AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010927.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010927.01.T01 MTR_2g094860 86.339 366 32 5 47 396 340 703 0.0 629
MsG0280010927.01.T01 MTR_2g094860 50.000 140 16 2 24 109 143 282 5.41e-27 113
MsG0280010927.01.T01 MTR_4g058730 67.638 343 88 8 13 334 279 619 2.19e-156 454
MsG0280010927.01.T01 MTR_4g058730 42.143 140 27 2 24 109 125 264 1.80e-18 87.8
MsG0280010927.01.T01 MTR_1g064240 65.615 317 94 3 95 396 392 708 7.88e-152 446
MsG0280010927.01.T01 MTR_1g064240 35.762 151 41 3 24 120 137 285 1.71e-13 72.8
MsG0280010927.01.T01 MTR_7g034605 63.430 309 106 2 95 396 372 680 1.26e-137 409
MsG0280010927.01.T01 MTR_2g460590 63.608 316 101 2 95 396 372 687 3.04e-137 408
MsG0280010927.01.T01 MTR_2g460590 39.344 122 25 1 24 96 114 235 3.54e-15 77.8
MsG0280010927.01.T01 MTR_3g109030 62.305 321 102 2 95 396 402 722 8.85e-135 402
MsG0280010927.01.T01 MTR_3g109030 35.714 140 36 2 24 109 144 283 3.40e-13 71.6
MsG0280010927.01.T01 MTR_3g088875 60.494 324 104 3 95 394 364 687 4.26e-132 395
MsG0280010927.01.T01 MTR_4g130820 61.043 326 117 4 79 396 405 728 6.35e-129 388
MsG0280010927.01.T01 MTR_1g028370 58.434 332 118 4 80 396 388 714 8.94e-127 382
MsG0280010927.01.T01 MTR_3g091080 58.434 332 117 5 79 396 387 711 8.71e-125 377
MsG0280010927.01.T01 MTR_7g117310 61.429 280 106 2 97 375 355 633 7.60e-114 347
MsG0280010927.01.T01 MTR_7g117310 61.429 280 106 2 97 375 409 687 2.06e-113 347
MsG0280010927.01.T01 MTR_7g117310 61.429 280 106 2 97 375 421 699 2.27e-113 347
MsG0280010927.01.T01 MTR_8g027755 53.106 322 140 3 83 393 396 717 2.37e-109 337
MsG0280010927.01.T01 MTR_2g081110 45.247 263 137 5 78 336 370 629 3.50e-66 223
MsG0280010927.01.T01 MTR_8g464570 42.647 272 141 6 62 330 368 627 3.64e-62 212
MsG0280010927.01.T01 MTR_7g012260 38.153 249 149 4 95 341 441 686 4.44e-54 191
MsG0280010927.01.T01 MTR_6g477760 39.683 252 134 5 95 335 451 695 1.95e-47 172
MsG0280010927.01.T01 MTR_6g075290 39.847 261 133 5 95 341 314 564 9.54e-45 163
MsG0280010927.01.T01 MTR_6g075290 39.847 261 133 5 95 341 475 725 3.10e-44 163
MsG0280010927.01.T01 MTR_6g075290 39.847 261 133 5 95 341 516 766 4.36e-44 163
MsG0280010927.01.T01 MTR_5g007630 39.382 259 137 7 95 340 485 736 6.16e-43 160
MsG0280010927.01.T01 MTR_6g075440 39.600 250 131 7 99 335 494 736 7.76e-42 157
MsG0280010927.01.T01 MTR_6g075440 39.370 254 134 7 95 335 490 736 9.02e-42 157
MsG0280010927.01.T01 MTR_6g076060 39.837 246 128 7 97 329 220 458 8.16e-40 148
MsG0280010927.01.T01 MTR_6g075390 39.048 210 107 7 97 293 435 636 4.21e-34 134
MsG0280010927.01.T01 MTR_6g075410 33.735 249 140 9 96 330 420 657 2.10e-26 111
MsG0280010927.01.T01 MTR_2g094810 46.789 109 9 1 36 95 12 120 5.44e-20 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010927.01.T01 AT2G28260 65.974 385 99 7 30 396 268 638 4.48e-166 480
MsG0280010927.01.T01 AT2G28260 32.749 171 61 2 24 140 94 264 2.16e-16 81.6
MsG0280010927.01.T01 AT2G28260 65.974 385 99 7 30 396 308 678 1.49e-165 480
MsG0280010927.01.T01 AT2G28260 32.749 171 61 2 24 140 134 304 2.29e-16 81.6
MsG0280010927.01.T01 AT1G19780 60.767 339 108 4 79 393 196 533 1.90e-134 396
MsG0280010927.01.T01 AT4G30560 61.963 326 109 5 79 396 386 704 5.16e-134 400
MsG0280010927.01.T01 AT4G30560 61.963 326 109 5 79 396 386 704 5.16e-134 400
MsG0280010927.01.T01 AT4G30560 61.963 326 109 5 79 396 386 704 5.16e-134 400
MsG0280010927.01.T01 AT2G23980 61.377 334 112 4 79 396 386 718 5.41e-134 400
MsG0280010927.01.T01 AT2G23980 33.884 121 31 1 24 95 143 263 1.54e-11 66.6
MsG0280010927.01.T01 AT4G30560 61.963 326 109 5 79 396 412 730 6.65e-134 400
MsG0280010927.01.T01 AT4G30560 61.963 326 109 5 79 396 412 730 6.65e-134 400
MsG0280010927.01.T01 AT2G23980 61.377 334 112 4 79 396 413 745 1.09e-133 400
MsG0280010927.01.T01 AT2G23980 33.884 121 31 1 24 95 170 290 1.46e-11 66.6
MsG0280010927.01.T01 AT2G23980 61.377 334 112 4 79 396 413 745 1.09e-133 400
MsG0280010927.01.T01 AT2G23980 33.884 121 31 1 24 95 170 290 1.46e-11 66.6
MsG0280010927.01.T01 AT2G23980 61.377 334 112 4 79 396 413 745 1.09e-133 400
MsG0280010927.01.T01 AT2G23980 33.884 121 31 1 24 95 170 290 1.46e-11 66.6
MsG0280010927.01.T01 AT2G23980 61.377 334 112 4 79 396 413 745 1.09e-133 400
MsG0280010927.01.T01 AT2G23980 33.884 121 31 1 24 95 170 290 1.46e-11 66.6
MsG0280010927.01.T01 AT2G23980 61.377 334 112 4 79 396 413 745 1.09e-133 400
MsG0280010927.01.T01 AT2G23980 33.884 121 31 1 24 95 170 290 1.46e-11 66.6
MsG0280010927.01.T01 AT4G30360 62.069 319 104 2 95 396 399 717 1.89e-133 399
MsG0280010927.01.T01 AT2G23980 61.377 334 112 4 79 396 436 768 3.05e-133 400
MsG0280010927.01.T01 AT2G23980 33.600 125 34 1 24 99 170 294 3.61e-12 68.6
MsG0280010927.01.T01 AT2G23980 61.377 334 112 4 79 396 436 768 3.05e-133 400
MsG0280010927.01.T01 AT2G23980 33.600 125 34 1 24 99 170 294 3.61e-12 68.6
MsG0280010927.01.T01 AT2G23980 61.377 334 112 4 79 396 436 768 3.05e-133 400
MsG0280010927.01.T01 AT2G23980 33.600 125 34 1 24 99 170 294 3.61e-12 68.6
MsG0280010927.01.T01 AT2G23980 61.377 334 112 4 79 396 436 768 3.05e-133 400
MsG0280010927.01.T01 AT2G23980 33.600 125 34 1 24 99 170 294 3.61e-12 68.6
MsG0280010927.01.T01 AT5G57940 61.231 325 115 3 79 396 397 717 5.52e-133 398
MsG0280010927.01.T01 AT5G57940 61.231 325 115 3 79 396 397 717 5.52e-133 398
MsG0280010927.01.T01 AT5G57940 61.231 325 115 3 79 396 390 710 6.85e-133 397
MsG0280010927.01.T01 AT1G19780 60.767 339 108 4 79 393 407 744 1.60e-132 398
MsG0280010927.01.T01 AT1G19780 34.711 121 30 1 24 95 164 284 6.71e-12 67.8
MsG0280010927.01.T01 AT1G15990 60.177 339 113 4 79 396 401 738 7.10e-132 395
MsG0280010927.01.T01 AT1G15990 34.711 121 30 1 24 95 158 278 7.08e-12 67.8
MsG0280010927.01.T01 AT2G24610 57.941 340 115 4 83 394 384 723 5.74e-130 390
MsG0280010927.01.T01 AT2G24610 57.941 340 115 4 83 394 399 738 1.25e-129 390
MsG0280010927.01.T01 AT5G14870 55.043 347 119 4 85 394 354 700 9.66e-127 381
MsG0280010927.01.T01 AT5G14870 35.172 145 40 2 18 108 100 244 3.95e-13 71.6
MsG0280010927.01.T01 AT5G53130 58.485 330 122 4 79 396 389 715 2.98e-122 370
MsG0280010927.01.T01 AT3G48010 70.248 242 72 0 95 336 375 616 4.88e-121 367
MsG0280010927.01.T01 AT4G01010 59.801 301 116 3 97 394 394 692 4.91e-120 364
MsG0280010927.01.T01 AT4G01010 59.801 301 116 3 97 394 394 692 4.91e-120 364
MsG0280010927.01.T01 AT1G01340 56.825 315 116 4 97 394 388 699 1.05e-117 358
MsG0280010927.01.T01 AT1G01340 56.825 315 116 4 97 394 393 704 1.14e-117 358
MsG0280010927.01.T01 AT2G46430 56.678 307 121 4 97 393 397 701 1.65e-111 342
MsG0280010927.01.T01 AT2G46430 56.678 307 121 4 97 393 397 701 1.65e-111 342
MsG0280010927.01.T01 AT2G46440 49.383 324 146 7 55 364 124 443 5.33e-86 268
MsG0280010927.01.T01 AT2G46440 49.383 324 146 7 55 364 302 621 3.02e-84 269
MsG0280010927.01.T01 AT2G46450 40.240 333 171 9 55 373 279 597 2.16e-66 222
MsG0280010927.01.T01 AT2G46450 40.240 333 171 9 55 373 266 584 2.93e-66 221
MsG0280010927.01.T01 AT2G46450 40.240 333 171 9 55 373 302 620 3.49e-66 222
MsG0280010927.01.T01 AT2G46450 40.240 333 171 9 55 373 302 620 3.49e-66 222
MsG0280010927.01.T01 AT5G54250 42.913 254 138 5 87 336 404 654 6.29e-60 206
MsG0280010927.01.T01 AT5G54250 42.913 254 138 5 87 336 404 654 6.29e-60 206
MsG0280010927.01.T01 AT5G54250 42.913 254 138 5 87 336 404 654 6.29e-60 206
MsG0280010927.01.T01 AT5G54250 41.339 254 137 6 87 336 404 649 1.12e-54 192
MsG0280010927.01.T01 AT5G15410 38.793 232 137 4 95 324 448 676 1.06e-49 179
MsG0280010927.01.T01 AT5G15410 38.793 232 137 4 95 324 449 677 1.15e-49 179
MsG0280010927.01.T01 AT3G17690 40.408 245 130 7 95 330 479 716 1.64e-44 164
MsG0280010927.01.T01 AT3G17700 40.909 242 123 7 95 324 512 745 1.16e-41 156
MsG0280010927.01.T01 AT3G17690 42.236 161 86 3 95 255 479 632 6.93e-33 130
MsG0280010927.01.T01 AT3G17700 41.975 162 87 3 95 256 512 666 1.47e-31 127

Find 87 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAAATATAATCAATATAAA+TGG 0.208829 2:-77073659 MsG0280010927.01.T01:CDS
AAAGGTGTTAATATGCATTC+TGG 0.262434 2:-77072602 MsG0280010927.01.T01:CDS
CGAATAGACTCTCGTAGTTC+TGG 0.297309 2:+77073681 None:intergenic
AAGGACTTCCGCTGGATCTT+AGG 0.302671 2:-77073599 MsG0280010927.01.T01:CDS
CACACTTGGTCTTGGATCTA+AGG 0.318439 2:+77072958 None:intergenic
CTAGCATTCTTTCATCCATT+TGG 0.323336 2:+77073182 None:intergenic
CCTATTCTAAGATCGCTCTT+AGG 0.351411 2:-77075579 MsG0280010927.01.T01:CDS
GAAATGCTCTTCATAATTAG+AGG 0.358622 2:-77073082 MsG0280010927.01.T01:CDS
TCCATAACCTTGACGGATTC+GGG 0.360869 2:+77078111 None:intergenic
ACCCGAATCCGTCAAGGTTA+TGG 0.367088 2:-77078112 MsG0280010927.01.T01:CDS
ATCCATAACCTTGACGGATT+CGG 0.371643 2:+77078110 None:intergenic
TGCTGCATTGCCTCTTCCTC+AGG 0.378993 2:-77075524 MsG0280010927.01.T01:intron
CAAGGGTTGCAAGGAATACT+AGG 0.391426 2:-77072625 MsG0280010927.01.T01:CDS
GGTTCCCTTGTTTGACCAAA+TGG 0.396986 2:-77073197 MsG0280010927.01.T01:CDS
ATTCACACCAATGGAGAACT+TGG 0.401526 2:-77072796 MsG0280010927.01.T01:CDS
ATGAAGAGCATTTCGTTCAC+TGG 0.405862 2:+77073091 None:intergenic
CTTGATTCATACACAACAAA+TGG 0.422331 2:-77073055 MsG0280010927.01.T01:CDS
GGGAGTATCACACTTGGTCT+TGG 0.424283 2:+77072950 None:intergenic
TTATGTTGCTCCTTCTTCCA+AGG 0.452854 2:-77075629 MsG0280010927.01.T01:CDS
CTTTGTCTTGAACTAGTTCG+AGG 0.455073 2:-77073558 MsG0280010927.01.T01:CDS
CCTAAGAGCGATCTTAGAAT+AGG 0.455565 2:+77075579 None:intergenic
CATGGAGAAGGCACAAGAAA+AGG 0.459490 2:-77072751 MsG0280010927.01.T01:CDS
GGAAAGAAGCTGCTGAATTG+AGG 0.459874 2:-77072730 MsG0280010927.01.T01:CDS
AAGGTGTTAATATGCATTCT+GGG 0.461316 2:-77072601 MsG0280010927.01.T01:CDS
GAAAGAAGCTGCTGAATTGA+GGG 0.466076 2:-77072729 MsG0280010927.01.T01:CDS
TTTGATTTCTCATCCACGTT+GGG 0.472249 2:-77078083 MsG0280010927.01.T01:intron
TAAATATAATCAATATAAAT+GGG 0.474688 2:-77073658 MsG0280010927.01.T01:CDS
CAACCTCATGCTTTACATGT+TGG 0.485217 2:-77074975 MsG0280010927.01.T01:CDS
TTCTTCAACTCATGTAGAAT+CGG 0.487881 2:-77073019 MsG0280010927.01.T01:CDS
TTCATCCATTTGGTCAAACA+AGG 0.490363 2:+77073192 None:intergenic
TTGTGATATACTTACATGGC+TGG 0.497168 2:+77074952 None:intergenic
CTCATAGGTACCTGAGGAAG+AGG 0.499692 2:+77075514 None:intergenic
TTAACTGTTCTTGTTGAGGA+AGG 0.505244 2:+77072929 None:intergenic
GGCGAACGGTTATCGATTGA+AGG 0.506157 2:+77073766 None:intergenic
AATCACATCCATAACCTTGA+CGG 0.508706 2:+77078104 None:intergenic
GAATCTTGTGGCAGCTTCAG+AGG 0.513529 2:-77072699 MsG0280010927.01.T01:CDS
AGCTGCTGAATTGAGGGCTA+AGG 0.522860 2:-77072723 MsG0280010927.01.T01:CDS
TTATTCAAGCTGCATGGAGA+AGG 0.526489 2:-77072763 MsG0280010927.01.T01:CDS
TTGTTACAGAACAGCATGGC+AGG 0.529700 2:-77075007 MsG0280010927.01.T01:CDS
CGCTCTTAGGTACTTCAGCA+AGG 0.534603 2:-77075566 MsG0280010927.01.T01:CDS
AACTCATGTAGAATCGGTCC+AGG 0.535190 2:-77073013 MsG0280010927.01.T01:CDS
AGCTTTAACTGTTCTTGTTG+AGG 0.541957 2:+77072925 None:intergenic
TAACTGTTCTTGTTGAGGAA+GGG 0.543680 2:+77072930 None:intergenic
TCTTCTCAAAGGACTTCCGC+TGG 0.553705 2:-77073607 MsG0280010927.01.T01:CDS
TAACCGTTCGCCTAGAAGAG+TGG 0.555914 2:-77073755 MsG0280010927.01.T01:CDS
TGTAAGGATGAGCATGAGAC+GGG 0.557355 2:-77078137 None:intergenic
TTTATGGAACAAGGGTTGCA+AGG 0.560809 2:-77072634 MsG0280010927.01.T01:CDS
TCTTCACCACAGAAATCGCC+TGG 0.562215 2:+77072995 None:intergenic
TTCACACCAATGGAGAACTT+GGG 0.569483 2:-77072795 MsG0280010927.01.T01:CDS
AAGCAGCCCAAGTTCTCCAT+TGG 0.571876 2:+77072789 None:intergenic
GTTCCCTCAGTGCATAATGC+AGG 0.571915 2:+77073136 None:intergenic
ACAACAAATGGAGGCCGTGA+CGG 0.574379 2:-77073043 MsG0280010927.01.T01:CDS
GAGGAAGAAGATCTTCTCAA+AGG 0.575171 2:-77073618 MsG0280010927.01.T01:CDS
ATTTGATTTCTCATCCACGT+TGG 0.582690 2:-77078084 MsG0280010927.01.T01:CDS
CGGGATACCCGAATCCGTCA+AGG 0.594748 2:-77078118 MsG0280010927.01.T01:CDS
GCTCTTAGGTACTTCAGCAA+GGG 0.598148 2:-77075565 MsG0280010927.01.T01:CDS
GGTGGCTACACGAGGAGTAG+AGG 0.598943 2:-77073637 MsG0280010927.01.T01:CDS
ATCTTCAGCTATGAGTGCAA+AGG 0.605237 2:+77072886 None:intergenic
GGAACTTATCTTGTTCGCGA+AGG 0.606182 2:-77073118 MsG0280010927.01.T01:CDS
CCTCCACTCTTCTAGGCGAA+CGG 0.606995 2:+77073752 None:intergenic
TTGTTGTGTATGAATCAAGA+TGG 0.607110 2:+77073059 None:intergenic
GTGGTGAAGAGCTCTTAACA+TGG 0.607722 2:-77072982 MsG0280010927.01.T01:CDS
CTGTAAGGATGAGCATGAGA+CGG 0.611364 2:-77078138 None:intergenic
TCATCCATTTGGTCAAACAA+GGG 0.614441 2:+77073193 None:intergenic
GACTACATAGTAAACAACTT+AGG 0.617133 2:-77072835 MsG0280010927.01.T01:CDS
AAGCCTGCATTATGCACTGA+GGG 0.618536 2:-77073139 MsG0280010927.01.T01:CDS
CGTTCGCCTAGAAGAGTGGA+GGG 0.636612 2:-77073751 MsG0280010927.01.T01:CDS
AAAGAACTGACACAGAACAA+TGG 0.642598 2:-77073725 MsG0280010927.01.T01:CDS
ATAGACTCTCGTAGTTCTGG+AGG 0.643923 2:+77073684 None:intergenic
ATCGGTCCAGGCGATTTCTG+TGG 0.645701 2:-77073001 MsG0280010927.01.T01:CDS
GATTCATACACAACAAATGG+AGG 0.646565 2:-77073052 MsG0280010927.01.T01:CDS
CCGTTCGCCTAGAAGAGTGG+AGG 0.650459 2:-77073752 MsG0280010927.01.T01:CDS
ATATAATCAATATAAATGGG+TGG 0.651864 2:-77073655 MsG0280010927.01.T01:CDS
GAGGGCTAAGGAGAATCTTG+TGG 0.656336 2:-77072711 MsG0280010927.01.T01:CDS
TGGTGAAGAGCTCTTAACAT+GGG 0.661791 2:-77072981 MsG0280010927.01.T01:CDS
CTCGAACTAGTTCAAGACAA+AGG 0.662676 2:+77073559 None:intergenic
ATTTCTCTCCTAAGATCCAG+CGG 0.666530 2:+77073591 None:intergenic
GTTGCAAGGAATACTAGGAA+AGG 0.669215 2:-77072620 MsG0280010927.01.T01:CDS
GAGGAAGGGAGTATCACACT+TGG 0.674478 2:+77072944 None:intergenic
AGGTGTTAATATGCATTCTG+GGG 0.675385 2:-77072600 MsG0280010927.01.T01:CDS
TATAAATGGGTGGCTACACG+AGG 0.677991 2:-77073645 MsG0280010927.01.T01:CDS
ATGAGTTGAAGAATCCGTCA+CGG 0.683468 2:+77073029 None:intergenic
TACCCTGCTTATACCCAACG+TGG 0.703352 2:+77078070 None:intergenic
GGGGTTGTTACAGAACAGCA+TGG 0.708891 2:-77075011 MsG0280010927.01.T01:CDS
GAACTAGTTCAAGACAAAGG+TGG 0.711572 2:+77073562 None:intergenic
TGGCCAACATGTAAAGCATG+AGG 0.724789 2:+77074972 None:intergenic
AAAGCCTGCATTATGCACTG+AGG 0.736004 2:-77073140 MsG0280010927.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTACTTATTAATTCTTAT+TGG - Chr2:77073527-77073546 MsG0280010927.01.T01:intron 10.0%
!! GTAAATATAATCAATATAAA+TGG - Chr2:77077021-77077040 MsG0280010927.01.T01:intron 10.0%
!! TATGAAAAATATAAAAATCT+AGG + Chr2:77073708-77073727 None:intergenic 10.0%
!!! TATTTTCATATAAGTTAAAA+GGG + Chr2:77075787-77075806 None:intergenic 10.0%
!! AATGAAATAGCAAAAAAATA+TGG - Chr2:77078009-77078028 MsG0280010927.01.T01:intron 15.0%
!! ATAACGGTTATATAAATATA+AGG + Chr2:77073135-77073154 None:intergenic 15.0%
!! ATGAAATAGCAAAAAAATAT+GGG - Chr2:77078010-77078029 MsG0280010927.01.T01:intron 15.0%
!! CTTATAAACAAATATAAACT+TGG + Chr2:77077164-77077183 None:intergenic 15.0%
!!! ATATATTGTCAATTTTTAGA+TGG + Chr2:77073213-77073232 None:intergenic 15.0%
!!! CTATTTTCATATAAGTTAAA+AGG + Chr2:77075788-77075807 None:intergenic 15.0%
!!! CTGAATATCATTTTTTTTTT+TGG - Chr2:77077393-77077412 MsG0280010927.01.T01:intron 15.0%
!!! CTTTTCATTTTATTTTTCAT+AGG - Chr2:77074613-77074632 MsG0280010927.01.T01:intron 15.0%
!!! TATAATGATAATGATAACAT+TGG - Chr2:77073425-77073444 MsG0280010927.01.T01:intron 15.0%
!!! TTATATTCTGAATAGATTTT+AGG - Chr2:77076038-77076057 MsG0280010927.01.T01:intron 15.0%
!! AAAATTGCTTAAATGTATTG+TGG + Chr2:77074414-77074433 None:intergenic 20.0%
!! AAATATAATGTATTCACTCT+TGG - Chr2:77076405-77076424 MsG0280010927.01.T01:intron 20.0%
!! AATAAATAACGACAAACATT+AGG - Chr2:77073787-77073806 MsG0280010927.01.T01:intron 20.0%
!! ATAAAAGTAGAGTATGAAAA+CGG - Chr2:77072645-77072664 MsG0280010927.01.T01:CDS 20.0%
!! ATAGAAATCAAAGTCAAATT+CGG - Chr2:77077223-77077242 MsG0280010927.01.T01:intron 20.0%
!! ATATAAAGTATGAGTAAGTT+TGG + Chr2:77076024-77076043 None:intergenic 20.0%
!! ATATAATCAATATAAATGGG+TGG - Chr2:77077025-77077044 MsG0280010927.01.T01:intron 20.0%
!! ATATATATTCCAACACAAAA+GGG + Chr2:77074206-77074225 None:intergenic 20.0%
!! CTAACTTATTAATTGTTAAC+AGG - Chr2:77077462-77077481 MsG0280010927.01.T01:intron 20.0%
!! GATTTGAAAACTAAAAGAAA+TGG + Chr2:77074006-77074025 None:intergenic 20.0%
!! GTTATATAAATATAAGGTTG+TGG + Chr2:77073129-77073148 None:intergenic 20.0%
!! GTTATTTATTCTATTATTGC+AGG - Chr2:77075501-77075520 MsG0280010927.01.T01:intron 20.0%
!!! ATACTATTCCATATTTTAAG+GGG - Chr2:77074034-77074053 MsG0280010927.01.T01:intron 20.0%
!!! ATCTACTTTAGAATCATAAA+TGG - Chr2:77073642-77073661 MsG0280010927.01.T01:CDS 20.0%
!!! GATACTATTCCATATTTTAA+GGG - Chr2:77074033-77074052 MsG0280010927.01.T01:intron 20.0%
!!! GTCTGTTTTTTATGTTTAAA+AGG - Chr2:77075188-77075207 MsG0280010927.01.T01:intron 20.0%
!!! TCATTTTTCAATATATTCCT+AGG - Chr2:77075601-77075620 MsG0280010927.01.T01:CDS 20.0%
!!! TGATAAAGGTACTTTAATAA+AGG + Chr2:77073327-77073346 None:intergenic 20.0%
!!! TGATACTATTCCATATTTTA+AGG - Chr2:77074032-77074051 MsG0280010927.01.T01:intron 20.0%
!!! TTCTTTTAGTTTTCAAATCT+TGG - Chr2:77074007-77074026 MsG0280010927.01.T01:intron 20.0%
! AAAAAATGATATTCAGTCAG+AGG + Chr2:77077389-77077408 None:intergenic 25.0%
! AAACAGAATACAGATATAGA+GGG + Chr2:77073047-77073066 None:intergenic 25.0%
! AACATAAAAAACAGACTCAT+AGG + Chr2:77075184-77075203 None:intergenic 25.0%
! ACACATTCTTGTTCAAATAT+CGG - Chr2:77074323-77074342 MsG0280010927.01.T01:intron 25.0%
! AGAAGAAAAAGCAACAAAAT+TGG + Chr2:77074236-77074255 None:intergenic 25.0%
! AGTATTAATACCTTTCTGTT+TGG - Chr2:77076461-77076480 MsG0280010927.01.T01:intron 25.0%
! ATACTATAAGTCAAACTGAT+CGG - Chr2:77073597-77073616 MsG0280010927.01.T01:CDS 25.0%
! ATAGAAATCATTTCTTACGT+TGG - Chr2:77076639-77076658 MsG0280010927.01.T01:intron 25.0%
! ATAGCAAAAAAATATGGGAA+AGG - Chr2:77078015-77078034 MsG0280010927.01.T01:intron 25.0%
! ATTATTATACCAACACTTAG+GGG - Chr2:77075535-77075554 MsG0280010927.01.T01:CDS 25.0%
! CACATTGAAAAACAAATAAC+TGG - Chr2:77073871-77073890 MsG0280010927.01.T01:intron 25.0%
! CATATATATTCCAACACAAA+AGG + Chr2:77074207-77074226 None:intergenic 25.0%
! GAAGAGAAATTTGATTCTTT+GGG - Chr2:77074464-77074483 MsG0280010927.01.T01:intron 25.0%
! GAGAAATCAAATTGTCAATA+TGG - Chr2:77076124-77076143 MsG0280010927.01.T01:intron 25.0%
! GATTATTATACCAACACTTA+GGG - Chr2:77075534-77075553 MsG0280010927.01.T01:CDS 25.0%
! GTTACTCACATTAATATATG+TGG - Chr2:77072730-77072749 MsG0280010927.01.T01:CDS 25.0%
! TATATCAACTAGATAAAGCA+AGG + Chr2:77076371-77076390 None:intergenic 25.0%
! TATCACAAACTATATTTCCT+TGG - Chr2:77075743-77075762 MsG0280010927.01.T01:intron 25.0%
! TCATTTGTTCGTAATTAGAT+AGG + Chr2:77075375-77075394 None:intergenic 25.0%
! TGAAGAGAAATTTGATTCTT+TGG - Chr2:77074463-77074482 MsG0280010927.01.T01:intron 25.0%
! TTAGAATCCTAAATGTATGA+CGG + Chr2:77075449-77075468 None:intergenic 25.0%
! TTGTAGTAGTAACTTGATAA+AGG + Chr2:77073341-77073360 None:intergenic 25.0%
! TTTACAATTTGTGATGAAAG+TGG + Chr2:77075642-77075661 None:intergenic 25.0%
! TTTCAATGTGACTTTGATAT+TGG + Chr2:77073861-77073880 None:intergenic 25.0%
!! AAATGATGATGAAAAAACGA+AGG + Chr2:77075587-77075606 None:intergenic 25.0%
!! ATGTTTAGTTTCTTTGTTTG+TGG - Chr2:77074887-77074906 MsG0280010927.01.T01:intron 25.0%
!! ATTTTCTCATACGATTCAAT+TGG + Chr2:77076849-77076868 None:intergenic 25.0%
!! CGAAATTCAAGTTATATTAG+AGG + Chr2:77076886-77076905 None:intergenic 25.0%
!! GAATTTGACTTTGATTTCTA+TGG + Chr2:77077224-77077243 None:intergenic 25.0%
!! GGAATTTTGAATGTTATTGA+GGG + Chr2:77074543-77074562 None:intergenic 25.0%
!! TAGTTTGTGATATACTTACA+TGG + Chr2:77075735-77075754 None:intergenic 25.0%
!! TGGAATTTTCTCACTTTAAT+TGG - Chr2:77074172-77074191 MsG0280010927.01.T01:intron 25.0%
!! TGGAATTTTGAATGTTATTG+AGG + Chr2:77074544-77074563 None:intergenic 25.0%
!! TGGTTAATTTATTTCTCTTC+TGG - Chr2:77076612-77076631 MsG0280010927.01.T01:intron 25.0%
!! TTCAAGTTATATTAGAGGTA+TGG + Chr2:77076881-77076900 None:intergenic 25.0%
!! TTTAAGGATGTTCGTAATTT+TGG + Chr2:77075264-77075283 None:intergenic 25.0%
!!! ATTTTAGTTTAGGCCAAATT+TGG + Chr2:77075905-77075924 None:intergenic 25.0%
!!! CATTAGGATACATTTTAGTT+AGG - Chr2:77073803-77073822 MsG0280010927.01.T01:intron 25.0%
!!! CTTATTCCACATTTTAGTTT+AGG + Chr2:77075915-77075934 None:intergenic 25.0%
!!! TAGAAGTACTTATTGAAGAA+TGG + Chr2:77076290-77076309 None:intergenic 25.0%
!!! TTAGTTTCTAGCATGTATAA+CGG + Chr2:77073151-77073170 None:intergenic 25.0%
!!! TTCGTAATTTTGGTTAACTT+AGG + Chr2:77075254-77075273 None:intergenic 25.0%
!!! TTTTGTTGTTTATGGAACAA+GGG - Chr2:77078038-77078057 MsG0280010927.01.T01:intron 25.0%
AATATATCAAAGATCGCGAT+GGG + Chr2:77077201-77077220 None:intergenic 30.0%
ACAAATTGTAAAAGCTACAG+GGG - Chr2:77075650-77075669 MsG0280010927.01.T01:CDS 30.0%
AGTATGAGTAAGTTTGGAAA+TGG + Chr2:77076018-77076037 None:intergenic 30.0%
AGTGTTAGTATTAGATCCTA+GGG - Chr2:77074824-77074843 MsG0280010927.01.T01:intron 30.0%
ATAAGTACTTCTATTGTCTC+TGG - Chr2:77076297-77076316 MsG0280010927.01.T01:intron 30.0%
ATTAATACCTTTCTGTTTGG+AGG - Chr2:77076464-77076483 MsG0280010927.01.T01:intron 30.0%
ATTTGGCCTAAACTAAAATG+TGG - Chr2:77075906-77075925 MsG0280010927.01.T01:intron 30.0%
CAAACAGAATACAGATATAG+AGG + Chr2:77073048-77073067 None:intergenic 30.0%
CACAAATTGTAAAAGCTACA+GGG - Chr2:77075649-77075668 MsG0280010927.01.T01:CDS 30.0%
CATCTCCTAGTTATTTAGTT+CGG - Chr2:77075287-77075306 MsG0280010927.01.T01:intron 30.0%
CTAATCAGTACTAAATAGCT+TGG + Chr2:77074564-77074583 None:intergenic 30.0%
CTAATTCAACCCTATAAAAC+TGG + Chr2:77076721-77076740 None:intergenic 30.0%
CTCTATATCTGTATTCTGTT+TGG - Chr2:77073046-77073065 MsG0280010927.01.T01:CDS 30.0%
CTTGATTCATACACAACAAA+TGG - Chr2:77077625-77077644 MsG0280010927.01.T01:intron 30.0%
GAAATGCTCTTCATAATTAG+AGG - Chr2:77077598-77077617 MsG0280010927.01.T01:intron 30.0%
GACTACATAGTAAACAACTT+AGG - Chr2:77077845-77077864 MsG0280010927.01.T01:intron 30.0%
GGATTATTATACCAACACTT+AGG - Chr2:77075533-77075552 MsG0280010927.01.T01:CDS 30.0%
GTTACCATCATTGATATTTG+TGG - Chr2:77074388-77074407 MsG0280010927.01.T01:intron 30.0%
TAAACGATCAAACTAACTAG+CGG + Chr2:77075327-77075346 None:intergenic 30.0%
TCAAAAGCAGATATAAACGA+AGG + Chr2:77076786-77076805 None:intergenic 30.0%
TCACAAATTGTAAAAGCTAC+AGG - Chr2:77075648-77075667 MsG0280010927.01.T01:CDS 30.0%
TCCATTCAATTAAACCAAAC+TGG + Chr2:77072988-77073007 None:intergenic 30.0%
TCTTGACGTTTATTGATAGA+AGG + Chr2:77076076-77076095 None:intergenic 30.0%
TGACAATTCAAGGATCAAAA+CGG + Chr2:77075214-77075233 None:intergenic 30.0%
TTAACCTGCTTATCCAAATT+TGG - Chr2:77075889-77075908 MsG0280010927.01.T01:intron 30.0%
TTAATACCTTTCTGTTTGGA+GGG - Chr2:77076465-77076484 MsG0280010927.01.T01:intron 30.0%
TTCAATTAAACCAAACTGGT+CGG + Chr2:77072984-77073003 None:intergenic 30.0%
TTCTTACGTTGGATGAAATA+TGG - Chr2:77076650-77076669 MsG0280010927.01.T01:intron 30.0%
TTCTTCAACTCATGTAGAAT+CGG - Chr2:77077661-77077680 MsG0280010927.01.T01:intron 30.0%
TTGTTGTGTATGAATCAAGA+TGG + Chr2:77077624-77077643 None:intergenic 30.0%
TTTATTTGCAACTTGCAAGT+AGG + Chr2:77072710-77072729 None:intergenic 30.0%
! AAGGTGTTAATATGCATTCT+GGG - Chr2:77078079-77078098 MsG0280010927.01.T01:intron 30.0%
! ACCAGTTTGGTTTAATTGAA+TGG - Chr2:77072984-77073003 MsG0280010927.01.T01:CDS 30.0%
! CACTTTTATCGGAGAAATAA+TGG - Chr2:77076520-77076539 MsG0280010927.01.T01:intron 30.0%
! CTTCTTACTAGCACTTTTAT+CGG - Chr2:77076509-77076528 MsG0280010927.01.T01:intron 30.0%
! GAAGAAGTTTGCATTGATAT+TGG - Chr2:77074942-77074961 MsG0280010927.01.T01:intron 30.0%
! GTTTGGTTTAATTGAATGGA+TGG - Chr2:77072988-77073007 MsG0280010927.01.T01:CDS 30.0%
! TAACTAGGAGATGCATTTTA+AGG + Chr2:77075280-77075299 None:intergenic 30.0%
! TCAGATTTTATTCACACCAA+TGG - Chr2:77077875-77077894 MsG0280010927.01.T01:intron 30.0%
! TGTGGGAATTTTTGATATTC+AGG + Chr2:77074651-77074670 None:intergenic 30.0%
! TTGATAATCCAAGATCTGAA+AGG - Chr2:77074502-77074521 MsG0280010927.01.T01:intron 30.0%
!! AAAGGTGTTAATATGCATTC+TGG - Chr2:77078078-77078097 MsG0280010927.01.T01:intron 30.0%
!! ACCTTTCAAACCAGTTTTAT+AGG - Chr2:77076708-77076727 MsG0280010927.01.T01:intron 30.0%
!! CCTTTCAAACCAGTTTTATA+GGG - Chr2:77076709-77076728 MsG0280010927.01.T01:intron 30.0%
!! TATTATTGCAGGTGTTGATT+TGG - Chr2:77075512-77075531 MsG0280010927.01.T01:intron 30.0%
!!! AAGAGTTTTTGTTGTTTGTC+CGG + Chr2:77073100-77073119 None:intergenic 30.0%
!!! AAGCATTCTTTTGAGACTTT+TGG + Chr2:77074732-77074751 None:intergenic 30.0%
!!! GTTTTGTTGTTTATGGAACA+AGG - Chr2:77078037-77078056 MsG0280010927.01.T01:intron 30.0%
AAAACTAAACTAACTCCCCT+CGG - Chr2:77073021-77073040 MsG0280010927.01.T01:CDS 35.0%
AAAGAACTGACACAGAACAA+TGG - Chr2:77076955-77076974 MsG0280010927.01.T01:intron 35.0%
AAGGTGAAATACCACATTGA+TGG - Chr2:77074683-77074702 MsG0280010927.01.T01:intron 35.0%
AATCACATCCATAACCTTGA+CGG + Chr2:77072579-77072598 None:intergenic 35.0%
ACTGGCAAATAAAAGAACAG+TGG + Chr2:77074915-77074934 None:intergenic 35.0%
AGGTGTTAATATGCATTCTG+GGG - Chr2:77078080-77078099 MsG0280010927.01.T01:intron 35.0%
AGTCTCAAAAGAATGCTTCA+AGG - Chr2:77074734-77074753 MsG0280010927.01.T01:intron 35.0%
ATATATCAAAGATCGCGATG+GGG + Chr2:77077200-77077219 None:intergenic 35.0%
ATATTCCAACACAAAAGGGA+AGG + Chr2:77074202-77074221 None:intergenic 35.0%
ATCATGATTGACAGTTGTGT+AGG + Chr2:77073568-77073587 None:intergenic 35.0%
CACTCTTGGAAGCTAAAAAA+TGG - Chr2:77076419-77076438 MsG0280010927.01.T01:intron 35.0%
CCTTGGTTGTTCAAACAAAT+TGG - Chr2:77075760-77075779 MsG0280010927.01.T01:intron 35.0%
CTAGCATTCTTTCATCCATT+TGG + Chr2:77077501-77077520 None:intergenic 35.0%
CTCACAGTTGTTAGATCATT+TGG - Chr2:77074983-77075002 MsG0280010927.01.T01:CDS 35.0%
GAATATATCAAAGATCGCGA+TGG + Chr2:77077202-77077221 None:intergenic 35.0%
GAATGTTATTGAGGGAGTTT+AGG + Chr2:77074535-77074554 None:intergenic 35.0%
GAGAACCGAACTAAATAACT+AGG + Chr2:77075295-77075314 None:intergenic 35.0%
GAGTGTTAGTATTAGATCCT+AGG - Chr2:77074823-77074842 MsG0280010927.01.T01:intron 35.0%
GATTCATACACAACAAATGG+AGG - Chr2:77077628-77077647 MsG0280010927.01.T01:intron 35.0%
GCATCAGCATATATACCAAA+CGG + Chr2:77076242-77076261 None:intergenic 35.0%
GGAAAAATCAAATACAGCCT+AGG + Chr2:77075621-77075640 None:intergenic 35.0%
GTAGAGTATGAAAACGGAAA+AGG - Chr2:77072651-77072670 MsG0280010927.01.T01:CDS 35.0%
GTGTTAGTATTAGATCCTAG+GGG - Chr2:77074825-77074844 MsG0280010927.01.T01:intron 35.0%
TAACTGTTCTTGTTGAGGAA+GGG + Chr2:77077753-77077772 None:intergenic 35.0%
TATACCAAACGGATAAAAGC+CGG + Chr2:77076231-77076250 None:intergenic 35.0%
TATGTGGAAATGAACCCATT+TGG - Chr2:77072746-77072765 MsG0280010927.01.T01:CDS 35.0%
TCAAAAATTCCCACAACAAG+TGG - Chr2:77074656-77074675 MsG0280010927.01.T01:intron 35.0%
TCAGAAAAATCAGGTTCTGT+TGG + Chr2:77078126-77078145 None:intergenic 35.0%
TCATCCATTTGGTCAAACAA+GGG + Chr2:77077490-77077509 None:intergenic 35.0%
TGACAACATCTGACAATTCA+AGG + Chr2:77075224-77075243 None:intergenic 35.0%
TTAACCATAATACTTGCCTC+AGG + Chr2:77076337-77076356 None:intergenic 35.0%
TTAACTGTTCTTGTTGAGGA+AGG + Chr2:77077754-77077773 None:intergenic 35.0%
TTCATCCATTTGGTCAAACA+AGG + Chr2:77077491-77077510 None:intergenic 35.0%
TTGGAACTTTGTTCAGGTAT+TGG + Chr2:77074713-77074732 None:intergenic 35.0%
TTGTGATATACTTACATGGC+TGG + Chr2:77075731-77075750 None:intergenic 35.0%
! ACAAATTTGTTCACCAATGC+CGG - Chr2:77076209-77076228 MsG0280010927.01.T01:intron 35.0%
! AGCTTTAACTGTTCTTGTTG+AGG + Chr2:77077758-77077777 None:intergenic 35.0%
! ATAAACGTCAAGAAGCATGT+TGG - Chr2:77076083-77076102 MsG0280010927.01.T01:intron 35.0%
! ATTCTTTGGGAAACCAGTAT+GGG - Chr2:77074477-77074496 MsG0280010927.01.T01:intron 35.0%
! ATTGCTGATTGGTAATATGC+AGG - Chr2:77076583-77076602 MsG0280010927.01.T01:intron 35.0%
! ATTTGATTTCTCATCCACGT+TGG - Chr2:77072596-77072615 MsG0280010927.01.T01:CDS 35.0%
! CCAATTTGTTTGAACAACCA+AGG + Chr2:77075763-77075782 None:intergenic 35.0%
! TTGGAAAAGTGTGTGCAATA+TGG - Chr2:77076102-77076121 MsG0280010927.01.T01:intron 35.0%
! TTTGATTTCTCATCCACGTT+GGG - Chr2:77072597-77072616 MsG0280010927.01.T01:CDS 35.0%
!! AATAGATTTTAGGAGCTTGC+TGG - Chr2:77076048-77076067 MsG0280010927.01.T01:intron 35.0%
!! ACTGTTCTTTTATTTGCCAG+TGG - Chr2:77074914-77074933 MsG0280010927.01.T01:intron 35.0%
!! CCCTATAAAACTGGTTTGAA+AGG + Chr2:77076712-77076731 None:intergenic 35.0%
!!! AGACTTTTGGAACTTTGTTC+AGG + Chr2:77074719-77074738 None:intergenic 35.0%
!!! CTTGTTTTATTCAAGCTGCA+TGG - Chr2:77077911-77077930 MsG0280010927.01.T01:intron 35.0%
!!! GGGAAAGGTTTTGTTGTTTA+TGG - Chr2:77078030-77078049 MsG0280010927.01.T01:intron 35.0%
AAACACGTGTACAGATTCCA+TGG - Chr2:77072826-77072845 MsG0280010927.01.T01:CDS 40.0%
AAAGATCTGCGACTATGATC+TGG + Chr2:77077303-77077322 None:intergenic 40.0%
ACGAACAAATGATACGCTCA+AGG - Chr2:77075383-77075402 MsG0280010927.01.T01:intron 40.0%
AGTACTTCTATTGTCTCTGG+TGG - Chr2:77076300-77076319 MsG0280010927.01.T01:intron 40.0%
AGTGAAAGAAGGAATGGCTA+TGG + Chr2:77072953-77072972 None:intergenic 40.0%
AGTGACACCGTCATACATTT+AGG - Chr2:77075439-77075458 MsG0280010927.01.T01:intron 40.0%
ATCTTCAGCTATGAGTGCAA+AGG + Chr2:77077797-77077816 None:intergenic 40.0%
ATGAACTAGAAACCAGTTGG+AGG + Chr2:77074111-77074130 None:intergenic 40.0%
ATTAAACCAAACTGGTCGGT+TGG + Chr2:77072980-77072999 None:intergenic 40.0%
ATTCACACCAATGGAGAACT+TGG - Chr2:77077884-77077903 MsG0280010927.01.T01:intron 40.0%
ATTTCTCTCCTAAGATCCAG+CGG + Chr2:77077092-77077111 None:intergenic 40.0%
CAAACTTCTTCTCTAACCAC+TGG + Chr2:77074933-77074952 None:intergenic 40.0%
CAACCTCATGCTTTACATGT+TGG - Chr2:77075705-77075724 MsG0280010927.01.T01:intron 40.0%
CCTAAGAGCGATCTTAGAAT+AGG + Chr2:77075104-77075123 None:intergenic 40.0%
CCTATGAACTAGAAACCAGT+TGG + Chr2:77074114-77074133 None:intergenic 40.0%
CTACCAAAAACCTTGGAAGA+AGG + Chr2:77075064-77075083 None:intergenic 40.0%
CTCGAACTAGTTCAAGACAA+AGG + Chr2:77077124-77077143 None:intergenic 40.0%
CTGTATTCTGTTTGGCAGTA+TGG - Chr2:77073054-77073073 MsG0280010927.01.T01:CDS 40.0%
CTTTGTCTTGAACTAGTTCG+AGG - Chr2:77077122-77077141 MsG0280010927.01.T01:intron 40.0%
GAAACACACCTTTCAGATCT+TGG + Chr2:77074513-77074532 None:intergenic 40.0%
GAAAGAAGCTGCTGAATTGA+GGG - Chr2:77077951-77077970 MsG0280010927.01.T01:intron 40.0%
GAACTAGTTCAAGACAAAGG+TGG + Chr2:77077121-77077140 None:intergenic 40.0%
GAATGGCGATGATGTAACTT+CGG + Chr2:77076273-77076292 None:intergenic 40.0%
GAGGAAGAAGATCTTCTCAA+AGG - Chr2:77077062-77077081 MsG0280010927.01.T01:intron 40.0%
GCTATAAACCAAGCTACTCT+CGG + Chr2:77076181-77076200 None:intergenic 40.0%
GTACTTCTATTGTCTCTGGT+GGG - Chr2:77076301-77076320 MsG0280010927.01.T01:intron 40.0%
GTCACACTCCCCTTAAAATA+TGG + Chr2:77074045-77074064 None:intergenic 40.0%
GTGGCCACAAATATCAATGA+TGG + Chr2:77074395-77074414 None:intergenic 40.0%
GTTGCAAGGAATACTAGGAA+AGG - Chr2:77078060-77078079 MsG0280010927.01.T01:intron 40.0%
TACTTCTATTGTCTCTGGTG+GGG - Chr2:77076302-77076321 MsG0280010927.01.T01:intron 40.0%
TAGGCCAAATTTGGATAAGC+AGG + Chr2:77075896-77075915 None:intergenic 40.0%
TATGTGAAATGATCGATCCG+AGG + Chr2:77072888-77072907 None:intergenic 40.0%
TGATGTAACTTCGGAAGTCA+TGG + Chr2:77076264-77076283 None:intergenic 40.0%
TGGATTATCAAACCCCATAC+TGG + Chr2:77074493-77074512 None:intergenic 40.0%
TGGTGAAGAGCTCTTAACAT+GGG - Chr2:77077699-77077718 MsG0280010927.01.T01:intron 40.0%
TTATGTTGCTCCTTCTTCCA+AGG - Chr2:77075051-77075070 MsG0280010927.01.T01:intron 40.0%
TTATTCAAGCTGCATGGAGA+AGG - Chr2:77077917-77077936 MsG0280010927.01.T01:intron 40.0%
TTCACACCAATGGAGAACTT+GGG - Chr2:77077885-77077904 MsG0280010927.01.T01:intron 40.0%
TTCTCCTCTACCAAAAACCT+TGG + Chr2:77075071-77075090 None:intergenic 40.0%
TTGCAAGTAGGCATGACAAT+GGG + Chr2:77072698-77072717 None:intergenic 40.0%
TTTATGGAACAAGGGTTGCA+AGG - Chr2:77078046-77078065 MsG0280010927.01.T01:intron 40.0%
! ATGAGTTGAAGAATCCGTCA+CGG + Chr2:77077654-77077673 None:intergenic 40.0%
! GATTCTTTGGGAAACCAGTA+TGG - Chr2:77074476-77074495 MsG0280010927.01.T01:intron 40.0%
! GGACATTTTCGTATTTGCCA+TGG + Chr2:77075566-77075585 None:intergenic 40.0%
! GTACTTTTCGCATTGCTGAT+TGG - Chr2:77076572-77076591 MsG0280010927.01.T01:intron 40.0%
! GTATTGGTGTTCCATCAATG+TGG + Chr2:77074697-77074716 None:intergenic 40.0%
! TTCTTTGGGAAACCAGTATG+GGG - Chr2:77074478-77074497 MsG0280010927.01.T01:intron 40.0%
!! ACCTTAACTCCACTTGTTGT+GGG + Chr2:77074668-77074687 None:intergenic 40.0%
!! ATCCATAACCTTGACGGATT+CGG + Chr2:77072573-77072592 None:intergenic 40.0%
!! ATGAAGAGCATTTCGTTCAC+TGG + Chr2:77077592-77077611 None:intergenic 40.0%
!! CCAACTGGTTTCTAGTTCAT+AGG - Chr2:77074111-77074130 MsG0280010927.01.T01:intron 40.0%
!! CCTATTCTAAGATCGCTCTT+AGG - Chr2:77075101-77075120 MsG0280010927.01.T01:intron 40.0%
!! TGGTTTCTAGTTCATAGGTG+TGG - Chr2:77074116-77074135 MsG0280010927.01.T01:intron 40.0%
!! TTTCTAGTTCATAGGTGTGG+AGG - Chr2:77074119-77074138 MsG0280010927.01.T01:intron 40.0%
!!! TCTTCCAAGGTTTTTGGTAG+AGG - Chr2:77075064-77075083 MsG0280010927.01.T01:intron 40.0%
AAACGGATAAAAGCCGGCAT+TGG + Chr2:77076225-77076244 None:intergenic 45.0%
AAAGCCTGCATTATGCACTG+AGG - Chr2:77077540-77077559 MsG0280010927.01.T01:intron 45.0%
AACACTTAGGGGTTCAACCA+TGG - Chr2:77075546-77075565 MsG0280010927.01.T01:CDS 45.0%
AACAGACTCATAGGTACCTG+AGG + Chr2:77075175-77075194 None:intergenic 45.0%
AACATGAGCTGGAGATGTAG+GGG - Chr2:77072782-77072801 MsG0280010927.01.T01:CDS 45.0%
AACTCATGTAGAATCGGTCC+AGG - Chr2:77077667-77077686 MsG0280010927.01.T01:intron 45.0%
AAGCCTGCATTATGCACTGA+GGG - Chr2:77077541-77077560 MsG0280010927.01.T01:intron 45.0%
AAGTAGGCATGACAATGGGA+CGG + Chr2:77072694-77072713 None:intergenic 45.0%
AATACAGATATAGAGGGCCG+AGG + Chr2:77073041-77073060 None:intergenic 45.0%
AATACTGCAACTCCTCCAAC+TGG - Chr2:77074096-77074115 MsG0280010927.01.T01:intron 45.0%
ATACAGATATAGAGGGCCGA+GGG + Chr2:77073040-77073059 None:intergenic 45.0%
ATCCACGTTGGGTATAAGCA+GGG - Chr2:77072608-77072627 MsG0280010927.01.T01:CDS 45.0%
ATGGTTGAACCCCTAAGTGT+TGG + Chr2:77075547-77075566 None:intergenic 45.0%
ATTGTCTCTGGTGGGGATTA+AGG - Chr2:77076309-77076328 MsG0280010927.01.T01:intron 45.0%
CAAGGGTTGCAAGGAATACT+AGG - Chr2:77078055-77078074 MsG0280010927.01.T01:intron 45.0%
CGAAGGATGCATGTGTTTCA+CGG + Chr2:77076769-77076788 None:intergenic 45.0%
CGAATAGACTCTCGTAGTTC+TGG + Chr2:77077002-77077021 None:intergenic 45.0%
CTGTTTGGCAGTATGGCTAA+TGG - Chr2:77073061-77073080 MsG0280010927.01.T01:CDS 45.0%
CTTGCAAGTAGGCATGACAA+TGG + Chr2:77072699-77072718 None:intergenic 45.0%
GAACATGAGCTGGAGATGTA+GGG - Chr2:77072781-77072800 MsG0280010927.01.T01:CDS 45.0%
GATAAGTTGCTTGCAGCAGA+GGG - Chr2:77074141-77074160 MsG0280010927.01.T01:intron 45.0%
GCTCTTAGGTACTTCAGCAA+GGG - Chr2:77075115-77075134 MsG0280010927.01.T01:intron 45.0%
GGAAAGAAGCTGCTGAATTG+AGG - Chr2:77077950-77077969 MsG0280010927.01.T01:intron 45.0%
GGAACCTGAGGCAAGTATTA+TGG - Chr2:77076330-77076349 MsG0280010927.01.T01:intron 45.0%
GGAACTTATCTTGTTCGCGA+AGG - Chr2:77077562-77077581 MsG0280010927.01.T01:intron 45.0%
GGAGAGAGTGAAAGAAGGAA+TGG + Chr2:77072959-77072978 None:intergenic 45.0%
GTGGTGAAGAGCTCTTAACA+TGG - Chr2:77077698-77077717 MsG0280010927.01.T01:intron 45.0%
TATAAATGGGTGGCTACACG+AGG - Chr2:77077035-77077054 MsG0280010927.01.T01:intron 45.0%
TCCCACAACAAGTGGAGTTA+AGG - Chr2:77074664-77074683 MsG0280010927.01.T01:intron 45.0%
TGATCTGGATCGCAACATCA+AGG + Chr2:77077288-77077307 None:intergenic 45.0%
TGGCCAACATGTAAAGCATG+AGG + Chr2:77075711-77075730 None:intergenic 45.0%
TGGTAATATGCAGGTAAGCG+TGG - Chr2:77076592-77076611 MsG0280010927.01.T01:intron 45.0%
TGTGGTTGCAACTCTTGGAT+TGG - Chr2:77076550-77076569 MsG0280010927.01.T01:intron 45.0%
TTGGGTATAAGCAGGGTAAC+AGG - Chr2:77072615-77072634 MsG0280010927.01.T01:CDS 45.0%
TTGTTACAGAACAGCATGGC+AGG - Chr2:77075673-77075692 MsG0280010927.01.T01:intron 45.0%
! CACCTTAACTCCACTTGTTG+TGG + Chr2:77074669-77074688 None:intergenic 45.0%
! CATGGAGAAGGCACAAGAAA+AGG - Chr2:77077929-77077948 MsG0280010927.01.T01:intron 45.0%
! GCTCCTTCTTCCAAGGTTTT+TGG - Chr2:77075058-77075077 MsG0280010927.01.T01:intron 45.0%
! GGTACTTCAGCAAGGGTTTT+TGG - Chr2:77075122-77075141 MsG0280010927.01.T01:intron 45.0%
! GGTTCCCTTGTTTGACCAAA+TGG - Chr2:77077483-77077502 MsG0280010927.01.T01:intron 45.0%
! TCAATGATGGTAACGCGCAA+AGG + Chr2:77074382-77074401 None:intergenic 45.0%
! TTTGGAGGGTGCAGTTCTTT+GGG - Chr2:77076479-77076498 MsG0280010927.01.T01:intron 45.0%
! TTTTCACCCTCCACTCTTCT+AGG + Chr2:77076938-77076957 None:intergenic 45.0%
!! ATAGACTCTCGTAGTTCTGG+AGG + Chr2:77076999-77077018 None:intergenic 45.0%
!! CACACTTGGTCTTGGATCTA+AGG + Chr2:77077725-77077744 None:intergenic 45.0%
!! TCCATAACCTTGACGGATTC+GGG + Chr2:77072572-77072591 None:intergenic 45.0%
!!! AATGCCGGCTTTTATCCGTT+TGG - Chr2:77076224-77076243 MsG0280010927.01.T01:intron 45.0%
!!! GTTTTTGTTGTTTGTCCGGC+AGG + Chr2:77073096-77073115 None:intergenic 45.0%
!! ATAATAATAAGATATAAATA+AGG + Chr2:77073921-77073940 None:intergenic 5.0%
!! TAAATATAATCAATATAAAT+GGG - Chr2:77077022-77077041 MsG0280010927.01.T01:intron 5.0%
!! TATTTATAATATAATCATAT+AGG + Chr2:77073973-77073992 None:intergenic 5.0%
!!! TAATACTTTATTTTTTTTTA+CGG + Chr2:77073368-77073387 None:intergenic 5.0%
AACCCATTTGGCATGAGCCA+TGG - Chr2:77072758-77072777 MsG0280010927.01.T01:CDS 50.0%
AACTCCTCTCCTTTCCTCCT+CGG - Chr2:77072868-77072887 MsG0280010927.01.T01:CDS 50.0%
AAGATGCTCCGAGAGTAGCT+TGG - Chr2:77076170-77076189 MsG0280010927.01.T01:intron 50.0%
AAGCAGCCCAAGTTCTCCAT+TGG + Chr2:77077894-77077913 None:intergenic 50.0%
AAGGACTTCCGCTGGATCTT+AGG - Chr2:77077081-77077100 MsG0280010927.01.T01:intron 50.0%
ACAACAAATGGAGGCCGTGA+CGG - Chr2:77077637-77077656 MsG0280010927.01.T01:intron 50.0%
ACCCATTTGGCATGAGCCAT+GGG - Chr2:77072759-77072778 MsG0280010927.01.T01:CDS 50.0%
ACCCGAATCCGTCAAGGTTA+TGG - Chr2:77072568-77072587 MsG0280010927.01.T01:CDS 50.0%
ACTGCACCCTCCAAACAGAA+AGG + Chr2:77076474-77076493 None:intergenic 50.0%
AGCTGCTGAATTGAGGGCTA+AGG - Chr2:77077957-77077976 MsG0280010927.01.T01:intron 50.0%
ATCTCCAGCTCATGTTCCCA+TGG + Chr2:77072778-77072797 None:intergenic 50.0%
ATGATCGATCCGAGGAGGAA+AGG + Chr2:77072880-77072899 None:intergenic 50.0%
CATCCACGTTGGGTATAAGC+AGG - Chr2:77072607-77072626 MsG0280010927.01.T01:CDS 50.0%
CGATGTATGAGTTGTCCCCT+AGG + Chr2:77074843-77074862 None:intergenic 50.0%
CGCTCTTAGGTACTTCAGCA+AGG - Chr2:77075114-77075133 MsG0280010927.01.T01:intron 50.0%
CGGTTGGAGAGAGTGAAAGA+AGG + Chr2:77072964-77072983 None:intergenic 50.0%
CTCATAGGTACCTGAGGAAG+AGG + Chr2:77075169-77075188 None:intergenic 50.0%
GAATCTTGTGGCAGCTTCAG+AGG - Chr2:77077981-77078000 MsG0280010927.01.T01:intron 50.0%
GAGGGCTAAGGAGAATCTTG+TGG - Chr2:77077969-77077988 MsG0280010927.01.T01:intron 50.0%
GGAACATGAGCTGGAGATGT+AGG - Chr2:77072780-77072799 MsG0280010927.01.T01:CDS 50.0%
GGATAAGTTGCTTGCAGCAG+AGG - Chr2:77074140-77074159 MsG0280010927.01.T01:intron 50.0%
GGGGACAACTCATACATCGT+TGG - Chr2:77074844-77074863 MsG0280010927.01.T01:intron 50.0%
GGGGTTGTTACAGAACAGCA+TGG - Chr2:77075669-77075688 MsG0280010927.01.T01:intron 50.0%
GTGAAATGATCGATCCGAGG+AGG + Chr2:77072885-77072904 None:intergenic 50.0%
GTTCCCTCAGTGCATAATGC+AGG + Chr2:77077547-77077566 None:intergenic 50.0%
GTTTGTCCGGCAGGTAAGTA+GGG + Chr2:77073087-77073106 None:intergenic 50.0%
TAACCGTTCGCCTAGAAGAG+TGG - Chr2:77076925-77076944 MsG0280010927.01.T01:intron 50.0%
TAATGGCCCTACTTACCTGC+CGG - Chr2:77073078-77073097 MsG0280010927.01.T01:CDS 50.0%
TACAGATATAGAGGGCCGAG+GGG + Chr2:77073039-77073058 None:intergenic 50.0%
TACCCTGCTTATACCCAACG+TGG + Chr2:77072613-77072632 None:intergenic 50.0%
TCCCATGGCTCATGCCAAAT+GGG + Chr2:77072763-77072782 None:intergenic 50.0%
TCTTCACCACAGAAATCGCC+TGG + Chr2:77077688-77077707 None:intergenic 50.0%
TCTTCTCAAAGGACTTCCGC+TGG - Chr2:77077073-77077092 MsG0280010927.01.T01:intron 50.0%
TGCAGCAGAGGGAAATGCTT+TGG - Chr2:77074152-77074171 MsG0280010927.01.T01:intron 50.0%
TGTCTCCACAACCGTGATTG+TGG + Chr2:77077258-77077277 None:intergenic 50.0%
TGTTTGTCCGGCAGGTAAGT+AGG + Chr2:77073088-77073107 None:intergenic 50.0%
TTCCCATGGCTCATGCCAAA+TGG + Chr2:77072764-77072783 None:intergenic 50.0%
! GGCGAACGGTTATCGATTGA+AGG + Chr2:77076917-77076936 None:intergenic 50.0%
! GTGCTCCTTCCCTTTTGTGT+TGG - Chr2:77074194-77074213 MsG0280010927.01.T01:intron 50.0%
! GTTTGGAGGGTGCAGTTCTT+TGG - Chr2:77076478-77076497 MsG0280010927.01.T01:intron 50.0%
!! GAGGAAGGGAGTATCACACT+TGG + Chr2:77077739-77077758 None:intergenic 50.0%
!! GGGAGTATCACACTTGGTCT+TGG + Chr2:77077733-77077752 None:intergenic 50.0%
AGCAGCCACAATCACGGTTG+TGG - Chr2:77077250-77077269 MsG0280010927.01.T01:intron 55.0%
ATCGGTCCAGGCGATTTCTG+TGG - Chr2:77077679-77077698 MsG0280010927.01.T01:intron 55.0%
CCTCCACTCTTCTAGGCGAA+CGG + Chr2:77076931-77076950 None:intergenic 55.0%
CGTTCGCCTAGAAGAGTGGA+GGG - Chr2:77076929-77076948 MsG0280010927.01.T01:intron 55.0%
CTCTCTCCAACCGACCAGTT+TGG - Chr2:77072971-77072990 MsG0280010927.01.T01:CDS 55.0%
CTGCGTTAGATACGCTGCCA+TGG + Chr2:77072846-77072865 None:intergenic 55.0%
GGCTGAAGCAGCCACAATCA+CGG - Chr2:77077244-77077263 MsG0280010927.01.T01:intron 55.0%
GGTGGGGATTAAGGAACCTG+AGG - Chr2:77076318-77076337 MsG0280010927.01.T01:intron 55.0%
TGAGCCATGGGAACATGAGC+TGG - Chr2:77072771-77072790 MsG0280010927.01.T01:CDS 55.0%
TGCTGCATTGCCTCTTCCTC+AGG - Chr2:77075156-77075175 MsG0280010927.01.T01:intron 55.0%
! TGGTAACGCGCAAAGGCGAT+TGG + Chr2:77074375-77074394 None:intergenic 55.0%
!! GGGTGCAGTTCTTTGGGACA+AGG - Chr2:77076485-77076504 MsG0280010927.01.T01:intron 55.0%
CCGTTCGCCTAGAAGAGTGG+AGG - Chr2:77076928-77076947 MsG0280010927.01.T01:intron 60.0%
CGATCCGAGGAGGAAAGGAG+AGG + Chr2:77072875-77072894 None:intergenic 60.0%
CGGGATACCCGAATCCGTCA+AGG - Chr2:77072562-77072581 MsG0280010927.01.T01:CDS 60.0%
GGTGGCTACACGAGGAGTAG+AGG - Chr2:77077043-77077062 MsG0280010927.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 77072550 77078152 77072550 ID=MsG0280010927.01;Name=MsG0280010927.01
Chr2 mRNA 77072550 77078152 77072550 ID=MsG0280010927.01.T01;Parent=MsG0280010927.01;Name=MsG0280010927.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0|0|1|1|1|5|0|396
Chr2 exon 77078084 77078152 77078084 ID=MsG0280010927.01.T01:exon:11381;Parent=MsG0280010927.01.T01
Chr2 exon 77075525 77075674 77075525 ID=MsG0280010927.01.T01:exon:11380;Parent=MsG0280010927.01.T01
Chr2 exon 77074967 77075032 77074967 ID=MsG0280010927.01.T01:exon:11379;Parent=MsG0280010927.01.T01
Chr2 exon 77073557 77073793 77073557 ID=MsG0280010927.01.T01:exon:11378;Parent=MsG0280010927.01.T01
Chr2 exon 77072550 77073218 77072550 ID=MsG0280010927.01.T01:exon:11377;Parent=MsG0280010927.01.T01
Chr2 CDS 77078084 77078152 77078084 ID=MsG0280010927.01.T01:cds;Parent=MsG0280010927.01.T01
Chr2 CDS 77075525 77075674 77075525 ID=MsG0280010927.01.T01:cds;Parent=MsG0280010927.01.T01
Chr2 CDS 77074967 77075032 77074967 ID=MsG0280010927.01.T01:cds;Parent=MsG0280010927.01.T01
Chr2 CDS 77073557 77073793 77073557 ID=MsG0280010927.01.T01:cds;Parent=MsG0280010927.01.T01
Chr2 CDS 77072550 77073218 77072550 ID=MsG0280010927.01.T01:cds;Parent=MsG0280010927.01.T01
Gene Sequence

>MsG0280010927.01.T01

ATGAGCATGAGACGGGATACCCGAATCCGTCAAGGTTATGGATGTGATTTGATTTCTCATCCACGTTGGATTTGTATGAAGTTTCGTACTGCTTATGTTGCTCCTTCTTCCAAGGTTTTTGGTAGAGGAGAACTTGTTCTTACCTATTCTAAGATCGCTCTTAGGTACTTCAGCAAGGGTTTTTGGTTAGACTCTATTGCTGCATTGCCTCTTCCTCAGGGGTTGTTACAGAACAGCATGGCAGGTGCTGCTTACAACCTCATGCTTTACATGTTGGCCAGCCATACATACCTTCAATCGATAACCGTTCGCCTAGAAGAGTGGAGGGTGAAAAGAACTGACACAGAACAATGGATGCATCACAGACAACTACCTCCAGAACTACGAGAGTCTATTCGTAAATATAATCAATATAAATGGGTGGCTACACGAGGAGTAGAGGAAGAAGATCTTCTCAAAGGACTTCCGCTGGATCTTAGGAGAGAAATCAAACGCCACCTTTGTCTTGAACTAGTTCGAGGAGTTCCCTTGTTTGACCAAATGGATGAAAGAATGCTAGACGCAATATGCGAAAGACTAAAGCCTGCATTATGCACTGAGGGAACTTATCTTGTTCGCGAAGGCGATCCAGTGAACGAAATGCTCTTCATAATTAGAGGCCATCTTGATTCATACACAACAAATGGAGGCCGTGACGGATTCTTCAACTCATGTAGAATCGGTCCAGGCGATTTCTGTGGTGAAGAGCTCTTAACATGGGCCTTAGATCCAAGACCAAGTGTGATACTCCCTTCCTCAACAAGAACAGTTAAAGCTTTCTCAGAAGTAGAAGCCTTTGCACTCATAGCTGAAGATCTTAAGTTTGTTGCATCTCAATTTAGAAGACTACATAGTAAACAACTTAGGCATAAATTCAGATTTTATTCACACCAATGGAGAACTTGGGCTGCTTGTTTTATTCAAGCTGCATGGAGAAGGCACAAGAAAAGGAAAGAAGCTGCTGAATTGAGGGCTAAGGAGAATCTTGTGGCAGCTTCAGAGGCTGAAAATGAAATAGCAAAAAAATATGGGAAAGGTTTTGTTGTTTATGGAACAAGGGTTGCAAGGAATACTAGGAAAGGTGTTAATATGCATTCTGGGGTAGTAAGCTCTTTGCAGAAACCAACAGAACCTGATTTTTCTGATGAATAA
Protein sequence

>MsG0280010927.01.T01

MSMRRDTRIRQGYGCDLISHPRWICMKFRTAYVAPSSKVFGRGELVLTYSKIALRYFSKGFWLDSIAALPLPQGLLQNSMAGAAYNLMLYMLASHTYLQSITVRLEEWRVKRTDTEQWMHHRQLPPELRESIRKYNQYKWVATRGVEEEDLLKGLPLDLRREIKRHLCLELVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRDGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAFSEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKEAAELRAKENLVAASEAENEIAKKYGKGFVVYGTRVARNTRKGVNMHSGVVSSLQKPTEPDFSDE*