AlfalfaGEDB | MsG0280010841.01

M. sativa cultivar ZhongmuNo.1 / MsG0280010841.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010841.01.T01	KEH39288.1	71.017	590	61	7	2	499	1	572	0	707

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010841.01.T01	A0A072VCW3	71.017	590	61	7	2	499	1	572	0.0	707

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000404.01	MsG0280010841.01	0.829936	3.893312e-55	4.043072e-52
MsG0180003741.01	MsG0280010841.01	0.823936	1.058822e-53	9.246420e-51
MsG0180004765.01	MsG0280010841.01	0.822101	2.836868e-53	2.351595e-50
MsG0180005113.01	MsG0280010841.01	0.820430	6.889378e-53	5.450121e-50
MsG0180005153.01	MsG0280010841.01	0.822370	2.455900e-53	2.051812e-50
MsG0280010841.01	MsG0280010845.01	0.803141	4.017017e-49	2.003260e-46
MsG0280010841.01	MsG0380015885.01	0.800761	1.238387e-48	5.813505e-46
MsG0280010841.01	MsG0380017589.01	0.816935	4.278596e-52	3.073424e-49
MsG0280010841.01	MsG0480018218.01	0.803119	4.058842e-49	2.022938e-46
MsG0280010841.01	MsG0480021689.01	0.812305	4.532403e-51	2.871527e-48
MsG0280010841.01	MsG0580024443.01	0.813987	1.937699e-51	1.284314e-48
MsG0280010841.01	MsG0580028960.01	0.802174	6.357095e-49	3.093141e-46
MsG0280010841.01	MsG0680034739.01	0.808829	2.554733e-50	1.475734e-47
MsG0280010841.01	MsG0680035580.01	0.817190	3.750380e-52	2.712618e-49
MsG0280010841.01	MsG0780036766.01	0.802033	6.795587e-49	3.294628e-46
MsG0280010841.01	MsG0780039438.01	0.801713	7.909213e-49	3.803387e-46
MsG0280010841.01	MsG0780041259.01	0.804055	2.595678e-49	1.325296e-46
MsG0280010841.01	MsG0780041475.01	0.804636	1.964051e-49	1.017840e-46
MsG0280010841.01	MsG0880041834.01	0.825346	4.927552e-54	4.479654e-51
MsG0280010841.01	MsG0880042959.01	0.804835	1.785425e-49	9.300883e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010841.01.T01	MTR_2g091315	71.017	590	61	7	2	499	1	572	0.0	707
MsG0280010841.01.T01	MTR_2g093010	61.977	526	140	10	1	486	1	506	1.30e-171	506
MsG0280010841.01.T01	MTR_2g093010	39.910	223	130	2	273	495	447	665	8.43e-28	118
MsG0280010841.01.T01	MTR_2g093010	41.778	225	105	2	288	486	406	630	1.28e-24	108
MsG0280010841.01.T01	MTR_2g093010	37.356	174	89	4	264	433	504	661	3.10e-12	69.7
MsG0280010841.01.T01	MTR_2g093010	61.905	525	140	10	2	486	1	505	1.06e-170	503
MsG0280010841.01.T01	MTR_2g093010	39.910	223	130	2	273	495	446	664	8.13e-28	118
MsG0280010841.01.T01	MTR_2g093010	41.778	225	105	2	288	486	405	629	1.19e-24	108
MsG0280010841.01.T01	MTR_2g093010	37.356	174	89	4	264	433	503	660	2.99e-12	69.7
MsG0280010841.01.T01	MTR_2g091080	63.383	467	143	5	34	486	13	465	1.18e-170	500
MsG0280010841.01.T01	MTR_2g091080	42.138	159	85	1	280	431	441	599	2.11e-18	89.0
MsG0280010841.01.T01	MTR_2g091110	60.619	485	150	6	32	485	11	485	5.08e-157	480
MsG0280010841.01.T01	MTR_2g091110	40.720	361	164	9	174	486	513	871	3.79e-43	164
MsG0280010841.01.T01	MTR_2g091110	44.178	292	110	7	234	486	384	661	1.09e-39	154
MsG0280010841.01.T01	MTR_2g091110	45.378	238	126	1	253	486	690	927	4.87e-39	152
MsG0280010841.01.T01	MTR_2g091110	42.979	235	88	3	264	480	729	935	1.85e-28	120
MsG0280010841.01.T01	MTR_2g091110	37.500	280	135	4	253	492	760	1039	3.59e-25	110
MsG0280010841.01.T01	MTR_2g091245	55.742	418	141	7	32	431	14	405	1.05e-113	350
MsG0280010841.01.T01	MTR_2g091325	43.879	531	217	13	1	486	1	495	5.07e-97	305
MsG0280010841.01.T01	MTR_2g091325	34.226	336	176	10	102	433	260	554	2.40e-14	75.9
MsG0280010841.01.T01	MTR_2g091260	43.163	607	147	15	2	480	1	537	4.21e-96	310
MsG0280010841.01.T01	MTR_2g091260	36.686	169	100	1	301	469	435	596	3.47e-11	66.2
MsG0280010841.01.T01	MTR_2g091010	44.706	510	221	9	25	488	42	536	6.15e-91	293
MsG0280010841.01.T01	MTR_6g045183	45.019	522	209	8	1	488	1	478	4.18e-88	286
MsG0280010841.01.T01	MTR_2g091015	43.123	538	231	13	6	486	6	525	3.21e-87	286
MsG0280010841.01.T01	MTR_2g091015	38.436	307	176	8	188	489	380	678	5.32e-28	119
MsG0280010841.01.T01	MTR_2g091015	36.620	213	125	1	287	489	522	734	6.52e-21	97.1
MsG0280010841.01.T01	MTR_2g091330	43.058	569	165	14	5	480	30	532	2.92e-83	270
MsG0280010841.01.T01	MTR_2g091330	31.373	306	171	7	128	427	319	591	4.07e-12	68.9
MsG0280010841.01.T01	MTR_2g091370	43.843	536	234	10	2	488	1	518	1.06e-82	273
MsG0280010841.01.T01	MTR_2g104190	44.397	464	185	7	2	407	1	449	2.50e-82	268
MsG0280010841.01.T01	MTR_2g091290	43.818	461	225	7	34	478	26	468	9.57e-82	270
MsG0280010841.01.T01	MTR_2g091280	40.370	540	247	9	6	491	6	524	5.52e-79	261
MsG0280010841.01.T01	MTR_2g091280	36.290	372	199	10	134	474	353	717	1.86e-24	107
MsG0280010841.01.T01	MTR_2g091280	37.643	263	137	4	246	488	434	689	8.29e-22	99.8
MsG0280010841.01.T01	MTR_2g091250	43.064	483	154	11	6	479	17	387	3.15e-78	266
MsG0280010841.01.T01	MTR_2g091250	48.792	207	92	1	287	479	615	821	3.97e-35	140
MsG0280010841.01.T01	MTR_2g091250	39.803	304	169	6	197	492	395	692	1.44e-34	139
MsG0280010841.01.T01	MTR_2g091250	44.500	200	111	0	287	486	531	730	1.17e-30	127
MsG0280010841.01.T01	MTR_2g091250	38.947	285	121	5	253	484	661	945	1.78e-29	123
MsG0280010841.01.T01	MTR_2g091250	34.295	312	117	5	253	476	717	1028	4.05e-24	107
MsG0280010841.01.T01	MTR_2g091105	42.038	471	168	10	32	468	15	414	6.90e-72	241
MsG0280010841.01.T01	MTR_2g091335	38.462	494	239	12	2	471	1	453	1.75e-70	236
MsG0280010841.01.T01	MTR_2g091005	39.453	512	249	12	2	486	1	478	1.16e-69	234
MsG0280010841.01.T01	MTR_7g056313	42.819	376	159	6	66	441	50	369	4.22e-64	213
MsG0280010841.01.T01	MTR_2g091030	39.706	476	203	11	2	446	1	423	1.11e-59	207
MsG0280010841.01.T01	MTR_2g091030	35.887	248	146	6	232	478	140	375	1.89e-16	82.4
MsG0280010841.01.T01	MTR_5g078500	40.374	374	139	7	2	366	1	299	1.13e-59	199
MsG0280010841.01.T01	MTR_5g078500	34.254	181	116	2	292	469	124	304	1.14e-12	69.3
MsG0280010841.01.T01	MTR_3g110385	39.655	464	184	10	66	486	34	444	7.10e-59	208
MsG0280010841.01.T01	MTR_3g110385	46.575	219	98	2	287	486	329	547	3.07e-34	137
MsG0280010841.01.T01	MTR_3g110385	42.029	138	75	1	287	419	427	564	7.48e-13	71.6
MsG0280010841.01.T01	MTR_2g091040	38.382	482	181	14	1	455	1	393	5.12e-58	201
MsG0280010841.01.T01	MTR_2g091090	38.589	482	180	14	1	455	1	393	4.97e-57	201
MsG0280010841.01.T01	MTR_5g038810	41.758	364	150	7	50	408	14	320	1.40e-55	197
MsG0280010841.01.T01	MTR_5g038810	32.226	301	180	3	146	440	42	324	2.59e-23	103
MsG0280010841.01.T01	MTR_5g038810	40.099	202	92	7	290	486	81	258	2.48e-17	85.5
MsG0280010841.01.T01	MTR_5g038810	39.634	164	86	2	330	480	145	308	7.94e-15	77.8
MsG0280010841.01.T01	MTR_2g010420	36.842	437	205	7	58	486	62	435	6.74e-53	191
MsG0280010841.01.T01	MTR_2g010420	30.097	412	237	11	113	490	176	570	7.30e-21	96.7
MsG0280010841.01.T01	MTR_2g010420	35.119	168	109	0	287	454	404	571	8.65e-15	77.8
MsG0280010841.01.T01	MTR_2g010420	37.355	431	211	7	58	486	62	435	1.90e-52	190
MsG0280010841.01.T01	MTR_2g010420	30.097	412	237	11	113	490	176	570	7.62e-21	96.7
MsG0280010841.01.T01	MTR_2g010420	35.119	168	109	0	287	454	404	571	7.09e-15	78.2
MsG0280010841.01.T01	MTR_2g091285	35.526	456	208	8	6	425	6	411	5.86e-51	183
MsG0280010841.01.T01	MTR_2g090640	44.951	307	108	4	239	484	101	407	2.22e-43	161
MsG0280010841.01.T01	MTR_2g090640	33.051	354	146	6	169	460	101	425	4.29e-23	102
MsG0280010841.01.T01	MTR_2g090640	44.156	154	69	2	344	480	98	251	1.45e-17	85.9
MsG0280010841.01.T01	MTR_2g090640	38.462	182	64	4	352	486	119	299	1.52e-13	73.2
MsG0280010841.01.T01	MTR_2g091240	41.837	294	121	5	196	474	57	315	8.32e-40	152
MsG0280010841.01.T01	MTR_2g091240	30.000	420	200	13	12	431	3	328	7.93e-18	87.0
MsG0280010841.01.T01	MTR_5g078510	45.662	219	96	4	289	486	1	217	4.29e-27	115
MsG0280010841.01.T01	MTR_5g078510	38.288	222	102	3	287	473	41	262	7.46e-21	96.3
MsG0280010841.01.T01	MTR_5g078510	33.209	268	167	3	213	476	20	279	2.86e-14	75.5
MsG0280010841.01.T01	MTR_5g078510	39.370	127	63	1	375	487	3	129	7.94e-11	64.7
MsG0280010841.01.T01	MTR_2g091025	40.000	195	114	1	296	487	136	330	8.40e-25	108
MsG0280010841.01.T01	MTR_2g091025	34.320	169	94	2	287	438	169	337	1.73e-13	73.2
MsG0280010841.01.T01	MTR_4g084920	39.459	185	101	4	127	309	14	189	1.72e-19	89.7
MsG0280010841.01.T01	MTR_2g091360	43.165	139	69	1	294	432	41	169	7.66e-17	82.0
MsG0280010841.01.T01	MTR_2g091360	38.255	149	83	2	332	474	24	169	4.55e-12	67.4
MsG0280010841.01.T01	MTR_2g103620	49.138	116	47	4	44	153	5	114	1.70e-13	72.4
MsG0280010841.01.T01	MTR_2g064120	58.108	74	24	1	75	141	133	206	1.09e-12	68.6
MsG0280010841.01.T01	MTR_2g103640	37.563	197	100	5	290	480	47	226	6.43e-11	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 87 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCTTCAGTATCTCTCTTTA+TGG	0.145269	2:-75641351	None:intergenic
CGCATCAAGCTCGTTCTCTT+TGG	0.274778	2:-75641696	None:intergenic
GATGCGGTGAACAAATTAAT+TGG	0.305931	2:+75641713	MsG0280010841.01.T01:CDS
CAAGGAGCTGGAATTTAAAA+AGG	0.308710	2:+75642153	MsG0280010841.01.T01:CDS
AACAGAAACATTATGAAAAC+TGG	0.318986	2:+75642212	MsG0280010841.01.T01:CDS
TAAATTCCAGCTCCTTGATT+TGG	0.319233	2:-75642147	None:intergenic
AATTATTTGAGGATTGTAAA+AGG	0.336427	2:+75641297	MsG0280010841.01.T01:CDS
GTTCCTCTTCCTTCCTTTCA+CGG	0.342021	2:-75641625	None:intergenic
TGAATTTACTTTGGAATGTA+AGG	0.352735	2:+75641673	MsG0280010841.01.T01:CDS
CTAAAATACCATCTTTCAAT+TGG	0.362943	2:+75642404	MsG0280010841.01.T01:CDS
CTTTAGCAACTTGTTCCTTT+CGG	0.363271	2:-75641759	None:intergenic
TATTTGATAGAAAACTTGAT+TGG	0.371620	2:+75641503	MsG0280010841.01.T01:CDS
TTCAATTGGTGGATCAGAAA+AGG	0.384755	2:+75642418	MsG0280010841.01.T01:CDS
TATCAAGGAGTTTGTAGTAA+AGG	0.421770	2:+75641469	MsG0280010841.01.T01:CDS
TTGATTTGAGCTCCTCCACT+TGG	0.428961	2:-75642357	None:intergenic
AAATACCATCTTTCAATTGG+TGG	0.441983	2:+75642407	MsG0280010841.01.T01:CDS
GTCCATCTTTGTCTTGATCA+TGG	0.442309	2:-75641199	None:intergenic
CTGATCCACCAATTGAAAGA+TGG	0.446568	2:-75642412	None:intergenic
CTCGAAACCCGGGAAAATCT+TGG	0.447593	2:-75641062	None:intergenic
TTTCTTAACAGAAATATGTA+AGG	0.448562	2:-75641159	None:intergenic
TCAAGAGAGAAGCAGCTTGA+AGG	0.454073	2:+75641956	MsG0280010841.01.T01:CDS
TCAATTGGTGGATCAGAAAA+GGG	0.462098	2:+75642419	MsG0280010841.01.T01:CDS
AAAGATGCAACTTGAAGGTC+GGG	0.465394	2:+75642087	MsG0280010841.01.T01:CDS
ATTTCGTCAAGTCATTGATA+AGG	0.473013	2:+75641601	MsG0280010841.01.T01:CDS
GCTAGTTGAACGACGGGCAA+TGG	0.479453	2:+75642051	MsG0280010841.01.T01:CDS
TTGTGCTCAAATGAAAGAAT+TGG	0.494143	2:+75641805	MsG0280010841.01.T01:CDS
TGAAAGTCAAATGAAGGAGT+TGG	0.496818	2:+75642183	MsG0280010841.01.T01:CDS
TGAAGGCAAAGTGAAGGATC+TGG	0.496975	2:+75642309	MsG0280010841.01.T01:CDS
GAAAGTTGAAGGCCAAATCA+AGG	0.499096	2:+75642135	MsG0280010841.01.T01:CDS
TCAACGAAGAAGCGACTTGA+AGG	0.501483	2:+75641830	MsG0280010841.01.T01:CDS
GCAACATGAAGGCCGGGTGA+TGG	0.501679	2:+75642261	MsG0280010841.01.T01:CDS
GAAGGAGTTTAAATCAAAAG+AGG	0.503664	2:+75642111	MsG0280010841.01.T01:CDS
GAAGGAGTTTGAATCAAAGA+TGG	0.508553	2:+75641985	MsG0280010841.01.T01:CDS
CATCACCAACATAAAATTGA+GGG	0.510264	2:-75640977	None:intergenic
TAAGCAATGTGAAGGATGGC+TGG	0.512398	2:+75641880	MsG0280010841.01.T01:CDS
ATGAGAAGCAACATGAAGGC+CGG	0.512889	2:+75642254	MsG0280010841.01.T01:CDS
TGAAGGCCAAATCAAGGAGC+TGG	0.513684	2:+75642141	MsG0280010841.01.T01:CDS
GCGACTTGAAGGTCAGGTTA+AGG	0.515056	2:+75641841	MsG0280010841.01.T01:CDS
GCTCTTTGAAAGTCAAATGA+AGG	0.517812	2:+75642177	MsG0280010841.01.T01:CDS
TCATCACCAACATAAAATTG+AGG	0.518201	2:-75640978	None:intergenic
TAGTAGTGCTGTTAAGAAGA+GGG	0.518338	2:+75641106	MsG0280010841.01.T01:CDS
GTTGCTTCTCATTTAAGTCA+AGG	0.519662	2:-75642243	None:intergenic
TCAAAAGAGGAGAAAGTTGA+AGG	0.524009	2:+75642124	MsG0280010841.01.T01:CDS
GCTGGAGGACCTTGAGTCAA+AGG	0.524311	2:+75641898	MsG0280010841.01.T01:CDS
AATGCTTCTCCTTTGACTCA+AGG	0.526996	2:-75641907	None:intergenic
CGAAAGGAACAAGTTGCTAA+AGG	0.527653	2:+75641760	MsG0280010841.01.T01:CDS
TCAAAAGAGAGGCAAAATCA+AGG	0.534054	2:+75642376	MsG0280010841.01.T01:CDS
GCTAAAGGTAACCTCCGAAA+AGG	0.534105	2:+75641775	MsG0280010841.01.T01:CDS
AAGGAGTTTGTAGTAAAGGA+AGG	0.534886	2:+75641473	MsG0280010841.01.T01:CDS
GAAGAAGCGACTTGAAGGTC+AGG	0.538700	2:+75641835	MsG0280010841.01.T01:CDS
TGAGAAGCAACATGAAGGCC+GGG	0.540036	2:+75642255	MsG0280010841.01.T01:CDS
AGAGAAGCTAGTTGAACGAC+GGG	0.541148	2:+75642045	MsG0280010841.01.T01:CDS
TCAAAGATGGAGGAACTTGA+AGG	0.541445	2:+75641998	MsG0280010841.01.T01:CDS
TTGCTTCATGCTCCATCACC+CGG	0.542096	2:-75642273	None:intergenic
GCAGCTTGAAGGATATATGA+AGG	0.544518	2:+75641967	MsG0280010841.01.T01:CDS
TCTTTGTCTTGATCATGGTA+AGG	0.549756	2:-75641194	None:intergenic
GTAGTAGTGCTGTTAAGAAG+AGG	0.550710	2:+75641105	MsG0280010841.01.T01:CDS
AAAAGATGCAACTTGAAGGT+CGG	0.554162	2:+75642086	MsG0280010841.01.T01:CDS
TACCATGATCAAGACAAAGA+TGG	0.558214	2:+75641197	MsG0280010841.01.T01:CDS
TGATAAGGACCGTGAAAGGA+AGG	0.560715	2:+75641616	MsG0280010841.01.T01:CDS
GATAGAACTTAATCATGTCA+AGG	0.567093	2:+75641556	MsG0280010841.01.T01:CDS
AGAATTTGAAGGCAAAGTGA+AGG	0.571180	2:+75642303	MsG0280010841.01.T01:CDS
GCAACTTGAAGGTCGGGAGA+AGG	0.574045	2:+75642093	MsG0280010841.01.T01:CDS
AAGATAAGCAATGTGAAGGA+TGG	0.579399	2:+75641876	MsG0280010841.01.T01:CDS
GGAACTTGAAGGTCGTTCAA+AGG	0.580511	2:+75642009	MsG0280010841.01.T01:CDS
TCAAAAGATAAGCAATGTGA+AGG	0.581995	2:+75641872	MsG0280010841.01.T01:CDS
AGAGCGCAAGCTAGAGCTCA+AGG	0.583452	2:+75641526	MsG0280010841.01.T01:CDS
GGACCGTGAAAGGAAGGAAG+AGG	0.585661	2:+75641622	MsG0280010841.01.T01:CDS
ATAGAACTTAATCATGTCAA+GGG	0.590168	2:+75641557	MsG0280010841.01.T01:CDS
AGGAGTTTGTAGTAAAGGAA+GGG	0.593328	2:+75641474	MsG0280010841.01.T01:CDS
GCAAAGGTGAGAGAATTTGA+AGG	0.600132	2:+75642292	MsG0280010841.01.T01:CDS
TGAAGTTCGTGAGAAAGTGC+AGG	0.603159	2:+75641430	MsG0280010841.01.T01:CDS
GAAACATTATGAAAACTGGA+TGG	0.606274	2:+75642216	MsG0280010841.01.T01:CDS
TCATTGATAAGGACCGTGAA+AGG	0.608463	2:+75641612	MsG0280010841.01.T01:CDS
CAGATGAATTAGAGTCCGAA+AGG	0.610216	2:+75641744	MsG0280010841.01.T01:CDS
GGAGTTTGAATCAAAGATGG+AGG	0.617704	2:+75641988	MsG0280010841.01.T01:CDS
CGGGAAAATCTTGGTAACAA+AGG	0.617763	2:-75641053	None:intergenic
TTAAATGAGAAGCAACATGA+AGG	0.618712	2:+75642250	MsG0280010841.01.T01:CDS
AAGGAAGGAAGAGGAACTCA+AGG	0.628919	2:+75641631	MsG0280010841.01.T01:CDS
TATTTCTGTTAAGAAATCAA+AGG	0.629620	2:+75641166	MsG0280010841.01.T01:CDS
GGTGATGGAGCATGAAGCAA+AGG	0.629813	2:+75642276	MsG0280010841.01.T01:CDS
AAGAGAAGCTAGTTGAACGA+CGG	0.649590	2:+75642044	MsG0280010841.01.T01:CDS
AGGAGCTCAAATCAAAAGAG+AGG	0.654158	2:+75642365	MsG0280010841.01.T01:CDS
CAAAGAGAACGAGCTTGATG+CGG	0.668256	2:+75641697	MsG0280010841.01.T01:CDS
TGTAAGGTCTTTCTTCAGCG+AGG	0.674133	2:-75641264	None:intergenic
ACATTATGAAAACTGGATGG+AGG	0.687349	2:+75642219	MsG0280010841.01.T01:CDS
GCAATGTGAAGGATGGCTGG+AGG	0.690972	2:+75641883	MsG0280010841.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATTGATGAATTTACTT+TGG	+	Chr2:75641664-75641683	MsG0280010841.01.T01:CDS	15.0%
!!	ATTGTTAGAAAAATTATTTG+AGG	+	Chr2:75641286-75641305	MsG0280010841.01.T01:CDS	15.0%
!!!	AAGTAAATTCATCAATTTTT+TGG	-	Chr2:75641664-75641683	None:intergenic	15.0%
!!!	AGTAAATTCATCAATTTTTT+GGG	-	Chr2:75641663-75641682	None:intergenic	15.0%
!!!	ATAATTTTTCTAACAATGTA+AGG	-	Chr2:75641283-75641302	None:intergenic	15.0%
!!	AATTATTTGAGGATTGTAAA+AGG	+	Chr2:75641297-75641316	MsG0280010841.01.T01:CDS	20.0%
!!	TATTTGATAGAAAACTTGAT+TGG	+	Chr2:75641503-75641522	MsG0280010841.01.T01:CDS	20.0%
!!	TTTCTTAACAGAAATATGTA+AGG	-	Chr2:75641162-75641181	None:intergenic	20.0%
!!!	AAAAATTGATGATTGTATCA+AGG	+	Chr2:75641454-75641473	MsG0280010841.01.T01:CDS	20.0%
!!!	TATTTCTGTTAAGAAATCAA+AGG	+	Chr2:75641166-75641185	MsG0280010841.01.T01:CDS	20.0%
!	AACAGAAACATTATGAAAAC+TGG	+	Chr2:75642212-75642231	MsG0280010841.01.T01:CDS	25.0%
!	ATAGAACTTAATCATGTCAA+GGG	+	Chr2:75641557-75641576	MsG0280010841.01.T01:CDS	25.0%
!	CTAAAATACCATCTTTCAAT+TGG	+	Chr2:75642404-75642423	MsG0280010841.01.T01:CDS	25.0%
!!!	TGAATTTACTTTGGAATGTA+AGG	+	Chr2:75641673-75641692	MsG0280010841.01.T01:CDS	25.0%
	AAATACCATCTTTCAATTGG+TGG	+	Chr2:75642407-75642426	MsG0280010841.01.T01:CDS	30.0%
	ATTTCGTCAAGTCATTGATA+AGG	+	Chr2:75641601-75641620	MsG0280010841.01.T01:CDS	30.0%
	CATCACCAACATAAAATTGA+GGG	-	Chr2:75640980-75640999	None:intergenic	30.0%
	GAAACATTATGAAAACTGGA+TGG	+	Chr2:75642216-75642235	MsG0280010841.01.T01:CDS	30.0%
	GAAGGAGTTTAAATCAAAAG+AGG	+	Chr2:75642111-75642130	MsG0280010841.01.T01:CDS	30.0%
	GATAGAACTTAATCATGTCA+AGG	+	Chr2:75641556-75641575	MsG0280010841.01.T01:CDS	30.0%
	TATCAAGGAGTTTGTAGTAA+AGG	+	Chr2:75641469-75641488	MsG0280010841.01.T01:CDS	30.0%
	TCAAAAAAGATGCAACTTGA+AGG	+	Chr2:75642082-75642101	MsG0280010841.01.T01:CDS	30.0%
	TCAAAAGATAAGCAATGTGA+AGG	+	Chr2:75641872-75641891	MsG0280010841.01.T01:CDS	30.0%
	TCATCACCAACATAAAATTG+AGG	-	Chr2:75640981-75641000	None:intergenic	30.0%
	TTAAATGAGAAGCAACATGA+AGG	+	Chr2:75642250-75642269	MsG0280010841.01.T01:CDS	30.0%
	TTGTGCTCAAATGAAAGAAT+TGG	+	Chr2:75641805-75641824	MsG0280010841.01.T01:CDS	30.0%
!	CATAACCCTCAATTTTATGT+TGG	+	Chr2:75640972-75640991	MsG0280010841.01.T01:CDS	30.0%
!!!	AATTTTATGTTGGTGATGAG+AGG	+	Chr2:75640982-75641001	MsG0280010841.01.T01:CDS	30.0%
!!!	ATTTTATGTTGGTGATGAGA+GGG	+	Chr2:75640983-75641002	MsG0280010841.01.T01:CDS	30.0%
	AAAAGATGCAACTTGAAGGT+CGG	+	Chr2:75642086-75642105	MsG0280010841.01.T01:CDS	35.0%
	AAGATAAGCAATGTGAAGGA+TGG	+	Chr2:75641876-75641895	MsG0280010841.01.T01:CDS	35.0%
	AAGGAGTTTGTAGTAAAGGA+AGG	+	Chr2:75641473-75641492	MsG0280010841.01.T01:CDS	35.0%
	ACATTATGAAAACTGGATGG+AGG	+	Chr2:75642219-75642238	MsG0280010841.01.T01:CDS	35.0%
	AGAATTTGAAGGCAAAGTGA+AGG	+	Chr2:75642303-75642322	MsG0280010841.01.T01:CDS	35.0%
	AGGAGTTTGTAGTAAAGGAA+GGG	+	Chr2:75641474-75641493	MsG0280010841.01.T01:CDS	35.0%
	CAAGGAGCTGGAATTTAAAA+AGG	+	Chr2:75642153-75642172	MsG0280010841.01.T01:CDS	35.0%
	CTCTTCAGTATCTCTCTTTA+TGG	-	Chr2:75641354-75641373	None:intergenic	35.0%
	GAAGGAGTTTGAATCAAAGA+TGG	+	Chr2:75641985-75642004	MsG0280010841.01.T01:CDS	35.0%
	GATGCGGTGAACAAATTAAT+TGG	+	Chr2:75641713-75641732	MsG0280010841.01.T01:CDS	35.0%
	GTTGCTTCTCATTTAAGTCA+AGG	-	Chr2:75642246-75642265	None:intergenic	35.0%
	TAAATTCCAGCTCCTTGATT+TGG	-	Chr2:75642150-75642169	None:intergenic	35.0%
	TACCATGATCAAGACAAAGA+TGG	+	Chr2:75641197-75641216	MsG0280010841.01.T01:CDS	35.0%
	TCAAAAGAGAGGCAAAATCA+AGG	+	Chr2:75642376-75642395	MsG0280010841.01.T01:CDS	35.0%
	TCAAAAGAGGAGAAAGTTGA+AGG	+	Chr2:75642124-75642143	MsG0280010841.01.T01:CDS	35.0%
	TCTTTGTCTTGATCATGGTA+AGG	-	Chr2:75641197-75641216	None:intergenic	35.0%
	TGAAAGTCAAATGAAGGAGT+TGG	+	Chr2:75642183-75642202	MsG0280010841.01.T01:CDS	35.0%
!	AGCACAATCATTCTCCTTTT+CGG	-	Chr2:75641792-75641811	None:intergenic	35.0%
!	ATTTTTCCAAACTCGAAACC+CGG	-	Chr2:75641076-75641095	None:intergenic	35.0%
!	CTTTAGCAACTTGTTCCTTT+CGG	-	Chr2:75641762-75641781	None:intergenic	35.0%
!	CTTTGTTACCAAGATTTTCC+CGG	+	Chr2:75641054-75641073	MsG0280010841.01.T01:CDS	35.0%
!	GCTCTTTGAAAGTCAAATGA+AGG	+	Chr2:75642177-75642196	MsG0280010841.01.T01:CDS	35.0%
!	TAGTAGTGCTGTTAAGAAGA+GGG	+	Chr2:75641106-75641125	MsG0280010841.01.T01:CDS	35.0%
!	TCAATTGGTGGATCAGAAAA+GGG	+	Chr2:75642419-75642438	MsG0280010841.01.T01:CDS	35.0%
!	TTCAATTGGTGGATCAGAAA+AGG	+	Chr2:75642418-75642437	MsG0280010841.01.T01:CDS	35.0%
!	TTTGTTACCAAGATTTTCCC+GGG	+	Chr2:75641055-75641074	MsG0280010841.01.T01:CDS	35.0%
	AAAGATGCAACTTGAAGGTC+GGG	+	Chr2:75642087-75642106	MsG0280010841.01.T01:CDS	40.0%
	AAGAGAAGCTAGTTGAACGA+CGG	+	Chr2:75642044-75642063	MsG0280010841.01.T01:CDS	40.0%
	AATGCTTCTCCTTTGACTCA+AGG	-	Chr2:75641910-75641929	None:intergenic	40.0%
	AGGAGCTCAAATCAAAAGAG+AGG	+	Chr2:75642365-75642384	MsG0280010841.01.T01:CDS	40.0%
	CAGATGAATTAGAGTCCGAA+AGG	+	Chr2:75641744-75641763	MsG0280010841.01.T01:CDS	40.0%
	CGAAAGGAACAAGTTGCTAA+AGG	+	Chr2:75641760-75641779	MsG0280010841.01.T01:CDS	40.0%
	CTGATCCACCAATTGAAAGA+TGG	-	Chr2:75642415-75642434	None:intergenic	40.0%
	GAAAGTTGAAGGCCAAATCA+AGG	+	Chr2:75642135-75642154	MsG0280010841.01.T01:CDS	40.0%
	GCAAAGGTGAGAGAATTTGA+AGG	+	Chr2:75642292-75642311	MsG0280010841.01.T01:CDS	40.0%
	GCAGCTTGAAGGATATATGA+AGG	+	Chr2:75641967-75641986	MsG0280010841.01.T01:CDS	40.0%
	GGAGTTTGAATCAAAGATGG+AGG	+	Chr2:75641988-75642007	MsG0280010841.01.T01:CDS	40.0%
	GTCCATCTTTGTCTTGATCA+TGG	-	Chr2:75641202-75641221	None:intergenic	40.0%
	TCAAAGATGGAGGAACTTGA+AGG	+	Chr2:75641998-75642017	MsG0280010841.01.T01:CDS	40.0%
	TCATTGATAAGGACCGTGAA+AGG	+	Chr2:75641612-75641631	MsG0280010841.01.T01:CDS	40.0%
!	ACAATCATTCTCCTTTTCGG+AGG	-	Chr2:75641789-75641808	None:intergenic	40.0%
!	CGGGAAAATCTTGGTAACAA+AGG	-	Chr2:75641056-75641075	None:intergenic	40.0%
!	GTAGTAGTGCTGTTAAGAAG+AGG	+	Chr2:75641105-75641124	MsG0280010841.01.T01:CDS	40.0%
!	TTTTTCCAAACTCGAAACCC+GGG	-	Chr2:75641075-75641094	None:intergenic	40.0%
!!	GAAGCATTTTGAAAGCCAAG+TGG	+	Chr2:75642342-75642361	MsG0280010841.01.T01:CDS	40.0%
!!!	AGGAGAAGCATTTTGAGGTA+CGG	+	Chr2:75641918-75641937	MsG0280010841.01.T01:CDS	40.0%
!!!	GTCAAAGGAGAAGCATTTTG+AGG	+	Chr2:75641913-75641932	MsG0280010841.01.T01:CDS	40.0%
	AAGGAAGGAAGAGGAACTCA+AGG	+	Chr2:75641631-75641650	MsG0280010841.01.T01:CDS	45.0%
	AGAGAAGCTAGTTGAACGAC+GGG	+	Chr2:75642045-75642064	MsG0280010841.01.T01:CDS	45.0%
	ATGAGAAGCAACATGAAGGC+CGG	+	Chr2:75642254-75642273	MsG0280010841.01.T01:CDS	45.0%
	CAAAGAGAACGAGCTTGATG+CGG	+	Chr2:75641697-75641716	MsG0280010841.01.T01:CDS	45.0%
	GCTAAAGGTAACCTCCGAAA+AGG	+	Chr2:75641775-75641794	MsG0280010841.01.T01:CDS	45.0%
	GGAACTTGAAGGTCGTTCAA+AGG	+	Chr2:75642009-75642028	MsG0280010841.01.T01:CDS	45.0%
	GTTCCTCTTCCTTCCTTTCA+CGG	-	Chr2:75641628-75641647	None:intergenic	45.0%
	TAAGCAATGTGAAGGATGGC+TGG	+	Chr2:75641880-75641899	MsG0280010841.01.T01:CDS	45.0%
	TCAACGAAGAAGCGACTTGA+AGG	+	Chr2:75641830-75641849	MsG0280010841.01.T01:CDS	45.0%
	TCAAGAGAGAAGCAGCTTGA+AGG	+	Chr2:75641956-75641975	MsG0280010841.01.T01:CDS	45.0%
	TGAAGGCAAAGTGAAGGATC+TGG	+	Chr2:75642309-75642328	MsG0280010841.01.T01:CDS	45.0%
	TGATAAGGACCGTGAAAGGA+AGG	+	Chr2:75641616-75641635	MsG0280010841.01.T01:CDS	45.0%
	TGTAAGGTCTTTCTTCAGCG+AGG	-	Chr2:75641267-75641286	None:intergenic	45.0%
!	TGAAGTTCGTGAGAAAGTGC+AGG	+	Chr2:75641430-75641449	MsG0280010841.01.T01:CDS	45.0%
!	TTGATTTGAGCTCCTCCACT+TGG	-	Chr2:75642360-75642379	None:intergenic	45.0%
!!	GCATTTTGAAAGCCAAGTGG+AGG	+	Chr2:75642345-75642364	MsG0280010841.01.T01:CDS	45.0%
!!!	ATTTTCCCGGGTTTCGAGTT+TGG	+	Chr2:75641067-75641086	MsG0280010841.01.T01:CDS	45.0%
!!!	GCATTTTGAGGTACGGGTAA+AGG	+	Chr2:75641925-75641944	MsG0280010841.01.T01:CDS	45.0%
!!!	GGAGAAGCATTTTGAGGTAC+GGG	+	Chr2:75641919-75641938	MsG0280010841.01.T01:CDS	45.0%
	CGCATCAAGCTCGTTCTCTT+TGG	-	Chr2:75641699-75641718	None:intergenic	50.0%
	CTCGAAACCCGGGAAAATCT+TGG	-	Chr2:75641065-75641084	None:intergenic	50.0%
	GAAGAAGCGACTTGAAGGTC+AGG	+	Chr2:75641835-75641854	MsG0280010841.01.T01:CDS	50.0%
	GCGACTTGAAGGTCAGGTTA+AGG	+	Chr2:75641841-75641860	MsG0280010841.01.T01:CDS	50.0%
	TGAAGGCCAAATCAAGGAGC+TGG	+	Chr2:75642141-75642160	MsG0280010841.01.T01:CDS	50.0%
	TGAGAAGCAACATGAAGGCC+GGG	+	Chr2:75642255-75642274	MsG0280010841.01.T01:CDS	50.0%
	TTGCTTCATGCTCCATCACC+CGG	-	Chr2:75642276-75642295	None:intergenic	50.0%
!!	GGTGATGGAGCATGAAGCAA+AGG	+	Chr2:75642276-75642295	MsG0280010841.01.T01:CDS	50.0%
	AGAGCGCAAGCTAGAGCTCA+AGG	+	Chr2:75641526-75641545	MsG0280010841.01.T01:CDS	55.0%
	GCAACTTGAAGGTCGGGAGA+AGG	+	Chr2:75642093-75642112	MsG0280010841.01.T01:CDS	55.0%
	GCAATGTGAAGGATGGCTGG+AGG	+	Chr2:75641883-75641902	MsG0280010841.01.T01:CDS	55.0%
	GCTAGTTGAACGACGGGCAA+TGG	+	Chr2:75642051-75642070	MsG0280010841.01.T01:CDS	55.0%
	GCTGGAGGACCTTGAGTCAA+AGG	+	Chr2:75641898-75641917	MsG0280010841.01.T01:CDS	55.0%
	GGACCGTGAAAGGAAGGAAG+AGG	+	Chr2:75641622-75641641	MsG0280010841.01.T01:CDS	55.0%
	GCAACATGAAGGCCGGGTGA+TGG	+	Chr2:75642261-75642280	MsG0280010841.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	75640951	75642450	75640951	ID=MsG0280010841.01;Name=MsG0280010841.01
Chr2	mRNA	75640951	75642450	75640951	ID=MsG0280010841.01.T01;Parent=MsG0280010841.01;Name=MsG0280010841.01.T01;_AED=0.40;_eAED=0.40;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|499
Chr2	exon	75640951	75642450	75640951	ID=MsG0280010841.01.T01:exon:11157;Parent=MsG0280010841.01.T01
Chr2	CDS	75640951	75642450	75640951	ID=MsG0280010841.01.T01:cds;Parent=MsG0280010841.01.T01

Gene Sequence

>MsG0280010841.01.T01

ATGATGGATTTTAAGGCTTCTCATAACCCTCAATTTTATGTTGGTGATGAGAGGGAATTTGTTTCTTGTGAGAACTTTAAATCTCAAGATTATGATCATGTTCCTTTGTTACCAAGATTTTCCCGGGTTTCGAGTTTGGAAAAATGTAGTAGTAGTAGTAGTGCTGTTAAGAAGAGGGATTTTGAGTTTGATCATGACAACAACAATTCCTTACATATTTCTGTTAAGAAATCAAAGGTGTCACCTTACCATGATCAAGACAAAGATGGACATGATATTTCATTGTCAAAGAAATTGACTGATAAATCATTTTCCTCGCTGAAGAAAGACCTTACATTGTTAGAAAAATTATTTGAGGATTGTAAAAGGAAGCAGAAAGTTGAAGAGAAGAGATTACAGTCCATAAAGAGAGATACTGAAGAGTGCTTCAAAGAGCTTCAAATTAAGAAGAAGCAAGTTAGCGTTGTTAGAAGAATTGATGAAGTTCGTGAGAAAGTGCAGGAAAAAATTGATGATTGTATCAAGGAGTTTGTAGTAAAGGAAGGGCAGCTCTATTTGATAGAAAACTTGATTGGAGAGCGCAAGCTAGAGCTCAAGGCAAAAGAGATAGAACTTAATCATGTCAAGGGTAACATTTCAAAAGAAATAGAATTTCGTCAAGTCATTGATAAGGACCGTGAAAGGAAGGAAGAGGAACTCAAGGCTCTTTCCCAAAAAATTGATGAATTTACTTTGGAATGTAAGGCCAAAGAGAACGAGCTTGATGCGGTGAACAAATTAATTGGTGAACAAGCAGATGAATTAGAGTCCGAAAGGAACAAGTTGCTAAAGGTAACCTCCGAAAAGGAGAATGATTGTGCTCAAATGAAAGAATTGGAGTCAACGAAGAAGCGACTTGAAGGTCAGGTTAAGGAACTTGAGTCAAAAGATAAGCAATGTGAAGGATGGCTGGAGGACCTTGAGTCAAAGGAGAAGCATTTTGAGGTACGGGTAAAGGAGTTGATGTCAAGAGAGAAGCAGCTTGAAGGATATATGAAGGAGTTTGAATCAAAGATGGAGGAACTTGAAGGTCGTTCAAAGGATGTTGAATCAAAAGAGAAGCTAGTTGAACGACGGGCAATGGAGCTAGAGTCAAAAAAGATGCAACTTGAAGGTCGGGAGAAGGAGTTTAAATCAAAAGAGGAGAAAGTTGAAGGCCAAATCAAGGAGCTGGAATTTAAAAAGGAGCTCTTTGAAAGTCAAATGAAGGAGTTGGAATTAAAACAGAAACATTATGAAAACTGGATGGAGGACCTTGACTTAAATGAGAAGCAACATGAAGGCCGGGTGATGGAGCATGAAGCAAAGGTGAGAGAATTTGAAGGCAAAGTGAAGGATCTGGAATCTAAAAAGAAGCATTTTGAAAGCCAAGTGGAGGAGCTCAAATCAAAAGAGAGGCAAAATCAAGGACAAGCTAAAATACCATCTTTCAATTGGTGGATCAGAAAAGGGAACAATTAA

Protein sequence

>MsG0280010841.01.T01

MMDFKASHNPQFYVGDEREFVSCENFKSQDYDHVPLLPRFSRVSSLEKCSSSSSAVKKRDFEFDHDNNNSLHISVKKSKVSPYHDQDKDGHDISLSKKLTDKSFSSLKKDLTLLEKLFEDCKRKQKVEEKRLQSIKRDTEECFKELQIKKKQVSVVRRIDEVREKVQEKIDDCIKEFVVKEGQLYLIENLIGERKLELKAKEIELNHVKGNISKEIEFRQVIDKDRERKEEELKALSQKIDEFTLECKAKENELDAVNKLIGEQADELESERNKLLKVTSEKENDCAQMKELESTKKRLEGQVKELESKDKQCEGWLEDLESKEKHFEVRVKELMSREKQLEGYMKEFESKMEELEGRSKDVESKEKLVERRAMELESKKMQLEGREKEFKSKEEKVEGQIKELEFKKELFESQMKELELKQKHYENWMEDLDLNEKQHEGRVMEHEAKVREFEGKVKDLESKKKHFESQVEELKSKERQNQGQAKIPSFNWWIRKGNN*