AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018984.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018984.01.T02 MTR_4g021530 86.957 207 27 0 37 243 1 207 5.47e-132 380
MsG0480018984.01.T02 MTR_4g021535 86.432 199 27 0 45 243 5 203 1.81e-126 366
MsG0480018984.01.T02 MTR_4g021490 86.473 207 28 0 37 243 1 207 3.07e-125 363
MsG0480018984.01.T02 MTR_4g021520 84.058 207 33 0 37 243 1 207 2.66e-123 357
MsG0480018984.01.T02 MTR_4g021520 84.058 207 33 0 37 243 1 207 7.03e-123 357
MsG0480018984.01.T02 MTR_4g021500 82.609 207 36 0 37 243 1 207 1.79e-115 351
MsG0480018984.01.T02 MTR_4g021500 71.759 216 58 2 28 243 430 642 2.88e-100 311
MsG0480018984.01.T02 MTR_4g021500 82.609 207 36 0 37 243 1 207 2.53e-115 351
MsG0480018984.01.T02 MTR_4g021500 71.759 216 58 2 28 243 430 642 3.92e-100 311
MsG0480018984.01.T02 MTR_4g021510 85.792 183 26 0 61 243 24 206 5.14e-113 332
MsG0480018984.01.T02 MTR_4g021535 84.795 171 25 1 45 214 5 175 1.14e-103 307
MsG0480018984.01.T02 MTR_2g018590 60.622 193 73 2 53 243 10 201 2.25e-80 249
MsG0480018984.01.T02 MTR_3g100420 59.694 196 72 3 55 243 30 225 6.54e-80 248
MsG0480018984.01.T02 MTR_2g018600 61.878 181 67 2 64 243 22 201 3.31e-76 238
MsG0480018984.01.T02 MTR_2g018630 59.669 181 71 2 64 243 25 204 1.45e-73 231
MsG0480018984.01.T02 MTR_3g045770 47.568 185 94 3 60 243 11 193 5.94e-55 182
MsG0480018984.01.T02 MTR_2g009200 45.946 185 94 3 60 243 13 192 6.50e-48 164
MsG0480018984.01.T02 MTR_7g080180 41.146 192 111 2 54 243 6 197 1.00e-46 161
MsG0480018984.01.T02 MTR_7g080180 41.146 192 111 2 54 243 6 197 2.14e-46 161
MsG0480018984.01.T02 MTR_8g011350 47.337 169 87 2 76 243 31 198 8.63e-46 159
MsG0480018984.01.T02 MTR_8g011350 47.337 169 87 2 76 243 31 198 1.21e-45 159
MsG0480018984.01.T02 MTR_7g051430 44.444 171 93 2 74 243 28 197 5.56e-44 153
MsG0480018984.01.T02 MTR_7g051430 44.444 171 93 2 74 243 28 197 3.26e-43 152
MsG0480018984.01.T02 MTR_2g018630 57.143 98 41 1 147 243 2 99 1.94e-31 119
MsG0480018984.01.T02 MTR_4g057600 41.429 140 75 3 105 243 109 242 9.10e-29 113
MsG0480018984.01.T02 MTR_4g075150 35.263 190 114 5 54 240 13 196 2.48e-27 109
MsG0480018984.01.T02 MTR_4g075150 35.263 190 114 5 54 240 13 196 2.78e-27 109
MsG0480018984.01.T02 MTR_4g057585 39.869 153 84 4 92 243 98 243 7.10e-27 108
MsG0480018984.01.T02 MTR_4g057595 39.869 153 84 4 92 243 99 244 9.33e-27 107
MsG0480018984.01.T02 MTR_1g050545 38.571 140 79 3 105 243 97 230 1.10e-26 107
MsG0480018984.01.T02 MTR_2g095730 40.141 142 76 5 105 243 108 243 4.66e-26 105
MsG0480018984.01.T02 MTR_4g057570 40.146 137 75 3 105 240 103 233 4.83e-26 105
MsG0480018984.01.T02 MTR_3g079560 34.503 171 103 5 73 240 75 239 6.98e-26 105
MsG0480018984.01.T02 MTR_2g095750 40.714 140 77 4 105 243 114 248 9.68e-26 105
MsG0480018984.01.T02 MTR_1g020090 35.503 169 100 5 75 240 89 251 2.34e-25 103
MsG0480018984.01.T02 MTR_3g079630 33.333 171 105 5 73 240 75 239 1.44e-24 101
MsG0480018984.01.T02 MTR_1g094155 38.571 140 78 4 105 243 104 236 1.72e-24 101
MsG0480018984.01.T02 MTR_3g079620 33.918 171 104 5 73 240 75 239 2.31e-24 101
MsG0480018984.01.T02 MTR_3g079600 33.918 171 104 5 73 240 73 237 2.41e-24 101
MsG0480018984.01.T02 MTR_2g062980 33.708 178 107 7 69 241 32 203 2.57e-24 100
MsG0480018984.01.T02 MTR_3g079590 33.333 171 105 5 73 240 75 239 3.26e-24 100
MsG0480018984.01.T02 MTR_3g079570 32.749 171 106 5 73 240 76 240 1.85e-23 98.6
MsG0480018984.01.T02 MTR_1g021010 31.319 182 115 6 63 240 62 237 2.16e-23 98.6
MsG0480018984.01.T02 MTR_3g434850 30.457 197 119 7 49 240 6 189 4.22e-23 97.4
MsG0480018984.01.T02 MTR_1g095540 32.620 187 114 7 50 230 6 186 5.27e-23 97.1
MsG0480018984.01.T02 MTR_1g021020 31.868 182 114 7 63 240 64 239 9.36e-23 96.7
MsG0480018984.01.T02 MTR_3g034290 32.353 170 105 6 74 240 73 235 1.22e-22 95.9
MsG0480018984.01.T02 MTR_2g449850 33.696 184 103 6 64 240 28 199 1.34e-22 95.9
MsG0480018984.01.T02 MTR_4g122960 32.353 170 106 4 74 240 37 200 1.60e-22 95.9
MsG0480018984.01.T02 MTR_0003s0560 33.529 170 103 6 74 240 72 234 1.74e-22 94.7
MsG0480018984.01.T02 MTR_1g095560 34.884 172 101 6 74 240 31 196 2.26e-22 95.5
MsG0480018984.01.T02 MTR_1g095560 35.294 170 99 6 74 238 31 194 2.47e-22 95.1
MsG0480018984.01.T02 MTR_4g089155 33.333 168 104 5 76 240 54 216 3.03e-22 95.1
MsG0480018984.01.T02 MTR_3g034290 32.353 170 105 6 74 240 73 235 3.19e-22 95.1
MsG0480018984.01.T02 MTR_4g122950 32.335 167 104 4 75 238 38 198 4.39e-22 94.7
MsG0480018984.01.T02 MTR_3g090150 30.928 194 117 7 54 240 11 194 5.24e-22 94.4
MsG0480018984.01.T02 MTR_2g062990 29.897 194 125 7 52 240 15 202 6.77e-22 94.0
MsG0480018984.01.T02 MTR_2g081620 30.769 195 119 7 50 240 21 203 7.07e-22 94.0
MsG0480018984.01.T02 MTR_2g063000 31.429 210 128 10 40 240 1 203 1.26e-21 93.2
MsG0480018984.01.T02 MTR_0003s0560 33.529 170 103 6 74 240 72 234 1.32e-21 93.2
MsG0480018984.01.T02 MTR_7g021130 27.749 191 126 5 51 238 6 187 1.73e-21 92.8
MsG0480018984.01.T02 MTR_7g013790 30.939 181 111 6 67 240 23 196 2.51e-21 92.4
MsG0480018984.01.T02 MTR_3g498755 30.588 170 106 5 73 238 12 173 4.72e-21 91.7
MsG0480018984.01.T02 MTR_2g012860 32.000 175 109 5 69 240 35 202 6.69e-21 91.3
MsG0480018984.01.T02 MTR_1g040370 31.953 169 103 5 75 240 30 189 9.35e-21 90.5
MsG0480018984.01.T02 MTR_2g012850 32.143 168 104 5 76 240 36 196 1.16e-20 90.5
MsG0480018984.01.T02 MTR_8g099930 32.164 171 104 6 69 236 27 188 1.17e-20 90.5
MsG0480018984.01.T02 MTR_5g072570 32.335 167 104 6 76 240 30 189 1.45e-20 90.1
MsG0480018984.01.T02 MTR_3g090130 32.934 167 103 5 76 240 29 188 1.81e-20 90.1
MsG0480018984.01.T02 MTR_4g084710 30.723 166 91 5 77 236 39 186 1.06e-15 76.3
MsG0480018984.01.T02 MTR_5g097180 31.111 135 83 3 106 236 56 184 2.05e-15 75.5
MsG0480018984.01.T02 MTR_2g063000 35.338 133 74 7 79 205 42 168 5.93e-15 73.9
MsG0480018984.01.T02 MTR_2g095710 32.609 138 81 4 106 243 106 231 5.81e-13 68.2
MsG0480018984.01.T02 MTR_0075s0010 32.800 125 67 5 75 192 7 121 5.49e-12 64.7
MsG0480018984.01.T02 MTR_1g102130 33.333 123 73 5 71 192 87 201 7.05e-12 65.1
MsG0480018984.01.T01 MTR_4g021490 80.977 389 45 1 1 360 1 389 0.0 626
MsG0480018984.01.T01 MTR_4g021530 77.892 389 57 1 1 360 1 389 0.0 619
MsG0480018984.01.T01 MTR_4g021535 77.261 387 57 2 3 360 1 385 0.0 611
MsG0480018984.01.T01 MTR_4g021520 76.864 389 61 1 1 360 1 389 0.0 602
MsG0480018984.01.T01 MTR_4g021520 76.864 389 61 1 1 360 1 389 0.0 602
MsG0480018984.01.T01 MTR_4g021500 75.835 389 65 1 1 360 1 389 0.0 591
MsG0480018984.01.T01 MTR_4g021500 71.816 369 74 2 21 360 457 824 6.10e-179 520
MsG0480018984.01.T01 MTR_4g021500 75.835 389 65 1 1 360 1 389 0.0 590
MsG0480018984.01.T01 MTR_4g021500 69.106 369 66 3 21 360 457 806 6.00e-166 486
MsG0480018984.01.T01 MTR_4g021510 76.438 365 57 1 25 360 24 388 0.0 566
MsG0480018984.01.T01 MTR_4g021535 66.925 387 50 3 3 360 1 338 1.65e-180 507
MsG0480018984.01.T01 MTR_2g018590 53.158 380 141 6 17 360 10 388 1.18e-135 395
MsG0480018984.01.T01 MTR_3g100420 51.680 387 143 7 18 360 29 415 2.05e-133 390
MsG0480018984.01.T01 MTR_2g018600 52.174 368 140 6 28 360 22 388 3.12e-126 371
MsG0480018984.01.T01 MTR_2g018630 52.589 367 133 8 28 360 25 384 1.68e-123 364
MsG0480018984.01.T01 MTR_3g045770 40.771 363 185 10 24 360 11 369 2.64e-81 255
MsG0480018984.01.T01 MTR_2g018630 49.648 284 103 7 111 360 2 279 1.46e-80 250
MsG0480018984.01.T01 MTR_7g080180 31.961 413 210 8 18 360 6 417 2.69e-68 222
MsG0480018984.01.T01 MTR_7g051430 32.688 413 210 11 14 361 6 415 4.10e-68 220
MsG0480018984.01.T01 MTR_7g080180 31.961 413 210 8 18 360 6 417 7.00e-68 222
MsG0480018984.01.T01 MTR_7g051430 32.524 412 210 11 14 360 6 414 2.83e-66 218
MsG0480018984.01.T01 MTR_8g011350 34.343 396 195 12 29 360 20 414 3.06e-64 212
MsG0480018984.01.T01 MTR_8g011350 34.343 396 195 12 29 360 20 414 3.95e-64 212
MsG0480018984.01.T01 MTR_2g009200 33.943 383 167 10 24 360 13 355 4.48e-60 200
MsG0480018984.01.T01 MTR_4g057600 39.891 183 102 4 69 249 109 285 6.39e-34 131
MsG0480018984.01.T01 MTR_1g050545 37.173 191 112 4 69 257 97 281 2.07e-32 127
MsG0480018984.01.T01 MTR_2g062980 31.008 258 162 9 25 274 24 273 1.03e-31 124
MsG0480018984.01.T01 MTR_4g075150 32.946 258 162 7 18 270 13 264 1.28e-31 124
MsG0480018984.01.T01 MTR_4g075150 32.946 258 162 7 18 270 13 264 1.31e-31 124
MsG0480018984.01.T01 MTR_4g057585 35.526 228 125 6 17 229 45 265 2.41e-31 124
MsG0480018984.01.T01 MTR_4g057595 40.000 175 97 4 56 229 99 266 3.60e-31 123
MsG0480018984.01.T01 MTR_4g122960 28.358 335 202 14 39 354 38 353 2.96e-30 120
MsG0480018984.01.T01 MTR_2g095730 38.503 187 105 6 69 251 108 288 3.05e-30 121
MsG0480018984.01.T01 MTR_2g081620 31.343 268 163 10 14 274 21 274 3.20e-30 120
MsG0480018984.01.T01 MTR_4g057570 31.010 287 168 10 69 337 103 377 3.67e-30 120
MsG0480018984.01.T01 MTR_2g449850 27.807 374 204 12 28 360 28 376 6.37e-30 119
MsG0480018984.01.T01 MTR_2g095750 40.741 162 90 4 69 229 114 270 7.85e-30 120
MsG0480018984.01.T01 MTR_3g434850 26.440 382 228 14 13 360 6 368 1.94e-29 118
MsG0480018984.01.T01 MTR_1g094155 36.126 191 113 5 69 257 104 287 2.41e-29 118
MsG0480018984.01.T01 MTR_3g034290 33.180 217 130 8 39 249 74 281 2.96e-29 117
MsG0480018984.01.T01 MTR_0003s0560 30.980 255 154 10 39 287 73 311 4.00e-29 115
MsG0480018984.01.T01 MTR_1g095540 31.474 251 155 9 14 255 6 248 7.00e-29 116
MsG0480018984.01.T01 MTR_4g122950 27.795 331 202 13 39 349 38 351 7.74e-29 117
MsG0480018984.01.T01 MTR_1g040370 28.701 331 196 15 39 360 30 329 7.90e-29 116
MsG0480018984.01.T01 MTR_8g099930 28.255 361 215 14 33 360 27 376 1.18e-28 116
MsG0480018984.01.T01 MTR_3g034290 33.180 217 130 8 39 249 74 281 2.10e-28 115
MsG0480018984.01.T01 MTR_2g062990 30.435 253 160 10 16 260 15 259 2.63e-28 115
MsG0480018984.01.T01 MTR_3g079560 34.375 192 117 5 37 225 75 260 2.74e-28 115
MsG0480018984.01.T01 MTR_1g095560 35.556 225 127 10 39 254 32 247 3.38e-28 114
MsG0480018984.01.T01 MTR_1g095560 35.556 225 127 10 39 254 32 247 4.00e-28 115
MsG0480018984.01.T01 MTR_0003s0560 30.980 255 154 10 39 287 73 311 5.18e-28 114
MsG0480018984.01.T01 MTR_4g089155 32.751 229 144 7 40 264 54 276 5.38e-28 114
MsG0480018984.01.T01 MTR_3g498755 26.536 358 219 13 37 360 12 359 9.31e-28 113
MsG0480018984.01.T01 MTR_3g090150 30.483 269 156 12 18 269 11 265 9.54e-28 114
MsG0480018984.01.T01 MTR_1g021010 31.474 251 147 10 27 269 62 295 9.62e-28 114
MsG0480018984.01.T01 MTR_7g021130 28.627 255 167 7 11 261 2 245 1.55e-27 113
MsG0480018984.01.T01 MTR_3g079590 33.854 192 118 5 37 225 75 260 1.86e-27 113
MsG0480018984.01.T01 MTR_1g020090 32.794 247 144 9 39 270 89 328 3.25e-27 112
MsG0480018984.01.T01 MTR_2g012850 32.174 230 142 8 40 264 36 256 4.51e-27 111
MsG0480018984.01.T01 MTR_7g013790 30.000 260 165 9 31 282 23 273 5.17e-27 111
MsG0480018984.01.T01 MTR_2g063000 30.855 269 165 13 4 260 1 260 5.50e-27 111
MsG0480018984.01.T01 MTR_2g012860 32.083 240 142 8 33 268 35 257 7.25e-27 111
MsG0480018984.01.T01 MTR_3g090130 30.588 255 155 9 40 283 29 272 8.86e-27 110
MsG0480018984.01.T01 MTR_3g079620 33.854 192 118 5 37 225 75 260 3.31e-26 109
MsG0480018984.01.T01 MTR_3g079630 33.333 192 119 5 37 225 75 260 4.62e-26 109
MsG0480018984.01.T01 MTR_5g072570 32.870 216 131 8 40 250 30 236 8.37e-26 108
MsG0480018984.01.T01 MTR_3g079570 33.333 192 119 5 37 225 76 261 9.61e-26 108
MsG0480018984.01.T01 MTR_3g079600 33.854 192 118 5 37 225 73 258 1.21e-25 107
MsG0480018984.01.T01 MTR_1g021020 32.843 204 126 8 27 225 64 261 2.14e-25 107
MsG0480018984.01.T01 MTR_5g097180 26.282 312 196 10 70 361 56 353 8.49e-21 93.6
MsG0480018984.01.T01 MTR_2g063000 30.804 224 113 11 43 260 42 229 4.43e-18 85.5
MsG0480018984.01.T01 MTR_2g095710 32.787 183 110 5 70 251 106 276 1.05e-17 84.7
MsG0480018984.01.T01 MTR_4g084710 27.434 339 206 13 41 361 39 355 8.56e-17 81.6
MsG0480018984.01.T01 MTR_0075s0010 32.800 125 67 5 39 156 7 121 9.37e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018984.01.T02 AT3G12203 58.462 195 77 3 50 243 6 197 1.01e-72 228
MsG0480018984.01.T02 AT3G12203 62.428 173 63 2 72 243 5 176 2.83e-72 226
MsG0480018984.01.T02 AT2G23010 56.842 190 81 1 54 243 3 191 2.97e-71 224
MsG0480018984.01.T02 AT2G23010 56.842 190 81 1 54 243 3 191 3.31e-71 224
MsG0480018984.01.T02 AT3G12220 60.116 173 67 2 72 243 23 194 8.06e-71 222
MsG0480018984.01.T02 AT3G12240 58.960 173 69 2 72 243 24 195 1.35e-70 223
MsG0480018984.01.T02 AT2G22980 58.427 178 72 2 67 243 17 193 4.53e-70 221
MsG0480018984.01.T02 AT3G12220 60.116 173 67 2 72 243 23 194 5.04e-70 221
MsG0480018984.01.T02 AT2G22980 58.427 178 72 2 67 243 17 193 8.56e-70 221
MsG0480018984.01.T02 AT2G22980 58.427 178 72 2 67 243 17 193 9.82e-70 220
MsG0480018984.01.T02 AT2G22920 58.889 180 72 2 65 243 14 192 1.07e-69 217
MsG0480018984.01.T02 AT2G22970 58.989 178 71 2 67 243 16 192 1.90e-69 216
MsG0480018984.01.T02 AT2G22980 57.778 180 72 3 67 243 17 195 9.56e-69 215
MsG0480018984.01.T02 AT2G22920 58.889 180 72 2 65 243 14 192 1.14e-68 217
MsG0480018984.01.T02 AT2G22920 58.889 180 72 2 65 243 14 192 1.73e-68 217
MsG0480018984.01.T02 AT2G22970 58.989 178 71 2 67 243 16 192 1.75e-68 216
MsG0480018984.01.T02 AT2G22970 58.989 178 71 2 67 243 16 192 2.31e-68 217
MsG0480018984.01.T02 AT2G22970 58.989 178 71 2 67 243 16 192 4.24e-68 216
MsG0480018984.01.T02 AT3G10450 59.538 173 68 2 72 243 25 196 2.44e-67 214
MsG0480018984.01.T02 AT3G12230 56.069 173 74 2 72 243 23 194 6.74e-67 213
MsG0480018984.01.T02 AT3G10450 59.538 173 68 2 72 243 25 196 8.60e-67 213
MsG0480018984.01.T02 AT1G73310 58.192 177 71 3 68 243 26 200 2.14e-66 212
MsG0480018984.01.T02 AT1G73310 58.192 177 71 3 68 243 26 200 2.60e-66 212
MsG0480018984.01.T02 AT1G73280 56.497 177 75 2 68 243 25 200 6.06e-66 209
MsG0480018984.01.T02 AT1G73270 57.627 177 72 3 68 243 26 200 1.22e-65 210
MsG0480018984.01.T02 AT1G73270 57.627 177 72 3 68 243 26 200 1.25e-65 210
MsG0480018984.01.T02 AT2G23000 55.618 178 77 2 66 243 16 191 2.53e-65 209
MsG0480018984.01.T02 AT2G23000 55.618 178 77 2 66 243 16 191 2.53e-65 209
MsG0480018984.01.T02 AT1G73280 56.497 177 75 2 68 243 25 200 4.51e-65 209
MsG0480018984.01.T02 AT1G73290 56.497 177 74 3 68 243 25 199 4.66e-65 204
MsG0480018984.01.T02 AT1G33540 54.802 177 78 2 68 243 21 196 8.07e-65 209
MsG0480018984.01.T02 AT2G22990 55.114 176 78 1 68 243 15 189 1.01e-64 207
MsG0480018984.01.T02 AT2G22990 55.114 176 78 1 68 243 15 189 1.03e-64 208
MsG0480018984.01.T02 AT2G22990 55.114 176 78 1 68 243 15 189 1.81e-64 207
MsG0480018984.01.T02 AT1G73300 56.497 177 74 3 68 243 26 200 3.14e-64 206
MsG0480018984.01.T02 AT1G73300 56.497 177 74 3 68 243 26 200 3.14e-64 206
MsG0480018984.01.T02 AT1G73290 56.497 177 74 3 68 243 25 199 1.06e-63 204
MsG0480018984.01.T02 AT1G73290 56.497 177 74 3 68 243 25 199 2.86e-63 204
MsG0480018984.01.T02 AT5G09640 53.514 185 84 2 60 243 11 194 9.50e-63 203
MsG0480018984.01.T02 AT5G36180 55.367 177 76 3 68 243 26 200 4.18e-62 201
MsG0480018984.01.T02 AT2G22990 52.841 176 73 2 68 243 15 180 3.53e-58 190
MsG0480018984.01.T02 AT3G12220 58.278 151 61 2 94 243 15 164 2.66e-57 187
MsG0480018984.01.T02 AT3G10450 56.954 151 63 2 94 243 4 153 1.20e-54 180
MsG0480018984.01.T02 AT1G33540 54.305 151 67 2 94 243 4 153 2.33e-54 180
MsG0480018984.01.T02 AT3G10450 56.954 151 63 2 94 243 4 153 2.51e-54 179
MsG0480018984.01.T02 AT3G12203 59.712 139 55 1 106 243 1 139 1.61e-53 177
MsG0480018984.01.T02 AT4G12910 41.667 180 103 2 65 243 24 202 1.91e-44 155
MsG0480018984.01.T02 AT4G12910 41.667 180 103 2 65 243 24 202 4.06e-44 155
MsG0480018984.01.T02 AT3G25420 39.378 193 112 4 53 243 6 195 1.04e-38 140
MsG0480018984.01.T02 AT3G56540 38.217 157 88 5 76 230 80 229 3.80e-29 110
MsG0480018984.01.T02 AT3G52020 38.922 167 93 5 76 240 80 239 1.14e-28 113
MsG0480018984.01.T02 AT5G23210 35.135 185 109 6 59 240 37 213 9.96e-27 107
MsG0480018984.01.T02 AT5G23210 35.135 185 109 6 59 240 37 213 1.98e-26 107
MsG0480018984.01.T02 AT5G08260 35.122 205 116 8 46 240 4 201 1.19e-25 104
MsG0480018984.01.T02 AT3G45010 37.857 140 79 3 105 243 115 247 4.34e-25 103
MsG0480018984.01.T02 AT5G22980 38.571 140 78 4 105 243 112 244 6.15e-25 102
MsG0480018984.01.T02 AT1G73310 52.577 97 45 1 148 243 2 98 9.29e-25 100
MsG0480018984.01.T02 AT2G35780 35.632 174 101 6 70 238 24 191 2.25e-24 100
MsG0480018984.01.T02 AT1G73280 53.763 93 42 1 152 243 6 98 4.26e-24 99.0
MsG0480018984.01.T02 AT5G36180 51.546 97 46 1 148 243 2 98 1.32e-23 97.4
MsG0480018984.01.T02 AT1G43780 34.731 167 100 5 76 240 38 197 1.42e-23 99.0
MsG0480018984.01.T02 AT5G36180 53.763 93 42 1 152 243 6 98 1.60e-23 97.4
MsG0480018984.01.T02 AT5G36180 53.763 93 42 1 152 243 6 98 1.63e-23 97.4
MsG0480018984.01.T02 AT5G36180 53.763 93 42 1 152 243 6 98 1.63e-23 97.4
MsG0480018984.01.T02 AT4G15100 34.337 166 99 5 76 238 45 203 3.59e-23 97.8
MsG0480018984.01.T02 AT1G28110 32.335 167 101 5 75 238 31 188 6.25e-23 97.1
MsG0480018984.01.T02 AT1G28110 32.335 167 101 5 75 238 31 188 6.25e-23 97.1
MsG0480018984.01.T02 AT2G33530 33.714 175 104 7 67 238 25 190 6.26e-23 97.1
MsG0480018984.01.T02 AT3G10410 37.857 140 77 5 106 243 114 245 1.71e-22 95.9
MsG0480018984.01.T02 AT3G52000 31.325 166 107 4 76 240 64 223 1.85e-22 95.9
MsG0480018984.01.T02 AT4G30810 30.303 198 124 7 51 240 8 199 1.55e-21 93.2
MsG0480018984.01.T02 AT3G63470 32.143 168 104 6 76 240 82 242 2.81e-21 92.4
MsG0480018984.01.T02 AT1G61130 32.609 184 114 5 60 240 16 192 3.45e-21 92.0
MsG0480018984.01.T02 AT3G07990 34.132 167 99 6 75 236 33 193 3.49e-21 92.0
MsG0480018984.01.T02 AT3G02110 33.908 174 105 7 70 240 32 198 3.66e-21 92.0
MsG0480018984.01.T02 AT3G52010 30.159 189 119 5 59 240 46 228 4.94e-21 91.7
MsG0480018984.01.T02 AT5G42230 34.731 167 100 5 76 240 29 188 5.52e-21 91.7
MsG0480018984.01.T02 AT5G42230 34.731 167 100 5 76 240 29 188 5.52e-21 91.7
MsG0480018984.01.T02 AT1G11080 33.929 168 101 6 76 240 51 211 8.61e-21 90.9
MsG0480018984.01.T02 AT1G11080 33.929 168 101 6 76 240 51 211 8.93e-21 90.9
MsG0480018984.01.T02 AT2G12480 33.533 167 102 5 76 240 32 191 1.35e-20 90.1
MsG0480018984.01.T02 AT2G12480 33.533 167 102 5 76 240 32 191 1.42e-20 90.1
MsG0480018984.01.T02 AT2G12480 33.533 167 102 5 76 240 32 191 1.44e-20 90.1
MsG0480018984.01.T02 AT2G12480 33.533 167 102 5 76 240 32 191 1.55e-20 90.1
MsG0480018984.01.T02 AT2G35770 29.798 198 126 6 50 240 8 199 2.21e-20 89.7
MsG0480018984.01.T02 AT4G30610 32.386 176 108 7 70 241 27 195 2.37e-20 89.7
MsG0480018984.01.T02 AT5G22960 32.680 153 76 4 92 243 36 162 7.35e-20 84.3
MsG0480018984.01.T02 AT3G17180 31.844 179 109 8 68 240 30 201 2.23e-19 86.7
MsG0480018984.01.T02 AT3G17180 31.844 179 109 8 68 240 30 201 2.88e-19 86.7
MsG0480018984.01.T02 AT5G42240 31.737 167 105 5 76 240 33 192 1.11e-18 85.1
MsG0480018984.01.T02 AT2G05850 30.994 171 106 5 76 240 64 228 1.38e-18 84.7
MsG0480018984.01.T02 AT2G24000 31.609 174 110 5 70 240 25 192 1.43e-18 84.7
MsG0480018984.01.T02 AT2G24010 32.184 174 108 6 70 240 25 191 1.75e-18 84.3
MsG0480018984.01.T02 AT2G22990 50.667 75 37 0 169 243 1 75 2.67e-18 82.8
MsG0480018984.01.T02 AT2G22990 50.667 75 37 0 169 243 1 75 2.92e-18 82.4
MsG0480018984.01.T02 AT2G22980 50.000 76 37 1 169 243 1 76 6.62e-18 81.3
MsG0480018984.01.T02 AT1G15000 33.537 164 90 5 77 236 31 179 1.05e-17 82.0
MsG0480018984.01.T02 AT1G73280 50.685 73 35 1 172 243 1 73 5.27e-15 73.6
MsG0480018984.01.T02 AT5G23210 33.043 115 70 3 129 240 8 118 4.78e-12 65.5
MsG0480018984.01.T02 AT5G23210 32.456 114 70 3 130 240 8 117 2.44e-11 63.2
MsG0480018984.01.T02 AT5G23210 32.456 114 70 3 130 240 8 117 2.70e-11 63.2
MsG0480018984.01.T01 AT2G22970 51.775 338 153 5 32 360 17 353 1.57e-112 334
MsG0480018984.01.T01 AT2G22920 51.603 343 154 6 29 360 14 355 2.93e-112 333
MsG0480018984.01.T01 AT2G22970 51.622 339 154 5 31 360 16 353 3.78e-112 334
MsG0480018984.01.T01 AT2G22920 51.603 343 154 6 29 360 14 355 5.23e-112 333
MsG0480018984.01.T01 AT2G22970 51.622 339 154 5 31 360 16 353 5.66e-112 333
MsG0480018984.01.T01 AT2G23010 48.889 360 162 8 18 360 3 357 2.59e-109 327
MsG0480018984.01.T01 AT2G23010 48.889 360 162 8 18 360 3 357 2.59e-109 327
MsG0480018984.01.T01 AT2G22980 49.708 342 154 8 31 361 17 351 1.64e-107 321
MsG0480018984.01.T01 AT2G22980 49.708 342 154 8 31 361 17 351 3.77e-107 321
MsG0480018984.01.T01 AT2G22980 49.853 341 153 8 31 360 17 350 3.79e-107 321
MsG0480018984.01.T01 AT5G09640 46.296 378 158 8 24 360 11 384 7.60e-107 321
MsG0480018984.01.T01 AT2G22980 49.419 344 154 9 31 361 17 353 8.79e-107 317
MsG0480018984.01.T01 AT2G22990 48.529 340 163 6 32 360 15 353 1.59e-106 319
MsG0480018984.01.T01 AT2G22990 48.529 340 163 6 32 360 15 353 2.16e-106 320
MsG0480018984.01.T01 AT2G22990 48.529 340 163 6 32 360 15 353 2.53e-106 319
MsG0480018984.01.T01 AT3G12240 49.254 335 156 8 36 359 24 355 3.27e-106 318
MsG0480018984.01.T01 AT3G10450 50.000 334 157 6 36 360 25 357 6.75e-106 317
MsG0480018984.01.T01 AT1G33540 47.425 369 149 9 32 360 21 384 2.07e-105 318
MsG0480018984.01.T01 AT3G10450 50.000 334 157 6 36 360 25 357 2.79e-105 316
MsG0480018984.01.T01 AT1G73290 50.893 336 156 8 32 360 25 358 4.54e-105 315
MsG0480018984.01.T01 AT1G73270 50.725 345 146 9 32 360 25 361 7.92e-105 315
MsG0480018984.01.T01 AT1G73290 50.893 336 156 8 32 360 25 358 9.79e-105 315
MsG0480018984.01.T01 AT1G73270 50.725 345 146 9 32 360 25 361 1.18e-104 315
MsG0480018984.01.T01 AT1G73280 48.538 342 160 7 32 361 25 362 7.66e-104 311
MsG0480018984.01.T01 AT1G73310 49.415 342 154 8 32 360 26 361 1.55e-103 311
MsG0480018984.01.T01 AT1G73310 49.415 342 154 8 32 360 26 361 1.74e-103 312
MsG0480018984.01.T01 AT3G12203 48.045 358 169 8 14 360 6 357 3.78e-103 311
MsG0480018984.01.T01 AT3G12203 49.405 336 155 7 36 360 5 336 8.31e-103 309
MsG0480018984.01.T01 AT2G23000 45.856 362 145 7 30 360 16 357 9.50e-103 310
MsG0480018984.01.T01 AT2G23000 45.856 362 145 7 30 360 16 357 9.50e-103 310
MsG0480018984.01.T01 AT3G12230 48.657 335 158 8 36 359 23 354 1.36e-102 309
MsG0480018984.01.T01 AT1G73300 49.560 341 155 10 32 360 26 361 4.11e-102 308
MsG0480018984.01.T01 AT1G73300 49.560 341 155 10 32 360 26 361 4.11e-102 308
MsG0480018984.01.T01 AT1G73280 48.387 341 160 7 32 360 25 361 5.87e-102 308
MsG0480018984.01.T01 AT2G22990 47.353 340 158 7 32 360 15 344 6.64e-100 302
MsG0480018984.01.T01 AT3G12220 47.788 339 157 7 36 360 23 355 1.51e-99 301
MsG0480018984.01.T01 AT2G22970 51.505 299 137 4 31 322 16 313 2.77e-99 297
MsG0480018984.01.T01 AT2G22920 51.987 302 136 5 29 322 14 314 1.02e-98 295
MsG0480018984.01.T01 AT5G36180 48.680 341 158 10 32 360 26 361 1.10e-98 300
MsG0480018984.01.T01 AT3G12220 47.256 328 123 6 36 360 23 303 5.20e-95 288
MsG0480018984.01.T01 AT1G33540 46.647 343 138 9 58 360 4 341 1.27e-94 288
MsG0480018984.01.T01 AT3G10450 48.077 312 152 6 58 360 4 314 4.21e-93 283
MsG0480018984.01.T01 AT3G10450 48.077 312 152 6 58 360 4 314 1.33e-92 282
MsG0480018984.01.T01 AT3G12220 46.057 317 151 7 58 360 15 325 1.37e-86 267
MsG0480018984.01.T01 AT1G73290 55.319 235 101 4 32 264 25 257 6.91e-85 259
MsG0480018984.01.T01 AT3G12203 46.689 302 147 6 70 360 1 299 8.45e-84 259
MsG0480018984.01.T01 AT4G12910 34.848 396 191 13 29 360 24 416 5.13e-67 218
MsG0480018984.01.T01 AT4G12910 34.848 396 191 13 29 360 24 416 1.66e-66 218
MsG0480018984.01.T01 AT3G25420 33.981 412 202 12 16 360 5 413 2.80e-65 215
MsG0480018984.01.T01 AT1G73310 44.656 262 128 6 112 360 2 259 1.54e-61 200
MsG0480018984.01.T01 AT1G73280 44.747 257 127 6 116 360 6 259 2.49e-60 197
MsG0480018984.01.T01 AT5G36180 45.038 262 129 8 111 360 1 259 5.12e-60 196
MsG0480018984.01.T01 AT5G36180 45.038 262 129 8 111 360 1 259 1.24e-59 196
MsG0480018984.01.T01 AT5G36180 45.038 262 129 8 111 360 1 259 1.24e-59 196
MsG0480018984.01.T01 AT5G36180 45.038 262 129 8 111 360 1 259 1.41e-59 196
MsG0480018984.01.T01 AT2G22990 44.351 239 122 5 133 360 1 239 4.17e-59 194
MsG0480018984.01.T01 AT2G22990 44.351 239 122 5 133 360 1 239 5.74e-59 193
MsG0480018984.01.T01 AT2G22980 43.515 239 118 7 133 360 1 233 1.78e-54 181
MsG0480018984.01.T01 AT1G73280 43.038 237 120 6 136 360 1 234 6.68e-51 172
MsG0480018984.01.T01 AT2G22920 44.828 174 86 4 197 360 3 176 2.35e-36 132
MsG0480018984.01.T01 AT5G23210 32.364 275 160 10 23 292 37 290 3.40e-33 129
MsG0480018984.01.T01 AT3G52020 30.671 313 168 12 40 322 80 373 3.89e-33 129
MsG0480018984.01.T01 AT5G23210 32.364 275 160 10 23 292 37 290 7.05e-33 128
MsG0480018984.01.T01 AT2G35770 28.169 355 204 12 14 334 8 345 5.52e-31 122
MsG0480018984.01.T01 AT4G15100 29.781 366 202 15 40 360 45 400 6.78e-31 122
MsG0480018984.01.T01 AT5G08260 34.632 231 136 8 33 254 29 253 8.58e-31 122
MsG0480018984.01.T01 AT5G22980 37.766 188 108 5 69 254 112 292 5.19e-30 120
MsG0480018984.01.T01 AT3G45010 37.017 181 105 4 69 247 115 288 7.54e-30 120
MsG0480018984.01.T01 AT1G61130 32.911 237 146 7 24 254 16 245 1.51e-28 115
MsG0480018984.01.T01 AT1G28110 32.159 227 139 7 39 261 31 246 1.82e-28 115
MsG0480018984.01.T01 AT1G28110 32.159 227 139 7 39 261 31 246 1.82e-28 115
MsG0480018984.01.T01 AT2G33530 33.617 235 141 9 31 261 25 248 1.94e-28 115
MsG0480018984.01.T01 AT1G43780 32.500 240 145 9 40 273 38 266 2.37e-28 115
MsG0480018984.01.T01 AT3G52000 26.857 350 211 13 40 360 64 397 3.46e-28 115
MsG0480018984.01.T01 AT2G35780 33.476 233 139 8 34 260 24 246 4.71e-28 114
MsG0480018984.01.T01 AT3G56540 38.217 157 88 5 40 194 80 229 6.05e-28 110
MsG0480018984.01.T01 AT4G30810 30.522 249 158 8 15 254 8 250 8.86e-28 114
MsG0480018984.01.T01 AT3G10410 36.649 191 110 6 70 257 114 296 9.64e-28 114
MsG0480018984.01.T01 AT4G30610 32.301 226 141 8 34 254 27 245 1.04e-27 113
MsG0480018984.01.T01 AT3G07990 32.766 235 137 9 39 260 33 259 1.04e-27 113
MsG0480018984.01.T01 AT3G02110 31.621 253 160 10 34 282 32 275 2.28e-27 112
MsG0480018984.01.T01 AT3G17180 33.913 230 133 12 32 251 30 250 3.42e-27 111
MsG0480018984.01.T01 AT3G17180 33.913 230 133 12 32 251 30 250 1.01e-26 110
MsG0480018984.01.T01 AT3G52010 29.572 257 161 8 23 271 46 290 1.73e-26 110
MsG0480018984.01.T01 AT1G11080 28.358 335 188 13 40 331 51 376 2.09e-25 107
MsG0480018984.01.T01 AT2G24000 31.982 222 141 6 34 251 25 240 2.41e-25 107
MsG0480018984.01.T01 AT1G11080 28.358 335 188 13 40 331 51 376 2.48e-25 107
MsG0480018984.01.T01 AT2G12480 31.301 246 138 8 40 263 32 268 8.28e-25 105
MsG0480018984.01.T01 AT2G12480 31.301 246 138 8 40 263 32 268 8.85e-25 105
MsG0480018984.01.T01 AT2G12480 31.301 246 138 8 40 263 32 268 9.10e-25 105
MsG0480018984.01.T01 AT2G12480 31.301 246 138 8 40 263 32 268 1.30e-24 104
MsG0480018984.01.T01 AT5G42230 33.014 209 128 6 40 243 29 230 4.90e-24 103
MsG0480018984.01.T01 AT5G42230 33.014 209 128 6 40 243 29 230 4.90e-24 103
MsG0480018984.01.T01 AT5G42240 29.412 255 155 9 40 287 33 269 5.38e-24 103
MsG0480018984.01.T01 AT2G24010 31.818 220 138 8 40 254 31 243 8.90e-24 102
MsG0480018984.01.T01 AT2G05850 26.496 351 216 14 40 360 64 402 4.54e-23 100
MsG0480018984.01.T01 AT5G22960 34.545 165 81 4 56 219 36 174 6.02e-23 95.1
MsG0480018984.01.T01 AT3G63470 31.937 191 116 7 40 227 82 261 6.25e-23 100
MsG0480018984.01.T01 AT2G24010 25.137 366 220 14 40 361 2 357 6.55e-20 90.1
MsG0480018984.01.T01 AT1G15000 26.686 341 200 13 41 361 31 341 1.03e-19 90.5
MsG0480018984.01.T01 AT2G24010 29.362 235 139 9 40 254 31 258 3.15e-19 89.0
MsG0480018984.01.T01 AT5G23210 30.244 205 121 7 93 292 8 195 1.95e-18 86.3
MsG0480018984.01.T01 AT5G23210 29.902 204 121 7 94 292 8 194 5.73e-18 84.7
MsG0480018984.01.T01 AT5G23210 29.902 204 121 7 94 292 8 194 1.02e-17 84.3
MsG0480018984.01.T01 AT2G24010 30.049 203 116 8 40 223 2 197 1.77e-16 80.9
MsG0480018984.01.T01 AT2G22960 51.613 62 28 2 301 360 43 104 2.06e-11 62.8

Find 53 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTATTGTTGTAGATTTA+TGG 0.065670 4:+12865038 MsG0480018984.01.T01:intron
TAAAAGTGTCAGAAAGTATT+TGG 0.182205 4:+12861958 MsG0480018984.01.T01:five_prime_UTR
AATTACTTTGCAACTTAATT+CGG 0.231942 4:-12864951 None:intergenic
AATTCATTTGAAAGAAATTC+AGG 0.250211 4:-12863764 None:intergenic
GTTACTACCTCGTAACTAAA+TGG 0.260271 4:+12865060 MsG0480018984.01.T01:CDS
AGTCCCATTCCATGAGTATA+TGG 0.262864 4:-12864417 None:intergenic
AATTAATGAGTACAACATTT+TGG 0.262883 4:+12864841 MsG0480018984.01.T01:CDS
TGCAGGGAACCATAGGAAAA+TGG 0.263551 4:+12865273 MsG0480018984.01.T01:intron
ATTACTTTGCAACTTAATTC+GGG 0.296588 4:-12864950 None:intergenic
TTAACTCATATTGAAGCTTC+TGG 0.297794 4:+12862079 MsG0480018984.01.T01:CDS
TCAAGGGTTGAACACCTTCC+TGG 0.310797 4:+12862103 MsG0480018984.01.T01:CDS
TTTGTGTGTGTGTTGTTATA+GGG 0.334881 4:-12864380 None:intergenic
TGATCAACAGGAAATGAAAA+AGG 0.351849 4:+12864237 MsG0480018984.01.T01:intron
AAATGAAATTTCTTGAAGAA+TGG 0.362725 4:-12863828 None:intergenic
CTTTCAAATGAATTCTACTT+TGG 0.363271 4:+12863773 MsG0480018984.01.T01:CDS
TGTCAGATGCTACTAGCATT+TGG 0.363901 4:+12862037 MsG0480018984.01.T01:CDS
ATTCTTCAAGAAATTTCATT+TGG 0.387618 4:+12863830 MsG0480018984.01.T01:CDS
AATGAAATTTCTTGAAGAAT+GGG 0.406950 4:-12863827 None:intergenic
TGAAGTGAATTATGAGAAGA+AGG 0.418918 4:-12862007 None:intergenic
TCTTGAAGAATGGGTGGGAC+AGG 0.449434 4:-12863818 None:intergenic
GACCCAGTTTCAAGTTCAAA+AGG 0.450820 4:-12862142 None:intergenic
GTGGAGGAGATCTTTGACTC+AGG 0.463346 4:+12864892 MsG0480018984.01.T01:CDS
GATACCGCTCTTTGATATAC+AGG 0.469317 4:+12865372 MsG0480018984.01.T01:CDS
GCAGGGAACCATAGGAAAAT+GGG 0.470034 4:+12865274 MsG0480018984.01.T01:intron
ATTCATTTGAAAGAAATTCA+GGG 0.472682 4:-12863763 None:intergenic
CCTTGAGATTTATCAATGGC+TGG 0.473414 4:-12864263 None:intergenic
ATCCCATATACTCATGGAAT+GGG 0.476759 4:+12864414 MsG0480018984.01.T01:CDS
TTTGGAGCTGATTCATACTC+TGG 0.486671 4:+12863791 MsG0480018984.01.T01:CDS
ATATTGAAGCTTCTGGCTCA+AGG 0.493319 4:+12862086 MsG0480018984.01.T01:CDS
TATCAAATCCCATATACTCA+TGG 0.506725 4:+12864408 MsG0480018984.01.T01:CDS
CGCTAATCCATTTAGTTACG+AGG 0.524518 4:-12865067 None:intergenic
GTCCCATTCCATGAGTATAT+GGG 0.524961 4:-12864416 None:intergenic
GAAATTTCTTGAAGAATGGG+TGG 0.530695 4:-12863824 None:intergenic
GGAACCTTGAGATTTATCAA+TGG 0.533844 4:-12864267 None:intergenic
TGACCCCTGCAGGGAACCAT+AGG 0.540554 4:+12865266 MsG0480018984.01.T01:intron
GTTTCAAGTTCAAAAGGAAG+AGG 0.558336 4:-12862136 None:intergenic
TATTGAAGCTTCTGGCTCAA+GGG 0.558482 4:+12862087 MsG0480018984.01.T01:CDS
AATCCCATATACTCATGGAA+TGG 0.559580 4:+12864413 MsG0480018984.01.T01:CDS
GGAAGAGGTCCTTGAAAACC+AGG 0.576454 4:-12862121 None:intergenic
TTACTTTGCAACTTAATTCG+GGG 0.591199 4:-12864949 None:intergenic
CAAGGCACTGCATATTCGAG+AGG 0.592389 4:+12865103 MsG0480018984.01.T01:CDS
AAATTTCTTGAAGAATGGGT+GGG 0.592471 4:-12863823 None:intergenic
CCAGCCATTGATAAATCTCA+AGG 0.594635 4:+12864263 MsG0480018984.01.T01:CDS
TAGCGATGAGAGTGTTCGCA+AGG 0.621251 4:+12865085 MsG0480018984.01.T01:CDS
CTTGTTGATGATAAGAACGT+GGG 0.631221 4:-12861930 None:intergenic
GTGAAGATGATGAGCATCTG+TGG 0.632870 4:+12864873 MsG0480018984.01.T01:CDS
GCTTGCAAAGATGAACATGT+TGG 0.674130 4:+12861982 MsG0480018984.01.T01:exon
TTCACCTGTATATCAAAGAG+CGG 0.675900 4:-12865376 None:intergenic
TCTCCTGCTCAAAATCAGCA+CGG 0.684344 4:-12865307 None:intergenic
GAGGTCCTTGAAAACCAGGA+AGG 0.692941 4:-12862117 None:intergenic
TCTTGTTGATGATAAGAACG+TGG 0.695911 4:-12861931 None:intergenic
CATTTCTGATGAACTCTATG+CGG 0.703705 4:+12864440 MsG0480018984.01.T01:CDS
AAGATGATGAGCATCTGTGG+AGG 0.709068 4:+12864876 MsG0480018984.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATATATACAAATATAAAA+AGG - Chr4:12863010-12863029 None:intergenic 10.0%
!! TACAATCTTAAAATTTAAAT+TGG - Chr4:12862519-12862538 None:intergenic 10.0%
!! TTATAATTATAATTACAATG+AGG + Chr4:12864026-12864045 MsG0480018984.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTTTTTGG+TGG + Chr4:12863894-12863913 MsG0480018984.01.T01:intron 10.0%
!! AAAACAATAAAGTTGTAATT+TGG - Chr4:12862421-12862440 None:intergenic 15.0%
!! AGTTATACTTTAGATAAAAT+TGG - Chr4:12864679-12864698 None:intergenic 15.0%
!! ATGCAAATAATCAATTTATT+TGG - Chr4:12864087-12864106 None:intergenic 15.0%
!! GTTTGTTTAATATTTACTTT+AGG + Chr4:12863641-12863660 MsG0480018984.01.T01:intron 15.0%
!! TAAAGTATAACTATTATAAG+AGG + Chr4:12864687-12864706 MsG0480018984.01.T01:intron 15.0%
!! TGCAAATAATCAATTTATTT+GGG - Chr4:12864086-12864105 None:intergenic 15.0%
!!! ATATGATAATGAGTTTATAA+GGG + Chr4:12862609-12862628 MsG0480018984.01.T01:intron 15.0%
!!! ATATTTTTTTACTCTACAAA+CGG + Chr4:12862636-12862655 MsG0480018984.01.T01:intron 15.0%
!! AAATGAAATTTCTTGAAGAA+TGG - Chr4:12863831-12863850 None:intergenic 20.0%
!! AATATCAGAAATAACACAAA+AGG - Chr4:12862813-12862832 None:intergenic 20.0%
!! AATGAAATTTCTTGAAGAAT+GGG - Chr4:12863830-12863849 None:intergenic 20.0%
!! AATTACTTTGCAACTTAATT+CGG - Chr4:12864954-12864973 None:intergenic 20.0%
!! AATTCATTTGAAAGAAATTC+AGG - Chr4:12863767-12863786 None:intergenic 20.0%
!! ACAAATGGAAAAATATCAAT+CGG - Chr4:12864216-12864235 None:intergenic 20.0%
!! AGCTTTACTAAAGAATAATA+AGG - Chr4:12864475-12864494 None:intergenic 20.0%
!! ATTCATTTGAAAGAAATTCA+GGG - Chr4:12863766-12863785 None:intergenic 20.0%
!! ATTCTTCAAGAAATTTCATT+TGG + Chr4:12863830-12863849 MsG0480018984.01.T01:CDS 20.0%
!! CATTTATTGTTGTAGATTTA+TGG + Chr4:12865038-12865057 MsG0480018984.01.T01:intron 20.0%
!! GAAAAGAAACATAAAAAGAA+CGG - Chr4:12863276-12863295 None:intergenic 20.0%
!! GGTGAAAATGAAATAAAATA+TGG - Chr4:12862184-12862203 None:intergenic 20.0%
!! TACTTTAGATAAAATTGGAA+TGG - Chr4:12864674-12864693 None:intergenic 20.0%
!! TTGTGTGTTCATATATATTT+AGG + Chr4:12862240-12862259 MsG0480018984.01.T01:intron 20.0%
!!! AAATCAGTGTTGAATTATTA+AGG - Chr4:12863177-12863196 None:intergenic 20.0%
!!! AATTAATGAGTACAACATTT+TGG + Chr4:12864841-12864860 MsG0480018984.01.T01:CDS 20.0%
!!! AATTATCTGTTTTTGTATAG+TGG + Chr4:12863729-12863748 MsG0480018984.01.T01:intron 20.0%
!!! ACATCAAATTTGAAACATTA+TGG - Chr4:12865014-12865033 None:intergenic 20.0%
!!! AGAAATTTGTTAGATAGAAA+GGG - Chr4:12864783-12864802 None:intergenic 20.0%
!!! AGACTTAATTATTTTCATGA+TGG + Chr4:12863543-12863562 MsG0480018984.01.T01:intron 20.0%
!!! ATGGATTAATCTTTAAGTAA+TGG + Chr4:12863994-12864013 MsG0480018984.01.T01:intron 20.0%
!!! GATATGATAATGAGTTTATA+AGG + Chr4:12862608-12862627 MsG0480018984.01.T01:intron 20.0%
!!! GTTCTTATTAGAACAAATTT+TGG - Chr4:12863216-12863235 None:intergenic 20.0%
!!! TAGAAATTTGTTAGATAGAA+AGG - Chr4:12864784-12864803 None:intergenic 20.0%
!!! TTTTGTATTTCTTAGAACTT+AGG - Chr4:12862689-12862708 None:intergenic 20.0%
!!! TTTTTTTTTTTTTTTGGTGG+TGG + Chr4:12863897-12863916 MsG0480018984.01.T01:intron 20.0%
! AAGTACCTATTTGATAGAAA+AGG - Chr4:12862397-12862416 None:intergenic 25.0%
! AATAATTAAGTCTGAAGATG+TGG - Chr4:12863536-12863555 None:intergenic 25.0%
! ACTTGACGTAATAAGTTATA+GGG - Chr4:12865142-12865161 None:intergenic 25.0%
! AGTACCTATTTGATAGAAAA+GGG - Chr4:12862396-12862415 None:intergenic 25.0%
! ATAAAGTTCATTGTTTACGA+TGG + Chr4:12863864-12863883 MsG0480018984.01.T01:intron 25.0%
! ATCAGAAGAAAATGTTCAAT+TGG + Chr4:12863052-12863071 MsG0480018984.01.T01:intron 25.0%
! ATGTTCAATTGGATGTTAAT+AGG + Chr4:12863063-12863082 MsG0480018984.01.T01:intron 25.0%
! ATTACTTTGCAACTTAATTC+GGG - Chr4:12864953-12864972 None:intergenic 25.0%
! CTTTCAAATGAATTCTACTT+TGG + Chr4:12863773-12863792 MsG0480018984.01.T01:CDS 25.0%
! TAATCCATAATTGACTATGT+AGG + Chr4:12862466-12862485 MsG0480018984.01.T01:intron 25.0%
! TACTATTAAGAGGTTTAGTT+TGG + Chr4:12862753-12862772 MsG0480018984.01.T01:intron 25.0%
! TATCATATTAAGTGCTTCTT+TGG - Chr4:12862721-12862740 None:intergenic 25.0%
! TATTTCTTAGAACTTAGGTT+GGG - Chr4:12862684-12862703 None:intergenic 25.0%
! TCATATATATTTAGGTACGT+GGG + Chr4:12862248-12862267 MsG0480018984.01.T01:intron 25.0%
! TCGTAAACAATGAACTTTAT+AGG - Chr4:12863864-12863883 None:intergenic 25.0%
! TCTTAAAAGAAGATCATAGT+TGG - Chr4:12863572-12863591 None:intergenic 25.0%
! TGTACTTTCTTACTATTAAG+AGG + Chr4:12862743-12862762 MsG0480018984.01.T01:intron 25.0%
! TTCATATATATTTAGGTACG+TGG + Chr4:12862247-12862266 MsG0480018984.01.T01:intron 25.0%
!! AGTAATGCTAATGATCTTTT+GGG + Chr4:12863328-12863347 MsG0480018984.01.T01:intron 25.0%
!! ATGATGTGTTTTATGCTTAA+TGG + Chr4:12864528-12864547 MsG0480018984.01.T01:intron 25.0%
!! CTTAATTATTTTCATGATGG+AGG + Chr4:12863546-12863565 MsG0480018984.01.T01:intron 25.0%
!! TAGTAATGCTAATGATCTTT+TGG + Chr4:12863327-12863346 MsG0480018984.01.T01:intron 25.0%
!! TTGCACAATCAAAAGTTTTA+AGG - Chr4:12862920-12862939 None:intergenic 25.0%
!!! ACACAAAAGGAGTATTAAAA+AGG - Chr4:12862800-12862819 None:intergenic 25.0%
!!! ATTTTTAAGTCTTTACGTTC+TGG - Chr4:12864192-12864211 None:intergenic 25.0%
!!! TAAAAGTGTCAGAAAGTATT+TGG + Chr4:12861958-12861977 MsG0480018984.01.T01:five_prime_UTR 25.0%
AAATTTCTTGAAGAATGGGT+GGG - Chr4:12863826-12863845 None:intergenic 30.0%
AACTATTTAGACAGAGATGA+TGG - Chr4:12864296-12864315 None:intergenic 30.0%
AAGATCATTAGCATTACTAC+CGG - Chr4:12863326-12863345 None:intergenic 30.0%
AATCAATTTATTTGGGTGAG+AGG - Chr4:12864079-12864098 None:intergenic 30.0%
AGAAGTCTCATAAACAACTA+TGG + Chr4:12865213-12865232 MsG0480018984.01.T01:intron 30.0%
AGGTGAAATAGTTTCAATGA+AGG - Chr4:12864751-12864770 None:intergenic 30.0%
ATCAATTTATTTGGGTGAGA+GGG - Chr4:12864078-12864097 None:intergenic 30.0%
CACTTGACGTAATAAGTTAT+AGG - Chr4:12865143-12865162 None:intergenic 30.0%
CATATATATTTAGGTACGTG+GGG + Chr4:12862249-12862268 MsG0480018984.01.T01:intron 30.0%
CATGCAAATCTAAGCAAAAA+AGG + Chr4:12865350-12865369 MsG0480018984.01.T01:CDS 30.0%
CTATAACTTATTACGTCAAG+TGG + Chr4:12865141-12865160 MsG0480018984.01.T01:intron 30.0%
CTCATATGCAAAAAATGTCA+CGG + Chr4:12863398-12863417 MsG0480018984.01.T01:CDS 30.0%
GATAGAAAGGGAAAAATAGT+AGG - Chr4:12864771-12864790 None:intergenic 30.0%
GTATGTTCATTATGCTAACT+AGG + Chr4:12863474-12863493 MsG0480018984.01.T01:intron 30.0%
GTATTTCTTAGAACTTAGGT+TGG - Chr4:12862685-12862704 None:intergenic 30.0%
TATCAAATCCCATATACTCA+TGG + Chr4:12864408-12864427 MsG0480018984.01.T01:CDS 30.0%
TGAAGTGAATTATGAGAAGA+AGG - Chr4:12862010-12862029 None:intergenic 30.0%
TGATCAACAGGAAATGAAAA+AGG + Chr4:12864237-12864256 MsG0480018984.01.T01:intron 30.0%
TTAACTCATATTGAAGCTTC+TGG + Chr4:12862079-12862098 MsG0480018984.01.T01:CDS 30.0%
TTACTTTGCAACTTAATTCG+GGG - Chr4:12864952-12864971 None:intergenic 30.0%
TTTAAGAACCGATCATGTTA+CGG + Chr4:12863585-12863604 MsG0480018984.01.T01:intron 30.0%
TTTATATCAGTCATGTCATG+TGG + Chr4:12863240-12863259 MsG0480018984.01.T01:intron 30.0%
TTTCAACGCTTATCTTGATT+CGG + Chr4:12864975-12864994 MsG0480018984.01.T01:intron 30.0%
TTTCCATTTGTTTGATCAAC+AGG + Chr4:12864225-12864244 MsG0480018984.01.T01:intron 30.0%
TTTCCTGTTGATCAAACAAA+TGG - Chr4:12864231-12864250 None:intergenic 30.0%
! ATTTTTGTAGATTTGCCACT+TGG + Chr4:12863366-12863385 MsG0480018984.01.T01:CDS 30.0%
! GAAAAGTGTGACAATGAATA+TGG - Chr4:12863614-12863633 None:intergenic 30.0%
! TCTTTACGTTCTGGTTATTA+GGG - Chr4:12864183-12864202 None:intergenic 30.0%
! TTCCTTTTGAACTTGAAACT+GGG + Chr4:12862140-12862159 MsG0480018984.01.T01:CDS 30.0%
! TTGAAATCAAGGAGTACAAT+GGG + Chr4:12863097-12863116 MsG0480018984.01.T01:CDS 30.0%
! TTTGAAATCAAGGAGTACAA+TGG + Chr4:12863096-12863115 MsG0480018984.01.T01:CDS 30.0%
! TTTGTGTGTGTGTTGTTATA+GGG - Chr4:12864383-12864402 None:intergenic 30.0%
!! ATTCGTTTTGAGTCATAGTT+AGG - Chr4:12863677-12863696 None:intergenic 30.0%
!! TTTTGTGTGTGTGTTGTTAT+AGG - Chr4:12864384-12864403 None:intergenic 30.0%
AAAAAGACCCTCTTATGCTT+TGG + Chr4:12862336-12862355 MsG0480018984.01.T01:CDS 35.0%
AATCCCATATACTCATGGAA+TGG + Chr4:12864413-12864432 MsG0480018984.01.T01:CDS 35.0%
ACACATCATCATTGTAACCT+AGG - Chr4:12864517-12864536 None:intergenic 35.0%
ACATACATTGTACTTTCCCT+AGG + Chr4:12864497-12864516 MsG0480018984.01.T01:intron 35.0%
ACCATACTCATCAATTTCTG+AGG + Chr4:12863448-12863467 MsG0480018984.01.T01:CDS 35.0%
ATCCCATATACTCATGGAAT+GGG + Chr4:12864414-12864433 MsG0480018984.01.T01:CDS 35.0%
ATCCCTGAAAATGTTCAAGT+CGG - Chr4:12864347-12864366 None:intergenic 35.0%
ATTATCCGAAGGTGATTTAC+CGG + Chr4:12863304-12863323 MsG0480018984.01.T01:intron 35.0%
CAATTGGATGTTAATAGGTC+CGG + Chr4:12863068-12863087 MsG0480018984.01.T01:intron 35.0%
CACATCATCATTGTAACCTA+GGG - Chr4:12864516-12864535 None:intergenic 35.0%
CAGAAAAAGAAGAACAACCA+GGG - Chr4:12862373-12862392 None:intergenic 35.0%
CAGATAACCAAAGCATAAGA+GGG - Chr4:12862346-12862365 None:intergenic 35.0%
CATAATATATGCAACATCCG+AGG - Chr4:12863935-12863954 None:intergenic 35.0%
CATTTCTGATGAACTCTATG+CGG + Chr4:12864440-12864459 MsG0480018984.01.T01:CDS 35.0%
GAAATTTCTTGAAGAATGGG+TGG - Chr4:12863827-12863846 None:intergenic 35.0%
GGAACCTTGAGATTTATCAA+TGG - Chr4:12864270-12864289 None:intergenic 35.0%
GTTACTACCTCGTAACTAAA+TGG + Chr4:12865060-12865079 MsG0480018984.01.T01:CDS 35.0%
TAATTTGACACATACGTGTG+TGG - Chr4:12862493-12862512 None:intergenic 35.0%
TCCTCAGAAATTGATGAGTA+TGG - Chr4:12863452-12863471 None:intergenic 35.0%
TCCTTGATTTCAAATGCAAC+CGG - Chr4:12863090-12863109 None:intergenic 35.0%
TCTTAAACACAGCTCATTTC+TGG - Chr4:12864621-12864640 None:intergenic 35.0%
TGGTCCTACATAGTCAATTA+TGG - Chr4:12862473-12862492 None:intergenic 35.0%
TTCCTGATTTCATTATCCGA+AGG + Chr4:12863293-12863312 MsG0480018984.01.T01:intron 35.0%
! ATTTTCACCTCCTGTTAATG+GGG + Chr4:12862195-12862214 MsG0480018984.01.T01:intron 35.0%
! CATTTTCACCTCCTGTTAAT+GGG + Chr4:12862194-12862213 MsG0480018984.01.T01:intron 35.0%
! CTTCCTTTTGAACTTGAAAC+TGG + Chr4:12862139-12862158 MsG0480018984.01.T01:CDS 35.0%
! CTTTACGTTCTGGTTATTAG+GGG - Chr4:12864182-12864201 None:intergenic 35.0%
! GTCTTTACGTTCTGGTTATT+AGG - Chr4:12864184-12864203 None:intergenic 35.0%
! TACTCATCAATTTCTGAGGA+AGG + Chr4:12863452-12863471 MsG0480018984.01.T01:CDS 35.0%
! TCATTTTCACCTCCTGTTAA+TGG + Chr4:12862193-12862212 MsG0480018984.01.T01:intron 35.0%
! TCTGCCCTTTTCTATCAAAT+AGG + Chr4:12862389-12862408 MsG0480018984.01.T01:CDS 35.0%
! TTTAGACAGAGATGATGGTT+TGG - Chr4:12864291-12864310 None:intergenic 35.0%
!! ACTCTACAAACGGATTTTGT+AGG + Chr4:12862646-12862665 MsG0480018984.01.T01:intron 35.0%
!! ATTTTCAGGGATATCTGCTA+GGG + Chr4:12864355-12864374 MsG0480018984.01.T01:intron 35.0%
!! CTTGTTGATGATAAGAACGT+GGG - Chr4:12861933-12861952 None:intergenic 35.0%
!! GTTTCAAGTTCAAAAGGAAG+AGG - Chr4:12862139-12862158 None:intergenic 35.0%
!! TAGTCTAAGCTGACTTGATT+CGG + Chr4:12864138-12864157 MsG0480018984.01.T01:intron 35.0%
!! TCTTGTTGATGATAAGAACG+TGG - Chr4:12861934-12861953 None:intergenic 35.0%
!!! AACCGACTTGAACATTTTCA+GGG + Chr4:12864342-12864361 MsG0480018984.01.T01:intron 35.0%
!!! ATCTGTTTTTGTATAGTGGC+TGG + Chr4:12863733-12863752 MsG0480018984.01.T01:intron 35.0%
!!! TTTTTTTTTTTGGTGGTGGC+CGG + Chr4:12863901-12863920 MsG0480018984.01.T01:intron 35.0%
AGATCTTCAGTCCTTTGATG+AGG + Chr4:12864640-12864659 MsG0480018984.01.T01:intron 40.0%
AGTCCCATTCCATGAGTATA+TGG - Chr4:12864420-12864439 None:intergenic 40.0%
ATATTTAGGTACGTGGGGTT+AGG + Chr4:12862254-12862273 MsG0480018984.01.T01:intron 40.0%
CAAAAAATGTCACGGATCAC+CGG + Chr4:12863406-12863425 MsG0480018984.01.T01:CDS 40.0%
CACCTTCGGATAATGAAATC+AGG - Chr4:12863298-12863317 None:intergenic 40.0%
CCAGATAACCAAAGCATAAG+AGG - Chr4:12862347-12862366 None:intergenic 40.0%
CCAGCCATTGATAAATCTCA+AGG + Chr4:12864263-12864282 MsG0480018984.01.T01:CDS 40.0%
CCTCTTATGCTTTGGTTATC+TGG + Chr4:12862344-12862363 MsG0480018984.01.T01:CDS 40.0%
CCTTGAGATTTATCAATGGC+TGG - Chr4:12864266-12864285 None:intergenic 40.0%
CGCTAATCCATTTAGTTACG+AGG - Chr4:12865070-12865089 None:intergenic 40.0%
CTTATGCTTTGGTTATCTGG+TGG + Chr4:12862347-12862366 MsG0480018984.01.T01:CDS 40.0%
CTTGCTTTGCTTACTGTCAT+TGG - Chr4:12864113-12864132 None:intergenic 40.0%
GATACCGCTCTTTGATATAC+AGG + Chr4:12865372-12865391 MsG0480018984.01.T01:CDS 40.0%
GCAGAAAAAGAAGAACAACC+AGG - Chr4:12862374-12862393 None:intergenic 40.0%
GCTTGCAAAGATGAACATGT+TGG + Chr4:12861982-12862001 MsG0480018984.01.T01:exon 40.0%
GTCCCATTCCATGAGTATAT+GGG - Chr4:12864419-12864438 None:intergenic 40.0%
TACTACCGGTAAATCACCTT+CGG - Chr4:12863312-12863331 None:intergenic 40.0%
TATGAGAAACCAGTTCCAAG+TGG - Chr4:12863384-12863403 None:intergenic 40.0%
TATGGCAACCGTAACATGAT+CGG - Chr4:12863596-12863615 None:intergenic 40.0%
TCACTGCAGAGAAACTGTAA+AGG + Chr4:12864575-12864594 MsG0480018984.01.T01:intron 40.0%
TGGTTTACTTGCCTCATCAA+AGG - Chr4:12864654-12864673 None:intergenic 40.0%
TGTCAGATGCTACTAGCATT+TGG + Chr4:12862037-12862056 MsG0480018984.01.T01:CDS 40.0%
! AGCATAAGAGGGTCTTTTTG+AGG - Chr4:12862335-12862354 None:intergenic 40.0%
! GAAAATGTTCAAGTCGGTTC+AGG - Chr4:12864341-12864360 None:intergenic 40.0%
! TCCGGTTGCATTTGAAATCA+AGG + Chr4:12863086-12863105 MsG0480018984.01.T01:CDS 40.0%
! TTTGGAGCTGATTCATACTC+TGG + Chr4:12863791-12863810 MsG0480018984.01.T01:CDS 40.0%
!! ATATTGAAGCTTCTGGCTCA+AGG + Chr4:12862086-12862105 MsG0480018984.01.T01:CDS 40.0%
!! CATTTTCAGGGATATCTGCT+AGG + Chr4:12864354-12864373 MsG0480018984.01.T01:intron 40.0%
!! GACCCAGTTTCAAGTTCAAA+AGG - Chr4:12862145-12862164 None:intergenic 40.0%
!! TATTGAAGCTTCTGGCTCAA+GGG + Chr4:12862087-12862106 MsG0480018984.01.T01:CDS 40.0%
!!! GAACCGACTTGAACATTTTC+AGG + Chr4:12864341-12864360 MsG0480018984.01.T01:intron 40.0%
!!! TTTTTTTTTTGGTGGTGGCC+GGG + Chr4:12863902-12863921 MsG0480018984.01.T01:intron 40.0%
AACACCTTTGTCCATGACTG+TGG - Chr4:12863147-12863166 None:intergenic 45.0%
AAGATGATGAGCATCTGTGG+AGG + Chr4:12864876-12864895 MsG0480018984.01.T01:CDS 45.0%
GCAGGGAACCATAGGAAAAT+GGG + Chr4:12865274-12865293 MsG0480018984.01.T01:intron 45.0%
GTGAAGATGATGAGCATCTG+TGG + Chr4:12864873-12864892 MsG0480018984.01.T01:CDS 45.0%
TCTCCTGCTCAAAATCAGCA+CGG - Chr4:12865310-12865329 None:intergenic 45.0%
TGCAGGGAACCATAGGAAAA+TGG + Chr4:12865273-12865292 MsG0480018984.01.T01:intron 45.0%
! ACATCGCTCCCATTTTCCTA+TGG - Chr4:12865285-12865304 None:intergenic 45.0%
! ACGTTCTGGTTATTAGGGGA+AGG - Chr4:12864178-12864197 None:intergenic 45.0%
! ATTTTCCTATGGTTCCCTGC+AGG - Chr4:12865274-12865293 None:intergenic 45.0%
! CGTTCTGGTTATTAGGGGAA+GGG - Chr4:12864177-12864196 None:intergenic 45.0%
! GTAGATTTGCCACTTGGAAC+TGG + Chr4:12863372-12863391 MsG0480018984.01.T01:CDS 45.0%
! GTTCTGGTTATTAGGGGAAG+GGG - Chr4:12864176-12864195 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - Chr4:12863964-12863983 None:intergenic 45.0%
! TTCTGGTTATTAGGGGAAGG+GGG - Chr4:12864175-12864194 None:intergenic 45.0%
! TTTTCCTATGGTTCCCTGCA+GGG - Chr4:12865273-12865292 None:intergenic 45.0%
!! GAACACCTTCCTGGTTTTCA+AGG + Chr4:12862112-12862131 MsG0480018984.01.T01:CDS 45.0%
!!! TTACCGTGCTGATTTTGAGC+AGG + Chr4:12865304-12865323 MsG0480018984.01.T01:CDS 45.0%
!!! TTTTTTTTTGGTGGTGGCCG+GGG + Chr4:12863903-12863922 MsG0480018984.01.T01:intron 45.0%
!!! AATTAAAATGATTAATTTTT+CGG - Chr4:12864052-12864071 None:intergenic 5.0%
!!! ATCTTTTTTTTTTTTTTTTT+TGG + Chr4:12863891-12863910 MsG0480018984.01.T01:intron 5.0%
AACATCCGAGGTTCAAACCC+CGG - Chr4:12863923-12863942 None:intergenic 50.0%
AAGGCCACAGTCATGGACAA+AGG + Chr4:12863140-12863159 MsG0480018984.01.T01:CDS 50.0%
CTACACTGCACCCCATTAAC+AGG - Chr4:12862208-12862227 None:intergenic 50.0%
GAGGGTGGTCGAACAAATCT+TGG - Chr4:12862553-12862572 None:intergenic 50.0%
GAGGTCCTTGAAAACCAGGA+AGG - Chr4:12862120-12862139 None:intergenic 50.0%
GGAAGAGGTCCTTGAAAACC+AGG - Chr4:12862124-12862143 None:intergenic 50.0%
GTGGAGGAGATCTTTGACTC+AGG + Chr4:12864892-12864911 MsG0480018984.01.T01:CDS 50.0%
TCAAGGGTTGAACACCTTCC+TGG + Chr4:12862103-12862122 MsG0480018984.01.T01:CDS 50.0%
TCTTGAAGAATGGGTGGGAC+AGG - Chr4:12863821-12863840 None:intergenic 50.0%
TTTCCTATGGTTCCCTGCAG+GGG - Chr4:12865272-12865291 None:intergenic 50.0%
! GAACTAGTTTCCAGTCGCTC+CGG - Chr4:12863428-12863447 None:intergenic 50.0%
! TGTGGCCTTGAGACCAAACT+GGG - Chr4:12863129-12863148 None:intergenic 50.0%
!! ACATAGCTTTGACCCCTGCA+GGG + Chr4:12865257-12865276 MsG0480018984.01.T01:intron 50.0%
!! CAAGGCACTGCATATTCGAG+AGG + Chr4:12865103-12865122 MsG0480018984.01.T01:CDS 50.0%
!! TACATAGCTTTGACCCCTGC+AGG + Chr4:12865256-12865275 MsG0480018984.01.T01:intron 50.0%
!! TAGCGATGAGAGTGTTCGCA+AGG + Chr4:12865085-12865104 MsG0480018984.01.T01:CDS 50.0%
CACTGCACCCCATTAACAGG+AGG - Chr4:12862205-12862224 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + Chr4:12863966-12863985 MsG0480018984.01.T01:intron 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - Chr4:12863969-12863988 None:intergenic 55.0%
CGTGGGGTTAGGAGAAAGAG+AGG + Chr4:12862265-12862284 MsG0480018984.01.T01:CDS 55.0%
CTAAGCTCACGAGGACTCGA+TGG + Chr4:12863975-12863994 MsG0480018984.01.T01:intron 55.0%
CTTTGGTTATCTGGTGGCCC+TGG + Chr4:12862353-12862372 MsG0480018984.01.T01:CDS 55.0%
GCATGCCCAGTTTGGTCTCA+AGG + Chr4:12863121-12863140 MsG0480018984.01.T01:CDS 55.0%
TGGTCTCAAGGCCACAGTCA+TGG + Chr4:12863133-12863152 MsG0480018984.01.T01:CDS 55.0%
! CAATGGGAGCATGCCCAGTT+TGG + Chr4:12863113-12863132 MsG0480018984.01.T01:CDS 55.0%
! CTGTGGCCTTGAGACCAAAC+TGG - Chr4:12863130-12863149 None:intergenic 55.0%
CCCTCTACCACTACTGGTCG+CGG + Chr4:12862568-12862587 MsG0480018984.01.T01:intron 60.0%
CCGCGACCAGTAGTGGTAGA+GGG - Chr4:12862571-12862590 None:intergenic 60.0%
CCTCTACCACTACTGGTCGC+GGG + Chr4:12862569-12862588 MsG0480018984.01.T01:intron 60.0%
CGACCACCCTCTACCACTAC+TGG + Chr4:12862562-12862581 MsG0480018984.01.T01:intron 60.0%
CGACCAGTAGTGGTAGAGGG+TGG - Chr4:12862568-12862587 None:intergenic 60.0%
TAACCACCCGCGACCAGTAG+TGG - Chr4:12862578-12862597 None:intergenic 60.0%
TGACCCCTGCAGGGAACCAT+AGG + Chr4:12865266-12865285 MsG0480018984.01.T01:intron 60.0%
CCCGCGACCAGTAGTGGTAG+AGG - Chr4:12862572-12862591 None:intergenic 65.0%
CTACCACTACTGGTCGCGGG+TGG + Chr4:12862572-12862591 MsG0480018984.01.T01:intron 65.0%
GGTGGCCGGGGTTTGAACCT+CGG + Chr4:12863915-12863934 MsG0480018984.01.T01:intron 65.0%
TCACGGATCACCGGAGCGAC+TGG + Chr4:12863415-12863434 MsG0480018984.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 12861884 12865397 12861884 ID=MsG0480018984.01;Name=MsG0480018984.01
Chr4 mRNA 12861896 12865397 12861896 ID=MsG0480018984.01.T01;Parent=MsG0480018984.01;Name=MsG0480018984.01.T01;_AED=0.49;_eAED=0.50;_QI=96|0.88|0.9|1|0.77|0.8|10|0|361
Chr4 exon 12861896 12862161 12861896 ID=MsG0480018984.01.T01:exon:8038;Parent=MsG0480018984.01.T01
Chr4 exon 12863749 12863851 12863749 ID=MsG0480018984.01.T01:exon:8042;Parent=MsG0480018984.01.T01
Chr4 exon 12864247 12864284 12864247 ID=MsG0480018984.01.T01:exon:8043;Parent=MsG0480018984.01.T01
Chr4 exon 12864363 12864461 12864363 ID=MsG0480018984.01.T01:exon:8044;Parent=MsG0480018984.01.T01
Chr4 exon 12864830 12864967 12864830 ID=MsG0480018984.01.T01:exon:8045;Parent=MsG0480018984.01.T01
Chr4 exon 12865053 12865124 12865053 ID=MsG0480018984.01.T01:exon:8046;Parent=MsG0480018984.01.T01
Chr4 exon 12865278 12865397 12865278 ID=MsG0480018984.01.T01:exon:8047;Parent=MsG0480018984.01.T01
Chr4 five_prime_UTR 12861896 12861991 12861896 ID=MsG0480018984.01.T01:five_prime_utr;Parent=MsG0480018984.01.T01
Chr4 CDS 12861992 12862161 12861992 ID=MsG0480018984.01.T01:cds;Parent=MsG0480018984.01.T01
Chr4 CDS 12862262 12862410 12862262 ID=MsG0480018984.01.T01:cds;Parent=MsG0480018984.01.T01
Chr4 CDS 12863085 12863161 12863085 ID=MsG0480018984.01.T01:cds;Parent=MsG0480018984.01.T01
Chr4 CDS 12863354 12863473 12863354 ID=MsG0480018984.01.T01:cds;Parent=MsG0480018984.01.T01
Chr4 CDS 12863749 12863851 12863749 ID=MsG0480018984.01.T01:cds;Parent=MsG0480018984.01.T01
Chr4 CDS 12864247 12864284 12864247 ID=MsG0480018984.01.T01:cds;Parent=MsG0480018984.01.T01
Chr4 CDS 12864363 12864461 12864363 ID=MsG0480018984.01.T01:cds;Parent=MsG0480018984.01.T01
Chr4 CDS 12864830 12864967 12864830 ID=MsG0480018984.01.T01:cds;Parent=MsG0480018984.01.T01
Chr4 CDS 12865053 12865124 12865053 ID=MsG0480018984.01.T01:cds;Parent=MsG0480018984.01.T01
Chr4 CDS 12865278 12865397 12865278 ID=MsG0480018984.01.T01:cds;Parent=MsG0480018984.01.T01
Chr4 mRNA 12861884 12863856 12861884 ID=MsG0480018984.01.T02;Parent=MsG0480018984.01;Name=MsG0480018984.01.T02;_AED=0.50;_eAED=0.51;_QI=0|1|0.6|1|1|1|5|0|243
Chr4 exon 12861884 12862161 12861884 ID=MsG0480018984.01.T02:exon:8048;Parent=MsG0480018984.01.T02
Chr4 exon 12863749 12863856 12863749 ID=MsG0480018984.01.T02:exon:8049;Parent=MsG0480018984.01.T02
Chr4 CDS 12861884 12862161 12861884 ID=MsG0480018984.01.T02:cds;Parent=MsG0480018984.01.T02
Chr4 CDS 12862262 12862410 12862262 ID=MsG0480018984.01.T02:cds;Parent=MsG0480018984.01.T02
Chr4 CDS 12863085 12863161 12863085 ID=MsG0480018984.01.T02:cds;Parent=MsG0480018984.01.T02
Chr4 CDS 12863354 12863473 12863354 ID=MsG0480018984.01.T02:cds;Parent=MsG0480018984.01.T02
Chr4 CDS 12863749 12863856 12863749 ID=MsG0480018984.01.T02:cds;Parent=MsG0480018984.01.T02
Gene Sequence

>MsG0480018984.01.T02

TTGTGTGTGAGCAGTTCATCTCAAGCACTTCATATATTTTATAGAACCCACGTTCTTATCATCAACAAGAACATTAAAAGTGTCAGAAAGTATTTGGAGCTTGCAAAGATGAACATGTTGGCTCCTTCTTCTCATAATTCACTTCACTATTGTTGTCAGATGCTACTAGCATTTGGACTTTTTAGTTTGAATATGTTAACTCATATTGAAGCTTCTGGCTCAAGGGTTGAACACCTTCCTGGTTTTCAAGGACCTCTTCCTTTTGAACTTGAAACTGGGTACGTGGGGTTAGGAGAAAGAGAGGATGACATGCAAGTGTTTTATTACTTTGTCAAGTCAGAAAATAATCCTCAAAAAGACCCTCTTATGCTTTGGTTATCTGGTGGCCCTGGTTGTTCTTCTTTTTCTGCCCTTTTCTATCAAATAGGTCCGGTTGCATTTGAAATCAAGGAGTACAATGGGAGCATGCCCAGTTTGGTCTCAAGGCCACAGTCATGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATGTCACGGATCACCGGAGCGACTGGAAACTAGTTCACCATACTCATCAATTTCTGAGGAAGTGGCTGGTCGATCACCCTGAATTTCTTTCAAATGAATTCTACTTTGGAGCTGATTCATACTCTGGCATTCCTGTCCCACCCATTCTTCAAGAAATTTCATTTGGTTAG

>MsG0480018984.01.T01

ATGAACATGTTGGCTCCTTCTTCTCATAATTCACTTCACTATTGTTGTCAGATGCTACTAGCATTTGGACTTTTTAGTTTGAATATGTTAACTCATATTGAAGCTTCTGGCTCAAGGGTTGAACACCTTCCTGGTTTTCAAGGACCTCTTCCTTTTGAACTTGAAACTGGGTACGTGGGGTTAGGAGAAAGAGAGGATGACATGCAAGTGTTTTATTACTTTGTCAAGTCAGAAAATAATCCTCAAAAAGACCCTCTTATGCTTTGGTTATCTGGTGGCCCTGGTTGTTCTTCTTTTTCTGCCCTTTTCTATCAAATAGGTCCGGTTGCATTTGAAATCAAGGAGTACAATGGGAGCATGCCCAGTTTGGTCTCAAGGCCACAGTCATGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATGTCACGGATCACCGGAGCGACTGGAAACTAGTTCACCATACTCATCAATTTCTGAGGAAGTGGCTGGTCGATCACCCTGAATTTCTTTCAAATGAATTCTACTTTGGAGCTGATTCATACTCTGGCATTCCTGTCCCACCCATTCTTCAAGAAATTTCATTTGGAAATGAAAAAGGTCTCCAGCCATTGATAAATCTCAAGGGATATCTGCTAGGGAACCCTATAACAACACACACACAAAAAAATTATCAAATCCCATATACTCATGGAATGGGACTCATTTCTGATGAACTCTATGCGTGTCTCTCAGCAATTAATGAGTACAACATTTTGGATAGCAATTGTGAAGATGATGAGCATCTGTGGAGGAGATCTTTGACTCAGGAGCTGAACGAATCTCTTAGTTCTCGTCTCACAGTCCCCGAATTAAGTTGCAAAATTTATGGTTACTACCTCGTAACTAAATGGATTAGCGATGAGAGTGTTCGCAAGGCACTGCATATTCGAGAGGGAACCATAGGAAAATGGGAGCGATGTTACCGTGCTGATTTTGAGCAGGAGATCTTTAGTAGCGTAGAGTTTCATGCAAATCTAAGCAAAAAAGGATACCGCTCTTTGATATACAGGTGA
Protein sequence

>MsG0480018984.01.T02

LCVSSSSQALHIFYRTHVLIINKNIKSVRKYLELAKMNMLAPSSHNSLHYCCQMLLAFGLFSLNMLTHIEASGSRVEHLPGFQGPLPFELETGYVGLGEREDDMQVFYYFVKSENNPQKDPLMLWLSGGPGCSSFSALFYQIGPVAFEIKEYNGSMPSLVSRPQSWTKLCSIIFVDLPLGTGFSYAKNVTDHRSDWKLVHHTHQFLRKWLVDHPEFLSNEFYFGADSYSGIPVPPILQEISFG*

>MsG0480018984.01.T01

MNMLAPSSHNSLHYCCQMLLAFGLFSLNMLTHIEASGSRVEHLPGFQGPLPFELETGYVGLGEREDDMQVFYYFVKSENNPQKDPLMLWLSGGPGCSSFSALFYQIGPVAFEIKEYNGSMPSLVSRPQSWTKLCSIIFVDLPLGTGFSYAKNVTDHRSDWKLVHHTHQFLRKWLVDHPEFLSNEFYFGADSYSGIPVPPILQEISFGNEKGLQPLINLKGYLLGNPITTHTQKNYQIPYTHGMGLISDELYACLSAINEYNILDSNCEDDEHLWRRSLTQELNESLSSRLTVPELSCKIYGYYLVTKWISDESVRKALHIREGTIGKWERCYRADFEQEIFSSVEFHANLSKKGYRSLIYR*