Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010642.01.T01 | XP_003597068.1 | 90.558 | 233 | 19 | 2 | 1 | 230 | 1 | 233 | 1.88E-117 | 344 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010642.01.T01 | G7IRL0 | 90.558 | 233 | 19 | 2 | 1 | 230 | 1 | 233 | 8.99e-118 | 344 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0280010642.01 | MsG0880043763.01 | 0.894738 | 1.858638e-75 | 1.871654e-71 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010642.01.T01 | MTR_2g089310 | 90.558 | 233 | 19 | 2 | 1 | 230 | 1 | 233 | 2.28e-121 | 344 |
MsG0280010642.01.T01 | MTR_2g011450 | 47.586 | 145 | 49 | 2 | 1 | 145 | 1 | 118 | 2.40e-31 | 112 |
MsG0280010642.01.T01 | MTR_4g046640 | 50.847 | 59 | 29 | 0 | 5 | 63 | 36 | 94 | 1.35e-12 | 63.2 |
MsG0280010642.01.T01 | MTR_4g008050 | 50.000 | 66 | 33 | 0 | 3 | 68 | 6 | 71 | 3.06e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010642.01.T01 | AT4G27310 | 42.197 | 173 | 56 | 3 | 1 | 138 | 1 | 164 | 9.44e-36 | 126 |
MsG0280010642.01.T01 | AT5G54470 | 47.059 | 187 | 78 | 4 | 2 | 188 | 3 | 168 | 5.11e-34 | 121 |
MsG0280010642.01.T01 | AT3G21890 | 56.000 | 50 | 22 | 0 | 5 | 54 | 31 | 80 | 8.94e-11 | 58.2 |
Find 71 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGGATGAGGTTGGTTTGAT+AGG | 0.262299 | 2:+72738767 | MsG0280010642.01.T01:CDS |
CGGCGGTATAGCGACGTAAA+TGG | 0.305299 | 2:+72738824 | MsG0280010642.01.T01:CDS |
TTCACTTTCTTCTTGTTGCT+CGG | 0.346480 | 2:-72738340 | None:intergenic |
TTCTTCTTGTTGCTCGGCGC+TGG | 0.356031 | 2:-72738334 | None:intergenic |
TTACAAAATTAATAATCATA+TGG | 0.382752 | 2:-72739162 | None:intergenic |
ACGAAACCGCGTTGAGAGAA+AGG | 0.398885 | 2:+72738026 | MsG0280010642.01.T01:five_prime_UTR |
ATGTTGGGACTGCGATTCTA+AGG | 0.399501 | 2:+72738137 | MsG0280010642.01.T01:CDS |
TGAAGAAGATGGTGATAATC+AGG | 0.403542 | 2:+72738425 | MsG0280010642.01.T01:CDS |
CGCATCGCCGCCTTTGACGA+CGG | 0.405274 | 2:-72738803 | None:intergenic |
TTCCTCATCGGAATCGTAAT+CGG | 0.408569 | 2:-72738388 | None:intergenic |
TGGATGAGGTTGGTTTGATA+GGG | 0.423166 | 2:+72738768 | MsG0280010642.01.T01:CDS |
CTCGGCGCTGGCACCGGCGT+TGG | 0.429781 | 2:-72738322 | None:intergenic |
CCACCGGCTTCGAGTTCTTC+CGG | 0.435713 | 2:+72738480 | MsG0280010642.01.T01:CDS |
TTTCTTGTGATGGTTTGGTA+TGG | 0.436961 | 2:-72737944 | None:intergenic |
CGTGGAAAGCCTCCGGCGCT+AGG | 0.440306 | 2:+72738232 | MsG0280010642.01.T01:CDS |
TTGTTGCTCGGCGCTGGCAC+CGG | 0.453269 | 2:-72738328 | None:intergenic |
GATTATGGTTGTGGCCTTGT+GGG | 0.456916 | 2:+72739028 | MsG0280010642.01.T01:three_prime_UTR |
TGTTTATATAACTTAGGTAA+AGG | 0.465810 | 2:+72739107 | MsG0280010642.01.T01:three_prime_UTR |
CGGTAGCGATGAGTCGGTTA+CGG | 0.474621 | 2:+72738500 | MsG0280010642.01.T01:CDS |
GGTTTGGTATGGATGAAGAA+TGG | 0.486262 | 2:-72737933 | None:intergenic |
GTTTGGTATGGATGAAGAAT+GGG | 0.493335 | 2:-72737932 | None:intergenic |
CGCGTTACCGAGCCTAGCGC+CGG | 0.498391 | 2:-72738244 | None:intergenic |
CGACCAGGCTAGCTTATGTT+GGG | 0.515990 | 2:+72738122 | MsG0280010642.01.T01:CDS |
CGAAGAGAGGTGGATGAGGT+TGG | 0.516662 | 2:+72738758 | MsG0280010642.01.T01:CDS |
GCCAACGCTAACTCCAACGC+CGG | 0.517678 | 2:+72738309 | MsG0280010642.01.T01:CDS |
ATAATATCTCTAATATAGTA+CGG | 0.521383 | 2:-72738877 | None:intergenic |
CTCGTCCTCATCTTCCTCAT+CGG | 0.523137 | 2:-72738400 | None:intergenic |
CCCACGCCGTGGAAAGCCTC+CGG | 0.526413 | 2:+72738225 | MsG0280010642.01.T01:CDS |
GACTCACAGAAAGTTCTAGC+TGG | 0.526494 | 2:-72738099 | None:intergenic |
ACCGGCGTTGGAGTTAGCGT+TGG | 0.527253 | 2:-72738310 | None:intergenic |
AGTCCCAACATAAGCTAGCC+TGG | 0.529010 | 2:-72738125 | None:intergenic |
CCGACCAGGCTAGCTTATGT+TGG | 0.529135 | 2:+72738121 | MsG0280010642.01.T01:CDS |
GAGGACGAGGATGAAGAAGA+TGG | 0.529527 | 2:+72738414 | MsG0280010642.01.T01:CDS |
AACTTTCTGTGAGTCCGACC+AGG | 0.531925 | 2:+72738107 | MsG0280010642.01.T01:CDS |
GCCGGAGGCTTTCCACGGCG+TGG | 0.543692 | 2:-72738226 | None:intergenic |
CGATGAGGAAGATGAGGACG+AGG | 0.544127 | 2:+72738401 | MsG0280010642.01.T01:CDS |
CGACGAGGAACCGTCGTCAA+AGG | 0.547277 | 2:+72738793 | MsG0280010642.01.T01:CDS |
GAAGAACTCGAAGCCGGTGG+TGG | 0.549423 | 2:-72738477 | None:intergenic |
CGTCAAAGGCGGCGATGCGG+CGG | 0.550222 | 2:+72738807 | MsG0280010642.01.T01:CDS |
AAAGCCTCCGGCGCTAGGCT+CGG | 0.551924 | 2:+72738237 | MsG0280010642.01.T01:CDS |
AACAGCGGCGCAACCACCAC+CGG | 0.553693 | 2:+72738464 | MsG0280010642.01.T01:CDS |
GTTACCGAGCCTAGCGCCGG+AGG | 0.559866 | 2:-72738241 | None:intergenic |
GGATTATGGTTGTGGCCTTG+TGG | 0.566677 | 2:+72739027 | MsG0280010642.01.T01:three_prime_UTR |
CCGGAGGCTTTCCACGGCGT+GGG | 0.569147 | 2:-72738225 | None:intergenic |
CATTCTCAGCCACACGATTG+AGG | 0.570452 | 2:+72738854 | MsG0280010642.01.T01:CDS |
CGTAACCGACTCATCGCTAC+CGG | 0.571656 | 2:-72738499 | None:intergenic |
CTAGCGCCGGAGGCTTTCCA+CGG | 0.572274 | 2:-72738231 | None:intergenic |
TCAACGAAGAGAGGTGGATG+AGG | 0.575020 | 2:+72738754 | MsG0280010642.01.T01:CDS |
TTCTTCCGGTAGCGATGAGT+CGG | 0.577433 | 2:+72738494 | MsG0280010642.01.T01:CDS |
CGTTGGAGTTAGCGTTGGCG+TGG | 0.586469 | 2:-72738305 | None:intergenic |
TCGTTGTGTGATAGATGCGC+CGG | 0.591718 | 2:+72738270 | MsG0280010642.01.T01:CDS |
CGAGGAACCGTCGTCAAAGG+CGG | 0.613549 | 2:+72738796 | MsG0280010642.01.T01:CDS |
CGATTCCGATGAGGAAGATG+AGG | 0.616964 | 2:+72738395 | MsG0280010642.01.T01:CDS |
CTACCGGAAGAACTCGAAGC+CGG | 0.624941 | 2:-72738483 | None:intergenic |
GAGATTGACATGCGTGACAG+AGG | 0.627483 | 2:-72738203 | None:intergenic |
CCAACATAAGCTAGCCTGGT+CGG | 0.628810 | 2:-72738121 | None:intergenic |
CGTCGTCAAAGGCGGCGATG+CGG | 0.629213 | 2:+72738804 | MsG0280010642.01.T01:CDS |
GTATAGCGACGTAAATGGAA+CGG | 0.632422 | 2:+72738829 | MsG0280010642.01.T01:CDS |
CATGTCAATCTCCCACGCCG+TGG | 0.644127 | 2:+72738214 | MsG0280010642.01.T01:CDS |
ATAGTACGGCCTCAATCGTG+TGG | 0.647407 | 2:-72738863 | None:intergenic |
CCGGAAGAACTCGAAGCCGG+TGG | 0.652243 | 2:-72738480 | None:intergenic |
TACTAAGCTAATCACCCACA+AGG | 0.661266 | 2:-72739042 | None:intergenic |
TTGTGTGATAGATGCGCCGG+CGG | 0.662123 | 2:+72738273 | MsG0280010642.01.T01:CDS |
GTGATAATCAGGTTGTGCCG+TGG | 0.677277 | 2:+72738436 | MsG0280010642.01.T01:CDS |
GAGCAACAAGAAGAAAGTGA+AGG | 0.680813 | 2:+72738342 | MsG0280010642.01.T01:CDS |
CACCGATTACGATTCCGATG+AGG | 0.696165 | 2:+72738386 | MsG0280010642.01.T01:CDS |
TGCGCCGCTGTTGATGACCA+CGG | 0.697626 | 2:-72738453 | None:intergenic |
TGGTTTGATAGGGTGCGACG+AGG | 0.704245 | 2:+72738778 | MsG0280010642.01.T01:CDS |
TGTGCCGTGGTCATCAACAG+CGG | 0.705571 | 2:+72738449 | MsG0280010642.01.T01:CDS |
GTGCAACGATAACCACGATG+AGG | 0.723607 | 2:+72738530 | MsG0280010642.01.T01:CDS |
ACTTAGAAATAACCTCATCG+TGG | 0.742114 | 2:-72738542 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTACAAAATTAATAATCATA+TGG | - | Chr2:72739165-72739184 | None:intergenic | 10.0% |
!! | ATAATATCTCTAATATAGTA+CGG | - | Chr2:72738880-72738899 | None:intergenic | 15.0% |
!!! | TTATTTTATTTGTAATCTCT+TGG | + | Chr2:72738896-72738915 | MsG0280010642.01.T01:three_prime_UTR | 15.0% |
!!! | TTTTCTTGTTTATATAACTT+AGG | + | Chr2:72739101-72739120 | MsG0280010642.01.T01:three_prime_UTR | 15.0% |
!!! | TTTTTTGTTTTGATATTTTG+AGG | + | Chr2:72739006-72739025 | MsG0280010642.01.T01:three_prime_UTR | 15.0% |
!! | TGTTTATATAACTTAGGTAA+AGG | + | Chr2:72739107-72739126 | MsG0280010642.01.T01:three_prime_UTR | 20.0% |
!!! | ATTTGTGAATTTTGTTTTTG+CGG | - | Chr2:72737997-72738016 | None:intergenic | 20.0% |
!!! | TTTTGATATTTTGAGGATTA+TGG | + | Chr2:72739013-72739032 | MsG0280010642.01.T01:three_prime_UTR | 20.0% |
!!! | TTTTTGTTGATTTTGTTTTC+AGG | + | Chr2:72738706-72738725 | MsG0280010642.01.T01:intron | 20.0% |
!!! | TTGATTTTGTTTTCAGGTTA+CGG | + | Chr2:72738712-72738731 | MsG0280010642.01.T01:intron | 25.0% |
AGGTTACGGATTCAAAAAAT+TGG | + | Chr2:72738726-72738745 | MsG0280010642.01.T01:intron | 30.0% | |
! | TCGTTTAGATCATGATTTTC+AGG | + | Chr2:72738593-72738612 | MsG0280010642.01.T01:CDS | 30.0% |
!! | TATTTTGAGGATTATGGTTG+TGG | + | Chr2:72739019-72739038 | MsG0280010642.01.T01:three_prime_UTR | 30.0% |
ACTTAGAAATAACCTCATCG+TGG | - | Chr2:72738545-72738564 | None:intergenic | 35.0% | |
GTTTGGTATGGATGAAGAAT+GGG | - | Chr2:72737935-72737954 | None:intergenic | 35.0% | |
TGAAGAAGATGGTGATAATC+AGG | + | Chr2:72738425-72738444 | MsG0280010642.01.T01:CDS | 35.0% | |
TTCACTTTCTTCTTGTTGCT+CGG | - | Chr2:72738343-72738362 | None:intergenic | 35.0% | |
TTGGAAAAATCAACGAAGAG+AGG | + | Chr2:72738745-72738764 | MsG0280010642.01.T01:CDS | 35.0% | |
! | TCTCTTTTCTTGTGATGGTT+TGG | - | Chr2:72737952-72737971 | None:intergenic | 35.0% |
! | TTCTCTCTCTTTTCTTGTGA+TGG | - | Chr2:72737957-72737976 | None:intergenic | 35.0% |
! | TTTGCGGAATTTTCGTGTTT+GGG | - | Chr2:72737981-72738000 | None:intergenic | 35.0% |
! | TTTTGCGGAATTTTCGTGTT+TGG | - | Chr2:72737982-72738001 | None:intergenic | 35.0% |
!! | TCGCAGTTCTTTTTCATGAT+CGG | - | Chr2:72738066-72738085 | None:intergenic | 35.0% |
!! | TTTCTTGTGATGGTTTGGTA+TGG | - | Chr2:72737947-72737966 | None:intergenic | 35.0% |
GAAAAATCAACGAAGAGAGG+TGG | + | Chr2:72738748-72738767 | MsG0280010642.01.T01:CDS | 40.0% | |
GAGCAACAAGAAGAAAGTGA+AGG | + | Chr2:72738342-72738361 | MsG0280010642.01.T01:CDS | 40.0% | |
GTATAGCGACGTAAATGGAA+CGG | + | Chr2:72738829-72738848 | MsG0280010642.01.T01:CDS | 40.0% | |
TACTAAGCTAATCACCCACA+AGG | - | Chr2:72739045-72739064 | None:intergenic | 40.0% | |
TTCCTCATCGGAATCGTAAT+CGG | - | Chr2:72738391-72738410 | None:intergenic | 40.0% | |
! | GATTTTCCTTTCTCTCAACG+CGG | - | Chr2:72738035-72738054 | None:intergenic | 40.0% |
! | GGTTTGGTATGGATGAAGAA+TGG | - | Chr2:72737936-72737955 | None:intergenic | 40.0% |
!! | TGGATGAGGTTGGTTTGATA+GGG | + | Chr2:72738768-72738787 | MsG0280010642.01.T01:CDS | 40.0% |
ATGTTGGGACTGCGATTCTA+AGG | + | Chr2:72738137-72738156 | MsG0280010642.01.T01:CDS | 45.0% | |
CAACCAAAAAGTTAGCAGCG+TGG | - | Chr2:72738164-72738183 | None:intergenic | 45.0% | |
! | GACTCACAGAAAGTTCTAGC+TGG | - | Chr2:72738102-72738121 | None:intergenic | 45.0% |
!! | GATTATGGTTGTGGCCTTGT+GGG | + | Chr2:72739028-72739047 | MsG0280010642.01.T01:three_prime_UTR | 45.0% |
!! | GTGGATGAGGTTGGTTTGAT+AGG | + | Chr2:72738767-72738786 | MsG0280010642.01.T01:CDS | 45.0% |
AACTTTCTGTGAGTCCGACC+AGG | + | Chr2:72738107-72738126 | MsG0280010642.01.T01:CDS | 50.0% | |
ACGAAACCGCGTTGAGAGAA+AGG | + | Chr2:72738026-72738045 | MsG0280010642.01.T01:five_prime_UTR | 50.0% | |
AGTCCCAACATAAGCTAGCC+TGG | - | Chr2:72738128-72738147 | None:intergenic | 50.0% | |
ATAGTACGGCCTCAATCGTG+TGG | - | Chr2:72738866-72738885 | None:intergenic | 50.0% | |
CATTCTCAGCCACACGATTG+AGG | + | Chr2:72738854-72738873 | MsG0280010642.01.T01:CDS | 50.0% | |
CGATTCCGATGAGGAAGATG+AGG | + | Chr2:72738395-72738414 | MsG0280010642.01.T01:CDS | 50.0% | |
CTCGTCCTCATCTTCCTCAT+CGG | - | Chr2:72738403-72738422 | None:intergenic | 50.0% | |
GAGATTGACATGCGTGACAG+AGG | - | Chr2:72738206-72738225 | None:intergenic | 50.0% | |
GAGGACGAGGATGAAGAAGA+TGG | + | Chr2:72738414-72738433 | MsG0280010642.01.T01:CDS | 50.0% | |
GTGCAACGATAACCACGATG+AGG | + | Chr2:72738530-72738549 | MsG0280010642.01.T01:CDS | 50.0% | |
TCAACGAAGAGAGGTGGATG+AGG | + | Chr2:72738754-72738773 | MsG0280010642.01.T01:CDS | 50.0% | |
TCGTTGTGTGATAGATGCGC+CGG | + | Chr2:72738270-72738289 | MsG0280010642.01.T01:CDS | 50.0% | |
TTCTTCCGGTAGCGATGAGT+CGG | + | Chr2:72738494-72738513 | MsG0280010642.01.T01:CDS | 50.0% | |
! | CACCGATTACGATTCCGATG+AGG | + | Chr2:72738386-72738405 | MsG0280010642.01.T01:CDS | 50.0% |
! | CCAACATAAGCTAGCCTGGT+CGG | - | Chr2:72738124-72738143 | None:intergenic | 50.0% |
! | GGATTATGGTTGTGGCCTTG+TGG | + | Chr2:72739027-72739046 | MsG0280010642.01.T01:three_prime_UTR | 50.0% |
! | GGTCCACGCTGCTAACTTTT+TGG | + | Chr2:72738158-72738177 | MsG0280010642.01.T01:CDS | 50.0% |
! | GTGATAATCAGGTTGTGCCG+TGG | + | Chr2:72738436-72738455 | MsG0280010642.01.T01:CDS | 50.0% |
!! | CGACCAGGCTAGCTTATGTT+GGG | + | Chr2:72738122-72738141 | MsG0280010642.01.T01:CDS | 50.0% |
CGAAGAGAGGTGGATGAGGT+TGG | + | Chr2:72738758-72738777 | MsG0280010642.01.T01:CDS | 55.0% | |
CGATGAGGAAGATGAGGACG+AGG | + | Chr2:72738401-72738420 | MsG0280010642.01.T01:CDS | 55.0% | |
CGGCGGTATAGCGACGTAAA+TGG | + | Chr2:72738824-72738843 | MsG0280010642.01.T01:CDS | 55.0% | |
CGGTAGCGATGAGTCGGTTA+CGG | + | Chr2:72738500-72738519 | MsG0280010642.01.T01:CDS | 55.0% | |
CTACCGGAAGAACTCGAAGC+CGG | - | Chr2:72738486-72738505 | None:intergenic | 55.0% | |
TGGTTTGATAGGGTGCGACG+AGG | + | Chr2:72738778-72738797 | MsG0280010642.01.T01:CDS | 55.0% | |
TGTGCCGTGGTCATCAACAG+CGG | + | Chr2:72738449-72738468 | MsG0280010642.01.T01:CDS | 55.0% | |
TTCTTCTTGTTGCTCGGCGC+TGG | - | Chr2:72738337-72738356 | None:intergenic | 55.0% | |
TTGTGTGATAGATGCGCCGG+CGG | + | Chr2:72738273-72738292 | MsG0280010642.01.T01:CDS | 55.0% | |
! | CGTAACCGACTCATCGCTAC+CGG | - | Chr2:72738502-72738521 | None:intergenic | 55.0% |
!! | CCGACCAGGCTAGCTTATGT+TGG | + | Chr2:72738121-72738140 | MsG0280010642.01.T01:CDS | 55.0% |
CATGTCAATCTCCCACGCCG+TGG | + | Chr2:72738214-72738233 | MsG0280010642.01.T01:CDS | 60.0% | |
CGACGAGGAACCGTCGTCAA+AGG | + | Chr2:72738793-72738812 | MsG0280010642.01.T01:CDS | 60.0% | |
CGAGGAACCGTCGTCAAAGG+CGG | + | Chr2:72738796-72738815 | MsG0280010642.01.T01:CDS | 60.0% | |
GAAGAACTCGAAGCCGGTGG+TGG | - | Chr2:72738480-72738499 | None:intergenic | 60.0% | |
GCCAACGCTAACTCCAACGC+CGG | + | Chr2:72738309-72738328 | MsG0280010642.01.T01:CDS | 60.0% | |
! | ACCGGCGTTGGAGTTAGCGT+TGG | - | Chr2:72738313-72738332 | None:intergenic | 60.0% |
! | GGCGTGGAGTTTTCTTCCGC+CGG | - | Chr2:72738292-72738311 | None:intergenic | 60.0% |
!! | CCACCGGCTTCGAGTTCTTC+CGG | + | Chr2:72738480-72738499 | MsG0280010642.01.T01:CDS | 60.0% |
!! | CGTTGGAGTTAGCGTTGGCG+TGG | - | Chr2:72738308-72738327 | None:intergenic | 60.0% |
!! | TGCGCCGCTGTTGATGACCA+CGG | - | Chr2:72738456-72738475 | None:intergenic | 60.0% |
AAAGCCTCCGGCGCTAGGCT+CGG | + | Chr2:72738237-72738256 | MsG0280010642.01.T01:CDS | 65.0% | |
AACAGCGGCGCAACCACCAC+CGG | + | Chr2:72738464-72738483 | MsG0280010642.01.T01:CDS | 65.0% | |
CCGGAAGAACTCGAAGCCGG+TGG | - | Chr2:72738483-72738502 | None:intergenic | 65.0% | |
CGCATCGCCGCCTTTGACGA+CGG | - | Chr2:72738806-72738825 | None:intergenic | 65.0% | |
CGTCGTCAAAGGCGGCGATG+CGG | + | Chr2:72738804-72738823 | MsG0280010642.01.T01:CDS | 65.0% | |
! | CTAGCGCCGGAGGCTTTCCA+CGG | - | Chr2:72738234-72738253 | None:intergenic | 65.0% |
!! | TTGTTGCTCGGCGCTGGCAC+CGG | - | Chr2:72738331-72738350 | None:intergenic | 65.0% |
CCCACGCCGTGGAAAGCCTC+CGG | + | Chr2:72738225-72738244 | MsG0280010642.01.T01:CDS | 70.0% | |
CCGGAGGCTTTCCACGGCGT+GGG | - | Chr2:72738228-72738247 | None:intergenic | 70.0% | |
CGCGTTACCGAGCCTAGCGC+CGG | - | Chr2:72738247-72738266 | None:intergenic | 70.0% | |
CGTCAAAGGCGGCGATGCGG+CGG | + | Chr2:72738807-72738826 | MsG0280010642.01.T01:CDS | 70.0% | |
CGTGGAAAGCCTCCGGCGCT+AGG | + | Chr2:72738232-72738251 | MsG0280010642.01.T01:CDS | 70.0% | |
! | GTTACCGAGCCTAGCGCCGG+AGG | - | Chr2:72738244-72738263 | None:intergenic | 70.0% |
GCCGGAGGCTTTCCACGGCG+TGG | - | Chr2:72738229-72738248 | None:intergenic | 75.0% | |
!!! | CTCGGCGCTGGCACCGGCGT+TGG | - | Chr2:72738325-72738344 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 72737931 | 72739199 | 72737931 | ID=MsG0280010642.01;Name=MsG0280010642.01 |
Chr2 | mRNA | 72737931 | 72739199 | 72737931 | ID=MsG0280010642.01.T01;Parent=MsG0280010642.01;Name=MsG0280010642.01.T01;_AED=0.08;_eAED=0.08;_QI=138|1|1|1|1|1|2|325|230 |
Chr2 | exon | 72737931 | 72738614 | 72737931 | ID=MsG0280010642.01.T01:exon:19579;Parent=MsG0280010642.01.T01 |
Chr2 | exon | 72738728 | 72739199 | 72738728 | ID=MsG0280010642.01.T01:exon:19580;Parent=MsG0280010642.01.T01 |
Chr2 | five_prime_UTR | 72737931 | 72738068 | 72737931 | ID=MsG0280010642.01.T01:five_prime_utr;Parent=MsG0280010642.01.T01 |
Chr2 | CDS | 72738069 | 72738614 | 72738069 | ID=MsG0280010642.01.T01:cds;Parent=MsG0280010642.01.T01 |
Chr2 | CDS | 72738728 | 72738874 | 72738728 | ID=MsG0280010642.01.T01:cds;Parent=MsG0280010642.01.T01 |
Chr2 | three_prime_UTR | 72738875 | 72739199 | 72738875 | ID=MsG0280010642.01.T01:three_prime_utr;Parent=MsG0280010642.01.T01 |
Gene Sequence |
Protein sequence |