | 0.617054 | 2:+69726025 | MsG0280010444.01.T01:CDS |
| GATGGGATACTCGGGACTGG+TGG | 0.618786 | 2:+69726033 | MsG0280010444.01.T01:CDS |
| ATGAGACCTCTGATCTCATG+TGG | 0.619170 | 2:+69725803 | MsG0280010444.01.T01:CDS |
| GAGTATATGCGAAGGAGAAG+TGG | 0.619427 | 2:+69725649 | MsG0280010444.01.T01:CDS |
| AAGCTGGTGCAAGAATTTGA+GGG | 0.626729 | 2:+69725556 | MsG0280010444.01.T01:CDS |
| ATGGGAAGAATTGAATAGCA+TGG | 0.631333 | 2:+69725030 | MsG0280010444.01.T01:CDS |
| GTCAAACCTCTCATAAGACC+CGG | 0.632159 | 2:-69725890 | None:intergenic |
| ACCACAAATGGAGCATGGAG+AGG | 0.637646 | 2:+69725702 | MsG0280010444.01.T01:CDS |
| AGTTGCTTGCCCAAATGTGT+AGG | 0.641144 | 2:+69725263 | MsG0280010444.01.T01:CDS |
| AAGGAGAAGTGGTGAACCTG+AGG | 0.644155 | 2:+69725660 | MsG0280010444.01.T01:CDS |
| AAGTTGGGGTGATGATCGAT+GGG | 0.645680 | 2:+69725237 | MsG0280010444.01.T01:CDS |
| AATGCTTCGTGAGAGAGGAT+GGG | 0.650431 | 2:+69725012 | None:intergenic |
| ATATGGGACTGGATCACTGA+GGG | 0.653576 | 2:+69726070 | MsG0280010444.01.T01:CDS |
| AATATCAGTCGTATGTGCGA+GGG | 0.655499 | 2:+69725119 | MsG0280010444.01.T01:CDS |
| GTTTGCAAAAGGAAACAAGT+CGG | 0.660940 | 2:+69725492 | MsG0280010444.01.T01:CDS |
| AGAACCATAGGATGAACTGG+AGG | 0.665899 | 2:-69725748 | None:intergenic |
| TGCCTCTGCAGCAAACTCAG+CGG | 0.675090 | 2:-69725845 | None:intergenic |
| TCAGTCGTATGTGCGAGGGA+AGG | 0.675421 | 2:+69725123 | MsG0280010444.01.T01:CDS |
| GAACCATAGGATGAACTGGA+GGG | 0.675620 | 2:-69725747 | None:intergenic |
| AATATGCTGAGTATATGCGA+AGG | 0.677291 | 2:+69725641 | MsG0280010444.01.T01:CDS |
| GTTAACCCACATGAGATCAG+AGG | 0.698010 | 2:-69725809 | None:intergenic |
| ACTCAGCGGAGAACCTCGGA+CGG | 0.706523 | 2:-69725831 | None:intergenic |
| TGAGACCTCTGATCTCATGT+GGG | 0.715752 | 2:+69725804 | MsG0280010444.01.T01:CDS |
| GATATGGGACTGGATCACTG+AGG | 0.778301 | 2:+69726069 | MsG0280010444.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AACATTCATATGTTTGCAAA+AGG | + | Chr2:69725481-69725500 | MsG0280010444.01.T01:CDS | 25.0% |
| !! | ATAAAATCAACAACTTGCTT+GGG | + | Chr2:69725164-69725183 | MsG0280010444.01.T01:CDS | 25.0% |
| GATCAACAACACATTAATGT+TGG | + | Chr2:69725442-69725461 | MsG0280010444.01.T01:CDS | 30.0% | |
| TGCAAACATATGAATGTTGT+TGG | - | Chr2:69725479-69725498 | None:intergenic | 30.0% | |
| ! | GATAAAATCAACAACTTGCT+TGG | + | Chr2:69725163-69725182 | MsG0280010444.01.T01:CDS | 30.0% |
| !! | AACATATACTCTAGAACCAT+AGG | - | Chr2:69725763-69725782 | None:intergenic | 30.0% |
| !!! | AGCAAGTTGTTGATTTTATC+AGG | - | Chr2:69725163-69725182 | None:intergenic | 30.0% |
| !!! | GCAAGTTGTTGATTTTATCA+GGG | - | Chr2:69725162-69725181 | None:intergenic | 30.0% |
| AATATGCTGAGTATATGCGA+AGG | + | Chr2:69725641-69725660 | MsG0280010444.01.T01:CDS | 35.0% | |
| AGAATTGAATAGCATGGTAC+CGG | + | Chr2:69725036-69725055 | MsG0280010444.01.T01:CDS | 35.0% | |
| ATATGTTCAGTTCTGCTAAC+TGG | + | Chr2:69725776-69725795 | MsG0280010444.01.T01:CDS | 35.0% | |
| ATGCTGATGACTTCTTTGAT+GGG | + | Chr2:69726016-69726035 | MsG0280010444.01.T01:CDS | 35.0% | |
| ATGGGAAGAATTGAATAGCA+TGG | + | Chr2:69725030-69725049 | MsG0280010444.01.T01:CDS | 35.0% | |
| GAATAACAAGTCTGTTGTGA+TGG | + | Chr2:69725063-69725082 | MsG0280010444.01.T01:CDS | 35.0% | |
| GTTTGCAAAAGGAAACAAGT+CGG | + | Chr2:69725492-69725511 | MsG0280010444.01.T01:CDS | 35.0% | |
| !! | ACAGACTTGTTATTCTCTTC+CGG | - | Chr2:69725058-69725077 | None:intergenic | 35.0% |
| !! | ATATGCTGCTTTCATGAAGA+AGG | + | Chr2:69725957-69725976 | MsG0280010444.01.T01:CDS | 35.0% |
| AAAGGAAACAAGTCGGTCTA+TGG | + | Chr2:69725499-69725518 | MsG0280010444.01.T01:CDS | 40.0% | |
| AAATATCAGTCGTATGTGCG+AGG | + | Chr2:69725118-69725137 | MsG0280010444.01.T01:CDS | 40.0% | |
| AAGCTGGTGCAAGAATTTGA+GGG | + | Chr2:69725556-69725575 | MsG0280010444.01.T01:CDS | 40.0% | |
| AAGGAAACAAGTCGGTCTAT+GGG | + | Chr2:69725500-69725519 | MsG0280010444.01.T01:CDS | 40.0% | |
| AATATCAGTCGTATGTGCGA+GGG | + | Chr2:69725119-69725138 | MsG0280010444.01.T01:CDS | 40.0% | |
| ACTTCTTTGATGGGATACTC+GGG | + | Chr2:69726025-69726044 | MsG0280010444.01.T01:CDS | 40.0% | |
| ATGAGAGGTTTGACAAGTCT+AGG | + | Chr2:69725899-69725918 | MsG0280010444.01.T01:CDS | 40.0% | |
| CTATTCAAACGCTCGTTTCA+CGG | + | Chr2:69725090-69725109 | MsG0280010444.01.T01:CDS | 40.0% | |
| GAAAGGGAAGCAAAAAGTTG+GGG | + | Chr2:69725223-69725242 | MsG0280010444.01.T01:CDS | 40.0% | |
| GACTTCTTTGATGGGATACT+CGG | + | Chr2:69726024-69726043 | MsG0280010444.01.T01:CDS | 40.0% | |
| GATGCTGATGACTTCTTTGA+TGG | + | Chr2:69726015-69726034 | MsG0280010444.01.T01:CDS | 40.0% | |
| GGAAAGGGAAGCAAAAAGTT+GGG | + | Chr2:69725222-69725241 | MsG0280010444.01.T01:CDS | 40.0% | |
| TGAGAGGTTTGACAAGTCTA+GGG | + | Chr2:69725900-69725919 | MsG0280010444.01.T01:CDS | 40.0% | |
| TGGAAAGGGAAGCAAAAAGT+TGG | + | Chr2:69725221-69725240 | MsG0280010444.01.T01:CDS | 40.0% | |
| TTGGCTATGTGAAAAGAAGC+TGG | + | Chr2:69725540-69725559 | MsG0280010444.01.T01:CDS | 40.0% | |
| ! | AATCAACAACTTGCTTGGGT+TGG | + | Chr2:69725168-69725187 | MsG0280010444.01.T01:CDS | 40.0% |
| ! | TCTAGAACCATAGGATGAAC+TGG | - | Chr2:69725754-69725773 | None:intergenic | 40.0% |
| ! | TGAGTTTTTGCCCATTCCAA+AGG | + | Chr2:69725327-69725346 | MsG0280010444.01.T01:CDS | 40.0% |
| AAAGTTGGGGTGATGATCGA+TGG | + | Chr2:69725236-69725255 | MsG0280010444.01.T01:CDS | 45.0% | |
| AAGTTGGGGTGATGATCGAT+GGG | + | Chr2:69725237-69725256 | MsG0280010444.01.T01:CDS | 45.0% | |
| AGAACCATAGGATGAACTGG+AGG | - | Chr2:69725751-69725770 | None:intergenic | 45.0% | |
| AGTTGCTTGCCCAAATGTGT+AGG | + | Chr2:69725263-69725282 | MsG0280010444.01.T01:CDS | 45.0% | |
| ATCACTGATGATTTCGAGGC+AGG | + | Chr2:69725982-69726001 | MsG0280010444.01.T01:CDS | 45.0% | |
| ATGAGACCTCTGATCTCATG+TGG | + | Chr2:69725803-69725822 | MsG0280010444.01.T01:CDS | 45.0% | |
| GAACCATAGGATGAACTGGA+GGG | - | Chr2:69725750-69725769 | None:intergenic | 45.0% | |
| GAAGCTGGTGCAAGAATTTG+AGG | + | Chr2:69725555-69725574 | MsG0280010444.01.T01:CDS | 45.0% | |
| GAGTATATGCGAAGGAGAAG+TGG | + | Chr2:69725649-69725668 | MsG0280010444.01.T01:CDS | 45.0% | |
| GGAGATCACTGATGATTTCG+AGG | + | Chr2:69725978-69725997 | MsG0280010444.01.T01:CDS | 45.0% | |
| GTCAAACCTCTCATAAGACC+CGG | - | Chr2:69725893-69725912 | None:intergenic | 45.0% | |
| GTTAACCCACATGAGATCAG+AGG | - | Chr2:69725812-69725831 | None:intergenic | 45.0% | |
| TGAAAGCAGCATATCGCTCT+TGG | - | Chr2:69725951-69725970 | None:intergenic | 45.0% | |
| TGACAAGTCTAGGGAGTCTA+TGG | + | Chr2:69725909-69725928 | MsG0280010444.01.T01:CDS | 45.0% | |
| TGAGACCTCTGATCTCATGT+GGG | + | Chr2:69725804-69725823 | MsG0280010444.01.T01:CDS | 45.0% | |
| TTACCCTCCAGTTCATCCTA+TGG | + | Chr2:69725744-69725763 | MsG0280010444.01.T01:CDS | 45.0% | |
| ! | GGCATGGGAGCATGATTAAT+TGG | + | Chr2:69725521-69725540 | MsG0280010444.01.T01:CDS | 45.0% |
| ! | GGTGGTGATGATGTGGATAT+GGG | + | Chr2:69726054-69726073 | MsG0280010444.01.T01:CDS | 45.0% |
| ! | TGATGATGTGGATATGGGAC+TGG | + | Chr2:69726059-69726078 | MsG0280010444.01.T01:CDS | 45.0% |
| ! | TGGTGGTGATGATGTGGATA+TGG | + | Chr2:69726053-69726072 | MsG0280010444.01.T01:CDS | 45.0% |
| !! | TCCATAGTCTTGTCCGTGAT+AGG | - | Chr2:69725607-69725626 | None:intergenic | 45.0% |
| AACAAGTCGGTCTATGGGCA+TGG | + | Chr2:69725505-69725524 | MsG0280010444.01.T01:CDS | 50.0% | |
| AAGGAGAAGTGGTGAACCTG+AGG | + | Chr2:69725660-69725679 | MsG0280010444.01.T01:CDS | 50.0% | |
| ACAAAAGATGCCCACGCCTT+TGG | - | Chr2:69725346-69725365 | None:intergenic | 50.0% | |
| ACAAGTCGGTCTATGGGCAT+GGG | + | Chr2:69725506-69725525 | MsG0280010444.01.T01:CDS | 50.0% | |
| ACAGTGAGCACTTGCTTGAG+AGG | - | Chr2:69725409-69725428 | None:intergenic | 50.0% | |
| ACCACAAATGGAGCATGGAG+AGG | + | Chr2:69725702-69725721 | MsG0280010444.01.T01:CDS | 50.0% | |
| ATGCATAGGAGGCCTATCAC+CGG | + | Chr2:69725871-69725890 | MsG0280010444.01.T01:CDS | 50.0% | |
| CCACAAATGGAGCATGGAGA+GGG | + | Chr2:69725703-69725722 | MsG0280010444.01.T01:CDS | 50.0% | |
| CTCTCATAAGACCCGGTGAT+AGG | - | Chr2:69725886-69725905 | None:intergenic | 50.0% | |
| GCCTATCACGGACAAGACTA+TGG | + | Chr2:69725603-69725622 | MsG0280010444.01.T01:CDS | 50.0% | |
| GGAGAGGGTAGTAGTCATCA+TGG | + | Chr2:69725718-69725737 | MsG0280010444.01.T01:CDS | 50.0% | |
| TCTCCATGCTCCATTTGTGG+TGG | - | Chr2:69725703-69725722 | None:intergenic | 50.0% | |
| TGATTTCGAGGCAGGAGAGA+AGG | + | Chr2:69725990-69726009 | MsG0280010444.01.T01:CDS | 50.0% | |
| TGCAGTTCGGAGGTTGGAAA+GGG | + | Chr2:69725207-69725226 | MsG0280010444.01.T01:CDS | 50.0% | |
| TTGCCCAAATGTGTAGGCCA+GGG | + | Chr2:69725269-69725288 | MsG0280010444.01.T01:CDS | 50.0% | |
| TTTGATGGGATACTCGGGAC+TGG | + | Chr2:69726030-69726049 | MsG0280010444.01.T01:CDS | 50.0% | |
| ! | AGTCTTGTCCGTGATAGGCT+TGG | - | Chr2:69725602-69725621 | None:intergenic | 50.0% |
| ! | CTATCACCGGGTCTTATGAG+AGG | + | Chr2:69725884-69725903 | MsG0280010444.01.T01:CDS | 50.0% |
| ! | CTCCTGAAGAGTGTGCAGTT+CGG | + | Chr2:69725194-69725213 | MsG0280010444.01.T01:CDS | 50.0% |
| ! | TTTGCCCATTCCAAAGGCGT+GGG | + | Chr2:69725333-69725352 | MsG0280010444.01.T01:CDS | 50.0% |
| ! | TTTTGCCCATTCCAAAGGCG+TGG | + | Chr2:69725332-69725351 | MsG0280010444.01.T01:CDS | 50.0% |
| AAGCCCCTGGCCTACACATT+TGG | - | Chr2:69725276-69725295 | None:intergenic | 55.0% | |
| AGAGTGTGCAGTTCGGAGGT+TGG | + | Chr2:69725201-69725220 | MsG0280010444.01.T01:CDS | 55.0% | |
| AGCCCCTGGCCTACACATTT+GGG | - | Chr2:69725275-69725294 | None:intergenic | 55.0% | |
| CAGCCACCACAAATGGAGCA+TGG | + | Chr2:69725697-69725716 | MsG0280010444.01.T01:CDS | 55.0% | |
| CCCTCTCCATGCTCCATTTG+TGG | - | Chr2:69725706-69725725 | None:intergenic | 55.0% | |
| CTCCGAACTGCACACTCTTC+AGG | - | Chr2:69725199-69725218 | None:intergenic | 55.0% | |
| CTTGCCCAAATGTGTAGGCC+AGG | + | Chr2:69725268-69725287 | MsG0280010444.01.T01:CDS | 55.0% | |
| CTTGTCCGTGATAGGCTTGG+TGG | - | Chr2:69725599-69725618 | None:intergenic | 55.0% | |
| GCAAACTCAGCGGAGAACCT+CGG | - | Chr2:69725838-69725857 | None:intergenic | 55.0% | |
| GTGCAGTTCGGAGGTTGGAA+AGG | + | Chr2:69725206-69725225 | MsG0280010444.01.T01:CDS | 55.0% | |
| TCAGTCGTATGTGCGAGGGA+AGG | + | Chr2:69725123-69725142 | MsG0280010444.01.T01:CDS | 55.0% | |
| TCCATTTGTGGTGGCTGCTG+CGG | - | Chr2:69725694-69725713 | None:intergenic | 55.0% | |
| TCCGACCACCAAGCCTATCA+CGG | + | Chr2:69725591-69725610 | MsG0280010444.01.T01:CDS | 55.0% | |
| TGCATAGGAGGCCTATCACC+GGG | + | Chr2:69725872-69725891 | MsG0280010444.01.T01:CDS | 55.0% | |
| TGCCCAAATGTGTAGGCCAG+GGG | + | Chr2:69725270-69725289 | MsG0280010444.01.T01:CDS | 55.0% | |
| TGCCTCTGCAGCAAACTCAG+CGG | - | Chr2:69725848-69725867 | None:intergenic | 55.0% | |
| ! | AGATGCCCACGCCTTTGGAA+TGG | - | Chr2:69725341-69725360 | None:intergenic | 55.0% |
| ! | CAGAGGCACAGATGCATAGG+AGG | + | Chr2:69725860-69725879 | MsG0280010444.01.T01:CDS | 55.0% |
| ! | CTGAAGAGTGTGCAGTTCGG+AGG | + | Chr2:69725197-69725216 | MsG0280010444.01.T01:CDS | 55.0% |
| ! | CTGCAGAGGCACAGATGCAT+AGG | + | Chr2:69725857-69725876 | MsG0280010444.01.T01:CDS | 55.0% |
| ! | TCATGTGGGTTAACCGTCCG+AGG | + | Chr2:69725818-69725837 | MsG0280010444.01.T01:CDS | 55.0% |
| !! | GACTGGTGGTGGTGATGATG+TGG | + | Chr2:69726047-69726066 | MsG0280010444.01.T01:CDS | 55.0% |
| !! | GATGCCCACGCCTTTGGAAT+GGG | - | Chr2:69725340-69725359 | None:intergenic | 55.0% |
| !! | TCCGTGATAGGCTTGGTGGT+CGG | - | Chr2:69725595-69725614 | None:intergenic | 55.0% |
| ACCGCAGCAGCCACCACAAA+TGG | + | Chr2:69725690-69725709 | MsG0280010444.01.T01:CDS | 60.0% | |
| ACTCAGCGGAGAACCTCGGA+CGG | - | Chr2:69725834-69725853 | None:intergenic | 60.0% | |
| ATTTGTGGTGGCTGCTGCGG+TGG | - | Chr2:69725691-69725710 | None:intergenic | 60.0% | |
| GATGGGATACTCGGGACTGG+TGG | + | Chr2:69726033-69726052 | MsG0280010444.01.T01:CDS | 60.0% | |
| GCCAGGGGCTTCATGGAAGA+GGG | + | Chr2:69725285-69725304 | MsG0280010444.01.T01:CDS | 60.0% | |
| GGGCTTCATGGAAGAGGGCT+AGG | + | Chr2:69725290-69725309 | MsG0280010444.01.T01:CDS | 60.0% | |
| TGTGTAGGCCAGGGGCTTCA+TGG | + | Chr2:69725278-69725297 | MsG0280010444.01.T01:CDS | 60.0% | |
| !! | CTCCGCTGAGTTTGCTGCAG+AGG | + | Chr2:69725843-69725862 | MsG0280010444.01.T01:CDS | 60.0% |
| GCCCTCTTCCATGAAGCCCC+TGG | - | Chr2:69725289-69725308 | None:intergenic | 65.0% | |
| GGCCAGGGGCTTCATGGAAG+AGG | + | Chr2:69725284-69725303 | MsG0280010444.01.T01:CDS | 65.0% | |
| ! | GGGATACTCGGGACTGGTGG+TGG | + | Chr2:69726036-69726055 | MsG0280010444.01.T01:CDS | 65.0% |
| TGTGGTGGCTGCTGCGGTGG+TGG | - | Chr2:69725688-69725707 | None:intergenic | 70.0% | |
| ! | TGCTGCGGTGGTGGTGCCTC+AGG | - | Chr2:69725679-69725698 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 69725013 | 69726089 | 69725013 | ID=MsG0280010444.01;Name=MsG0280010444.01 |
| Chr2 | mRNA | 69725013 | 69726089 | 69725013 | ID=MsG0280010444.01.T01;Parent=MsG0280010444.01;Name=MsG0280010444.01.T01;_AED=0.73;_eAED=1.00;_QI=0|-1|0|1|-1|1|1|0|358 |
| Chr2 | exon | 69725013 | 69726089 | 69725013 | ID=MsG0280010444.01.T01:exon:26770;Parent=MsG0280010444.01.T01 |
| Chr2 | CDS | 69725013 | 69726089 | 69725013 | ID=MsG0280010444.01.T01:cds;Parent=MsG0280010444.01.T01 |
| Gene Sequence |
| Protein sequence |
