Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010845.01.T01 | KEH39291.1 | 87.363 | 641 | 41 | 3 | 6 | 646 | 1 | 601 | 0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010845.01.T01 | A0A072VCH1 | 87.363 | 641 | 41 | 3 | 6 | 646 | 1 | 601 | 0.0 | 1037 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280010841.01 | MsG0280010845.01 | 0.803141 | 4.017017e-49 | 2.003260e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010845.01.T01 | MTR_2g091335 | 87.363 | 641 | 41 | 3 | 6 | 646 | 1 | 601 | 0.0 | 1037 |
| MsG0280010845.01.T01 | MTR_2g091285 | 57.716 | 648 | 184 | 8 | 8 | 638 | 4 | 578 | 0.0 | 589 |
| MsG0280010845.01.T01 | MTR_2g091015 | 62.795 | 508 | 161 | 7 | 183 | 672 | 398 | 895 | 0.0 | 548 |
| MsG0280010845.01.T01 | MTR_2g091015 | 53.077 | 520 | 207 | 9 | 6 | 498 | 1 | 510 | 1.17e-133 | 415 |
| MsG0280010845.01.T01 | MTR_2g091325 | 56.055 | 578 | 166 | 8 | 5 | 501 | 1 | 571 | 0.0 | 541 |
| MsG0280010845.01.T01 | MTR_2g091260 | 44.780 | 795 | 298 | 15 | 6 | 663 | 1 | 791 | 1.57e-161 | 487 |
| MsG0280010845.01.T01 | MTR_6g045183 | 44.979 | 727 | 287 | 14 | 5 | 663 | 1 | 682 | 2.30e-159 | 478 |
| MsG0280010845.01.T01 | MTR_2g091280 | 59.100 | 489 | 178 | 6 | 6 | 477 | 1 | 484 | 3.55e-156 | 468 |
| MsG0280010845.01.T01 | MTR_2g091280 | 43.943 | 421 | 148 | 10 | 148 | 494 | 323 | 729 | 3.26e-66 | 232 |
| MsG0280010845.01.T01 | MTR_2g091280 | 35.932 | 295 | 163 | 5 | 115 | 384 | 409 | 702 | 2.17e-21 | 99.8 |
| MsG0280010845.01.T01 | MTR_2g091105 | 48.127 | 694 | 232 | 15 | 6 | 663 | 1 | 602 | 1.73e-155 | 465 |
| MsG0280010845.01.T01 | MTR_2g091290 | 43.830 | 705 | 288 | 9 | 62 | 663 | 53 | 752 | 2.48e-151 | 459 |
| MsG0280010845.01.T01 | MTR_2g091370 | 43.718 | 780 | 295 | 18 | 6 | 665 | 1 | 756 | 5.65e-146 | 446 |
| MsG0280010845.01.T01 | MTR_2g091030 | 47.482 | 695 | 201 | 13 | 6 | 646 | 1 | 585 | 4.60e-143 | 430 |
| MsG0280010845.01.T01 | MTR_2g091245 | 48.718 | 624 | 249 | 11 | 51 | 663 | 13 | 576 | 3.54e-140 | 425 |
| MsG0280010845.01.T01 | MTR_2g091080 | 42.188 | 768 | 274 | 16 | 46 | 652 | 3 | 761 | 3.33e-132 | 407 |
| MsG0280010845.01.T01 | MTR_2g093010 | 54.139 | 447 | 174 | 6 | 223 | 665 | 419 | 838 | 2.69e-123 | 387 |
| MsG0280010845.01.T01 | MTR_2g093010 | 41.586 | 517 | 254 | 10 | 6 | 494 | 1 | 497 | 1.04e-80 | 274 |
| MsG0280010845.01.T01 | MTR_2g093010 | 54.139 | 447 | 174 | 6 | 223 | 665 | 420 | 839 | 2.94e-123 | 387 |
| MsG0280010845.01.T01 | MTR_2g093010 | 41.506 | 518 | 255 | 10 | 5 | 494 | 1 | 498 | 5.68e-81 | 275 |
| MsG0280010845.01.T01 | MTR_7g056313 | 55.721 | 402 | 142 | 4 | 6 | 406 | 1 | 367 | 6.91e-122 | 367 |
| MsG0280010845.01.T01 | MTR_7g056313 | 45.570 | 158 | 78 | 3 | 170 | 323 | 215 | 368 | 8.03e-23 | 101 |
| MsG0280010845.01.T01 | MTR_5g038810 | 43.301 | 612 | 215 | 12 | 62 | 667 | 21 | 506 | 6.55e-119 | 370 |
| MsG0280010845.01.T01 | MTR_5g078510 | 51.566 | 479 | 185 | 8 | 212 | 663 | 2 | 460 | 1.22e-116 | 360 |
| MsG0280010845.01.T01 | MTR_5g078510 | 34.586 | 266 | 141 | 7 | 115 | 370 | 20 | 262 | 1.89e-15 | 80.1 |
| MsG0280010845.01.T01 | MTR_5g078510 | 36.420 | 162 | 102 | 1 | 354 | 514 | 1 | 162 | 7.50e-12 | 68.9 |
| MsG0280010845.01.T01 | MTR_2g091250 | 49.138 | 580 | 209 | 14 | 150 | 663 | 650 | 1209 | 3.89e-114 | 372 |
| MsG0280010845.01.T01 | MTR_2g091250 | 40.042 | 477 | 226 | 12 | 6 | 458 | 1 | 441 | 5.05e-67 | 239 |
| MsG0280010845.01.T01 | MTR_2g091250 | 40.000 | 375 | 160 | 7 | 145 | 481 | 383 | 730 | 6.20e-50 | 189 |
| MsG0280010845.01.T01 | MTR_2g091250 | 42.000 | 300 | 145 | 4 | 210 | 498 | 504 | 785 | 1.71e-41 | 163 |
| MsG0280010845.01.T01 | MTR_2g091250 | 37.500 | 392 | 186 | 8 | 132 | 477 | 320 | 698 | 1.16e-39 | 157 |
| MsG0280010845.01.T01 | MTR_2g091250 | 37.626 | 396 | 205 | 8 | 148 | 512 | 280 | 664 | 2.74e-39 | 156 |
| MsG0280010845.01.T01 | MTR_2g091250 | 35.623 | 393 | 217 | 7 | 114 | 484 | 481 | 859 | 9.08e-39 | 154 |
| MsG0280010845.01.T01 | MTR_2g010420 | 37.607 | 702 | 282 | 12 | 108 | 664 | 66 | 756 | 1.45e-108 | 348 |
| MsG0280010845.01.T01 | MTR_2g091090 | 40.176 | 682 | 271 | 16 | 5 | 663 | 1 | 568 | 4.88e-108 | 341 |
| MsG0280010845.01.T01 | MTR_2g091010 | 41.838 | 631 | 245 | 14 | 6 | 518 | 1 | 627 | 1.28e-107 | 342 |
| MsG0280010845.01.T01 | MTR_2g091240 | 52.268 | 463 | 169 | 12 | 220 | 664 | 78 | 506 | 6.24e-106 | 334 |
| MsG0280010845.01.T01 | MTR_2g091240 | 38.739 | 222 | 104 | 3 | 174 | 366 | 92 | 310 | 1.13e-23 | 106 |
| MsG0280010845.01.T01 | MTR_2g091240 | 31.118 | 331 | 174 | 13 | 43 | 350 | 9 | 308 | 2.09e-14 | 77.0 |
| MsG0280010845.01.T01 | MTR_2g104190 | 41.961 | 622 | 257 | 13 | 27 | 645 | 84 | 604 | 3.49e-105 | 333 |
| MsG0280010845.01.T01 | MTR_2g104190 | 33.190 | 464 | 210 | 10 | 6 | 379 | 1 | 454 | 1.82e-51 | 189 |
| MsG0280010845.01.T01 | MTR_2g010420 | 37.703 | 679 | 271 | 11 | 108 | 645 | 66 | 733 | 2.34e-104 | 334 |
| MsG0280010845.01.T01 | MTR_3g110385 | 37.158 | 767 | 263 | 16 | 75 | 672 | 33 | 749 | 7.37e-102 | 330 |
| MsG0280010845.01.T01 | MTR_2g091110 | 46.417 | 614 | 230 | 13 | 115 | 663 | 637 | 1216 | 1.66e-101 | 337 |
| MsG0280010845.01.T01 | MTR_2g091110 | 35.741 | 526 | 242 | 13 | 45 | 484 | 2 | 517 | 1.55e-55 | 205 |
| MsG0280010845.01.T01 | MTR_2g091110 | 39.950 | 398 | 181 | 9 | 111 | 461 | 549 | 935 | 8.74e-48 | 182 |
| MsG0280010845.01.T01 | MTR_2g091110 | 42.484 | 306 | 139 | 4 | 210 | 484 | 519 | 818 | 6.36e-44 | 170 |
| MsG0280010845.01.T01 | MTR_2g091110 | 33.656 | 413 | 197 | 8 | 146 | 498 | 363 | 758 | 3.86e-35 | 143 |
| MsG0280010845.01.T01 | MTR_2g091025 | 46.437 | 435 | 164 | 7 | 235 | 657 | 150 | 527 | 2.05e-92 | 298 |
| MsG0280010845.01.T01 | MTR_2g091330 | 38.844 | 623 | 247 | 13 | 6 | 500 | 1 | 617 | 7.14e-83 | 274 |
| MsG0280010845.01.T01 | MTR_2g090980 | 56.574 | 251 | 103 | 2 | 419 | 665 | 288 | 536 | 6.48e-74 | 248 |
| MsG0280010845.01.T01 | MTR_2g091005 | 36.331 | 556 | 248 | 12 | 6 | 486 | 1 | 525 | 6.68e-69 | 236 |
| MsG0280010845.01.T01 | MTR_2g103620 | 46.381 | 373 | 131 | 8 | 280 | 646 | 66 | 375 | 9.92e-67 | 224 |
| MsG0280010845.01.T01 | MTR_2g103620 | 33.840 | 263 | 128 | 5 | 62 | 324 | 8 | 224 | 2.70e-20 | 94.0 |
| MsG0280010845.01.T01 | MTR_2g103640 | 50.737 | 339 | 110 | 9 | 287 | 622 | 69 | 353 | 1.06e-66 | 223 |
| MsG0280010845.01.T01 | MTR_2g103640 | 34.586 | 266 | 123 | 9 | 68 | 323 | 4 | 228 | 2.85e-21 | 96.3 |
| MsG0280010845.01.T01 | MTR_2g091315 | 33.813 | 556 | 247 | 13 | 6 | 480 | 1 | 516 | 1.82e-62 | 218 |
| MsG0280010845.01.T01 | MTR_2g091040 | 34.317 | 542 | 217 | 14 | 5 | 526 | 1 | 423 | 2.87e-54 | 194 |
| MsG0280010845.01.T01 | MTR_2g090640 | 38.144 | 388 | 201 | 6 | 184 | 535 | 100 | 484 | 2.28e-46 | 173 |
| MsG0280010845.01.T01 | MTR_5g078500 | 37.574 | 338 | 156 | 10 | 6 | 323 | 1 | 303 | 3.61e-45 | 163 |
| MsG0280010845.01.T01 | MTR_2g091070 | 58.385 | 161 | 53 | 3 | 509 | 657 | 2 | 160 | 8.51e-39 | 142 |
| MsG0280010845.01.T01 | MTR_8g107320 | 46.000 | 200 | 73 | 5 | 441 | 636 | 36 | 204 | 3.27e-32 | 124 |
| MsG0280010845.01.T01 | MTR_2g091360 | 50.340 | 147 | 73 | 0 | 211 | 357 | 23 | 169 | 4.04e-31 | 124 |
| MsG0280010845.01.T01 | MTR_2g091360 | 40.367 | 109 | 61 | 1 | 345 | 449 | 41 | 149 | 3.41e-11 | 65.5 |
| MsG0280010845.01.T01 | MTR_7g056317 | 75.701 | 107 | 21 | 2 | 569 | 671 | 4 | 109 | 6.34e-27 | 105 |
| MsG0280010845.01.T01 | MTR_8g467200 | 36.559 | 279 | 150 | 9 | 397 | 664 | 59 | 321 | 4.60e-23 | 103 |
| MsG0280010845.01.T01 | MTR_4g084920 | 49.618 | 131 | 50 | 5 | 467 | 587 | 170 | 294 | 6.81e-23 | 100 |
| MsG0280010845.01.T01 | MTR_4g084920 | 34.848 | 198 | 105 | 6 | 144 | 336 | 15 | 193 | 6.17e-14 | 73.9 |
| MsG0280010845.01.T01 | MTR_4g046660 | 28.381 | 599 | 338 | 15 | 149 | 664 | 5 | 595 | 2.55e-21 | 99.4 |
| MsG0280010845.01.T01 | MTR_8g106540 | 30.488 | 328 | 166 | 9 | 331 | 658 | 24 | 289 | 2.44e-20 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010845.01.T01 | AT5G27220 | 27.088 | 491 | 254 | 15 | 208 | 632 | 336 | 788 | 4.92e-13 | 73.2 |
| MsG0280010845.01.T01 | AT5G27220 | 27.088 | 491 | 254 | 15 | 208 | 632 | 336 | 788 | 4.92e-13 | 73.2 |
| MsG0280010845.01.T01 | AT5G27220 | 27.088 | 491 | 254 | 15 | 208 | 632 | 336 | 788 | 5.27e-13 | 73.2 |
| MsG0280010845.01.T01 | AT5G27220 | 27.088 | 491 | 254 | 15 | 208 | 632 | 336 | 788 | 5.27e-13 | 73.2 |
Find 104 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTACACCGTGGAATAAT+TGG | 0.126685 | 2:+75712871 | None:intergenic |
| CTCCTCAATATCTCTCTTTA+TGG | 0.161451 | 2:+75714159 | None:intergenic |
| CCTTCAAATTCACCCTCTTT+TGG | 0.208741 | 2:+75713617 | None:intergenic |
| GAAAATTCTTTGGTAGTTCT+TGG | 0.268066 | 2:-75712697 | MsG0280010845.01.T01:CDS |
| AGAAAATACTGAAAATTCTT+TGG | 0.285376 | 2:-75712707 | MsG0280010845.01.T01:CDS |
| CAGTTTCTATAGTTCAATAA+TGG | 0.314723 | 2:-75714611 | None:intergenic |
| TTATCAGATACCCTCTTAAC+AGG | 0.329148 | 2:+75714400 | None:intergenic |
| AAAGGATGGACAGCTCTATT+TGG | 0.335172 | 2:-75714023 | MsG0280010845.01.T01:CDS |
| GTGATAGTATCCTTCCTCTT+TGG | 0.339861 | 2:+75714427 | None:intergenic |
| TTTCTATTTGCGTCGTCCTT+TGG | 0.342374 | 2:+75714197 | None:intergenic |
| CGTTATCATCATATGATGTT+GGG | 0.374617 | 2:+75714335 | None:intergenic |
| TTTGATGAGGAAATAGAATC+AGG | 0.389151 | 2:-75713161 | MsG0280010845.01.T01:intron |
| TCAAAAGAAAAGAAATTTGA+TGG | 0.390578 | 2:-75713533 | MsG0280010845.01.T01:CDS |
| TCTGTCAACTCAGGCTCCTT+CGG | 0.393500 | 2:+75713212 | None:intergenic |
| AGAACTCAACACAAAAGATA+TGG | 0.409202 | 2:-75713972 | MsG0280010845.01.T01:CDS |
| CTATCACACTGCCTGTTAAG+AGG | 0.418465 | 2:-75714411 | MsG0280010845.01.T01:CDS |
| TCAAAAGAGAAGCAGCTTGA+TGG | 0.422948 | 2:-75713827 | MsG0280010845.01.T01:CDS |
| AATTTGTTGTGCTTGTTACT+TGG | 0.424201 | 2:-75711403 | MsG0280010845.01.T01:CDS |
| TTTACATAAGGGTTAATCTT+CGG | 0.428795 | 2:+75712775 | None:intergenic |
| TCTTACACCGTGGAATAATT+GGG | 0.440368 | 2:+75712872 | None:intergenic |
| GATTCAAAGTCTTGACGAAA+AGG | 0.441450 | 2:+75714487 | None:intergenic |
| TTTCTTCATCAAACCGCAAA+AGG | 0.446848 | 2:+75714369 | None:intergenic |
| GAAGGAGCTAGTGAATGATT+TGG | 0.455266 | 2:-75713894 | MsG0280010845.01.T01:CDS |
| AGAGAATAAGTTCAAAGTAC+TGG | 0.461562 | 2:-75713318 | MsG0280010845.01.T01:CDS |
| TTGATTCGAGCTCCTTCAGT+TGG | 0.476903 | 2:+75713552 | None:intergenic |
| TCGTTATCATCATATGATGT+TGG | 0.479159 | 2:+75714334 | None:intergenic |
| CCAAAAGAGGGTGAATTTGA+AGG | 0.481502 | 2:-75713617 | MsG0280010845.01.T01:CDS |
| ACTCAAGTTAAAAGAGAAGC+AGG | 0.485078 | 2:-75713288 | MsG0280010845.01.T01:CDS |
| GCAATTGAAAGGACAAGTTA+AGG | 0.485918 | 2:-75713690 | MsG0280010845.01.T01:CDS |
| TGCTAGCGACATCATTCTGT+TGG | 0.485919 | 2:-75712824 | MsG0280010845.01.T01:CDS |
| AGAATGTCAGTTTCATCACT+TGG | 0.487761 | 2:+75712952 | None:intergenic |
| AATTATTCCACGGTGTAAGA+AGG | 0.490364 | 2:-75712869 | MsG0280010845.01.T01:CDS |
| TATTGTTTCTCTGTCAACTC+AGG | 0.490786 | 2:+75713203 | None:intergenic |
| GGAATTCAAAGGTCGGGTTA+AGG | 0.495649 | 2:-75713438 | MsG0280010845.01.T01:CDS |
| TTGATTCATGTTCCTCCACT+CGG | 0.496273 | 2:+75713804 | None:intergenic |
| TTAAAAGAGAAGCAGGTTGA+AGG | 0.496390 | 2:-75713281 | MsG0280010845.01.T01:CDS |
| CATTCACTAGCTCCTTCACT+TGG | 0.497463 | 2:+75713900 | None:intergenic |
| GAAGGAGTTTAAAACGAAGA+AGG | 0.497526 | 2:-75713462 | MsG0280010845.01.T01:CDS |
| TGTTTATTTAGCTTTGACTC+GGG | 0.498384 | 2:+75713245 | None:intergenic |
| TAGTTCAATAATGGATATTG+AGG | 0.501636 | 2:-75714602 | MsG0280010845.01.T01:CDS |
| TGCAAGTTCTTTCTTGAGTG+AGG | 0.502269 | 2:+75714246 | None:intergenic |
| GAAGGAGGAATTCAAAGGTC+GGG | 0.508275 | 2:-75713444 | MsG0280010845.01.T01:CDS |
| GGATGGACAGCTCTATTTGG+TGG | 0.511268 | 2:-75714020 | MsG0280010845.01.T01:CDS |
| TTCCATAAAGAGAGATATTG+AGG | 0.514073 | 2:-75714161 | MsG0280010845.01.T01:CDS |
| TGATTTGATGTACTCAACCT+TGG | 0.514223 | 2:+75713385 | None:intergenic |
| TAGATTCTAGCCCCTTCAGT+TGG | 0.517790 | 2:+75713762 | None:intergenic |
| AAGGACGACGCAAATAGAAA+AGG | 0.521905 | 2:-75714194 | MsG0280010845.01.T01:CDS |
| CGAAGCTCACAAGAAAATGC+AGG | 0.525690 | 2:-75714080 | MsG0280010845.01.T01:CDS |
| CAACTTGATGTCCAAGTGAA+GGG | 0.525880 | 2:-75713647 | MsG0280010845.01.T01:CDS |
| AGAATCTCAAATCACAAGAA+AGG | 0.525880 | 2:-75713712 | MsG0280010845.01.T01:CDS |
| GAAATTTGATGGACAAGTGA+AGG | 0.529834 | 2:-75713522 | MsG0280010845.01.T01:CDS |
| ATGTTTATTTAGCTTTGACT+CGG | 0.530810 | 2:+75713244 | None:intergenic |
| ATACTTGTTTCATCAGTGGT+TGG | 0.537065 | 2:+75712985 | None:intergenic |
| TAATGCAGCTACATCTTACA+TGG | 0.538418 | 2:-75713022 | MsG0280010845.01.T01:intron |
| CGGTTTGATGAAGAAATCCA+AGG | 0.541007 | 2:-75714362 | MsG0280010845.01.T01:CDS |
| TGAAGGCAAGGTGAAGAAGC+TGG | 0.546278 | 2:-75713600 | MsG0280010845.01.T01:CDS |
| GAAGGGGTTAAAACCAAAAG+AGG | 0.551141 | 2:-75713630 | MsG0280010845.01.T01:CDS |
| TCAAAGCTAAATAAACATGA+TGG | 0.552723 | 2:-75713239 | MsG0280010845.01.T01:CDS |
| CTGCATACTTGTTTCATCAG+TGG | 0.556772 | 2:+75712981 | None:intergenic |
| TGATAGCGTGGTTTCCAAAG+AGG | 0.557643 | 2:-75714441 | MsG0280010845.01.T01:CDS |
| AGAAGGAGGAATTCAAAGGT+CGG | 0.559804 | 2:-75713445 | MsG0280010845.01.T01:CDS |
| ATATGATGTTGGGGACACCT+TGG | 0.560967 | 2:+75714345 | None:intergenic |
| AGAATTTGAAAGCCAACTGA+AGG | 0.562148 | 2:-75713774 | MsG0280010845.01.T01:CDS |
| GGAGTTTAAAACGAAGAAGG+AGG | 0.567527 | 2:-75713459 | MsG0280010845.01.T01:CDS |
| GCAGGTTGAAGGAGAAGTCG+AGG | 0.567704 | 2:-75713270 | MsG0280010845.01.T01:CDS |
| GATTTATCAGTTGACATGGC+AGG | 0.570315 | 2:+75714274 | None:intergenic |
| ATTATTCCACGGTGTAAGAA+GGG | 0.572016 | 2:-75712868 | MsG0280010845.01.T01:CDS |
| TATGGAACTTCGTCAAGTCA+TGG | 0.572370 | 2:-75713954 | MsG0280010845.01.T01:CDS |
| GAATGTCAGTTTCATCACTT+GGG | 0.573057 | 2:+75712953 | None:intergenic |
| CGAAGCAATTTGAAGAACGA+TGG | 0.576197 | 2:-75713358 | MsG0280010845.01.T01:CDS |
| TTTGGAAACCACGCTATCAA+AGG | 0.576926 | 2:+75714445 | None:intergenic |
| GCAACTTGATGTCCAAGTGA+AGG | 0.577454 | 2:-75713648 | MsG0280010845.01.T01:CDS |
| AAAGAAGCAATTTAAAACCA+AGG | 0.581001 | 2:-75713402 | MsG0280010845.01.T01:CDS |
| GAATTTGAAAGCCAACTGAA+GGG | 0.582566 | 2:-75713773 | MsG0280010845.01.T01:CDS |
| GGATAACATTTCAAAACAGA+AGG | 0.586471 | 2:-75713933 | MsG0280010845.01.T01:CDS |
| GAAGGAGTTCCAGTCAAAAG+AGG | 0.588375 | 2:-75713504 | MsG0280010845.01.T01:CDS |
| AGAGGGTGAATTTGAAGGCA+AGG | 0.589411 | 2:-75713612 | MsG0280010845.01.T01:CDS |
| GGAATTTAACAGTCAAGTGA+AGG | 0.589861 | 2:-75713480 | MsG0280010845.01.T01:CDS |
| TATCACACTGCCTGTTAAGA+GGG | 0.592867 | 2:-75714410 | MsG0280010845.01.T01:CDS |
| GCATTTCAAGAGCCAACTGA+AGG | 0.597255 | 2:-75713564 | MsG0280010845.01.T01:CDS |
| TCACAAGAAAGGCAATTGAA+AGG | 0.597578 | 2:-75713701 | MsG0280010845.01.T01:CDS |
| TACTGAACCCAATTATTCCA+CGG | 0.601091 | 2:-75712879 | MsG0280010845.01.T01:CDS |
| GGTATTTGAAAGCCAAGTGA+AGG | 0.603340 | 2:-75713912 | MsG0280010845.01.T01:CDS |
| GCAGCTTGATGGCCGAGTGG+AGG | 0.604745 | 2:-75713816 | MsG0280010845.01.T01:CDS |
| TGGACAGCTCTATTTGGTGG+AGG | 0.605355 | 2:-75714017 | MsG0280010845.01.T01:CDS |
| ATAATGTTCCTTTGATAGCG+TGG | 0.608827 | 2:-75714453 | MsG0280010845.01.T01:CDS |
| GGAGTTCCAGTCAAAAGAGG+TGG | 0.609742 | 2:-75713501 | MsG0280010845.01.T01:CDS |
| AAATGATTTATCAGTTGACA+TGG | 0.611942 | 2:+75714270 | None:intergenic |
| GTTATCATCATATGATGTTG+GGG | 0.612590 | 2:+75714336 | None:intergenic |
| ACGAAGAAGGAGGAATTCAA+AGG | 0.614145 | 2:-75713449 | MsG0280010845.01.T01:CDS |
| AGCGTGGTTTCCAAAGAGGA+AGG | 0.624932 | 2:-75714437 | MsG0280010845.01.T01:CDS |
| AACTTGATGTCCAAGTGAAG+GGG | 0.630056 | 2:-75713646 | MsG0280010845.01.T01:CDS |
| AATCATTTGAGGATTGCCAA+AGG | 0.639694 | 2:-75714213 | MsG0280010845.01.T01:CDS |
| GATTCTCAGCAAAATCTGCA+AGG | 0.640678 | 2:+75711441 | None:intergenic |
| AATTTGAAAGCCAACTGAAG+GGG | 0.641010 | 2:-75713772 | MsG0280010845.01.T01:CDS |
| TAAACATGATGGAACACCGA+AGG | 0.645152 | 2:-75713228 | MsG0280010845.01.T01:CDS |
| GAAGCTCACAAGAAAATGCA+GGG | 0.647450 | 2:-75714079 | MsG0280010845.01.T01:CDS |
| TGCTCAGCACAAGATAGCTG+TGG | 0.658441 | 2:-75712596 | MsG0280010845.01.T01:CDS |
| TAAGGGTTAATCTTCGGTGA+CGG | 0.669285 | 2:+75712781 | None:intergenic |
| GAAGCAGCTTGATGGCCGAG+TGG | 0.673580 | 2:-75713819 | MsG0280010845.01.T01:CDS |
| TAGCATCAATAATCACAGCA+TGG | 0.675578 | 2:+75712842 | None:intergenic |
| AAGGGGTTAAAACCAAAAGA+GGG | 0.677760 | 2:-75713629 | MsG0280010845.01.T01:CDS |
| TTGACTTAAGCTCCTCCACG+CGG | 0.692205 | 2:+75713846 | None:intergenic |
| TGGTCTCCCTTCTTACACCG+TGG | 0.716671 | 2:+75712862 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAACATTTAAATTTTAAA+TGG | - | Chr2:75711437-75711456 | MsG0280010845.01.T01:CDS | 10.0% |
| !!! | ATTAATAAAATATTTTGATG+AGG | - | Chr2:75712806-75712825 | MsG0280010845.01.T01:CDS | 10.0% |
| !!! | TCATCAAAATATTTTATTAA+TGG | + | Chr2:75712807-75712826 | None:intergenic | 10.0% |
| !! | AATTTATTTAATGTTTGTTC+TGG | - | Chr2:75714486-75714505 | MsG0280010845.01.T01:CDS | 15.0% |
| !! | ACAAACATTAAATAAATTCT+AGG | + | Chr2:75714484-75714503 | None:intergenic | 15.0% |
| !!! | ATTAGTTATATTTTCCAATT+TGG | + | Chr2:75713923-75713942 | None:intergenic | 15.0% |
| !!! | ATTTTAATTTAGATATGGTT+TGG | - | Chr2:75713448-75713467 | MsG0280010845.01.T01:CDS | 15.0% |
| !! | AAAAAGAAAATTAGTCATGT+TGG | - | Chr2:75711868-75711887 | MsG0280010845.01.T01:intron | 20.0% |
| !! | AGAAAATACTGAAAATTCTT+TGG | - | Chr2:75713273-75713292 | MsG0280010845.01.T01:CDS | 20.0% |
| !! | ATCAACATTACTAAAAGAAA+TGG | + | Chr2:75712887-75712906 | None:intergenic | 20.0% |
| !! | ATTTGTAGAAAAATCATTTG+AGG | - | Chr2:75711756-75711775 | MsG0280010845.01.T01:intron | 20.0% |
| !! | TCAAAAGAAAAGAAATTTGA+TGG | - | Chr2:75712447-75712466 | MsG0280010845.01.T01:intron | 20.0% |
| !! | TTGTGTATAATAGTGTTATA+AGG | - | Chr2:75713984-75714003 | MsG0280010845.01.T01:CDS | 20.0% |
| !!! | CAGGTATTTTAATTTAGATA+TGG | - | Chr2:75713443-75713462 | MsG0280010845.01.T01:CDS | 20.0% |
| !!! | TATTTCTTGCATTTTCTAAA+TGG | - | Chr2:75714409-75714428 | MsG0280010845.01.T01:CDS | 20.0% |
| ! | AAAAATTGAAGAATGTGTCA+AGG | - | Chr2:75711924-75711943 | MsG0280010845.01.T01:intron | 25.0% |
| ! | AAATGATTTATCAGTTGACA+TGG | + | Chr2:75711713-75711732 | None:intergenic | 25.0% |
| ! | AACCTGATCTATATATATGA+GGG | - | Chr2:75712916-75712935 | MsG0280010845.01.T01:CDS | 25.0% |
| ! | ATAATAGTGTTATAAGGTTC+TGG | - | Chr2:75713990-75714009 | MsG0280010845.01.T01:CDS | 25.0% |
| ! | ATTGTTATCTATCTGCTATT+AGG | - | Chr2:75714074-75714093 | MsG0280010845.01.T01:CDS | 25.0% |
| ! | TAACCTGATCTATATATATG+AGG | - | Chr2:75712915-75712934 | MsG0280010845.01.T01:CDS | 25.0% |
| ! | TAATAGCAGATAGATAACAA+TGG | + | Chr2:75714075-75714094 | None:intergenic | 25.0% |
| ! | TAGATATAGATAGAAACATG+AGG | + | Chr2:75714034-75714053 | None:intergenic | 25.0% |
| ! | TATAGTAGATGTTTGTAACT+TGG | - | Chr2:75714253-75714272 | MsG0280010845.01.T01:CDS | 25.0% |
| ! | TCAAAGCTAAATAAACATGA+TGG | - | Chr2:75712741-75712760 | MsG0280010845.01.T01:CDS | 25.0% |
| ! | TGTGTAAAATGAGATAGTAA+AGG | - | Chr2:75714109-75714128 | MsG0280010845.01.T01:CDS | 25.0% |
| ! | TTAAGAGAAAATTGACATCT+TGG | - | Chr2:75714336-75714355 | MsG0280010845.01.T01:CDS | 25.0% |
| ! | TTTACATAAGGGTTAATCTT+CGG | + | Chr2:75713208-75713227 | None:intergenic | 25.0% |
| !! | AAAGAAGCAATTTAAAACCA+AGG | - | Chr2:75712578-75712597 | MsG0280010845.01.T01:intron | 25.0% |
| !! | AGTTGTCCTATTTCTTAAAA+GGG | + | Chr2:75714151-75714170 | None:intergenic | 25.0% |
| !! | ATTTTGCTGAGAATCTTATT+AGG | - | Chr2:75714547-75714566 | MsG0280010845.01.T01:CDS | 25.0% |
| !! | TTAGAACCATGTTTGAAATA+TGG | - | Chr2:75713739-75713758 | MsG0280010845.01.T01:CDS | 25.0% |
| !!! | AATGAACCCTTTTAAGAAAT+AGG | - | Chr2:75714142-75714161 | MsG0280010845.01.T01:CDS | 25.0% |
| !!! | AATGCGTCTTTTTTTACATA+AGG | + | Chr2:75713220-75713239 | None:intergenic | 25.0% |
| !!! | ATGCGTCTTTTTTTACATAA+GGG | + | Chr2:75713219-75713238 | None:intergenic | 25.0% |
| !!! | ATGTTTATTTAGCTTTGACT+CGG | + | Chr2:75712739-75712758 | None:intergenic | 25.0% |
| !!! | TAGTTCAATAATGGATATTG+AGG | - | Chr2:75711378-75711397 | MsG0280010845.01.T01:CDS | 25.0% |
| !!! | TATATCCTATTTTGAGAATG+TGG | - | Chr2:75713712-75713731 | MsG0280010845.01.T01:CDS | 25.0% |
| !!! | TTTCTTATTTTCAAGCTCTT+TGG | + | Chr2:75711851-75711870 | None:intergenic | 25.0% |
| AACAAAAAACCAAAGCAGAT+TGG | + | Chr2:75714460-75714479 | None:intergenic | 30.0% | |
| AAGTTTATTTGCAAAACCCA+AGG | + | Chr2:75713422-75713441 | None:intergenic | 30.0% | |
| ACAAATGATAGAACTGTTAG+CGG | + | Chr2:75714317-75714336 | None:intergenic | 30.0% | |
| AGAACTCAACACAAAAGATA+TGG | - | Chr2:75712008-75712027 | MsG0280010845.01.T01:intron | 30.0% | |
| AGAATCTCAAATCACAAGAA+AGG | - | Chr2:75712268-75712287 | MsG0280010845.01.T01:intron | 30.0% | |
| AGAGAATAAGTTCAAAGTAC+TGG | - | Chr2:75712662-75712681 | MsG0280010845.01.T01:CDS | 30.0% | |
| AGATTCCACATTCTCAAAAT+AGG | + | Chr2:75713720-75713739 | None:intergenic | 30.0% | |
| ATCCATAATACAACACTACA+AGG | + | Chr2:75713858-75713877 | None:intergenic | 30.0% | |
| ATGATAAGTACAAACTATGC+AGG | - | Chr2:75714205-75714224 | MsG0280010845.01.T01:CDS | 30.0% | |
| ATGGATGATGAATTCTTAAG+TGG | - | Chr2:75713872-75713891 | MsG0280010845.01.T01:CDS | 30.0% | |
| CGTTATCATCATATGATGTT+GGG | + | Chr2:75711648-75711667 | None:intergenic | 30.0% | |
| GAGAACTGAGTCATATTTAA+CGG | + | Chr2:75713826-75713845 | None:intergenic | 30.0% | |
| GCAAGAAATACATAAAAGAG+AGG | + | Chr2:75714399-75714418 | None:intergenic | 30.0% | |
| GGATAACATTTCAAAACAGA+AGG | - | Chr2:75712047-75712066 | MsG0280010845.01.T01:intron | 30.0% | |
| GTTATCATCATATGATGTTG+GGG | + | Chr2:75711647-75711666 | None:intergenic | 30.0% | |
| TAGATAGAAACATGAGGAAA+TGG | + | Chr2:75714028-75714047 | None:intergenic | 30.0% | |
| TCATCTCCAACACAAAAATT+TGG | + | Chr2:75711415-75711434 | None:intergenic | 30.0% | |
| TCGTTATCATCATATGATGT+TGG | + | Chr2:75711649-75711668 | None:intergenic | 30.0% | |
| TGCAAACCATATTTCAAACA+TGG | + | Chr2:75713748-75713767 | None:intergenic | 30.0% | |
| TTACATGTGTAACTCTTATG+AGG | - | Chr2:75713571-75713590 | MsG0280010845.01.T01:CDS | 30.0% | |
| TTCCATAAAGAGAGATATTG+AGG | - | Chr2:75711819-75711838 | MsG0280010845.01.T01:intron | 30.0% | |
| TTTGATGAGGAAATAGAATC+AGG | - | Chr2:75712819-75712838 | MsG0280010845.01.T01:CDS | 30.0% | |
| ! | ATATCCAGAACAATTTTTGC+TGG | + | Chr2:75713079-75713098 | None:intergenic | 30.0% |
| ! | GAAAATTCTTTGGTAGTTCT+TGG | - | Chr2:75713283-75713302 | MsG0280010845.01.T01:CDS | 30.0% |
| ! | GAGTTGTCCTATTTCTTAAA+AGG | + | Chr2:75714152-75714171 | None:intergenic | 30.0% |
| ! | GATAAGCCAAATTTTTGTGT+TGG | - | Chr2:75711406-75711425 | MsG0280010845.01.T01:CDS | 30.0% |
| ! | GCATTTTCTAAATGGTTTGA+AGG | - | Chr2:75714417-75714436 | MsG0280010845.01.T01:CDS | 30.0% |
| ! | GGTTTTGCAAATAAACTTTC+AGG | - | Chr2:75713424-75713443 | MsG0280010845.01.T01:CDS | 30.0% |
| ! | TTTTGATGAAGATGAAGTCT+TGG | - | Chr2:75713345-75713364 | MsG0280010845.01.T01:CDS | 30.0% |
| !! | AACTCTTATGAGGTTTGTTA+TGG | - | Chr2:75713581-75713600 | MsG0280010845.01.T01:CDS | 30.0% |
| !! | AATTTGTTGTGCTTGTTACT+TGG | - | Chr2:75714577-75714596 | MsG0280010845.01.T01:CDS | 30.0% |
| !! | TACATTGAGTTGAACATAAG+TGG | - | Chr2:75713895-75713914 | MsG0280010845.01.T01:CDS | 30.0% |
| !! | TGTTTATTTAGCTTTGACTC+GGG | + | Chr2:75712738-75712757 | None:intergenic | 30.0% |
| AAGGGGTTAAAACCAAAAGA+GGG | - | Chr2:75712351-75712370 | MsG0280010845.01.T01:intron | 35.0% | |
| AATCATTTGAGGATTGCCAA+AGG | - | Chr2:75711767-75711786 | MsG0280010845.01.T01:intron | 35.0% | |
| AATTATTCCACGGTGTAAGA+AGG | - | Chr2:75713111-75713130 | MsG0280010845.01.T01:intron | 35.0% | |
| AATTTGAAAGCCAACTGAAG+GGG | - | Chr2:75712208-75712227 | MsG0280010845.01.T01:intron | 35.0% | |
| ACTCAAGTTAAAAGAGAAGC+AGG | - | Chr2:75712692-75712711 | MsG0280010845.01.T01:CDS | 35.0% | |
| AGAATGTCAGTTTCATCACT+TGG | + | Chr2:75713031-75713050 | None:intergenic | 35.0% | |
| AGAATTTGAAAGCCAACTGA+AGG | - | Chr2:75712206-75712225 | MsG0280010845.01.T01:intron | 35.0% | |
| AGATCCAGCAAAAATTGTTC+TGG | - | Chr2:75713072-75713091 | MsG0280010845.01.T01:intron | 35.0% | |
| ATACTTGTTTCATCAGTGGT+TGG | + | Chr2:75712998-75713017 | None:intergenic | 35.0% | |
| ATCTATCTGCTATTAGGATG+AGG | - | Chr2:75714080-75714099 | MsG0280010845.01.T01:CDS | 35.0% | |
| ATTATTCCACGGTGTAAGAA+GGG | - | Chr2:75713112-75713131 | MsG0280010845.01.T01:intron | 35.0% | |
| CATGTGTAACTCTTCTTTGA+AGG | - | Chr2:75713542-75713561 | MsG0280010845.01.T01:CDS | 35.0% | |
| CTCCCTCATATATATAGATC+AGG | + | Chr2:75712921-75712940 | None:intergenic | 35.0% | |
| CTCCTCAATATCTCTCTTTA+TGG | + | Chr2:75711824-75711843 | None:intergenic | 35.0% | |
| GAATGTCAGTTTCATCACTT+GGG | + | Chr2:75713030-75713049 | None:intergenic | 35.0% | |
| GAATTTGAAAGCCAACTGAA+GGG | - | Chr2:75712207-75712226 | MsG0280010845.01.T01:intron | 35.0% | |
| GATTCAAAGTCTTGACGAAA+AGG | + | Chr2:75711496-75711515 | None:intergenic | 35.0% | |
| GCAATTGAAAGGACAAGTTA+AGG | - | Chr2:75712290-75712309 | MsG0280010845.01.T01:intron | 35.0% | |
| GGAATTTAACAGTCAAGTGA+AGG | - | Chr2:75712500-75712519 | MsG0280010845.01.T01:intron | 35.0% | |
| GTCCTTGTAGTGTTGTATTA+TGG | - | Chr2:75713853-75713872 | MsG0280010845.01.T01:CDS | 35.0% | |
| TAAATATGACTCAGTTCTCC+TGG | - | Chr2:75713827-75713846 | MsG0280010845.01.T01:CDS | 35.0% | |
| TAATGCAGCTACATCTTACA+TGG | - | Chr2:75712958-75712977 | MsG0280010845.01.T01:CDS | 35.0% | |
| TACTGAACCCAATTATTCCA+CGG | - | Chr2:75713101-75713120 | MsG0280010845.01.T01:intron | 35.0% | |
| TAGCATCAATAATCACAGCA+TGG | + | Chr2:75713141-75713160 | None:intergenic | 35.0% | |
| TCACAAGAAAGGCAATTGAA+AGG | - | Chr2:75712279-75712298 | MsG0280010845.01.T01:intron | 35.0% | |
| TCTTACACCGTGGAATAATT+GGG | + | Chr2:75713111-75713130 | None:intergenic | 35.0% | |
| TGAAATTGAACTCGCGTAAT+TGG | - | Chr2:75714278-75714297 | MsG0280010845.01.T01:CDS | 35.0% | |
| TGATTTGATGTACTCAACCT+TGG | + | Chr2:75712598-75712617 | None:intergenic | 35.0% | |
| TTATCAGATACCCTCTTAAC+AGG | + | Chr2:75711583-75711602 | None:intergenic | 35.0% | |
| TTATTCAGTCCAATCTGCTT+TGG | - | Chr2:75714448-75714467 | MsG0280010845.01.T01:CDS | 35.0% | |
| TTCTTACACCGTGGAATAAT+TGG | + | Chr2:75713112-75713131 | None:intergenic | 35.0% | |
| TTTCTTCATCAAACCGCAAA+AGG | + | Chr2:75711614-75711633 | None:intergenic | 35.0% | |
| ! | AAGGATTTTGTAGCAAAGGA+TGG | - | Chr2:75711943-75711962 | MsG0280010845.01.T01:intron | 35.0% |
| ! | GAAATTTGATGGACAAGTGA+AGG | - | Chr2:75712458-75712477 | MsG0280010845.01.T01:intron | 35.0% |
| ! | GAAGGAGTTTAAAACGAAGA+AGG | - | Chr2:75712518-75712537 | MsG0280010845.01.T01:intron | 35.0% |
| ! | GATAACAACAGTTCCTTTTG+CGG | - | Chr2:75711598-75711617 | MsG0280010845.01.T01:intron | 35.0% |
| ! | TAAATTCCACCTCTTTTGAC+TGG | + | Chr2:75712488-75712507 | None:intergenic | 35.0% |
| ! | TATTGTTTCTCTGTCAACTC+AGG | + | Chr2:75712780-75712799 | None:intergenic | 35.0% |
| ! | TGTAACTCTTCTTTGAAGGA+AGG | - | Chr2:75713546-75713565 | MsG0280010845.01.T01:CDS | 35.0% |
| ! | TGTCAAGGATTTTGTAGCAA+AGG | - | Chr2:75711939-75711958 | MsG0280010845.01.T01:intron | 35.0% |
| ! | TTAAAAGAGAAGCAGGTTGA+AGG | - | Chr2:75712699-75712718 | MsG0280010845.01.T01:CDS | 35.0% |
| !! | ATAATGTTCCTTTGATAGCG+TGG | - | Chr2:75711527-75711546 | MsG0280010845.01.T01:intron | 35.0% |
| !! | GACATCTTGGTGTTAATGAT+TGG | - | Chr2:75714349-75714368 | MsG0280010845.01.T01:CDS | 35.0% |
| AAAGGATGGACAGCTCTATT+TGG | - | Chr2:75711957-75711976 | MsG0280010845.01.T01:intron | 40.0% | |
| AACTTGATGTCCAAGTGAAG+GGG | - | Chr2:75712334-75712353 | MsG0280010845.01.T01:intron | 40.0% | |
| AAGGACGACGCAAATAGAAA+AGG | - | Chr2:75711786-75711805 | MsG0280010845.01.T01:intron | 40.0% | |
| ACGAAGAAGGAGGAATTCAA+AGG | - | Chr2:75712531-75712550 | MsG0280010845.01.T01:intron | 40.0% | |
| AGAAGGAGGAATTCAAAGGT+CGG | - | Chr2:75712535-75712554 | MsG0280010845.01.T01:intron | 40.0% | |
| AGATAGCTGTGGAACTGTTT+CGG | - | Chr2:75713395-75713414 | MsG0280010845.01.T01:CDS | 40.0% | |
| AGCAGATAGATAACAATGGC+AGG | + | Chr2:75714071-75714090 | None:intergenic | 40.0% | |
| AGCATCTAACACTTGCAATC+TGG | + | Chr2:75713621-75713640 | None:intergenic | 40.0% | |
| CAACTTGATGTCCAAGTGAA+GGG | - | Chr2:75712333-75712352 | MsG0280010845.01.T01:intron | 40.0% | |
| CCAAAAGAGGGTGAATTTGA+AGG | - | Chr2:75712363-75712382 | MsG0280010845.01.T01:intron | 40.0% | |
| CGAAGCAATTTGAAGAACGA+TGG | - | Chr2:75712622-75712641 | MsG0280010845.01.T01:CDS | 40.0% | |
| CGGTTTGATGAAGAAATCCA+AGG | - | Chr2:75711618-75711637 | MsG0280010845.01.T01:intron | 40.0% | |
| CTGCATACTTGTTTCATCAG+TGG | + | Chr2:75713002-75713021 | None:intergenic | 40.0% | |
| GAACATAAGTGGAGCCAAAT+TGG | - | Chr2:75713906-75713925 | MsG0280010845.01.T01:CDS | 40.0% | |
| GAAGCTCACAAGAAAATGCA+GGG | - | Chr2:75711901-75711920 | MsG0280010845.01.T01:intron | 40.0% | |
| GAAGGAGCTAGTGAATGATT+TGG | - | Chr2:75712086-75712105 | MsG0280010845.01.T01:intron | 40.0% | |
| GAAGGGGTTAAAACCAAAAG+AGG | - | Chr2:75712350-75712369 | MsG0280010845.01.T01:intron | 40.0% | |
| GATTCTCAGCAAAATCTGCA+AGG | + | Chr2:75714542-75714561 | None:intergenic | 40.0% | |
| GATTTATCAGTTGACATGGC+AGG | + | Chr2:75711709-75711728 | None:intergenic | 40.0% | |
| GGTATTTGAAAGCCAAGTGA+AGG | - | Chr2:75712068-75712087 | MsG0280010845.01.T01:intron | 40.0% | |
| GTGATAGTATCCTTCCTCTT+TGG | + | Chr2:75711556-75711575 | None:intergenic | 40.0% | |
| TAAGGGTTAATCTTCGGTGA+CGG | + | Chr2:75713202-75713221 | None:intergenic | 40.0% | |
| TATCACACTGCCTGTTAAGA+GGG | - | Chr2:75711570-75711589 | MsG0280010845.01.T01:intron | 40.0% | |
| TATCTGCTATTAGGATGAGG+TGG | - | Chr2:75714083-75714102 | MsG0280010845.01.T01:CDS | 40.0% | |
| TATGGAACTTCGTCAAGTCA+TGG | - | Chr2:75712026-75712045 | MsG0280010845.01.T01:intron | 40.0% | |
| TCAAAAGAGAAGCAGCTTGA+TGG | - | Chr2:75712153-75712172 | MsG0280010845.01.T01:intron | 40.0% | |
| TGCAAGTTCTTTCTTGAGTG+AGG | + | Chr2:75711737-75711756 | None:intergenic | 40.0% | |
| TTGATTCATGTTCCTCCACT+CGG | + | Chr2:75712179-75712198 | None:intergenic | 40.0% | |
| TTTCTATTTGCGTCGTCCTT+TGG | + | Chr2:75711786-75711805 | None:intergenic | 40.0% | |
| TTTGGAAACCACGCTATCAA+AGG | + | Chr2:75711538-75711557 | None:intergenic | 40.0% | |
| ! | CCATTTTCATCCAAAGAACC+AGG | + | Chr2:75713801-75713820 | None:intergenic | 40.0% |
| ! | CCTGGTTCTTTGGATGAAAA+TGG | - | Chr2:75713798-75713817 | MsG0280010845.01.T01:CDS | 40.0% |
| ! | CCTTCAAATTCACCCTCTTT+TGG | + | Chr2:75712366-75712385 | None:intergenic | 40.0% |
| ! | CTGTTTTCGTAATTGATGCC+TGG | - | Chr2:75713780-75713799 | MsG0280010845.01.T01:CDS | 40.0% |
| ! | GGAGTTTAAAACGAAGAAGG+AGG | - | Chr2:75712521-75712540 | MsG0280010845.01.T01:intron | 40.0% |
| ! | GTAATTGATGCCTGGTTCTT+TGG | - | Chr2:75713788-75713807 | MsG0280010845.01.T01:CDS | 40.0% |
| ! | TAAACATGATGGAACACCGA+AGG | - | Chr2:75712752-75712771 | MsG0280010845.01.T01:CDS | 40.0% |
| !!! | TTGGTTTTAACCCCTTCACT+TGG | + | Chr2:75712347-75712366 | None:intergenic | 40.0% |
| AGAGGGTGAATTTGAAGGCA+AGG | - | Chr2:75712368-75712387 | MsG0280010845.01.T01:intron | 45.0% | |
| ATATGATGTTGGGGACACCT+TGG | + | Chr2:75711638-75711657 | None:intergenic | 45.0% | |
| CATTCACTAGCTCCTTCACT+TGG | + | Chr2:75712083-75712102 | None:intergenic | 45.0% | |
| CGAAGCTCACAAGAAAATGC+AGG | - | Chr2:75711900-75711919 | MsG0280010845.01.T01:intron | 45.0% | |
| CTATCACACTGCCTGTTAAG+AGG | - | Chr2:75711569-75711588 | MsG0280010845.01.T01:intron | 45.0% | |
| GAAGGAGGAATTCAAAGGTC+GGG | - | Chr2:75712536-75712555 | MsG0280010845.01.T01:intron | 45.0% | |
| GAAGGAGTTCCAGTCAAAAG+AGG | - | Chr2:75712476-75712495 | MsG0280010845.01.T01:intron | 45.0% | |
| GCAACTTGATGTCCAAGTGA+AGG | - | Chr2:75712332-75712351 | MsG0280010845.01.T01:intron | 45.0% | |
| GCATTTCAAGAGCCAACTGA+AGG | - | Chr2:75712416-75712435 | MsG0280010845.01.T01:intron | 45.0% | |
| GGAATTCAAAGGTCGGGTTA+AGG | - | Chr2:75712542-75712561 | MsG0280010845.01.T01:intron | 45.0% | |
| TAGATTCTAGCCCCTTCAGT+TGG | + | Chr2:75712221-75712240 | None:intergenic | 45.0% | |
| TGCTAGCGACATCATTCTGT+TGG | - | Chr2:75713156-75713175 | MsG0280010845.01.T01:intron | 45.0% | |
| ! | TGATAGCGTGGTTTCCAAAG+AGG | - | Chr2:75711539-75711558 | MsG0280010845.01.T01:intron | 45.0% |
| ! | TTGATTCGAGCTCCTTCAGT+TGG | + | Chr2:75712431-75712450 | None:intergenic | 45.0% |
| AGCGTGGTTTCCAAAGAGGA+AGG | - | Chr2:75711543-75711562 | MsG0280010845.01.T01:intron | 50.0% | |
| CAACACTACAAGGACACTCC+AGG | + | Chr2:75713848-75713867 | None:intergenic | 50.0% | |
| GGAGTTCCAGTCAAAAGAGG+TGG | - | Chr2:75712479-75712498 | MsG0280010845.01.T01:intron | 50.0% | |
| GGATGGACAGCTCTATTTGG+TGG | - | Chr2:75711960-75711979 | MsG0280010845.01.T01:intron | 50.0% | |
| GTGGAACTGTTTCGGACCTT+GGG | - | Chr2:75713403-75713422 | MsG0280010845.01.T01:CDS | 50.0% | |
| TCTGTCAACTCAGGCTCCTT+CGG | + | Chr2:75712771-75712790 | None:intergenic | 50.0% | |
| TGAAGGCAAGGTGAAGAAGC+TGG | - | Chr2:75712380-75712399 | MsG0280010845.01.T01:intron | 50.0% | |
| TGCTCAGCACAAGATAGCTG+TGG | - | Chr2:75713384-75713403 | MsG0280010845.01.T01:CDS | 50.0% | |
| TGTGGAACTGTTTCGGACCT+TGG | - | Chr2:75713402-75713421 | MsG0280010845.01.T01:CDS | 50.0% | |
| TTGACTTAAGCTCCTCCACG+CGG | + | Chr2:75712137-75712156 | None:intergenic | 50.0% | |
| ! | TGGACAGCTCTATTTGGTGG+AGG | - | Chr2:75711963-75711982 | MsG0280010845.01.T01:intron | 50.0% |
| !! | GAAGCATTTTGAAAGCCGCG+TGG | - | Chr2:75712119-75712138 | MsG0280010845.01.T01:intron | 50.0% |
| TGGTCTCCCTTCTTACACCG+TGG | + | Chr2:75713121-75713140 | None:intergenic | 55.0% | |
| ! | GCAGGTTGAAGGAGAAGTCG+AGG | - | Chr2:75712710-75712729 | MsG0280010845.01.T01:CDS | 55.0% |
| !! | GCATTTTGAAAGCCGCGTGG+AGG | - | Chr2:75712122-75712141 | MsG0280010845.01.T01:intron | 55.0% |
| ! | GAAGCAGCTTGATGGCCGAG+TGG | - | Chr2:75712161-75712180 | MsG0280010845.01.T01:intron | 60.0% |
| ! | GCAGCTTGATGGCCGAGTGG+AGG | - | Chr2:75712164-75712183 | MsG0280010845.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 75711373 | 75714629 | 75711373 | ID=MsG0280010845.01;Name=MsG0280010845.01 |
| Chr2 | mRNA | 75711373 | 75714629 | 75711373 | ID=MsG0280010845.01.T01;Parent=MsG0280010845.01;Name=MsG0280010845.01.T01;_AED=0.15;_eAED=0.15;_QI=0|0.5|0|1|0.5|0.33|3|0|672 |
| Chr2 | exon | 75713162 | 75714629 | 75713162 | ID=MsG0280010845.01.T01:exon:11183;Parent=MsG0280010845.01.T01 |
| Chr2 | exon | 75712592 | 75713036 | 75712592 | ID=MsG0280010845.01.T01:exon:11182;Parent=MsG0280010845.01.T01 |
| Chr2 | exon | 75711373 | 75711478 | 75711373 | ID=MsG0280010845.01.T01:exon:11181;Parent=MsG0280010845.01.T01 |
| Chr2 | CDS | 75713162 | 75714629 | 75713162 | ID=MsG0280010845.01.T01:cds;Parent=MsG0280010845.01.T01 |
| Chr2 | CDS | 75712592 | 75713036 | 75712592 | ID=MsG0280010845.01.T01:cds;Parent=MsG0280010845.01.T01 |
| Chr2 | CDS | 75711373 | 75711478 | 75711373 | ID=MsG0280010845.01.T01:cds;Parent=MsG0280010845.01.T01 |
| Gene Sequence |
| Protein sequence |
