AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010454.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010454.01.T01 MTR_2g084530 93.873 457 27 1 1 457 1 456 0.0 847
MsG0280010454.01.T01 MTR_4g056520 68.478 460 140 4 1 457 1 458 0.0 622
MsG0280010454.01.T01 MTR_1g050545 28.337 427 248 14 38 448 90 474 1.23e-33 132
MsG0280010454.01.T01 MTR_1g094155 25.503 447 275 13 29 456 86 493 1.20e-32 130
MsG0280010454.01.T01 MTR_4g057595 26.711 453 278 14 11 449 76 488 7.34e-32 127
MsG0280010454.01.T01 MTR_2g095730 27.123 424 248 14 44 448 107 488 1.04e-31 127
MsG0280010454.01.T01 MTR_4g057585 26.058 449 276 15 16 449 80 487 1.07e-31 127
MsG0280010454.01.T01 MTR_4g057600 25.240 416 262 10 44 448 108 485 2.21e-31 126
MsG0280010454.01.T01 MTR_4g057570 25.792 442 271 11 27 450 83 485 8.32e-31 124
MsG0280010454.01.T01 MTR_5g097180 27.506 429 251 15 36 448 44 428 9.88e-31 124
MsG0280010454.01.T01 MTR_2g095750 27.273 418 252 11 44 448 113 491 1.77e-30 124
MsG0280010454.01.T01 MTR_4g084710 24.764 424 269 11 36 448 46 430 1.85e-29 120
MsG0280010454.01.T01 MTR_2g012850 25.397 441 258 15 36 445 52 452 3.89e-26 110
MsG0280010454.01.T01 MTR_7g013790 26.457 446 250 15 36 447 52 453 9.32e-25 106
MsG0280010454.01.T01 MTR_2g012860 26.498 434 264 15 36 445 58 460 1.20e-24 106
MsG0280010454.01.T01 MTR_4g089155 25.339 442 259 16 36 445 70 472 2.94e-24 105
MsG0280010454.01.T01 MTR_4g075150 25.747 435 269 15 36 448 51 453 3.00e-24 105
MsG0280010454.01.T01 MTR_4g075150 26.244 442 256 17 36 448 51 451 3.53e-24 105
MsG0280010454.01.T01 MTR_3g498755 27.423 423 264 17 36 441 32 428 2.20e-23 102
MsG0280010454.01.T01 MTR_8g099930 26.887 424 264 14 36 441 50 445 1.38e-22 100
MsG0280010454.01.T01 MTR_4g122950 24.434 442 279 15 36 450 56 469 4.54e-22 99.0
MsG0280010454.01.T01 MTR_2g449850 26.108 406 251 14 55 441 70 445 5.52e-22 98.6
MsG0280010454.01.T01 MTR_2g095710 25.476 420 251 12 43 448 103 474 6.18e-22 98.6
MsG0280010454.01.T01 MTR_1g020090 25.942 451 272 17 17 450 84 489 6.19e-22 98.6
MsG0280010454.01.T01 MTR_3g079600 26.244 442 248 19 36 450 93 483 1.33e-21 97.8
MsG0280010454.01.T01 MTR_1g021010 25.926 432 257 15 36 450 93 478 2.09e-21 97.1
MsG0280010454.01.T01 MTR_3g434850 25.373 469 289 19 6 450 15 446 4.08e-21 95.9
MsG0280010454.01.T01 MTR_2g063000 23.025 443 270 12 36 450 56 455 7.27e-21 95.1
MsG0280010454.01.T01 MTR_1g021020 23.908 435 261 16 36 450 95 479 2.00e-20 94.0
MsG0280010454.01.T01 MTR_7g021130 26.969 419 268 14 36 441 47 440 3.10e-20 93.2
MsG0280010454.01.T01 MTR_3g034290 25.954 393 252 12 65 448 118 480 3.49e-20 93.6
MsG0280010454.01.T01 MTR_3g079620 32.948 173 103 5 36 199 95 263 5.90e-20 92.8
MsG0280010454.01.T01 MTR_2g062980 32.934 167 97 6 36 194 57 216 3.09e-19 90.5
MsG0280010454.01.T01 MTR_3g079560 31.792 173 105 5 36 199 95 263 3.89e-19 90.1
MsG0280010454.01.T01 MTR_0003s0560 24.051 395 255 11 65 448 117 477 1.28e-18 88.6
MsG0280010454.01.T01 MTR_2g081620 24.419 430 272 18 36 447 58 452 2.54e-18 87.4
MsG0280010454.01.T01 MTR_7g080180 22.664 503 316 20 1 446 1 487 3.16e-18 87.4
MsG0280010454.01.T01 MTR_1g040370 29.167 216 141 5 36 245 47 256 3.55e-18 86.7
MsG0280010454.01.T01 MTR_2g062990 34.437 151 88 5 36 178 57 204 3.87e-18 87.0
MsG0280010454.01.T01 MTR_3g079590 32.370 173 104 5 36 199 95 263 4.03e-18 87.0
MsG0280010454.01.T01 MTR_0003s0560 31.944 144 92 2 65 202 117 260 4.78e-18 85.5
MsG0280010454.01.T01 MTR_4g122960 24.490 441 278 18 36 450 56 467 5.32e-18 86.7
MsG0280010454.01.T01 MTR_3g079570 31.214 173 106 5 36 199 96 264 5.33e-18 86.7
MsG0280010454.01.T01 MTR_3g090150 23.341 437 282 16 38 453 54 458 4.48e-17 84.0
MsG0280010454.01.T01 MTR_3g079630 31.214 173 106 5 36 199 95 263 1.02e-16 82.8
MsG0280010454.01.T01 MTR_1g095540 24.074 432 271 19 31 441 44 439 1.62e-16 82.0
MsG0280010454.01.T01 MTR_8g011350 23.982 442 266 19 55 446 63 484 2.10e-16 81.6
MsG0280010454.01.T01 MTR_1g095560 31.579 152 93 5 31 173 44 193 5.97e-16 80.5
MsG0280010454.01.T01 MTR_1g095560 31.579 152 93 5 31 173 44 193 6.08e-16 80.1
MsG0280010454.01.T01 MTR_5g072570 34.615 130 78 2 55 177 61 190 1.11e-15 79.3
MsG0280010454.01.T01 MTR_3g090130 23.039 408 267 13 65 453 72 451 1.15e-15 79.3
MsG0280010454.01.T01 MTR_8g011350 28.986 207 123 7 55 247 63 259 1.24e-15 79.3
MsG0280010454.01.T01 MTR_3g034290 26.141 241 160 6 36 268 91 321 1.44e-15 79.0
MsG0280010454.01.T01 MTR_7g051430 24.312 436 262 19 59 446 69 484 5.91e-15 77.4
MsG0280010454.01.T01 MTR_7g080180 25.911 247 150 10 1 220 1 241 9.19e-15 76.6
MsG0280010454.01.T01 MTR_7g051430 33.824 136 76 4 59 183 69 201 1.20e-13 72.8
MsG0280010454.01.T01 MTR_3g114620 39.823 113 31 2 115 227 12 87 3.09e-13 65.5
MsG0280010454.01.T01 MTR_2g018600 23.026 456 264 19 34 447 49 459 8.47e-13 70.5
MsG0280010454.01.T01 MTR_2g018590 24.324 444 274 18 34 447 48 459 1.10e-12 70.1
MsG0280010454.01.T01 MTR_3g045770 23.542 480 287 21 6 448 9 445 3.78e-12 68.6
MsG0280010454.01.T01 MTR_4g021520 22.345 452 280 20 14 441 50 454 9.48e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010454.01.T01 AT2G27920 61.432 433 164 2 28 457 29 461 0.0 550
MsG0280010454.01.T01 AT2G27920 58.808 386 156 2 75 457 4 389 3.87e-160 458
MsG0280010454.01.T01 AT2G27920 57.061 347 146 2 114 457 48 394 8.45e-136 396
MsG0280010454.01.T01 AT3G45010 25.858 437 284 10 20 448 88 492 3.08e-36 140
MsG0280010454.01.T01 AT3G10410 27.857 420 245 13 44 448 112 488 5.46e-33 131
MsG0280010454.01.T01 AT5G22980 25.240 416 261 9 44 448 111 487 6.60e-32 127
MsG0280010454.01.T01 AT1G15000 26.279 430 250 14 36 448 38 417 7.34e-32 127
MsG0280010454.01.T01 AT4G15100 25.959 443 276 13 36 453 61 476 2.79e-25 108
MsG0280010454.01.T01 AT1G11080 25.503 447 269 14 36 450 67 481 1.22e-23 103
MsG0280010454.01.T01 AT1G11080 26.386 451 260 16 36 450 67 481 1.38e-23 103
MsG0280010454.01.T01 AT5G23210 25.513 439 280 16 36 448 68 485 3.27e-21 96.7
MsG0280010454.01.T01 AT3G07990 25.223 448 261 20 36 454 51 453 3.47e-21 96.3
MsG0280010454.01.T01 AT1G61130 26.608 451 251 17 36 451 48 453 3.97e-21 95.9
MsG0280010454.01.T01 AT3G52010 26.389 432 258 16 36 447 82 473 4.41e-21 96.3
MsG0280010454.01.T01 AT2G33530 27.107 439 273 16 31 450 44 454 1.37e-20 94.4
MsG0280010454.01.T01 AT2G05850 25.882 425 270 16 36 447 81 473 1.86e-20 94.4
MsG0280010454.01.T01 AT2G35780 24.178 426 265 14 36 441 47 434 2.62e-20 93.6
MsG0280010454.01.T01 AT2G35770 24.292 424 274 15 36 445 55 445 4.65e-20 92.8
MsG0280010454.01.T01 AT4G30610 25.629 437 262 16 36 445 49 449 5.63e-20 92.8
MsG0280010454.01.T01 AT3G63470 25.234 428 265 17 36 447 98 486 7.52e-20 92.4
MsG0280010454.01.T01 AT4G30810 24.942 429 268 17 46 455 67 460 1.45e-19 91.7
MsG0280010454.01.T01 AT3G52000 25.234 428 264 16 36 447 81 468 1.75e-19 91.3
MsG0280010454.01.T01 AT1G43780 24.074 432 282 14 36 447 54 459 3.18e-19 90.5
MsG0280010454.01.T01 AT2G24010 38.095 147 77 5 36 173 47 188 3.41e-19 90.1
MsG0280010454.01.T01 AT3G17180 25.676 444 263 19 36 447 56 464 1.39e-18 88.6
MsG0280010454.01.T01 AT1G28110 26.328 433 282 15 31 450 42 450 4.02e-18 87.0
MsG0280010454.01.T01 AT1G28110 26.328 433 282 15 31 450 42 450 4.02e-18 87.0
MsG0280010454.01.T01 AT5G42230 32.934 167 99 4 55 208 60 226 4.36e-18 87.0
MsG0280010454.01.T01 AT5G42230 32.934 167 99 4 55 208 60 226 4.36e-18 87.0
MsG0280010454.01.T01 AT5G08260 34.014 147 84 4 36 173 56 198 1.02e-17 85.9
MsG0280010454.01.T01 AT3G17180 33.562 146 86 5 36 173 56 198 1.05e-17 85.5
MsG0280010454.01.T01 AT4G12910 25.163 461 269 20 36 446 52 486 1.11e-17 85.9
MsG0280010454.01.T01 AT5G23210 34.694 147 81 7 36 172 68 209 1.43e-17 85.1
MsG0280010454.01.T01 AT5G42240 32.447 188 106 6 36 208 49 230 1.51e-17 85.1
MsG0280010454.01.T01 AT2G12480 36.508 126 73 2 55 173 63 188 1.65e-16 82.0
MsG0280010454.01.T01 AT2G12480 36.508 126 73 2 55 173 63 188 1.66e-16 82.0
MsG0280010454.01.T01 AT2G12480 36.508 126 73 2 55 173 63 188 1.73e-16 82.0
MsG0280010454.01.T01 AT2G12480 36.508 126 73 2 55 173 63 188 1.94e-16 82.0
MsG0280010454.01.T01 AT2G24000 35.374 147 82 6 36 173 47 189 2.30e-16 81.6
MsG0280010454.01.T01 AT3G52020 25.747 435 257 19 36 447 96 487 3.23e-16 81.3
MsG0280010454.01.T01 AT4G12910 26.316 247 159 8 36 270 52 287 5.14e-16 80.5
MsG0280010454.01.T01 AT3G25420 32.051 156 91 4 36 181 47 197 7.22e-16 80.1
MsG0280010454.01.T01 AT3G02110 30.588 170 106 4 36 197 54 219 1.91e-15 79.0
MsG0280010454.01.T01 AT2G24010 33.951 162 78 6 36 173 18 174 2.30e-15 77.8
MsG0280010454.01.T01 AT2G24010 33.951 162 78 6 36 173 47 203 5.84e-15 77.4
MsG0280010454.01.T01 AT2G24010 33.951 162 78 6 36 173 18 174 6.36e-15 77.0
MsG0280010454.01.T01 AT5G22960 30.070 143 78 4 33 173 34 156 2.23e-14 72.0
MsG0280010454.01.T01 AT2G22980 23.430 414 258 16 34 434 41 408 1.26e-12 69.7
MsG0280010454.01.T01 AT1G73290 26.180 233 136 10 34 248 47 261 1.80e-12 68.6
MsG0280010454.01.T01 AT3G56540 30.935 139 87 4 36 168 96 231 2.25e-12 67.4
MsG0280010454.01.T01 AT1G73290 26.180 233 136 10 34 248 47 261 3.15e-12 68.6
MsG0280010454.01.T01 AT1G73290 26.180 233 136 10 34 248 47 261 3.59e-12 68.6
MsG0280010454.01.T01 AT1G73280 26.033 242 139 10 6 220 14 242 4.39e-12 67.8
MsG0280010454.01.T01 AT1G73280 22.270 467 268 21 6 436 14 421 5.21e-12 68.2
MsG0280010454.01.T01 AT5G36180 26.638 229 134 8 34 245 48 259 1.33e-11 66.6
MsG0280010454.01.T01 AT1G73300 26.724 232 130 10 34 245 48 259 2.28e-11 65.9
MsG0280010454.01.T01 AT1G73300 26.724 232 130 10 34 245 48 259 2.28e-11 65.9
MsG0280010454.01.T01 AT2G22980 23.134 402 251 15 34 423 41 396 3.51e-11 65.5
MsG0280010454.01.T01 AT2G22970 27.451 204 121 7 34 220 40 233 4.28e-11 64.3
MsG0280010454.01.T01 AT2G22980 23.450 371 233 13 34 392 41 372 5.00e-11 65.1
MsG0280010454.01.T01 AT2G22970 27.451 204 121 7 34 220 40 233 5.14e-11 65.1
MsG0280010454.01.T01 AT2G22970 27.451 204 121 7 34 220 40 233 6.05e-11 64.7
MsG0280010454.01.T01 AT3G12220 29.801 151 89 4 34 172 42 187 7.93e-11 63.9
MsG0280010454.01.T01 AT2G22970 27.451 204 121 7 34 220 40 233 8.22e-11 64.3
MsG0280010454.01.T01 AT3G12220 29.801 151 89 4 34 172 42 187 8.65e-11 64.3

Find 92 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTCACTTCCACAATATA+TGG 0.170192 2:-69891966 None:intergenic
CTTTGTGACACCATTTAATA+AGG 0.235411 2:-69891274 None:intergenic
GTTCTTACCACATAGTCTTC+TGG 0.243568 2:-69890665 None:intergenic
GAAATTCCTTGGCTCCAAAT+TGG 0.257213 2:-69889584 None:intergenic
ACAAACTTACGTAATATTCT+TGG 0.277759 2:-69891316 None:intergenic
TTTCTCACCTCAGCAATTCT+TGG 0.278398 2:-69891478 None:intergenic
GATCTAGACACCTTATTAAA+TGG 0.279796 2:+69891264 MsG0280010454.01.T01:CDS
CTAAACTTCTATTGGTTACT+TGG 0.283816 2:+69892022 MsG0280010454.01.T01:CDS
TGGCCCTCTTGATTCCAATT+TGG 0.304252 2:+69889570 MsG0280010454.01.T01:CDS
TGAATTGAACAGGGTGGTTC+AGG 0.305284 2:+69889520 MsG0280010454.01.T01:intron
ATGAAAACCTAAACTTCTAT+TGG 0.313670 2:+69892014 MsG0280010454.01.T01:CDS
CAAGTAACCAATAGAAGTTT+AGG 0.319105 2:-69892021 None:intergenic
GCCAATCATTCTCTGGTTGC+AGG 0.324301 2:+69889370 MsG0280010454.01.T01:CDS
TTTGTCACTCTTGTATTCCT+TGG 0.347875 2:+69888560 MsG0280010454.01.T01:CDS
GGAAAATTTGCTGCTACTCT+TGG 0.354637 2:+69890077 MsG0280010454.01.T01:CDS
CTCAACCAAGTGAAATTCCT+TGG 0.361943 2:-69889595 None:intergenic
TGAAGATGGATTAGAAGAAT+GGG 0.371841 2:+69888622 MsG0280010454.01.T01:CDS
TTCTTACCACATAGTCTTCT+GGG 0.375634 2:-69890664 None:intergenic
GTGAAGATGGATTAGAAGAA+TGG 0.379824 2:+69888621 MsG0280010454.01.T01:CDS
AAAAGCAGATTTGCTATTTG+TGG 0.380443 2:+69889618 MsG0280010454.01.T01:CDS
TCACAGAAGCACACATGTTC+TGG 0.387689 2:+69889300 MsG0280010454.01.T01:intron
GTTGATGAGTTGCTAGCTCT+TGG 0.389681 2:+69891620 MsG0280010454.01.T01:CDS
CTTTCACTTCCACAATATAT+GGG 0.390366 2:-69891965 None:intergenic
CTTGACATGTCTTTCAAAAG+AGG 0.392714 2:-69890777 None:intergenic
TAGAAATAACAGCAACTTTG+TGG 0.395994 2:+69890994 MsG0280010454.01.T01:CDS
GAGAATGATTGGCCATGGTT+TGG 0.403314 2:-69889360 None:intergenic
CACCATGTTTAGTGCTATGC+AGG 0.403555 2:-69892170 None:intergenic
TTCTATTGGTTACTTGGTGC+TGG 0.410366 2:+69892028 MsG0280010454.01.T01:CDS
CAAACTTACGTAATATTCTT+GGG 0.412359 2:-69891315 None:intergenic
CCCTGCAACCAGAGAATGAT+TGG 0.421423 2:-69889371 None:intergenic
ATATGATTTAAAGAAGCCTT+TGG 0.421714 2:-69891993 None:intergenic
GAGGGATCCTCCACTCTGTA+GGG 0.430638 2:-69889338 None:intergenic
GAGCCAAGATTCAGTTCCCT+TGG 0.431242 2:-69891787 None:intergenic
AAACTGAACCCTGTACCAAC+TGG 0.435888 2:-69889918 None:intergenic
TTTCAATGAAGTAAGATACT+TGG 0.436573 2:-69891220 None:intergenic
GCTATGCAGGGCTGATCAAT+AGG 0.442197 2:-69892157 None:intergenic
CAACCAAGGGAACTGAATCT+TGG 0.446046 2:+69891784 MsG0280010454.01.T01:CDS
TTGAGAACAGTTTGGCAGAA+AGG 0.457698 2:+69890900 MsG0280010454.01.T01:intron
ATTTGACATTGCAGTTCTCA+TGG 0.458928 2:+69890751 MsG0280010454.01.T01:intron
TAGGACAATCCAGTTGGTAC+AGG 0.460572 2:+69889909 MsG0280010454.01.T01:intron
GAACAGGGTGGTTCAGGAGT+TGG 0.464636 2:+69889526 MsG0280010454.01.T01:intron
GGAGGGATCCTCCACTCTGT+AGG 0.468420 2:-69889339 None:intergenic
GGTGGTTCAGGAGTTGGATT+CGG 0.470677 2:+69889532 MsG0280010454.01.T01:CDS
AACCATGGCCAATCATTCTC+TGG 0.471827 2:+69889363 MsG0280010454.01.T01:CDS
TTGTTAATGCAACTTCTACA+TGG 0.473397 2:+69890951 MsG0280010454.01.T01:CDS
AATGATTGGCCATGGTTTGG+AGG 0.489481 2:-69889357 None:intergenic
TGTTACTTGTGTAGATGGCC+AGG 0.495826 2:+69891911 MsG0280010454.01.T01:intron
TTGATTCCAATTTGGAGCCA+AGG 0.502673 2:+69889578 MsG0280010454.01.T01:CDS
GGTGCTTTGAAGAGTGAAGA+TGG 0.519458 2:+69888608 MsG0280010454.01.T01:CDS
GTGTGGTATTAGCAGACAGC+TGG 0.524572 2:+69890636 MsG0280010454.01.T01:CDS
TTTGACATTGCAGTTCTCAT+GGG 0.549489 2:+69890752 MsG0280010454.01.T01:intron
GACAGAACTCCCATATATTG+TGG 0.552092 2:+69891956 MsG0280010454.01.T01:CDS
CAATACTATCTTCAAACCGC+TGG 0.553205 2:-69892211 None:intergenic
TGATCTCATTTGTGCAACCA+AGG 0.557323 2:+69891770 MsG0280010454.01.T01:CDS
ATGATTGGCCATGGTTTGGA+GGG 0.557889 2:-69889356 None:intergenic
GGAAGACTGAAGACTACACT+TGG 0.560174 2:+69890128 MsG0280010454.01.T01:CDS
AACCAGAGAATGATTGGCCA+TGG 0.561866 2:-69889365 None:intergenic
CCAATCATTCTCTGGTTGCA+GGG 0.566202 2:+69889371 MsG0280010454.01.T01:CDS
TGGAGCCAAGGAATTTCACT+TGG 0.566368 2:+69889590 MsG0280010454.01.T01:CDS
ATCAAGCAACAACTTGAAGA+TGG 0.567563 2:+69890923 MsG0280010454.01.T01:CDS
ATAATATAGGACAATCCAGT+TGG 0.573531 2:+69889903 MsG0280010454.01.T01:intron
CTTCATAAAATAGGAAACCA+AGG 0.581708 2:-69888577 None:intergenic
TCTCTTCTCAAGTGTTGATG+AGG 0.587198 2:-69891166 None:intergenic
GATCTCATTTGTGCAACCAA+GGG 0.589058 2:+69891771 MsG0280010454.01.T01:CDS
TGCATAGCACTAAACATGGT+GGG 0.591238 2:+69892172 MsG0280010454.01.T01:CDS
GAAGATGGATTAGAAGAATG+GGG 0.592964 2:+69888623 MsG0280010454.01.T01:CDS
TGCAATTACACAGTCACCAG+CGG 0.598764 2:+69892195 MsG0280010454.01.T01:CDS
GGCTCCAAATTGGAATCAAG+AGG 0.603391 2:-69889574 None:intergenic
TTGACATTGCAGTTCTCATG+GGG 0.607924 2:+69890753 MsG0280010454.01.T01:intron
TATGAAACCAAGAATTGCTG+AGG 0.611925 2:+69891471 MsG0280010454.01.T01:CDS
ACTTGTCAAAACTGATGAGG+AGG 0.613052 2:+69889959 MsG0280010454.01.T01:CDS
ATTACTTGTCAAAACTGATG+AGG 0.618007 2:+69889956 MsG0280010454.01.T01:CDS
AGGGATCCTCCACTCTGTAG+GGG 0.624983 2:-69889337 None:intergenic
CAGAAGCACACATGTTCTGG+TGG 0.633017 2:+69889303 MsG0280010454.01.T01:intron
AGACTGAAGACTACACTTGG+AGG 0.634439 2:+69890131 MsG0280010454.01.T01:CDS
AGGACAATCCAGTTGGTACA+GGG 0.637361 2:+69889910 MsG0280010454.01.T01:intron
GATCTCCCCAGAAGACTATG+TGG 0.641298 2:+69890658 MsG0280010454.01.T01:CDS
TGGAGGATCCCTCCAAACCA+TGG 0.645608 2:+69889348 MsG0280010454.01.T01:CDS
CTGCATAGCACTAAACATGG+TGG 0.646012 2:+69892171 MsG0280010454.01.T01:CDS
TAATAGTGTAGTCAAGTCAG+TGG 0.648733 2:-69889985 None:intergenic
ACCATGTTTAGTGCTATGCA+GGG 0.650772 2:-69892169 None:intergenic
GCCCTGCATAGCACTAAACA+TGG 0.652704 2:+69892168 MsG0280010454.01.T01:CDS
GTCAATGTAACTGTGTACAA+TGG 0.655505 2:+69891644 MsG0280010454.01.T01:CDS
ATGTCAAGAATTGATGACAA+TGG 0.657978 2:+69890792 MsG0280010454.01.T01:CDS
TCTTACCACATAGTCTTCTG+GGG 0.665579 2:-69890663 None:intergenic
GCTCCAAATTGGAATCAAGA+GGG 0.672363 2:-69889573 None:intergenic
CAGAAGCCCCTACAGAGTGG+AGG 0.673135 2:+69889331 MsG0280010454.01.T01:CDS
TTACAGAAGCCCCTACAGAG+TGG 0.681726 2:+69889328 MsG0280010454.01.T01:CDS
ATCATTCTCTGGTTGCAGGG+AGG 0.688272 2:+69889374 MsG0280010454.01.T01:CDS
GGAAGTGAAAGAAAGACCAA+AGG 0.692192 2:+69891977 MsG0280010454.01.T01:CDS
TATTCAAAGAAATATCAATG+AGG 0.703117 2:+69891190 MsG0280010454.01.T01:CDS
AATTGCTGACAGATGGTATG+CGG 0.759275 2:+69891411 MsG0280010454.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAACACAATTTAAAATAAA+TGG - Chr2:69889058-69889077 None:intergenic 10.0%
!!! TTTGTTGTTAATTATAATAT+AGG + Chr2:69889890-69889909 MsG0280010454.01.T01:intron 10.0%
!! AGAAATTAATTATTCATTAG+TGG - Chr2:69891076-69891095 None:intergenic 15.0%
!! ATAACACAATTCAAAATAAA+TGG - Chr2:69889281-69889300 None:intergenic 15.0%
!! TAAACATATATTTATCTAGT+TGG + Chr2:69890241-69890260 MsG0280010454.01.T01:intron 15.0%
!! TTAATTCAAATAATACTTAC+AGG - Chr2:69889401-69889420 None:intergenic 15.0%
!! TTACACAATTCTAATATATT+TGG - Chr2:69888674-69888693 None:intergenic 15.0%
!! TTTATAGATGAAAAATTTCA+AGG - Chr2:69890168-69890187 None:intergenic 15.0%
!!! AAATGTAATTTGTTCATTTT+TGG + Chr2:69890041-69890060 MsG0280010454.01.T01:CDS 15.0%
!!! AAATTTTTCATCTATAAATG+TGG + Chr2:69890170-69890189 MsG0280010454.01.T01:intron 15.0%
!!! AATGTAATTTGTTCATTTTT+GGG + Chr2:69890042-69890061 MsG0280010454.01.T01:CDS 15.0%
!!! CTATTGTTTAAGTTAATTAT+CGG - Chr2:69889249-69889268 None:intergenic 15.0%
!!! GTAATCAATTTCTAAAATTA+TGG + Chr2:69889005-69889024 MsG0280010454.01.T01:intron 15.0%
!!! TAAGGATTTCTATAATTTTA+TGG + Chr2:69891116-69891135 MsG0280010454.01.T01:intron 15.0%
!!! TATGTGATTGAAATTTTTTT+AGG + Chr2:69891442-69891461 MsG0280010454.01.T01:CDS 15.0%
!! AAAAATTCTAATGCTGTTAA+TGG + Chr2:69891240-69891259 MsG0280010454.01.T01:CDS 20.0%
!! AAACGATCAATTTAAAAGTT+TGG - Chr2:69888715-69888734 None:intergenic 20.0%
!! AAATACAAAGAATTCAAACT+AGG - Chr2:69889119-69889138 None:intergenic 20.0%
!! AATACAAAGAATTCAAACTA+GGG - Chr2:69889118-69889137 None:intergenic 20.0%
!! AATGATTAATACTAGAAGAT+GGG - Chr2:69890858-69890877 None:intergenic 20.0%
!! AGTATTAATCATTGTATTGT+AGG + Chr2:69890865-69890884 MsG0280010454.01.T01:intron 20.0%
!! GAAAAAACTAAACTGAAAAT+TGG + Chr2:69890516-69890535 MsG0280010454.01.T01:intron 20.0%
!! GGTGAATTTAGAAAAATTTA+TGG - Chr2:69889738-69889757 None:intergenic 20.0%
!! TACTAATAGAAAAGAACAAT+CGG - Chr2:69891715-69891734 None:intergenic 20.0%
!! TATTCAAAGAAATATCAATG+AGG + Chr2:69891190-69891209 MsG0280010454.01.T01:CDS 20.0%
!! TTAACTAATTAGAACAAGTT+TGG + Chr2:69891505-69891524 MsG0280010454.01.T01:intron 20.0%
!! TTACCAAGTATAATTTACTT+GGG + Chr2:69892119-69892138 MsG0280010454.01.T01:intron 20.0%
!!! AAATTACATTTTTGTAGACT+TGG - Chr2:69890032-69890051 None:intergenic 20.0%
!!! AACTAGTGTTTTTTTTTTTG+TGG - Chr2:69888838-69888857 None:intergenic 20.0%
!!! ACATAGTATATTTAAGATCT+GGG + Chr2:69888797-69888816 MsG0280010454.01.T01:intron 20.0%
!!! ACTTTGATTATTTTCTTTGA+GGG + Chr2:69889827-69889846 MsG0280010454.01.T01:intron 20.0%
!!! ATGTAATTTGTTCATTTTTG+GGG + Chr2:69890043-69890062 MsG0280010454.01.T01:CDS 20.0%
!!! TACTTTGATTATTTTCTTTG+AGG + Chr2:69889826-69889845 MsG0280010454.01.T01:intron 20.0%
!!! TATATGCTTCTTTTTCAATA+TGG + Chr2:69892090-69892109 MsG0280010454.01.T01:intron 20.0%
!!! TGCTATTTTTATCCAAATTT+AGG + Chr2:69890614-69890633 MsG0280010454.01.T01:intron 20.0%
!!! TTCAAATTAAAGTGTGTTTT+AGG + Chr2:69888938-69888957 MsG0280010454.01.T01:intron 20.0%
!!! TTCCAAACTTTTAAATTGAT+CGG + Chr2:69888710-69888729 MsG0280010454.01.T01:intron 20.0%
!!! TTTAGGTTTCAATATATGTT+GGG + Chr2:69888967-69888986 MsG0280010454.01.T01:intron 20.0%
!!! TTTGAATTAAAGTGTGTTTT+AGG + Chr2:69889188-69889207 MsG0280010454.01.T01:intron 20.0%
!!! TTTTTAAAAAACTCAGTATC+CGG + Chr2:69891681-69891700 MsG0280010454.01.T01:intron 20.0%
! AATTAATGTTGTGAACATCT+TGG - Chr2:69890706-69890725 None:intergenic 25.0%
! ACAAACTTACGTAATATTCT+TGG - Chr2:69891319-69891338 None:intergenic 25.0%
! AGTTTGGAAAATATTCATCA+CGG + Chr2:69891521-69891540 MsG0280010454.01.T01:intron 25.0%
! ATATGATTTAAAGAAGCCTT+TGG - Chr2:69891996-69892015 None:intergenic 25.0%
! ATATTTAGTGTTTGAGAAGA+TGG - Chr2:69892073-69892092 None:intergenic 25.0%
! ATGAAAACCTAAACTTCTAT+TGG + Chr2:69892014-69892033 MsG0280010454.01.T01:CDS 25.0%
! ATGGATTTAGACTTACAAAA+TGG - Chr2:69892054-69892073 None:intergenic 25.0%
! ATTAATGTTGTGAACATCTT+GGG - Chr2:69890705-69890724 None:intergenic 25.0%
! CAAACTTACGTAATATTCTT+GGG - Chr2:69891318-69891337 None:intergenic 25.0%
! CAATGATTAATACTAGAAGA+TGG - Chr2:69890859-69890878 None:intergenic 25.0%
! CTTGTTCAAAATTCAAATCA+TGG - Chr2:69889425-69889444 None:intergenic 25.0%
! GTGTTAAGAATAGTACTATA+TGG + Chr2:69890576-69890595 MsG0280010454.01.T01:intron 25.0%
! GTTACCAAGTATAATTTACT+TGG + Chr2:69892118-69892137 MsG0280010454.01.T01:intron 25.0%
! TCAAATCATTGAATTGAACA+GGG + Chr2:69889511-69889530 MsG0280010454.01.T01:intron 25.0%
! TTCAAATCATTGAATTGAAC+AGG + Chr2:69889510-69889529 MsG0280010454.01.T01:intron 25.0%
! TTCACAAACACATAAAAACA+TGG - Chr2:69889483-69889502 None:intergenic 25.0%
! TTTCAATGAAGTAAGATACT+TGG - Chr2:69891223-69891242 None:intergenic 25.0%
!! CAACTTTTCCTTCATAAAAT+AGG - Chr2:69888589-69888608 None:intergenic 25.0%
!! CTATTTTATGAAGGAAAAGT+TGG + Chr2:69888587-69888606 MsG0280010454.01.T01:CDS 25.0%
!! CTTTACTCAAGAAATTTTCA+AGG - Chr2:69891937-69891956 None:intergenic 25.0%
!! CTTTAGGTTTCAATATATGT+TGG + Chr2:69888966-69888985 MsG0280010454.01.T01:intron 25.0%
!! GACATAGTATATTTAAGATC+TGG + Chr2:69888796-69888815 MsG0280010454.01.T01:intron 25.0%
!! GGATTTCTATAATTTTATGG+AGG + Chr2:69891119-69891138 MsG0280010454.01.T01:intron 25.0%
!! TCCAAACTTTTAAATTGATC+GGG + Chr2:69888711-69888730 MsG0280010454.01.T01:intron 25.0%
!! TCTAATATATTTGGCTTACT+AGG - Chr2:69888665-69888684 None:intergenic 25.0%
!! TTCGGAAATTTTATAGAGTT+TGG + Chr2:69889550-69889569 MsG0280010454.01.T01:CDS 25.0%
!! TTTTTATCCAAATTTAGGTG+TGG + Chr2:69890619-69890638 MsG0280010454.01.T01:intron 25.0%
!!! TAGTGTTTTTTTTTTTGTGG+TGG - Chr2:69888835-69888854 None:intergenic 25.0%
!!! TCCTTTTTTAATTGCTTTGA+GGG - Chr2:69890111-69890130 None:intergenic 25.0%
!!! TGCTTTGATTTTCTAAACTT+AGG + Chr2:69891560-69891579 MsG0280010454.01.T01:intron 25.0%
!!! TTCCTTTTTTAATTGCTTTG+AGG - Chr2:69890112-69890131 None:intergenic 25.0%
ACCCGATCAATTTAAAAGTT+TGG - Chr2:69889081-69889100 None:intergenic 30.0%
AGAAAAGAACAATCGGTATT+TGG - Chr2:69891708-69891727 None:intergenic 30.0%
ATAATATAGGACAATCCAGT+TGG + Chr2:69889903-69889922 MsG0280010454.01.T01:intron 30.0%
ATCTCATGTTTGTGTGTTTA+AGG + Chr2:69891098-69891117 MsG0280010454.01.T01:intron 30.0%
ATTACTTGTCAAAACTGATG+AGG + Chr2:69889956-69889975 MsG0280010454.01.T01:CDS 30.0%
ATTGCAAGAAACATGAGATT+AGG - Chr2:69891394-69891413 None:intergenic 30.0%
CAAGTAACCAATAGAAGTTT+AGG - Chr2:69892024-69892043 None:intergenic 30.0%
CTTCATAAAATAGGAAACCA+AGG - Chr2:69888580-69888599 None:intergenic 30.0%
CTTTCACTTCCACAATATAT+GGG - Chr2:69891968-69891987 None:intergenic 30.0%
CTTTGTGACACCATTTAATA+AGG - Chr2:69891277-69891296 None:intergenic 30.0%
GAAAAGAACAATCGGTATTT+GGG - Chr2:69891707-69891726 None:intergenic 30.0%
GATCTAGACACCTTATTAAA+TGG + Chr2:69891264-69891283 MsG0280010454.01.T01:CDS 30.0%
GTATAATTTACTTGGGTCAT+TGG + Chr2:69892126-69892145 MsG0280010454.01.T01:intron 30.0%
TAGAAATAACAGCAACTTTG+TGG + Chr2:69890994-69891013 MsG0280010454.01.T01:CDS 30.0%
TCTTTCACTTCCACAATATA+TGG - Chr2:69891969-69891988 None:intergenic 30.0%
TGACCCAAGTAAATTATACT+TGG - Chr2:69892125-69892144 None:intergenic 30.0%
TTAATGTTGTGAACATCTTG+GGG - Chr2:69890704-69890723 None:intergenic 30.0%
TTACAATGACACCGTAATTA+CGG + Chr2:69889705-69889724 MsG0280010454.01.T01:intron 30.0%
TTGATGCATGTTTGAATTGA+CGG - Chr2:69889759-69889778 None:intergenic 30.0%
TTGCAAGAAACATGAGATTA+GGG - Chr2:69891393-69891412 None:intergenic 30.0%
TTGCTGAATTTCACAAGTTA+AGG + Chr2:69889662-69889681 MsG0280010454.01.T01:intron 30.0%
TTGTTAATGCAACTTCTACA+TGG + Chr2:69890951-69890970 MsG0280010454.01.T01:CDS 30.0%
TTTAGGTCTCAATATGTGTT+AGG + Chr2:69889205-69889224 MsG0280010454.01.T01:intron 30.0%
! AATTTTATGGAGGACAACAA+TGG + Chr2:69891129-69891148 MsG0280010454.01.T01:CDS 30.0%
! ATGTCAAGAATTGATGACAA+TGG + Chr2:69890792-69890811 MsG0280010454.01.T01:CDS 30.0%
! CTAAACTTCTATTGGTTACT+TGG + Chr2:69892022-69892041 MsG0280010454.01.T01:CDS 30.0%
! CTTGGTTTCCTATTTTATGA+AGG + Chr2:69888578-69888597 MsG0280010454.01.T01:CDS 30.0%
! GAAATGGTTTGAAATGCATA+CGG + Chr2:69890319-69890338 MsG0280010454.01.T01:intron 30.0%
! GAAATGGTTTGAAATGCATA+TGG + Chr2:69890319-69890338 MsG0280010454.01.T01:intron 30.0%
! GTATATTTAAGATCTGGGTT+TGG + Chr2:69888802-69888821 MsG0280010454.01.T01:intron 30.0%
! TGAGTTTAGCTTAGTTGATA+AGG + Chr2:69888769-69888788 MsG0280010454.01.T01:intron 30.0%
!! AAAAGCAGATTTGCTATTTG+TGG + Chr2:69889618-69889637 MsG0280010454.01.T01:CDS 30.0%
!! ACATGATTTTGAGAACAGTT+TGG + Chr2:69890892-69890911 MsG0280010454.01.T01:intron 30.0%
!! GAGATTAGGGTTTTAATCAT+TGG - Chr2:69891380-69891399 None:intergenic 30.0%
!! GATTATTTTCTTTGAGGGTA+AGG + Chr2:69889832-69889851 MsG0280010454.01.T01:intron 30.0%
!! GTTTCTAGTTTGATTCTATC+AGG + Chr2:69891598-69891617 MsG0280010454.01.T01:intron 30.0%
!! TGAAGATGGATTAGAAGAAT+GGG + Chr2:69888622-69888641 MsG0280010454.01.T01:CDS 30.0%
!!! TTTTGTGTTACTTGTGTAGA+TGG + Chr2:69891906-69891925 MsG0280010454.01.T01:intron 30.0%
!!! TTTTTTTTTTTGTGGTGGCT+GGG - Chr2:69888830-69888849 None:intergenic 30.0%
AATCATTGAATTGAACAGGG+TGG + Chr2:69889514-69889533 MsG0280010454.01.T01:intron 35.0%
ATCAAGCAACAACTTGAAGA+TGG + Chr2:69890923-69890942 MsG0280010454.01.T01:CDS 35.0%
ATCGGTAACACCTTAATGAT+CGG - Chr2:69889231-69889250 None:intergenic 35.0%
ATTTGACATTGCAGTTCTCA+TGG + Chr2:69890751-69890770 MsG0280010454.01.T01:intron 35.0%
CTTGACATGTCTTTCAAAAG+AGG - Chr2:69890780-69890799 None:intergenic 35.0%
GCCCTCAAAGCAATTAAAAA+AGG + Chr2:69890107-69890126 MsG0280010454.01.T01:CDS 35.0%
GCTAATACCACACCTAAATT+TGG - Chr2:69890629-69890648 None:intergenic 35.0%
GGGGTGAATAAATAAATGAG+AGG - Chr2:69891832-69891851 None:intergenic 35.0%
GTCAATGTAACTGTGTACAA+TGG + Chr2:69891644-69891663 MsG0280010454.01.T01:CDS 35.0%
TAATAGTGTAGTCAAGTCAG+TGG - Chr2:69889988-69890007 None:intergenic 35.0%
TATGAAACCAAGAATTGCTG+AGG + Chr2:69891471-69891490 MsG0280010454.01.T01:CDS 35.0%
TTCTTACCACATAGTCTTCT+GGG - Chr2:69890667-69890686 None:intergenic 35.0%
TTGATTACCAACACGATGAT+TGG - Chr2:69888993-69889012 None:intergenic 35.0%
TTGCTTTCACCAAACTTGAA+GGG - Chr2:69891852-69891871 None:intergenic 35.0%
TTTGACATTGCAGTTCTCAT+GGG + Chr2:69890752-69890771 MsG0280010454.01.T01:intron 35.0%
TTTGCTTTCACCAAACTTGA+AGG - Chr2:69891853-69891872 None:intergenic 35.0%
TTTGTCACTCTTGTATTCCT+TGG + Chr2:69888560-69888579 MsG0280010454.01.T01:CDS 35.0%
! AAACCATTTCGCCTTTTATC+AGG - Chr2:69890309-69890328 None:intergenic 35.0%
! TTTATTCACCCCTTCAAGTT+TGG + Chr2:69891840-69891859 MsG0280010454.01.T01:intron 35.0%
! TTTTATCAGGACTTGTGCTT+GGG - Chr2:69890296-69890315 None:intergenic 35.0%
!! GAAGATGGATTAGAAGAATG+GGG + Chr2:69888623-69888642 MsG0280010454.01.T01:CDS 35.0%
!! GTGAAGATGGATTAGAAGAA+TGG + Chr2:69888621-69888640 MsG0280010454.01.T01:CDS 35.0%
!! TGTGTTTTAGGTCACACTTT+AGG + Chr2:69888950-69888969 MsG0280010454.01.T01:intron 35.0%
!! TTCATTTTTGGGGAGTCTTA+TGG + Chr2:69890053-69890072 MsG0280010454.01.T01:CDS 35.0%
!!! GTTTTTTTTTTTGTGGTGGC+TGG - Chr2:69888831-69888850 None:intergenic 35.0%
!!! TTTTTTTTTTGTGGTGGCTG+GGG - Chr2:69888829-69888848 None:intergenic 35.0%
AATTGCTGACAGATGGTATG+CGG + Chr2:69891411-69891430 MsG0280010454.01.T01:intron 40.0%
ACCATGTTTAGTGCTATGCA+GGG - Chr2:69892172-69892191 None:intergenic 40.0%
ACTTGTCAAAACTGATGAGG+AGG + Chr2:69889959-69889978 MsG0280010454.01.T01:CDS 40.0%
AGTCATAGGAAAGAGCGAAA+TGG + Chr2:69890365-69890384 MsG0280010454.01.T01:intron 40.0%
AGTCCTGATAAAAGGCGAAA+TGG + Chr2:69890303-69890322 MsG0280010454.01.T01:intron 40.0%
ATGGTGAGCAACCGTAATTA+CGG - Chr2:69889719-69889738 None:intergenic 40.0%
ATGTGTTAGGCCGATCATTA+AGG + Chr2:69889218-69889237 MsG0280010454.01.T01:intron 40.0%
CAAGCACAAGTCCTGATAAA+AGG + Chr2:69890295-69890314 MsG0280010454.01.T01:intron 40.0%
CTCAACCAAGTGAAATTCCT+TGG - Chr2:69889598-69889617 None:intergenic 40.0%
GAAATTCCTTGGCTCCAAAT+TGG - Chr2:69889587-69889606 None:intergenic 40.0%
GACAGAACTCCCATATATTG+TGG + Chr2:69891956-69891975 MsG0280010454.01.T01:CDS 40.0%
GATCTCATTTGTGCAACCAA+GGG + Chr2:69891771-69891790 MsG0280010454.01.T01:CDS 40.0%
GCTCCAAATTGGAATCAAGA+GGG - Chr2:69889576-69889595 None:intergenic 40.0%
GGAAGTGAAAGAAAGACCAA+AGG + Chr2:69891977-69891996 MsG0280010454.01.T01:CDS 40.0%
GTTCTTACCACATAGTCTTC+TGG - Chr2:69890668-69890687 None:intergenic 40.0%
TCTTACCACATAGTCTTCTG+GGG - Chr2:69890666-69890685 None:intergenic 40.0%
TCTTTCCTATGACTCGTGTT+TGG - Chr2:69890359-69890378 None:intergenic 40.0%
TGATCTCATTTGTGCAACCA+AGG + Chr2:69891770-69891789 MsG0280010454.01.T01:CDS 40.0%
TGCATAGCACTAAACATGGT+GGG + Chr2:69892172-69892191 MsG0280010454.01.T01:CDS 40.0%
TGCTTTCACCAAACTTGAAG+GGG - Chr2:69891851-69891870 None:intergenic 40.0%
TTCTTGCAATTGCTGACAGA+TGG + Chr2:69891404-69891423 MsG0280010454.01.T01:intron 40.0%
TTGACATTGCAGTTCTCATG+GGG + Chr2:69890753-69890772 MsG0280010454.01.T01:intron 40.0%
TTGAGAACAGTTTGGCAGAA+AGG + Chr2:69890900-69890919 MsG0280010454.01.T01:intron 40.0%
TTTACTTGGGTCATTGGTGT+AGG + Chr2:69892132-69892151 MsG0280010454.01.T01:intron 40.0%
TTTATCAGGACTTGTGCTTG+GGG - Chr2:69890295-69890314 None:intergenic 40.0%
TTTCTCACCTCAGCAATTCT+TGG - Chr2:69891481-69891500 None:intergenic 40.0%
! ATGGTTTGAAATGCATACGG+AGG + Chr2:69890384-69890403 MsG0280010454.01.T01:intron 40.0%
! CTTTTATCAGGACTTGTGCT+TGG - Chr2:69890297-69890316 None:intergenic 40.0%
! TTGATTCCAATTTGGAGCCA+AGG + Chr2:69889578-69889597 MsG0280010454.01.T01:CDS 40.0%
!! ATTTTTGGGGAGTCTTATGG+TGG + Chr2:69890056-69890075 MsG0280010454.01.T01:CDS 40.0%
!! CTCAAGAAATTTTCAAGGCC+TGG - Chr2:69891932-69891951 None:intergenic 40.0%
!! GGAAAATTTGCTGCTACTCT+TGG + Chr2:69890077-69890096 MsG0280010454.01.T01:CDS 40.0%
!! TCTCTTCTCAAGTGTTGATG+AGG - Chr2:69891169-69891188 None:intergenic 40.0%
!! TTCTATTGGTTACTTGGTGC+TGG + Chr2:69892028-69892047 MsG0280010454.01.T01:CDS 40.0%
!!! TACAGGGTTCAGTTTTGTTG+AGG + Chr2:69889926-69889945 MsG0280010454.01.T01:CDS 40.0%
AAACTGAACCCTGTACCAAC+TGG - Chr2:69889921-69889940 None:intergenic 45.0%
AACCATGGCCAATCATTCTC+TGG + Chr2:69889363-69889382 MsG0280010454.01.T01:CDS 45.0%
AGAACAATCGGTATTTGGGC+CGG - Chr2:69891703-69891722 None:intergenic 45.0%
AGACTGAAGACTACACTTGG+AGG + Chr2:69890131-69890150 MsG0280010454.01.T01:CDS 45.0%
CAACCAAGGGAACTGAATCT+TGG + Chr2:69891784-69891803 MsG0280010454.01.T01:CDS 45.0%
CACCATGTTTAGTGCTATGC+AGG - Chr2:69892173-69892192 None:intergenic 45.0%
CCAATCATTCTCTGGTTGCA+GGG + Chr2:69889371-69889390 MsG0280010454.01.T01:CDS 45.0%
CTGCATAGCACTAAACATGG+TGG + Chr2:69892171-69892190 MsG0280010454.01.T01:CDS 45.0%
GGAAGACTGAAGACTACACT+TGG + Chr2:69890128-69890147 MsG0280010454.01.T01:CDS 45.0%
GGCTCCAAATTGGAATCAAG+AGG - Chr2:69889577-69889596 None:intergenic 45.0%
TCCTATGACTCGTGTTTGGA+GGG - Chr2:69890355-69890374 None:intergenic 45.0%
TGAATTGAACAGGGTGGTTC+AGG + Chr2:69889520-69889539 MsG0280010454.01.T01:intron 45.0%
TGCAATTACACAGTCACCAG+CGG + Chr2:69892195-69892214 MsG0280010454.01.T01:CDS 45.0%
TGGAGCCAAGGAATTTCACT+TGG + Chr2:69889590-69889609 MsG0280010454.01.T01:CDS 45.0%
TGGAGTCTGTCCAAACATAC+CGG + Chr2:69890261-69890280 MsG0280010454.01.T01:intron 45.0%
TGGCCCTCTTGATTCCAATT+TGG + Chr2:69889570-69889589 MsG0280010454.01.T01:CDS 45.0%
TTATCAGGACTTGTGCTTGG+GGG - Chr2:69890294-69890313 None:intergenic 45.0%
TTCCTATGACTCGTGTTTGG+AGG - Chr2:69890356-69890375 None:intergenic 45.0%
! AACCAGAGAATGATTGGCCA+TGG - Chr2:69889368-69889387 None:intergenic 45.0%
! AATGATTGGCCATGGTTTGG+AGG - Chr2:69889360-69889379 None:intergenic 45.0%
! AGGACAATCCAGTTGGTACA+GGG + Chr2:69889910-69889929 MsG0280010454.01.T01:intron 45.0%
! ATGATTGGCCATGGTTTGGA+GGG - Chr2:69889359-69889378 None:intergenic 45.0%
! GAGAATGATTGGCCATGGTT+TGG - Chr2:69889363-69889382 None:intergenic 45.0%
! GTTGATGAGTTGCTAGCTCT+TGG + Chr2:69891620-69891639 MsG0280010454.01.T01:CDS 45.0%
! TAGGACAATCCAGTTGGTAC+AGG + Chr2:69889909-69889928 MsG0280010454.01.T01:intron 45.0%
! TCACAGAAGCACACATGTTC+TGG + Chr2:69889300-69889319 MsG0280010454.01.T01:intron 45.0%
! TGTTACTTGTGTAGATGGCC+AGG + Chr2:69891911-69891930 MsG0280010454.01.T01:intron 45.0%
!! GGTGCTTTGAAGAGTGAAGA+TGG + Chr2:69888608-69888627 MsG0280010454.01.T01:CDS 45.0%
!!! TTTTTTAAAAAAACATTATA+AGG + Chr2:69890419-69890438 MsG0280010454.01.T01:intron 5.0%
!!! TTTTTTAAAAAAGATTTTAT+TGG - Chr2:69890411-69890430 None:intergenic 5.0%
ATCATTCTCTGGTTGCAGGG+AGG + Chr2:69889374-69889393 MsG0280010454.01.T01:CDS 50.0%
CCCTGCAACCAGAGAATGAT+TGG - Chr2:69889374-69889393 None:intergenic 50.0%
GAGCCAAGATTCAGTTCCCT+TGG - Chr2:69891790-69891809 None:intergenic 50.0%
GATCTCCCCAGAAGACTATG+TGG + Chr2:69890658-69890677 MsG0280010454.01.T01:CDS 50.0%
GCCAATCATTCTCTGGTTGC+AGG + Chr2:69889370-69889389 MsG0280010454.01.T01:CDS 50.0%
GCCCTGCATAGCACTAAACA+TGG + Chr2:69892168-69892187 MsG0280010454.01.T01:CDS 50.0%
GCTATGCAGGGCTGATCAAT+AGG - Chr2:69892160-69892179 None:intergenic 50.0%
GGTGGTTCAGGAGTTGGATT+CGG + Chr2:69889532-69889551 MsG0280010454.01.T01:CDS 50.0%
GTGTGGTATTAGCAGACAGC+TGG + Chr2:69890636-69890655 MsG0280010454.01.T01:CDS 50.0%
TATCAGGACTTGTGCTTGGG+GGG - Chr2:69890293-69890312 None:intergenic 50.0%
TGTTGGGCCAATCATCGTGT+TGG + Chr2:69888983-69889002 MsG0280010454.01.T01:intron 50.0%
TTACAGAAGCCCCTACAGAG+TGG + Chr2:69889328-69889347 MsG0280010454.01.T01:CDS 50.0%
! CAGAAGCACACATGTTCTGG+TGG + Chr2:69889303-69889322 MsG0280010454.01.T01:intron 50.0%
AGGGATCCTCCACTCTGTAG+GGG - Chr2:69889340-69889359 None:intergenic 55.0%
GAACAGGGTGGTTCAGGAGT+TGG + Chr2:69889526-69889545 MsG0280010454.01.T01:intron 55.0%
GAGGGATCCTCCACTCTGTA+GGG - Chr2:69889341-69889360 None:intergenic 55.0%
GCCCTCCAAACACGAGTCAT+AGG + Chr2:69890351-69890370 MsG0280010454.01.T01:intron 55.0%
TGGAGGATCCCTCCAAACCA+TGG + Chr2:69889348-69889367 MsG0280010454.01.T01:CDS 55.0%
CAGAAGCCCCTACAGAGTGG+AGG + Chr2:69889331-69889350 MsG0280010454.01.T01:CDS 60.0%
GACTCGTGTTTGGAGGGCTG+TGG - Chr2:69890349-69890368 None:intergenic 60.0%
GGAGGGATCCTCCACTCTGT+AGG - Chr2:69889342-69889361 None:intergenic 60.0%
GGGGCGTGGACCGGTATGTT+TGG - Chr2:69890274-69890293 None:intergenic 65.0%
GGACTTGTGCTTGGGGGGCG+TGG - Chr2:69890288-69890307 None:intergenic 70.0%
! TGTGCTTGGGGGGCGTGGAC+CGG - Chr2:69890283-69890302 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 69888539 69892222 69888539 ID=MsG0280010454.01;Name=MsG0280010454.01
Chr2 mRNA 69888539 69892222 69888539 ID=MsG0280010454.01.T01;Parent=MsG0280010454.01;Name=MsG0280010454.01.T01;_AED=0.20;_eAED=0.21;_QI=0|0|0|1|1|1|13|0|457
Chr2 exon 69888539 69888665 69888539 ID=MsG0280010454.01.T01:exon:9785;Parent=MsG0280010454.01.T01
Chr2 exon 69889306 69889400 69889306 ID=MsG0280010454.01.T01:exon:9786;Parent=MsG0280010454.01.T01
Chr2 exon 69889532 69889639 69889532 ID=MsG0280010454.01.T01:exon:9787;Parent=MsG0280010454.01.T01
Chr2 exon 69889912 69890152 69889912 ID=MsG0280010454.01.T01:exon:9788;Parent=MsG0280010454.01.T01
Chr2 exon 69890636 69890679 69890636 ID=MsG0280010454.01.T01:exon:9789;Parent=MsG0280010454.01.T01
Chr2 exon 69890765 69890832 69890765 ID=MsG0280010454.01.T01:exon:9790;Parent=MsG0280010454.01.T01
Chr2 exon 69890910 69891015 69890910 ID=MsG0280010454.01.T01:exon:9791;Parent=MsG0280010454.01.T01
Chr2 exon 69891120 69891328 69891120 ID=MsG0280010454.01.T01:exon:9792;Parent=MsG0280010454.01.T01
Chr2 exon 69891423 69891492 69891423 ID=MsG0280010454.01.T01:exon:9793;Parent=MsG0280010454.01.T01
Chr2 exon 69891620 69891670 69891620 ID=MsG0280010454.01.T01:exon:9794;Parent=MsG0280010454.01.T01
Chr2 exon 69891768 69891820 69891768 ID=MsG0280010454.01.T01:exon:9795;Parent=MsG0280010454.01.T01
Chr2 exon 69891925 69892057 69891925 ID=MsG0280010454.01.T01:exon:9796;Parent=MsG0280010454.01.T01
Chr2 exon 69892154 69892222 69892154 ID=MsG0280010454.01.T01:exon:9797;Parent=MsG0280010454.01.T01
Chr2 CDS 69888539 69888665 69888539 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69889306 69889400 69889306 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69889532 69889639 69889532 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69889912 69890152 69889912 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69890636 69890679 69890636 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69890765 69890832 69890765 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69890910 69891015 69890910 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69891120 69891328 69891120 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69891423 69891492 69891423 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69891620 69891670 69891620 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69891768 69891820 69891768 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69891925 69892057 69891925 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Chr2 CDS 69892154 69892222 69892154 ID=MsG0280010454.01.T01:cds;Parent=MsG0280010454.01.T01
Gene Sequence

>MsG0280010454.01.T01

ATGGAGAAGCTTTATGTGTTTTTTGTCACTCTTGTATTCCTTGGTTTCCTATTTTATGAAGGAAAAGTTGGTGCTTTGAAGAGTGAAGATGGATTAGAAGAATGGGGATATGTGCAAGTTAGACCTAAAGCACACATGTTCTGGTGGCTTTACAGAAGCCCCTACAGAGTGGAGGATCCCTCCAAACCATGGCCAATCATTCTCTGGTTGCAGGGAGGACCTGGTGGTTCAGGAGTTGGATTCGGAAATTTTATAGAGTTTGGCCCTCTTGATTCCAATTTGGAGCCAAGGAATTTCACTTGGTTGAGAAAAGCAGATTTGCTATTTGTGGACAATCCAGTTGGTACAGGGTTCAGTTTTGTTGAGGATTCAAAATTACTTGTCAAAACTGATGAGGAGGCAGCCACTGACTTGACTACACTATTAATCAAGATATTTAATAATGATCCAAGTCTACAAAAATGTAATTTGTTCATTTTTGGGGAGTCTTATGGTGGAAAATTTGCTGCTACTCTTGGATTATCAGCCCTCAAAGCAATTAAAAAAGGAAGACTGAAGACTACACTTGGAGGTGTGGTATTAGCAGACAGCTGGATCTCCCCAGAAGACTATGTGTTCTCATGGGGTCCTCTTTTGAAAGACATGTCAAGAATTGATGACAATGGACTGCAAAAATCAAACATTTTGGCAGAAAGGATCAAGCAACAACTTGAAGATGGTGAATTTGTTAATGCAACTTCTACATGGATTCAACTTGAATATGTAATTAGAAATAACAGCAACTTTGTGGATTTCTATAATTTTATGGAGGACAACAATGGAAGTTATTCAGCAACCTCATCAACACTTGAGAAGAGATTATTCAAAGAAATATCAATGAGGCGTTACTCCAAGTATCTTACTTCATTGAAAAATTCTAATGCTGTTAATGGTGATCTAGACACCTTATTAAATGGTGTCACAAAGAAAAAATTGAAGATCATTCCCAAGAATATTACATGGTATGCGGAGTCAGTTTATGTGATTGAAATTTTTTTAGGTGAATTTATGAAACCAAGAATTGCTGAGGTTGATGAGTTGCTAGCTCTTGGAGTCAATGTAACTGTGTACAATGGACAACTTGATCTCATTTGTGCAACCAAGGGAACTGAATCTTGGCTCAAGAAACTCAAATGGCCAGGCCTTGAAAATTTCTTGAGTAAAGACAGAACTCCCATATATTGTGGAAGTGAAAGAAAGACCAAAGGCTTCTTTAAATCATATGAAAACCTAAACTTCTATTGGTTACTTGGTGCTGGCCATTTTGTACCTATTGATCAGCCCTGCATAGCACTAAACATGGTGGGTGCAATTACACAGTCACCAGCGGTTTGA
Protein sequence

>MsG0280010454.01.T01

MEKLYVFFVTLVFLGFLFYEGKVGALKSEDGLEEWGYVQVRPKAHMFWWLYRSPYRVEDPSKPWPIILWLQGGPGGSGVGFGNFIEFGPLDSNLEPRNFTWLRKADLLFVDNPVGTGFSFVEDSKLLVKTDEEAATDLTTLLIKIFNNDPSLQKCNLFIFGESYGGKFAATLGLSALKAIKKGRLKTTLGGVVLADSWISPEDYVFSWGPLLKDMSRIDDNGLQKSNILAERIKQQLEDGEFVNATSTWIQLEYVIRNNSNFVDFYNFMEDNNGSYSATSSTLEKRLFKEISMRRYSKYLTSLKNSNAVNGDLDTLLNGVTKKKLKIIPKNITWYAESVYVIEIFLGEFMKPRIAEVDELLALGVNVTVYNGQLDLICATKGTESWLKKLKWPGLENFLSKDRTPIYCGSERKTKGFFKSYENLNFYWLLGAGHFVPIDQPCIALNMVGAITQSPAV*