AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010577.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010577.01.T01 MTR_2g087820 83.421 380 10 2 12 339 4 382 0.0 616
MsG0280010577.01.T01 MTR_2g087820 83.202 381 10 3 12 339 4 383 0.0 611
MsG0280010577.01.T01 MTR_7g106770 40.864 301 108 5 19 268 8 289 1.81e-63 203
MsG0280010577.01.T01 MTR_2g022680 35.786 299 113 9 42 285 35 309 8.26e-38 139
MsG0280010577.01.T01 MTR_2g022680 35.235 298 116 9 42 285 35 309 1.07e-37 139
MsG0280010577.01.T01 MTR_2g022680 33.452 281 108 9 60 285 8 264 2.59e-28 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010577.01.T01 AT5G22000 54.303 337 78 6 20 294 8 330 4.00e-101 303
MsG0280010577.01.T01 AT5G22000 54.303 337 78 6 20 294 8 330 5.36e-101 302
MsG0280010577.01.T01 AT5G22000 54.303 337 78 6 20 294 8 330 5.36e-101 302
MsG0280010577.01.T01 AT5G22000 59.193 223 68 4 82 294 50 259 1.71e-68 217
MsG0280010577.01.T01 AT4G14220 51.471 68 33 0 218 285 249 316 3.95e-14 73.2
MsG0280010577.01.T01 AT4G14220 79.412 34 7 0 42 75 43 76 7.36e-13 69.3

Find 111 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGTTTCTGCTTCAGGGTC+TGG 0.177501 2:-71699524 MsG0280010577.01.T01:CDS
TTTGCTGCTGCCGCAGCAAT+GGG 0.220856 2:-71699758 MsG0280010577.01.T01:CDS
CTTCCACCCTCTTGTGCTCT+TGG 0.223955 2:+71699117 None:intergenic
TCAAGGTCGCCCACAGTATT+TGG 0.250152 2:-71699684 MsG0280010577.01.T01:CDS
ACTGACCAGGTTTCTGCTTC+AGG 0.251320 2:-71699530 MsG0280010577.01.T01:CDS
GGTATAGAGTTTCCCATTAC+TGG 0.261222 2:-71698164 MsG0280010577.01.T01:three_prime_UTR
GGACCCATGGGAGGCGAATT+AGG 0.280970 2:+71699647 None:intergenic
CTTAGAAGATGGCCCAATTC+AGG 0.284081 2:-71698942 MsG0280010577.01.T01:CDS
CCTGCTCTGTCTTGGCTACT+TGG 0.289892 2:+71699316 None:intergenic
TGATCACTTGATCCCTGAAT+TGG 0.317057 2:+71698929 None:intergenic
TGCTGTTGCTACTGATAATC+AGG 0.322332 2:-71699495 MsG0280010577.01.T01:CDS
TAAGGAAATATCTATAAATA+AGG 0.327931 2:+71697961 None:intergenic
TTATGTATAAAGATTATCTA+AGG 0.332700 2:+71697943 None:intergenic
CTTTGCTGCTGCCGCAGCAA+TGG 0.342825 2:-71699759 MsG0280010577.01.T01:CDS
AGGTTTCTGCTTCAGGGTCT+GGG 0.350694 2:-71699523 MsG0280010577.01.T01:CDS
ATGACCAACAATTCTCATAT+TGG 0.360374 2:-71698079 MsG0280010577.01.T01:three_prime_UTR
GAAGGGAAGGCCAGAGAAAT+AGG 0.360495 2:-71699715 MsG0280010577.01.T01:CDS
CTGAATATACAATCACATTA+AGG 0.361479 2:+71697996 None:intergenic
ATTTCCAATATGAGAATTGT+TGG 0.373935 2:+71698075 None:intergenic
CTACTTGGAGAAGACTGATT+AGG 0.374448 2:+71699331 None:intergenic
GGCCTTCCCTTCTAGCAATA+TGG 0.379368 2:+71699726 None:intergenic
GGATGTGGTGCATTGCCTAT+TGG 0.383746 2:-71698127 MsG0280010577.01.T01:three_prime_UTR
GGGCCATCTTCTAAGTTACT+TGG 0.386816 2:+71698950 None:intergenic
CAAGGAATCATTACCGTAGA+AGG 0.396274 2:+71701055 None:intergenic
AGTATTTCATATCCAGTAAT+GGG 0.404676 2:+71698152 None:intergenic
GTTCAAATTAAGCATATAGA+AGG 0.409601 2:-71698832 MsG0280010577.01.T01:exon
ACTGCTTCTATTATTGTCTC+TGG 0.435492 2:+71698985 None:intergenic
CACCATCCCCTCTCTGAGGT+GGG 0.441837 2:+71699612 None:intergenic
TTAGAAGATGGCCCAATTCA+GGG 0.442126 2:-71698941 MsG0280010577.01.T01:CDS
GATCACTTGATCCCTGAATT+GGG 0.444575 2:+71698930 None:intergenic
CTGACCAGGTTTCTGCTTCA+GGG 0.449867 2:-71699529 MsG0280010577.01.T01:CDS
GAGCACGCCATATTGCTAGA+AGG 0.452013 2:-71699733 MsG0280010577.01.T01:CDS
TCTTCCCCGGTCGCAGGAGT+TGG 0.454576 2:+71699587 None:intergenic
TCAGCATCATTTGCTCCAAC+TGG 0.455590 2:+71699806 None:intergenic
TAAAACGATTATCAGCCAAT+AGG 0.460128 2:+71698112 None:intergenic
GAGCTGATGACCTATTTCTC+TGG 0.461666 2:+71699705 None:intergenic
GGTGGTTCTTCCCCGGTCGC+AGG 0.462908 2:+71699581 None:intergenic
TCATCCTAATTCGCCTCCCA+TGG 0.464195 2:-71699651 MsG0280010577.01.T01:CDS
GTTTCATTCTCTTCAATCAC+AGG 0.469265 2:+71701187 None:intergenic
GAAACCTGGTCAGTTTGAAC+TGG 0.469370 2:+71699539 None:intergenic
CATCGACAGCGATCCTTCTA+CGG 0.471243 2:-71701068 MsG0280010577.01.T01:intron
CTGATGGTCCTGCTCTGTCT+TGG 0.480139 2:+71699308 None:intergenic
TCACCATCCCCTCTCTGAGG+TGG 0.481848 2:+71699611 None:intergenic
GGAAGGAAAGGTGGTTCTCT+CGG 0.483550 2:-71699099 MsG0280010577.01.T01:CDS
CAGTATTTCATATCCAGTAA+TGG 0.485362 2:+71698151 None:intergenic
ACTAGCCCTATGTCTGATCT+TGG 0.487369 2:-71699076 MsG0280010577.01.T01:CDS
ATCTTCAATGTATTCTCGAA+TGG 0.496312 2:-71700926 MsG0280010577.01.T01:CDS
AACTAAATGCCGTGTCTACA+AGG 0.497894 2:-71699252 MsG0280010577.01.T01:intron
GGTGAACCAACTCCTGCGAC+CGG 0.498526 2:-71699593 MsG0280010577.01.T01:CDS
GCATTTAACAGACACTGAAA+GGG 0.499300 2:-71698906 MsG0280010577.01.T01:CDS
TCAGAGATTCTGAAAATGAC+TGG 0.500673 2:+71699281 None:intergenic
CGGTGTACACCGTGATTACG+TGG 0.501519 2:-71702283 MsG0280010577.01.T01:CDS
CTTCCTCCCCACCTCAGAGA+GGG 0.511067 2:-71699619 MsG0280010577.01.T01:CDS
AGCATTTAACAGACACTGAA+AGG 0.512472 2:-71698907 MsG0280010577.01.T01:CDS
CTGCGGCAGCAGCAAAGTGT+TGG 0.513158 2:+71699765 None:intergenic
GTTAAGCGAGAAGTTAATGC+AGG 0.514974 2:-71699046 MsG0280010577.01.T01:CDS
GAGCTGTGGTGGTTCTTCCC+CGG 0.516342 2:+71699574 None:intergenic
AGGGATTATATTATAACAGC+AGG 0.522620 2:-71699475 MsG0280010577.01.T01:intron
GCACAAGAGGGTGGAAGGAA+AGG 0.524837 2:-71699111 MsG0280010577.01.T01:CDS
GAGGAAGAAGCAGGACCCAT+GGG 0.525167 2:+71699635 None:intergenic
ACCATCCCCTCTCTGAGGTG+GGG 0.526781 2:+71699613 None:intergenic
TTTGAGTTATTGTCTCTCAA+AGG 0.532237 2:+71698878 None:intergenic
TCAATTTCCAAGAGCACAAG+AGG 0.533477 2:-71699124 MsG0280010577.01.T01:CDS
TGAGGTGGGGAGGAAGAAGC+AGG 0.533669 2:+71699626 None:intergenic
GCTCCAAGTAACTTAGAAGA+TGG 0.536420 2:-71698953 MsG0280010577.01.T01:CDS
CGCCATATTGCTAGAAGGGA+AGG 0.537963 2:-71699728 MsG0280010577.01.T01:CDS
GTCACGCATGATGGAACGCT+TGG 0.538710 2:-71699011 MsG0280010577.01.T01:CDS
TGCAACTGTGTCACGCATGA+TGG 0.539531 2:-71699020 MsG0280010577.01.T01:CDS
CAAGAGCACAAGAGGGTGGA+AGG 0.539655 2:-71699116 MsG0280010577.01.T01:CDS
GTGAACCAACTCCTGCGACC+GGG 0.541851 2:-71699592 MsG0280010577.01.T01:CDS
CAGACCCTGAAGCAGAAACC+TGG 0.544041 2:+71699525 None:intergenic
TTGCTGCTGCCGCAGCAATG+GGG 0.545005 2:-71699757 MsG0280010577.01.T01:CDS
TCCCCACCTCAGAGAGGGGA+TGG 0.545353 2:-71699614 MsG0280010577.01.T01:CDS
TCCTCCAGTTCAAACTGACC+AGG 0.548328 2:-71699543 MsG0280010577.01.T01:CDS
GGAGGAAGAAGCAGGACCCA+TGG 0.548542 2:+71699634 None:intergenic
CCAAGTAGCCAAGACAGAGC+AGG 0.549049 2:-71699316 MsG0280010577.01.T01:CDS
TATCTATAAATAAGGTTACA+AGG 0.550119 2:+71697969 None:intergenic
TCAGATCCAAGATCAGACAT+AGG 0.560077 2:+71699070 None:intergenic
TTCCTCCCCACCTCAGAGAG+GGG 0.561437 2:-71699618 MsG0280010577.01.T01:CDS
ATCCCCTCTCTGAGGTGGGG+AGG 0.567339 2:+71699616 None:intergenic
GCGTGCTCGCCCCATTGCTG+CGG 0.568370 2:+71699748 None:intergenic
ACCTGGTCAGTTTGAACTGG+AGG 0.573400 2:+71699542 None:intergenic
AGCACGCCATATTGCTAGAA+GGG 0.574619 2:-71699732 MsG0280010577.01.T01:CDS
CATCCTAATTCGCCTCCCAT+GGG 0.575099 2:-71699650 MsG0280010577.01.T01:CDS
CAGATCCAAGATCAGACATA+GGG 0.575591 2:+71699071 None:intergenic
TCACGTAACCCACGTAATCA+CGG 0.579643 2:+71702274 None:intergenic
TGAACCAACTCCTGCGACCG+GGG 0.581685 2:-71699591 MsG0280010577.01.T01:CDS
GAAAATGACTGGAGTTCTGA+TGG 0.583504 2:+71699292 None:intergenic
ACATACTATCATCTGGGCTG+AGG 0.589155 2:-71697882 MsG0280010577.01.T01:three_prime_UTR
TCTTCCTCCCCACCTCAGAG+AGG 0.600091 2:-71699620 MsG0280010577.01.T01:CDS
CAAGAGGGTGGAAGGAAAGG+TGG 0.608314 2:-71699108 MsG0280010577.01.T01:CDS
GATCTCGTACAGTTGCCAGT+TGG 0.610179 2:-71699821 MsG0280010577.01.T01:intron
GAAGAAGCAGGACCCATGGG+AGG 0.611341 2:+71699638 None:intergenic
GATATGAAATACTGTGGATG+TGG 0.615339 2:-71698142 MsG0280010577.01.T01:three_prime_UTR
AGAAATAGGTCATCAGCTCA+AGG 0.626822 2:-71699701 MsG0280010577.01.T01:CDS
GGTTCACCATCCCCTCTCTG+AGG 0.630053 2:+71699608 None:intergenic
GGAACTAAAGTGAGCTGTGG+TGG 0.631179 2:+71699563 None:intergenic
ATCCAACTACCTTGTAGACA+CGG 0.631507 2:+71699243 None:intergenic
TTTCCAAGAGCACAAGAGGG+TGG 0.634688 2:-71699120 MsG0280010577.01.T01:CDS
CGATGTCGACATGAAGGTGG+CGG 0.634826 2:-71702303 None:intergenic
GCTGAAAATACCAAATACTG+TGG 0.638935 2:+71699674 None:intergenic
TTAAGCGAGAAGTTAATGCA+GGG 0.640905 2:-71699045 MsG0280010577.01.T01:CDS
AGAGAATGAAACAAAGTCTG+AGG 0.651149 2:-71701176 MsG0280010577.01.T01:CDS
CTGAAAATACCAAATACTGT+GGG 0.652529 2:+71699675 None:intergenic
GCTGTTGCTACTGATAATCA+GGG 0.655156 2:-71699494 MsG0280010577.01.T01:CDS
TGCCGATGTCGACATGAAGG+TGG 0.660263 2:-71702306 None:intergenic
CATTTAACAGACACTGAAAG+GGG 0.667323 2:-71698905 MsG0280010577.01.T01:CDS
GGAGGAACTAAAGTGAGCTG+TGG 0.683171 2:+71699560 None:intergenic
TTACTGGATATGAAATACTG+TGG 0.685828 2:-71698148 MsG0280010577.01.T01:three_prime_UTR
CAATTTCCAAGAGCACAAGA+GGG 0.707688 2:-71699123 MsG0280010577.01.T01:CDS
GGTGTACACCGTGATTACGT+GGG 0.716812 2:-71702282 MsG0280010577.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATTGAATGTAATAA+AGG - Chr2:71698543-71698562 MsG0280010577.01.T01:intron 10.0%
!! TAATGTATAGTATATATATA+AGG + Chr2:71698364-71698383 None:intergenic 10.0%
!! TACAATATTTAATGTAATAA+AGG - Chr2:71698519-71698538 MsG0280010577.01.T01:intron 10.0%
!!! TTTCTATTTGTATTTTTTTA+TGG + Chr2:71698238-71698257 None:intergenic 10.0%
!! CAAAAATTATATGAAAAGAA+AGG + Chr2:71698788-71698807 None:intergenic 15.0%
!! GAAAATACATAATATATGTA+AGG - Chr2:71698190-71698209 MsG0280010577.01.T01:intron 15.0%
!! TAAGGAAATATCTATAAATA+AGG + Chr2:71702168-71702187 None:intergenic 15.0%
!! TATTTCTTAAAACTTAAAAC+AGG - Chr2:71700766-71700785 MsG0280010577.01.T01:intron 15.0%
!! TGGTAAAATTATAAAATAGA+TGG + Chr2:71699822-71699841 None:intergenic 15.0%
!! TTATGTATAAAGATTATCTA+AGG + Chr2:71702186-71702205 None:intergenic 15.0%
!!! ATTAATTGATTTTTGTTTTG+TGG + Chr2:71698075-71698094 None:intergenic 15.0%
!!! CCAATTTAAAATTTTGATTT+CGG + Chr2:71699486-71699505 None:intergenic 15.0%
!!! CGAAATCAAAATTTTAAATT+GGG - Chr2:71699484-71699503 MsG0280010577.01.T01:CDS 15.0%
!!! GTATTTTATTTATCAGAAAA+CGG + Chr2:71701787-71701806 None:intergenic 15.0%
!!! GTTTTATTTTGTTTTTTGAA+TGG - Chr2:71701419-71701438 MsG0280010577.01.T01:intron 15.0%
!!! TTAATTGATTTTTGTTTTGT+GGG + Chr2:71698074-71698093 None:intergenic 15.0%
!!! TTTTCACATTTATTGTTTTT+TGG - Chr2:71699750-71699769 MsG0280010577.01.T01:CDS 15.0%
!! AAAAATTAACAGACGAATAA+AGG + Chr2:71699231-71699250 None:intergenic 20.0%
!! ACATTAATCTATTTGTCTAT+GGG + Chr2:71698143-71698162 None:intergenic 20.0%
!! ATAAAGATTAGATAAATAGC+TGG + Chr2:71701844-71701863 None:intergenic 20.0%
!! ATTGAATGTAATAAAGGTAA+AGG - Chr2:71698549-71698568 MsG0280010577.01.T01:intron 20.0%
!! ATTTATCTAATCTTTATCTC+TGG - Chr2:71701847-71701866 MsG0280010577.01.T01:intron 20.0%
!! TATCTACAAAAGAAATAGAA+CGG + Chr2:71701678-71701697 None:intergenic 20.0%
!! TATCTATAAATAAGGTTACA+AGG + Chr2:71702160-71702179 None:intergenic 20.0%
!! TGAAAAGAAAGGAAATTAAT+CGG + Chr2:71698777-71698796 None:intergenic 20.0%
!!! ACTCTTTAAAAAAAATCAGA+GGG + Chr2:71698459-71698478 None:intergenic 20.0%
!!! CATTTGTTATTTCATATATG+TGG - Chr2:71699628-71699647 MsG0280010577.01.T01:CDS 20.0%
!!! CCGAAATCAAAATTTTAAAT+TGG - Chr2:71699483-71699502 MsG0280010577.01.T01:CDS 20.0%
!!! CTATTTGTATTTTTTTATGG+TGG + Chr2:71698235-71698254 None:intergenic 20.0%
!!! GATTTTGATTTTGATTTTTC+TGG - Chr2:71698846-71698865 MsG0280010577.01.T01:CDS 20.0%
!!! TAATTGATTTTTGTTTTGTG+GGG + Chr2:71698073-71698092 None:intergenic 20.0%
!!! TACTCTTTAAAAAAAATCAG+AGG + Chr2:71698460-71698479 None:intergenic 20.0%
!!! TTGAATTTTTGTTTGTTGTT+AGG - Chr2:71698914-71698933 MsG0280010577.01.T01:CDS 20.0%
!!! TTGATGTTACATTTTTTTTG+TGG - Chr2:71698316-71698335 MsG0280010577.01.T01:intron 20.0%
!!! TTGATTTTTTGATGTTATAG+TGG - Chr2:71698880-71698899 MsG0280010577.01.T01:CDS 20.0%
!!! TTTTAAACATACTATCATCT+GGG - Chr2:71702238-71702257 MsG0280010577.01.T01:intron 20.0%
!!! TTTTTAAACATACTATCATC+TGG - Chr2:71702237-71702256 MsG0280010577.01.T01:intron 20.0%
! AAAGATACAGAAATCCAAAA+TGG + Chr2:71700687-71700706 None:intergenic 25.0%
! AACTAACTACTAAAGAAAGT+TGG + Chr2:71699777-71699796 None:intergenic 25.0%
! AATATTTCATCATCCAACAT+TGG - Chr2:71700191-71700210 MsG0280010577.01.T01:intron 25.0%
! ACTTTCTTTAGTAGTTAGTT+TGG - Chr2:71699777-71699796 MsG0280010577.01.T01:CDS 25.0%
! AGAGTTTGGTAAATATAATC+TGG - Chr2:71698484-71698503 MsG0280010577.01.T01:intron 25.0%
! AGTATTTCATATCCAGTAAT+GGG + Chr2:71701977-71701996 None:intergenic 25.0%
! ATAGTTAAGATCATACCTTT+AGG + Chr2:71701347-71701366 None:intergenic 25.0%
! ATATTTCATCATCCAACATT+GGG - Chr2:71700192-71700211 MsG0280010577.01.T01:intron 25.0%
! ATTTCCAATATGAGAATTGT+TGG + Chr2:71702054-71702073 None:intergenic 25.0%
! CATAATATATGTAAGGTCTA+AGG - Chr2:71698197-71698216 MsG0280010577.01.T01:intron 25.0%
! CCAAAATATATCAGTCAATA+TGG + Chr2:71699842-71699861 None:intergenic 25.0%
! CTGAATATACAATCACATTA+AGG + Chr2:71702133-71702152 None:intergenic 25.0%
! CTTATAATCAGAACATGTTA+GGG + Chr2:71701624-71701643 None:intergenic 25.0%
! GACATTAATCTATTTGTCTA+TGG + Chr2:71698144-71698163 None:intergenic 25.0%
! GATCACAAAAAATCACATAA+TGG + Chr2:71700289-71700308 None:intergenic 25.0%
! GTAATAAAGGTAAAGGAAAA+AGG - Chr2:71698556-71698575 MsG0280010577.01.T01:intron 25.0%
! GTTCAAATTAAGCATATAGA+AGG - Chr2:71701294-71701313 MsG0280010577.01.T01:intron 25.0%
! TAAACTAATTAATTGCATCC+AGG - Chr2:71698105-71698124 MsG0280010577.01.T01:three_prime_UTR 25.0%
! TATAGAAAACAAATAATGCC+AGG + Chr2:71700062-71700081 None:intergenic 25.0%
! TGAAATGCTTCTCAAAATAA+AGG - Chr2:71699711-71699730 MsG0280010577.01.T01:CDS 25.0%
! TGAGTTTGATTATTACAACT+TGG + Chr2:71698026-71698045 None:intergenic 25.0%
! TTAAAAACAGATTTATCTCG+AGG + Chr2:71702224-71702243 None:intergenic 25.0%
! TTATAAAATAGATGGTAGTC+AGG + Chr2:71699814-71699833 None:intergenic 25.0%
! TTATAATCAGAACATGTTAG+GGG + Chr2:71701623-71701642 None:intergenic 25.0%
!! ACAGTAAAAATTTGAAGTTC+AGG + Chr2:71700965-71700984 None:intergenic 25.0%
!! ATGGATTTTTCTATCATATC+AGG - Chr2:71701937-71701956 MsG0280010577.01.T01:intron 25.0%
!! ATTTTTCTATCATATCAGGT+AGG - Chr2:71701941-71701960 MsG0280010577.01.T01:intron 25.0%
!! TACTATTACATCAAAGTGTT+AGG - Chr2:71698410-71698429 MsG0280010577.01.T01:intron 25.0%
!! TTAATTTTTGATCGGTAACT+GGG - Chr2:71699242-71699261 MsG0280010577.01.T01:intron 25.0%
!! TTAGTAGTTAGTTTGGAAAT+TGG - Chr2:71699784-71699803 MsG0280010577.01.T01:CDS 25.0%
!! TTCGTCTGTTAATTTTTGAT+CGG - Chr2:71699234-71699253 MsG0280010577.01.T01:intron 25.0%
!!! AATTGATTTTTGTTTTGTGG+GGG + Chr2:71698072-71698091 None:intergenic 25.0%
!!! ATCACATAATGGATGATAAA+TGG + Chr2:71700278-71700297 None:intergenic 25.0%
!!! ATTTTGGATCATTGTTTTTG+TGG - Chr2:71699855-71699874 MsG0280010577.01.T01:intron 25.0%
!!! CCATATTGACTGATATATTT+TGG - Chr2:71699839-71699858 MsG0280010577.01.T01:intron 25.0%
!!! GAAATGCCTTTTTTTTTCTT+CGG - Chr2:71699415-71699434 MsG0280010577.01.T01:intron 25.0%
!!! TGTTTGTCGTTTTTAACATT+TGG - Chr2:71699134-71699153 MsG0280010577.01.T01:CDS 25.0%
!!! TTAAAGAGTATTTCAGAGTT+TGG - Chr2:71698470-71698489 MsG0280010577.01.T01:intron 25.0%
!!! TTGTATTTTTTTATGGTGGT+CGG + Chr2:71698231-71698250 None:intergenic 25.0%
AAAAGAAATAGAACGGTCAT+TGG + Chr2:71701671-71701690 None:intergenic 30.0%
AAAATCCATCAGTACAGTAA+TGG + Chr2:71701926-71701945 None:intergenic 30.0%
AAATCAAATAACAACGAAGC+AGG + Chr2:71698831-71698850 None:intergenic 30.0%
AAGAAAAAAAGATGCAATGG+TGG - Chr2:71702083-71702102 MsG0280010577.01.T01:intron 30.0%
AGGGATTATATTATAACAGC+AGG - Chr2:71700651-71700670 MsG0280010577.01.T01:intron 30.0%
ATAGAAAACCATATCACTTG+AGG + Chr2:71699348-71699367 None:intergenic 30.0%
ATCTAGCCGAAGAAAAAAAA+AGG + Chr2:71699424-71699443 None:intergenic 30.0%
ATCTTCAATGTATTCTCGAA+TGG - Chr2:71699200-71699219 MsG0280010577.01.T01:intron 30.0%
ATGACCAACAATTCTCATAT+TGG - Chr2:71702047-71702066 MsG0280010577.01.T01:intron 30.0%
ATGTTATAGTGGTGTTTGAT+TGG - Chr2:71698891-71698910 MsG0280010577.01.T01:CDS 30.0%
CAAGGTTCAAAATACTAACA+AGG + Chr2:71701541-71701560 None:intergenic 30.0%
CAGTATTTCATATCCAGTAA+TGG + Chr2:71701978-71701997 None:intergenic 30.0%
CTCAAGAAAAAAAGATGCAA+TGG - Chr2:71702080-71702099 MsG0280010577.01.T01:intron 30.0%
CTGAAAATACCAAATACTGT+GGG + Chr2:71700454-71700473 None:intergenic 30.0%
GCTTATAATCAGAACATGTT+AGG + Chr2:71701625-71701644 None:intergenic 30.0%
TAAAACGATTATCAGCCAAT+AGG + Chr2:71702017-71702036 None:intergenic 30.0%
TATAATCAGAACATGTTAGG+GGG + Chr2:71701622-71701641 None:intergenic 30.0%
TATTTCATCATCCAACATTG+GGG - Chr2:71700193-71700212 MsG0280010577.01.T01:intron 30.0%
TGCTATATCAAATTGAGTGT+TGG + Chr2:71699563-71699582 None:intergenic 30.0%
TGTTCTGATTATAAGCTAGT+CGG - Chr2:71701629-71701648 MsG0280010577.01.T01:intron 30.0%
TGTTGGATGATGAAATATTG+TGG + Chr2:71700190-71700209 None:intergenic 30.0%
TTACTGGATATGAAATACTG+TGG - Chr2:71701978-71701997 MsG0280010577.01.T01:intron 30.0%
! AAGAAGTGTAACATGTTGAT+AGG + Chr2:71698389-71698408 None:intergenic 30.0%
! ATTTGAAGTTCAGGTTACAA+TGG + Chr2:71700956-71700975 None:intergenic 30.0%
! CAGGTAATGATTTTCCATTT+TGG - Chr2:71700670-71700689 MsG0280010577.01.T01:intron 30.0%
! GTTAATTTTTGATCGGTAAC+TGG - Chr2:71699241-71699260 MsG0280010577.01.T01:intron 30.0%
! TTTGAAGTTCAGGTTACAAT+GGG + Chr2:71700955-71700974 None:intergenic 30.0%
! TTTGAGTTATTGTCTCTCAA+AGG + Chr2:71701251-71701270 None:intergenic 30.0%
!! AATATTGTGGCATTTCTAGT+CGG + Chr2:71700177-71700196 None:intergenic 30.0%
!! AATTCTTACTTTTATCGTGC+AGG - Chr2:71699924-71699943 MsG0280010577.01.T01:intron 30.0%
!! CATAATGGATGATAAATGGT+AGG + Chr2:71700274-71700293 None:intergenic 30.0%
!! GATAGTTTTGCAATCAAACA+CGG + Chr2:71702291-71702310 None:intergenic 30.0%
!! TTAGTATACTTGTGCTACTT+TGG - Chr2:71700235-71700254 MsG0280010577.01.T01:intron 30.0%
!! TTATTTTGTTATCTGTCTCC+TGG - Chr2:71700041-71700060 MsG0280010577.01.T01:intron 30.0%
!!! ATTTTGAGAAGCATTTCACT+TGG + Chr2:71699709-71699728 None:intergenic 30.0%
!!! TGTATTTTTTTATGGTGGTC+GGG + Chr2:71698230-71698249 None:intergenic 30.0%
AAGAATCCAAGATCAGAACA+AGG + Chr2:71701507-71701526 None:intergenic 35.0%
ACGTCAACAACTAGAAAACT+TGG + Chr2:71700736-71700755 None:intergenic 35.0%
ACTAATAGATTGCCAACACA+TGG + Chr2:71699972-71699991 None:intergenic 35.0%
ACTGCTTCTATTATTGTCTC+TGG + Chr2:71701144-71701163 None:intergenic 35.0%
AGAGAATGAAACAAAGTCTG+AGG - Chr2:71698950-71698969 MsG0280010577.01.T01:CDS 35.0%
AGCATTTAACAGACACTGAA+AGG - Chr2:71701219-71701238 MsG0280010577.01.T01:intron 35.0%
ATAATCAGAACATGTTAGGG+GGG + Chr2:71701621-71701640 None:intergenic 35.0%
ATAGTCACTGTTATGCTTCT+TGG - Chr2:71699307-71699326 MsG0280010577.01.T01:CDS 35.0%
ATTAGCAGAGCAAGATTACA+TGG + Chr2:71699661-71699680 None:intergenic 35.0%
ATTTCATCATCCAACATTGG+GGG - Chr2:71700194-71700213 MsG0280010577.01.T01:intron 35.0%
ATTTGGCAAATGGAAATGCT+TGG - Chr2:71699881-71699900 MsG0280010577.01.T01:intron 35.0%
CATTTAACAGACACTGAAAG+GGG - Chr2:71701221-71701240 MsG0280010577.01.T01:intron 35.0%
CCTTAGTGACACTGAAAAAA+TGG - Chr2:71699379-71699398 MsG0280010577.01.T01:intron 35.0%
CTAATAGATTGCCAACACAT+GGG + Chr2:71699971-71699990 None:intergenic 35.0%
CTAGTTGTTGACGTTCTTAT+CGG - Chr2:71700742-71700761 MsG0280010577.01.T01:intron 35.0%
GATATGAAATACTGTGGATG+TGG - Chr2:71701984-71702003 MsG0280010577.01.T01:intron 35.0%
GCATTTAACAGACACTGAAA+GGG - Chr2:71701220-71701239 MsG0280010577.01.T01:intron 35.0%
GCTGAAAATACCAAATACTG+TGG + Chr2:71700455-71700474 None:intergenic 35.0%
GGATTTCTATGTACTTGGTT+TGG + Chr2:71697894-71697913 None:intergenic 35.0%
GTAATCTTGCTCTGCTAATT+TGG - Chr2:71699662-71699681 MsG0280010577.01.T01:CDS 35.0%
GTGAAAATTACAAACCCTGT+TGG + Chr2:71700004-71700023 None:intergenic 35.0%
GTTTCATTCTCTTCAATCAC+AGG + Chr2:71698942-71698961 None:intergenic 35.0%
TAATAGATTGCCAACACATG+GGG + Chr2:71699970-71699989 None:intergenic 35.0%
TCTTTAGGTAACACTCTACA+AGG - Chr2:71699517-71699536 MsG0280010577.01.T01:CDS 35.0%
TGAATTGAGAAAACCCTAGA+AGG + Chr2:71698682-71698701 None:intergenic 35.0%
TGAGAATCAGTGAGTTTAGT+CGG + Chr2:71698747-71698766 None:intergenic 35.0%
TGCAATAAGAGACCAACAAA+AGG + Chr2:71701882-71701901 None:intergenic 35.0%
TTAAGCGAGAAGTTAATGCA+GGG - Chr2:71701081-71701100 MsG0280010577.01.T01:CDS 35.0%
TTATGCCATTACTGTACTGA+TGG - Chr2:71701918-71701937 MsG0280010577.01.T01:intron 35.0%
! AATTGTTGGTCATCTTTTGC+AGG + Chr2:71702040-71702059 None:intergenic 35.0%
! GTAGAGTGTTACCTAAAGAT+AGG + Chr2:71699516-71699535 None:intergenic 35.0%
! TCAGAGATTCTGAAAATGAC+TGG + Chr2:71700848-71700867 None:intergenic 35.0%
! TCAGATCTGTTTTGTCCTAA+AGG - Chr2:71701329-71701348 MsG0280010577.01.T01:intron 35.0%
! TGGATTTGAAAGCCTTTTGT+TGG - Chr2:71701867-71701886 MsG0280010577.01.T01:intron 35.0%
! TTGAAGTTCAGGTTACAATG+GGG + Chr2:71700954-71700973 None:intergenic 35.0%
! TTGGCAATCTATTAGTCTCA+AGG - Chr2:71699976-71699995 MsG0280010577.01.T01:intron 35.0%
! TTTTGTTGAAGGTGGAATTC+AGG - Chr2:71698995-71699014 MsG0280010577.01.T01:CDS 35.0%
! TTTTTCTTCGGCTAGATAAC+TGG - Chr2:71699427-71699446 MsG0280010577.01.T01:intron 35.0%
!! AGTGTCTGAAATTTTGCTTC+TGG + Chr2:71699605-71699624 None:intergenic 35.0%
!! GTGTCTGAAATTTTGCTTCT+GGG + Chr2:71699604-71699623 None:intergenic 35.0%
!! TAAAGGTGTTGAGGAGTTAA+AGG + Chr2:71701566-71701585 None:intergenic 35.0%
!!! CCATTTTTTCAGTGTCACTA+AGG + Chr2:71699382-71699401 None:intergenic 35.0%
!!! TTGGATGTTACTTTTGCTGT+AGG - Chr2:71699153-71699172 MsG0280010577.01.T01:intron 35.0%
AAACCCTAGAAGGAAGAAAG+AGG + Chr2:71698672-71698691 None:intergenic 40.0%
AACCCTAGAAGGAAGAAAGA+GGG + Chr2:71698671-71698690 None:intergenic 40.0%
AACTAAATGCCGTGTCTACA+AGG - Chr2:71700874-71700893 MsG0280010577.01.T01:intron 40.0%
AACTCAAAATCCCCCAATGT+TGG + Chr2:71700207-71700226 None:intergenic 40.0%
AGAAATAGGTCATCAGCTCA+AGG - Chr2:71700425-71700444 MsG0280010577.01.T01:intron 40.0%
AGAAGGAAGAAAGAGGGAAA+GGG + Chr2:71698665-71698684 None:intergenic 40.0%
AGAGCAAGATTACATGGAAC+GGG + Chr2:71699655-71699674 None:intergenic 40.0%
AGATCAGAACAAGGTAGACA+CGG + Chr2:71701498-71701517 None:intergenic 40.0%
AGGCAGTTATCCTTCAAGAT+AGG - Chr2:71699537-71699556 MsG0280010577.01.T01:CDS 40.0%
AGTACATAGAAATCCGCGTA+AGG - Chr2:71697899-71697918 MsG0280010577.01.T01:three_prime_UTR 40.0%
AGTCATTACTACCAACCACA+AGG + Chr2:71699092-71699111 None:intergenic 40.0%
ATCCAACTACCTTGTAGACA+CGG + Chr2:71700886-71700905 None:intergenic 40.0%
CAAGGAATCATTACCGTAGA+AGG + Chr2:71699074-71699093 None:intergenic 40.0%
CAGAGCAAGATTACATGGAA+CGG + Chr2:71699656-71699675 None:intergenic 40.0%
CAGATCCAAGATCAGACATA+GGG + Chr2:71701058-71701077 None:intergenic 40.0%
CTACTTGGAGAAGACTGATT+AGG + Chr2:71700798-71700817 None:intergenic 40.0%
GACCAAACTAACCATACCTT+TGG + Chr2:71697999-71698018 None:intergenic 40.0%
GAGACAACATGCATGTTTGT+TGG + Chr2:71701758-71701777 None:intergenic 40.0%
GATCACTTGATCCCTGAATT+GGG + Chr2:71701199-71701218 None:intergenic 40.0%
GCTCCAAGTAACTTAGAAGA+TGG - Chr2:71701173-71701192 MsG0280010577.01.T01:CDS 40.0%
GCTGTTGCTACTGATAATCA+GGG - Chr2:71700632-71700651 MsG0280010577.01.T01:intron 40.0%
GGTATAGAGTTTCCCATTAC+TGG - Chr2:71701962-71701981 MsG0280010577.01.T01:intron 40.0%
GGTTTGAGCTAAGGGATTAA+AGG + Chr2:71701583-71701602 None:intergenic 40.0%
GTGATGTAAGGTAAGAAGAG+TGG + Chr2:71698617-71698636 None:intergenic 40.0%
GTTAAGCGAGAAGTTAATGC+AGG - Chr2:71701080-71701099 MsG0280010577.01.T01:CDS 40.0%
GTTGAGGAGTTAAAGGTTCA+AGG + Chr2:71701559-71701578 None:intergenic 40.0%
TACGCGGATTTCTATGTACT+TGG + Chr2:71697899-71697918 None:intergenic 40.0%
TAGAAGGAAGAAAGAGGGAA+AGG + Chr2:71698666-71698685 None:intergenic 40.0%
TATGGGCAAGCAAAAATACC+TGG + Chr2:71698126-71698145 None:intergenic 40.0%
TCAAAAACATCTTGCACTGC+AGG - Chr2:71701266-71701285 MsG0280010577.01.T01:intron 40.0%
TCAGATCCAAGATCAGACAT+AGG + Chr2:71701059-71701078 None:intergenic 40.0%
TCTACGGTAATGATTCCTTG+TGG - Chr2:71699074-71699093 MsG0280010577.01.T01:CDS 40.0%
TGATCACTTGATCCCTGAAT+TGG + Chr2:71701200-71701219 None:intergenic 40.0%
TGCTGTTGCTACTGATAATC+AGG - Chr2:71700631-71700650 MsG0280010577.01.T01:intron 40.0%
TGTCTACCTTGTTCTGATCT+TGG - Chr2:71701498-71701517 MsG0280010577.01.T01:intron 40.0%
TTAGAAGATGGCCCAATTCA+GGG - Chr2:71701185-71701204 MsG0280010577.01.T01:CDS 40.0%
TTAGTCTCAAGGATCCAACA+GGG - Chr2:71699987-71700006 MsG0280010577.01.T01:intron 40.0%
TTATGCTTCTTGGAGACCAA+CGG - Chr2:71699317-71699336 MsG0280010577.01.T01:CDS 40.0%
TTCCCTCTTTCTTCCTTCTA+GGG - Chr2:71698666-71698685 MsG0280010577.01.T01:intron 40.0%
TTTCCCTCTTTCTTCCTTCT+AGG - Chr2:71698665-71698684 MsG0280010577.01.T01:intron 40.0%
! AGCCAAAGGTATGGTTAGTT+TGG - Chr2:71697994-71698013 MsG0280010577.01.T01:three_prime_UTR 40.0%
! ATTAGTCTCAAGGATCCAAC+AGG - Chr2:71699986-71700005 MsG0280010577.01.T01:intron 40.0%
! CAACATGCATGTTTGTTGGT+AGG + Chr2:71701754-71701773 None:intergenic 40.0%
! CAATTTCCAAGAGCACAAGA+GGG - Chr2:71701003-71701022 MsG0280010577.01.T01:intron 40.0%
! CGATTTTCCGATTTTCTCCA+TGG - Chr2:71698707-71698726 MsG0280010577.01.T01:intron 40.0%
! GAAAATGACTGGAGTTCTGA+TGG + Chr2:71700837-71700856 None:intergenic 40.0%
! TCAATTTCCAAGAGCACAAG+AGG - Chr2:71701002-71701021 MsG0280010577.01.T01:intron 40.0%
! TTGGGTGTTAGCCTATCTTT+AGG - Chr2:71699502-71699521 MsG0280010577.01.T01:CDS 40.0%
! TTTGTTGTGTGTGTTTGGTG+CGG + Chr2:71698639-71698658 None:intergenic 40.0%
!! CTAAGGGATTAAAGGTGTTG+AGG + Chr2:71701575-71701594 None:intergenic 40.0%
!!! CATTGTTTTTGTGGCGCATT+TGG - Chr2:71699864-71699883 MsG0280010577.01.T01:intron 40.0%
!!! CGGTAACTGGGTGTTTTTTT+TGG - Chr2:71699254-71699273 MsG0280010577.01.T01:CDS 40.0%
ACATACTATCATCTGGGCTG+AGG - Chr2:71702244-71702263 MsG0280010577.01.T01:intron 45.0%
ACCTCGTCCATGGAGAAAAT+CGG + Chr2:71698717-71698736 None:intergenic 45.0%
ACTAGCCCTATGTCTGATCT+TGG - Chr2:71701050-71701069 MsG0280010577.01.T01:intron 45.0%
AGCACGCCATATTGCTAGAA+GGG - Chr2:71700394-71700413 MsG0280010577.01.T01:intron 45.0%
CCAAGACTTAGCCAAAGGTA+TGG - Chr2:71697985-71698004 MsG0280010577.01.T01:three_prime_UTR 45.0%
CCATACCTTTGGCTAAGTCT+TGG + Chr2:71697988-71698007 None:intergenic 45.0%
CGGTAATGATTCCTTGTGGT+TGG - Chr2:71699078-71699097 MsG0280010577.01.T01:CDS 45.0%
CGTCGTAAGCTTATCTCAGT+TGG - Chr2:71698163-71698182 MsG0280010577.01.T01:three_prime_UTR 45.0%
CGTGGCTTAACAACAGTTAG+TGG - Chr2:71697958-71697977 MsG0280010577.01.T01:three_prime_UTR 45.0%
CTAACTGTTGTTAAGCCACG+TGG + Chr2:71697958-71697977 None:intergenic 45.0%
CTTAGAAGATGGCCCAATTC+AGG - Chr2:71701184-71701203 MsG0280010577.01.T01:CDS 45.0%
GAAACCTGGTCAGTTTGAAC+TGG + Chr2:71700590-71700609 None:intergenic 45.0%
GAAGGAAGAAAGAGGGAAAG+GGG + Chr2:71698664-71698683 None:intergenic 45.0%
GAGCAAGATTACATGGAACG+GGG + Chr2:71699654-71699673 None:intergenic 45.0%
GCAAATGGAAATGCTTGGAG+GGG - Chr2:71699886-71699905 MsG0280010577.01.T01:intron 45.0%
GGCAAATGGAAATGCTTGGA+GGG - Chr2:71699885-71699904 MsG0280010577.01.T01:intron 45.0%
GGCTTAACAACAGTTAGTGG+TGG - Chr2:71697961-71697980 MsG0280010577.01.T01:three_prime_UTR 45.0%
GGGCCATCTTCTAAGTTACT+TGG + Chr2:71701179-71701198 None:intergenic 45.0%
GTAGAGTGGCACCTAAAGAT+AGG - Chr2:71699454-71699473 MsG0280010577.01.T01:intron 45.0%
TATGCTTCTTGGAGACCAAC+GGG - Chr2:71699318-71699337 MsG0280010577.01.T01:CDS 45.0%
TCACGTAACCCACGTAATCA+CGG + Chr2:71697855-71697874 None:intergenic 45.0%
TCAGCATCATTTGCTCCAAC+TGG + Chr2:71700323-71700342 None:intergenic 45.0%
TGGCAAATGGAAATGCTTGG+AGG - Chr2:71699884-71699903 MsG0280010577.01.T01:intron 45.0%
TTTGTGGCGCATTTGGCAAA+TGG - Chr2:71699871-71699890 MsG0280010577.01.T01:intron 45.0%
! GAGCTGATGACCTATTTCTC+TGG + Chr2:71700424-71700443 None:intergenic 45.0%
! TTTTATCGTGCAGGTGTCAG+AGG - Chr2:71699933-71699952 MsG0280010577.01.T01:intron 45.0%
!! AGATAACTGGCCTTGTAGAG+TGG - Chr2:71699440-71699459 MsG0280010577.01.T01:intron 45.0%
!! AGCTCAACTGGTTTGAGCTA+AGG + Chr2:71701592-71701611 None:intergenic 45.0%
!! GCTCAACTGGTTTGAGCTAA+GGG + Chr2:71701591-71701610 None:intergenic 45.0%
!! GGGCTTTTGTTGTGTGTGTT+TGG + Chr2:71698644-71698663 None:intergenic 45.0%
!! GTAAGAAGAGTGGACTGTGT+GGG + Chr2:71698607-71698626 None:intergenic 45.0%
!! TCTTTAGGTGCCACTCTACA+AGG + Chr2:71699453-71699472 None:intergenic 45.0%
!! TGAGTGTTGGCCTATCTTGA+AGG + Chr2:71699550-71699569 None:intergenic 45.0%
!! TTCGGTGCTAGCCTATCTTT+AGG + Chr2:71699468-71699487 None:intergenic 45.0%
!!! TCAGCTGCTGCTTTTGTTGA+AGG - Chr2:71698984-71699003 MsG0280010577.01.T01:CDS 45.0%
ACCTGGTCAGTTTGAACTGG+AGG + Chr2:71700587-71700606 None:intergenic 50.0%
ACTGACCAGGTTTCTGCTTC+AGG - Chr2:71700596-71700615 MsG0280010577.01.T01:intron 50.0%
AGGTTTCTGCTTCAGGGTCT+GGG - Chr2:71700603-71700622 MsG0280010577.01.T01:intron 50.0%
ATCACTTGAGGAAACCCCGT+TGG + Chr2:71699336-71699355 None:intergenic 50.0%
ATGCTTCTTGGAGACCAACG+GGG - Chr2:71699319-71699338 MsG0280010577.01.T01:CDS 50.0%
CAGAACATGTTAGGGGGGTT+GGG + Chr2:71701616-71701635 None:intergenic 50.0%
CATCCTAATTCGCCTCCCAT+GGG - Chr2:71700476-71700495 MsG0280010577.01.T01:intron 50.0%
CATCGACAGCGATCCTTCTA+CGG - Chr2:71699058-71699077 MsG0280010577.01.T01:CDS 50.0%
CGCCATATTGCTAGAAGGGA+AGG - Chr2:71700398-71700417 MsG0280010577.01.T01:intron 50.0%
CGGGGTTTCCTCAAGTGATA+TGG - Chr2:71699337-71699356 MsG0280010577.01.T01:CDS 50.0%
CGGTGTAATTACCTCGTCCA+TGG + Chr2:71698727-71698746 None:intergenic 50.0%
CTGACCAGGTTTCTGCTTCA+GGG - Chr2:71700597-71700616 MsG0280010577.01.T01:intron 50.0%
GAAGGGAAGGCCAGAGAAAT+AGG - Chr2:71700411-71700430 MsG0280010577.01.T01:intron 50.0%
GACGAGTCTTTCACCTTACG+CGG + Chr2:71697915-71697934 None:intergenic 50.0%
GAGCACGCCATATTGCTAGA+AGG - Chr2:71700393-71700412 MsG0280010577.01.T01:intron 50.0%
GATCTCGTACAGTTGCCAGT+TGG - Chr2:71700305-71700324 MsG0280010577.01.T01:intron 50.0%
GGAACTAAAGTGAGCTGTGG+TGG + Chr2:71700566-71700585 None:intergenic 50.0%
GGAAGGAAAGGTGGTTCTCT+CGG - Chr2:71701027-71701046 MsG0280010577.01.T01:intron 50.0%
GGAGGAACTAAAGTGAGCTG+TGG + Chr2:71700569-71700588 None:intergenic 50.0%
GGATGTGGTGCATTGCCTAT+TGG - Chr2:71701999-71702018 MsG0280010577.01.T01:intron 50.0%
GGCCTTCCCTTCTAGCAATA+TGG + Chr2:71700403-71700422 None:intergenic 50.0%
GGTGTACACCGTGATTACGT+GGG - Chr2:71697844-71697863 MsG0280010577.01.T01:three_prime_UTR 50.0%
GTGGACCAAGACTTAGCCAA+AGG - Chr2:71697980-71697999 MsG0280010577.01.T01:three_prime_UTR 50.0%
TATTCCACCAGAATGCCACG+TGG - Chr2:71697940-71697959 MsG0280010577.01.T01:three_prime_UTR 50.0%
TCAAGGTCGCCCACAGTATT+TGG - Chr2:71700442-71700461 MsG0280010577.01.T01:intron 50.0%
TCAGAACATGTTAGGGGGGT+TGG + Chr2:71701617-71701636 None:intergenic 50.0%
TCATCCTAATTCGCCTCCCA+TGG - Chr2:71700475-71700494 MsG0280010577.01.T01:intron 50.0%
TCCTCCAGTTCAAACTGACC+AGG - Chr2:71700583-71700602 MsG0280010577.01.T01:intron 50.0%
TGCAACTGTGTCACGCATGA+TGG - Chr2:71701106-71701125 MsG0280010577.01.T01:CDS 50.0%
TGCCGTGTCTACAAGGTAGT+TGG - Chr2:71700881-71700900 MsG0280010577.01.T01:intron 50.0%
TGTCTTTGCTCATTGCAGCC+AGG - Chr2:71700107-71700126 MsG0280010577.01.T01:intron 50.0%
TGTTAAGCCACGTGGCATTC+TGG + Chr2:71697950-71697969 None:intergenic 50.0%
TTGAGAGAGAGCGGAACATC+AGG - Chr2:71700145-71700164 MsG0280010577.01.T01:intron 50.0%
! TCCGATTTTCTCCATGGACG+AGG - Chr2:71698713-71698732 MsG0280010577.01.T01:intron 50.0%
! TTTCCAAGAGCACAAGAGGG+TGG - Chr2:71701006-71701025 MsG0280010577.01.T01:intron 50.0%
!! GGTAAGAAGAGTGGACTGTG+TGG + Chr2:71698608-71698627 None:intergenic 50.0%
!! GTGTTTGGTGCGGTGATGTA+AGG + Chr2:71698629-71698648 None:intergenic 50.0%
!!! GCTGCTGCTTTTGTTGAAGG+TGG - Chr2:71698987-71699006 MsG0280010577.01.T01:CDS 50.0%
ATTGCCAACACATGGGGCAC+TGG + Chr2:71699964-71699983 None:intergenic 55.0%
CAACTGCCTCGAGCAATTCC+TGG + Chr2:71700128-71700147 None:intergenic 55.0%
CAAGAGGGTGGAAGGAAAGG+TGG - Chr2:71701018-71701037 MsG0280010577.01.T01:intron 55.0%
CAGACCCTGAAGCAGAAACC+TGG + Chr2:71700604-71700623 None:intergenic 55.0%
CAGGTTTCTGCTTCAGGGTC+TGG - Chr2:71700602-71700621 MsG0280010577.01.T01:intron 55.0%
CCAAGTAGCCAAGACAGAGC+AGG - Chr2:71700810-71700829 MsG0280010577.01.T01:intron 55.0%
CCTGCTCTGTCTTGGCTACT+TGG + Chr2:71700813-71700832 None:intergenic 55.0%
CGGTGTACACCGTGATTACG+TGG - Chr2:71697843-71697862 MsG0280010577.01.T01:three_prime_UTR 55.0%
CTGATGGTCCTGCTCTGTCT+TGG + Chr2:71700821-71700840 None:intergenic 55.0%
CTTCCACCCTCTTGTGCTCT+TGG + Chr2:71701012-71701031 None:intergenic 55.0%
GAGGAAGAAGCAGGACCCAT+GGG + Chr2:71700494-71700513 None:intergenic 55.0%
GCACAAGAGGGTGGAAGGAA+AGG - Chr2:71701015-71701034 MsG0280010577.01.T01:intron 55.0%
TAAGCCACGTGGCATTCTGG+TGG + Chr2:71697947-71697966 None:intergenic 55.0%
TCGAGGCAGTTGAGAGAGAG+CGG - Chr2:71700136-71700155 MsG0280010577.01.T01:intron 55.0%
TTGCAGCCAGGAATTGCTCG+AGG - Chr2:71700119-71700138 MsG0280010577.01.T01:intron 55.0%
TTTGCTGCTGCCGCAGCAAT+GGG - Chr2:71700368-71700387 MsG0280010577.01.T01:intron 55.0%
! CAAGAGCACAAGAGGGTGGA+AGG - Chr2:71701010-71701029 MsG0280010577.01.T01:intron 55.0%
! GTCACGCATGATGGAACGCT+TGG - Chr2:71701115-71701134 MsG0280010577.01.T01:CDS 55.0%
! TTGCCAACACATGGGGCACT+GGG + Chr2:71699963-71699982 None:intergenic 55.0%
CTGCGGCAGCAGCAAAGTGT+TGG + Chr2:71700364-71700383 None:intergenic 60.0%
CTTCCTCCCCACCTCAGAGA+GGG - Chr2:71700507-71700526 MsG0280010577.01.T01:intron 60.0%
CTTTGCTGCTGCCGCAGCAA+TGG - Chr2:71700367-71700386 MsG0280010577.01.T01:intron 60.0%
GAAGAAGCAGGACCCATGGG+AGG + Chr2:71700491-71700510 None:intergenic 60.0%
GAGCTGTGGTGGTTCTTCCC+CGG + Chr2:71700555-71700574 None:intergenic 60.0%
GGACCCATGGGAGGCGAATT+AGG + Chr2:71700482-71700501 None:intergenic 60.0%
GGAGGAAGAAGCAGGACCCA+TGG + Chr2:71700495-71700514 None:intergenic 60.0%
GGTGAACCAACTCCTGCGAC+CGG - Chr2:71700533-71700552 MsG0280010577.01.T01:intron 60.0%
GGTTCACCATCCCCTCTCTG+AGG + Chr2:71700521-71700540 None:intergenic 60.0%
GTGAACCAACTCCTGCGACC+GGG - Chr2:71700534-71700553 MsG0280010577.01.T01:intron 60.0%
TCTTCCTCCCCACCTCAGAG+AGG - Chr2:71700506-71700525 MsG0280010577.01.T01:intron 60.0%
TGAACCAACTCCTGCGACCG+GGG - Chr2:71700535-71700554 MsG0280010577.01.T01:intron 60.0%
TGAGGTGGGGAGGAAGAAGC+AGG + Chr2:71700503-71700522 None:intergenic 60.0%
TTCCTCCCCACCTCAGAGAG+GGG - Chr2:71700508-71700527 MsG0280010577.01.T01:intron 60.0%
TTGCTGCTGCCGCAGCAATG+GGG - Chr2:71700369-71700388 MsG0280010577.01.T01:intron 60.0%
! TCACCATCCCCTCTCTGAGG+TGG + Chr2:71700518-71700537 None:intergenic 60.0%
!! ACCATCCCCTCTCTGAGGTG+GGG + Chr2:71700516-71700535 None:intergenic 60.0%
!! CACCATCCCCTCTCTGAGGT+GGG + Chr2:71700517-71700536 None:intergenic 60.0%
GCTCCCAGTGCCCCATGTGT+TGG - Chr2:71699957-71699976 MsG0280010577.01.T01:intron 65.0%
GGGGGGTTGGGTAGCTCAAC+TGG + Chr2:71701604-71701623 None:intergenic 65.0%
TCCCCACCTCAGAGAGGGGA+TGG - Chr2:71700512-71700531 MsG0280010577.01.T01:intron 65.0%
TCTTCCCCGGTCGCAGGAGT+TGG + Chr2:71700542-71700561 None:intergenic 65.0%
!! ATCCCCTCTCTGAGGTGGGG+AGG + Chr2:71700513-71700532 None:intergenic 65.0%
GCGTGCTCGCCCCATTGCTG+CGG + Chr2:71700381-71700400 None:intergenic 70.0%
GGTGGTTCTTCCCCGGTCGC+AGG + Chr2:71700548-71700567 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 71697833 71702315 71697833 ID=MsG0280010577.01;Name=MsG0280010577.01
Chr2 mRNA 71697833 71702315 71697833 ID=MsG0280010577.01.T01;Parent=MsG0280010577.01;Name=MsG0280010577.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0.66|0.71|0.85|0.5|0.42|7|403|339
Chr2 exon 71697833 71698189 71697833 ID=MsG0280010577.01.T01:exon:6884;Parent=MsG0280010577.01.T01
Chr2 exon 71698798 71699156 71698798 ID=MsG0280010577.01.T01:exon:6883;Parent=MsG0280010577.01.T01
Chr2 exon 71699253 71699360 71699253 ID=MsG0280010577.01.T01:exon:6882;Parent=MsG0280010577.01.T01
Chr2 exon 71699476 71699831 71699476 ID=MsG0280010577.01.T01:exon:6881;Parent=MsG0280010577.01.T01
Chr2 exon 71700908 71700973 71700908 ID=MsG0280010577.01.T01:exon:6880;Parent=MsG0280010577.01.T01
Chr2 exon 71701069 71701212 71701069 ID=MsG0280010577.01.T01:exon:6879;Parent=MsG0280010577.01.T01
Chr2 exon 71702283 71702315 71702283 ID=MsG0280010577.01.T01:exon:6878;Parent=MsG0280010577.01.T01
Chr2 CDS 71702283 71702315 71702283 ID=MsG0280010577.01.T01:cds;Parent=MsG0280010577.01.T01
Chr2 CDS 71701069 71701212 71701069 ID=MsG0280010577.01.T01:cds;Parent=MsG0280010577.01.T01
Chr2 CDS 71700908 71700973 71700908 ID=MsG0280010577.01.T01:cds;Parent=MsG0280010577.01.T01
Chr2 CDS 71699476 71699831 71699476 ID=MsG0280010577.01.T01:cds;Parent=MsG0280010577.01.T01
Chr2 CDS 71699253 71699360 71699253 ID=MsG0280010577.01.T01:cds;Parent=MsG0280010577.01.T01
Chr2 CDS 71698844 71699156 71698844 ID=MsG0280010577.01.T01:cds;Parent=MsG0280010577.01.T01
Chr2 three_prime_UTR 71698798 71698843 71698798 ID=MsG0280010577.01.T01:three_prime_utr;Parent=MsG0280010577.01.T01
Chr2 three_prime_UTR 71697833 71698189 71697833 ID=MsG0280010577.01.T01:three_prime_utr;Parent=MsG0280010577.01.T01
Gene Sequence

>MsG0280010577.01.T01

ATGAAGGTGGCGGTGTACACCGTGATTACGTGGGTTCCTGTGATTGAAGAGAATGAAACAAAGTCTGAGGCGCATTTGACTTCAGCTGCTGCTTTTGTTGAAGGTGGAATTCAGGATGCTTGTGATGATTCTTGTAGTATATGTCTTGAAGAATTCATCGACAGCGATCCTTCTACGGTGACAAGTTGCAAGCATGAGTTTCATCTTCAATGTATTCTCGAATGGTATTGCCTTTATTCGTCTTTGCCAGTTGGAGCAAATGATGCTGATCTTGAAGAGCGTATTCTCCAACACTTTGCTGCTGCCGCAGCAATGGGGCGAGCACGCCATATTGCTAGAAGGGAAGGCCAGAGAAATAGGTCATCAGCTCAAGGTCGCCCACAGTATTTGGTATTTTCAGCTCATCCTAATTCGCCTCCCATGGGTCCTGCTTCTTCCTCCCCACCTCAGAGAGGGGATGGTGAACCAACTCCTGCGACCGGGGAAGAACCACCACAGCTCACTTTAGTTCCTCCAGTTCAAACTGACCAGGTTTCTGCTTCAGGGTCTGGGTCTGCTGCTGTTGCTACTGATAATCAGGGATTATATTATAACAGCAGGAGATCTCCTAATCAGTCTTCTCCAAGTAGCCAAGACAGAGCAGGACCATCAGAACTCCAGTCATTTTCAGAATCTCTGAAATCTAAACTAAATGCCGTGTCTACAAGATACAAAGAGTCAATTTCCAAGAGCACAAGAGGGTGGAAGGAAAGGTGGTTCTCTCGGACTAGCCCTATGTCTGATCTTGGATCTGAAGTTAAGCGAGAAGTTAATGCAGGGATTGCAACTGTGTCACGCATGATGGAACGCTTGGAGACCAGAGACAATAATAGAAGCAGTAGCGATACTGCTCCAAGTAACTTAGAAGATGGCCCAATTCAGGGATCAAGTGATCAGCATTTAACAGACACTGAAAGGGGCAGTCCTTTGAGAGACAATAACTCAAAAACATCTTGCACTGCAGGTTCTAGTTCAAATTAA
Protein sequence

>MsG0280010577.01.T01

MKVAVYTVITWVPVIEENETKSEAHLTSAAAFVEGGIQDACDDSCSICLEEFIDSDPSTVTSCKHEFHLQCILEWYCLYSSLPVGANDADLEERILQHFAAAAAMGRARHIARREGQRNRSSAQGRPQYLVFSAHPNSPPMGPASSSPPQRGDGEPTPATGEEPPQLTLVPPVQTDQVSASGSGSAAVATDNQGLYYNSRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTRGWKERWFSRTSPMSDLGSEVKREVNAGIATVSRMMERLETRDNNRSSSDTAPSNLEDGPIQGSSDQHLTDTERGSPLRDNNSKTSCTAGSSSN*