AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011095.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011095.01.T01 MTR_2g098630 97.721 351 3 1 1 351 17 362 0.0 704
MsG0280011095.01.T01 MTR_2g098630 97.721 351 3 1 1 351 1 346 0.0 703
MsG0280011095.01.T01 MTR_2g098630 99.533 214 1 0 138 351 43 256 3.97e-158 443
MsG0280011095.01.T01 MTR_7g008030 34.365 323 143 8 37 351 50 311 2.21e-50 171
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011095.01.T01 AT2G43320 66.667 354 112 5 1 351 1 351 4.76e-170 477
MsG0280011095.01.T01 AT2G43320 66.667 354 112 5 1 351 1 351 4.76e-170 477
MsG0280011095.01.T01 AT4G14000 33.438 320 137 7 38 351 41 290 1.13e-47 163

Find 104 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTGAAACTATCCTTTC+TGG 0.104312 2:+79525112 MsG0280011095.01.T01:three_prime_UTR
ATGGAACTGGACCAGGATTT+TGG 0.176468 2:-79522771 None:intergenic
GAAACTATCCTTTCTGGATT+TGG 0.210372 2:+79525118 MsG0280011095.01.T01:three_prime_UTR
TTCAAAGAGTTAACAGAGTA+TGG 0.230271 2:-79524075 None:intergenic
GAAATCGAACAAGCATTATT+AGG 0.319123 2:-79519942 None:intergenic
ATTGGAATTGTAAATCAAAA+TGG 0.337142 2:+79525082 MsG0280011095.01.T01:three_prime_UTR
TTGGATAAGAAACTCAATAT+TGG 0.338601 2:+79525064 MsG0280011095.01.T01:three_prime_UTR
ATTCAGAGAGAGTTAGGTTT+TGG 0.338623 2:-79520225 None:intergenic
ACCTAACTCTCTCTGAATTC+AGG 0.349207 2:+79520230 MsG0280011095.01.T01:five_prime_UTR
AAGAGCTAATGAGGCAGATC+AGG 0.351711 2:+79524014 MsG0280011095.01.T01:CDS
ACCTGAATTCAGAGAGAGTT+AGG 0.362655 2:-79520231 None:intergenic
AGTGCATTTGGTTAAGGATT+TGG 0.364694 2:+79524787 MsG0280011095.01.T01:CDS
GTGCAGCTCAGTTGCAACTA+TGG 0.367887 2:+79523084 MsG0280011095.01.T01:intron
TGGAATCTTTGCTTGCTTGA+AGG 0.385742 2:+79523113 MsG0280011095.01.T01:CDS
TGCTGAAACGTACCTTAAAA+TGG 0.388735 2:-79521716 None:intergenic
AAGCATTGTGAAAGTATTGC+CGG 0.390945 2:-79521382 None:intergenic
GTAAGCGTTGCTGATATCAT+AGG 0.392075 2:+79522309 MsG0280011095.01.T01:CDS
CCAACATAGTGCTTCTTAGT+TGG 0.393791 2:-79524707 None:intergenic
TTCTTATAGCTTAGTAATAA+CGG 0.393972 2:+79524961 MsG0280011095.01.T01:three_prime_UTR
AGTTGCAACTATGGACTTCC+TGG 0.402863 2:+79523093 MsG0280011095.01.T01:CDS
GAGAAGCTCAAACTCATTCC+AGG 0.407503 2:-79523886 None:intergenic
ATTTGGCTGACAGAGATATC+TGG 0.407805 2:+79524804 MsG0280011095.01.T01:CDS
AGCCAAGATGGTAGCATCAT+TGG 0.412480 2:+79523937 MsG0280011095.01.T01:CDS
TTGTTGAACAATTGTATTGT+GGG 0.412700 2:-79520036 None:intergenic
AATGGTAGTTGTACCTTTGA+AGG 0.422490 2:-79521499 None:intergenic
TGCGAGATGAATAGCTTTCT+CGG 0.424105 2:-79521455 None:intergenic
GAGTCTGCCTTGAAGGAGTA+AGG 0.430875 2:-79523774 None:intergenic
GGCCTAGTGCCTCGCGATCA+TGG 0.432544 2:+79521409 MsG0280011095.01.T01:CDS
GCAAGATATACTACTCCATA+TGG 0.440913 2:-79524683 None:intergenic
GGTGCAAGAGTCTGCCTTGA+AGG 0.442524 2:-79523781 None:intergenic
TTCAAGCAAGCAAAGATTCC+AGG 0.447556 2:-79523111 None:intergenic
ACTGACAAGATCGATGGAAC+TGG 0.456884 2:-79522784 None:intergenic
ATACTTTCACAATGCTTGCC+TGG 0.461266 2:+79521388 MsG0280011095.01.T01:CDS
AGTCTCCCCTTACTCCTTCA+AGG 0.467899 2:+79523767 MsG0280011095.01.T01:CDS
GTTTATCTTATCAGTTCGAC+AGG 0.468980 2:+79521325 MsG0280011095.01.T01:intron
TTTCACACTGACAAGGAAGC+TGG 0.471457 2:+79521681 MsG0280011095.01.T01:CDS
TGATCGCGAGGCACTAGGCC+AGG 0.473160 2:-79521406 None:intergenic
TCGATCTTGTCAGTGTTCTC+AGG 0.478533 2:+79522793 MsG0280011095.01.T01:CDS
CACTATGTTGGCTTTAGCAA+TGG 0.487530 2:+79524719 MsG0280011095.01.T01:CDS
GTAAGAGAATATCTAGTTGT+GGG 0.488324 2:-79519776 None:intergenic
ATCTCAAGCAAGCTCGTGAT+AGG 0.490045 2:+79523728 MsG0280011095.01.T01:CDS
GCTGTATGCTCTCATTAAGA+AGG 0.490565 2:+79524101 MsG0280011095.01.T01:CDS
GTCCAATGATGCTACCATCT+TGG 0.492533 2:-79523939 None:intergenic
TACAATTGTTCAACAACAGA+AGG 0.492592 2:+79520043 MsG0280011095.01.T01:five_prime_UTR
AATCTAGTTCAAGAAGGTCT+AGG 0.505401 2:+79523965 MsG0280011095.01.T01:CDS
GTTGCTGATATCATAGGGTT+CGG 0.512763 2:+79522315 MsG0280011095.01.T01:CDS
TTGAGATTACCAAGGACATT+CGG 0.513103 2:-79523712 None:intergenic
AGCATTGTGAAAGTATTGCC+GGG 0.518150 2:-79521381 None:intergenic
GATGGATATGAAGCGACACC+TGG 0.521604 2:+79523868 MsG0280011095.01.T01:CDS
GTTGTTGAACAATTGTATTG+TGG 0.521827 2:-79520037 None:intergenic
TTCACACTGACAAGGAAGCT+GGG 0.523575 2:+79521682 MsG0280011095.01.T01:CDS
CAGTGTATAAGGCCTCCATA+TGG 0.523925 2:+79524668 MsG0280011095.01.T01:intron
ATCAACTGCAATGCGTGCCC+CGG 0.524425 2:+79521363 MsG0280011095.01.T01:exon
AGAGACAATATCCTCAAGAC+TGG 0.526398 2:+79522344 MsG0280011095.01.T01:CDS
AACTCTCAGGAAGTCGAGCA+TGG 0.526851 2:+79523989 MsG0280011095.01.T01:CDS
AAGATCGATGGAACTGGACC+AGG 0.529297 2:-79522778 None:intergenic
GAAGGAAGAATCTCCACTGC+TGG 0.530773 2:-79521481 None:intergenic
TTGTAGGCTATCCAAAATCC+TGG 0.531728 2:+79522760 MsG0280011095.01.T01:intron
GAAGGAGTAAGGGGAGACTC+TGG 0.536647 2:-79523763 None:intergenic
AGTGGAGATTCTTCCTTCAA+AGG 0.538231 2:+79521486 MsG0280011095.01.T01:CDS
ACAAGAATTCAAAGATCAGA+TGG 0.539641 2:+79524845 MsG0280011095.01.T01:three_prime_UTR
GCGAGATGAATAGCTTTCTC+GGG 0.546042 2:-79521454 None:intergenic
AGTCTGCCTTGAAGGAGTAA+GGG 0.548303 2:-79523773 None:intergenic
ACAACTGTACCGAATGTCCT+TGG 0.550768 2:+79523703 MsG0280011095.01.T01:CDS
AGAAGGTCTAGGAAACTCTC+AGG 0.551273 2:+79523976 MsG0280011095.01.T01:CDS
GTCTGCCTTGAAGGAGTAAG+GGG 0.556078 2:-79523772 None:intergenic
CTCAGGAATGAGATTCGTGA+TGG 0.559089 2:+79522810 MsG0280011095.01.T01:CDS
TGTAAGAGAATATCTAGTTG+TGG 0.566370 2:-79519777 None:intergenic
GATGGGCAATTGACCTTCAG+AGG 0.568466 2:+79522828 MsG0280011095.01.T01:CDS
AGAAGAAGCTTCGACGTCAG+AGG 0.570067 2:-79520088 None:intergenic
GATGTAGGTAGTAGCCAAGA+TGG 0.572612 2:+79523925 MsG0280011095.01.T01:CDS
AGAGCTAATGAGGCAGATCA+GGG 0.576077 2:+79524015 MsG0280011095.01.T01:CDS
TAAGCGTTGCTGATATCATA+GGG 0.576434 2:+79522310 MsG0280011095.01.T01:CDS
CCAACTAAGAAGCACTATGT+TGG 0.576670 2:+79524707 MsG0280011095.01.T01:CDS
AGCATGGGAAAGAGCTAATG+AGG 0.580629 2:+79524005 MsG0280011095.01.T01:CDS
TTCCATGATCGCGAGGCACT+AGG 0.581410 2:-79521411 None:intergenic
ACTCTCAGGAAGTCGAGCAT+GGG 0.581643 2:+79523990 MsG0280011095.01.T01:CDS
GAGAAATGTGTTAGATGAGG+AGG 0.584734 2:+79524754 MsG0280011095.01.T01:CDS
TCATCTCGCATCACCAGCAG+TGG 0.589124 2:+79521468 MsG0280011095.01.T01:CDS
TAGAAGATCCAAATCCAGAA+AGG 0.589141 2:-79525126 None:intergenic
ACAATATCCTCAAGACTGGA+TGG 0.597780 2:+79522348 MsG0280011095.01.T01:CDS
AACATAACAAGATCTATGTA+CGG 0.601233 2:-79519905 None:intergenic
AGCTAATGAGGCAGATCAGG+GGG 0.601274 2:+79524017 MsG0280011095.01.T01:CDS
GACACGAATCTAGTTCAAGA+AGG 0.606715 2:+79523959 MsG0280011095.01.T01:CDS
GAGAACACTGACAAGATCGA+TGG 0.620581 2:-79522790 None:intergenic
TTCACAGTAGACAACACGCT+AGG 0.621926 2:-79523841 None:intergenic
GTACATACCATCCAGTCTTG+AGG 0.628458 2:-79522355 None:intergenic
GCTGATATCATAGGGTTCGG+TGG 0.633196 2:+79522318 MsG0280011095.01.T01:CDS
GCTGAGAAATGTGTTAGATG+AGG 0.637065 2:+79524751 MsG0280011095.01.T01:CDS
AGAAATGTGTTAGATGAGGA+GGG 0.641023 2:+79524755 MsG0280011095.01.T01:CDS
TCAGGAATGAGATTCGTGAT+GGG 0.642794 2:+79522811 MsG0280011095.01.T01:CDS
CTGATCTTGAAAATGCACAA+TGG 0.646401 2:-79523659 None:intergenic
CCAGCATAAAAGTTAACAGA+CGG 0.654796 2:-79523802 None:intergenic
ACAATTGTTCAACAACAGAA+GGG 0.655156 2:+79520044 MsG0280011095.01.T01:five_prime_UTR
CTGAGACTTCCATGATCGCG+AGG 0.660220 2:-79521418 None:intergenic
AATGAGTTTGAGCTTCTCTG+AGG 0.665222 2:+79523891 MsG0280011095.01.T01:CDS
TCACACTGACAAGGAAGCTG+GGG 0.671691 2:+79521683 MsG0280011095.01.T01:CDS
TCAGTGCAAAGCAATCTCAT+CGG 0.682317 2:+79525019 MsG0280011095.01.T01:three_prime_UTR
AGATATACTACTCCATATGG+AGG 0.684240 2:-79524680 None:intergenic
GCAGGCGTTTCACACTGACA+AGG 0.685156 2:+79521674 MsG0280011095.01.T01:intron
GAGCTAATGAGGCAGATCAG+GGG 0.688813 2:+79524016 MsG0280011095.01.T01:CDS
TTATAGCTTAGTAATAACGG+AGG 0.695621 2:+79524964 MsG0280011095.01.T01:three_prime_UTR
GCATTGTGAAAGTATTGCCG+GGG 0.703393 2:-79521380 None:intergenic
GAGCTTGCTTGAGATTACCA+AGG 0.706867 2:-79523720 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTCTTTAATTAAATTATTTA+TGG + Chr2:79521793-79521812 MsG0280011095.01.T01:intron 10.0%
!!! AATTTTTTTTTTAAGTCTTT+TGG + Chr2:79523519-79523538 MsG0280011095.01.T01:intron 10.0%
!!! ATATATTGTTATTGAAAATA+GGG + Chr2:79520919-79520938 MsG0280011095.01.T01:intron 10.0%
!!! CTTTTTTAGAAAAAAAAATT+TGG + Chr2:79520516-79520535 MsG0280011095.01.T01:intron 10.0%
!!! TATATATTGTTATTGAAAAT+AGG + Chr2:79520918-79520937 MsG0280011095.01.T01:intron 10.0%
!! ACTAAAAAGATTGAAAAATA+TGG - Chr2:79523019-79523038 None:intergenic 15.0%
!! ATTTATTGTATTCAATTAGA+CGG + Chr2:79524395-79524414 MsG0280011095.01.T01:intron 15.0%
!! TCTAATTGAATACAATAAAT+TGG - Chr2:79524395-79524414 None:intergenic 15.0%
!! TGTTAAAAAATAATTGCAAT+TGG + Chr2:79520639-79520658 MsG0280011095.01.T01:intron 15.0%
!! TTCTATGATCATATATAATT+AGG + Chr2:79520320-79520339 MsG0280011095.01.T01:intron 15.0%
!!! AAAACAAAAAGATCAAATTT+TGG - Chr2:79520447-79520466 None:intergenic 15.0%
!!! AAACAAAAAGATCAAATTTT+GGG - Chr2:79520446-79520465 None:intergenic 15.0%
!!! ATATAGTGTTATTGAAAATA+GGG + Chr2:79520858-79520877 MsG0280011095.01.T01:intron 15.0%
!!! ATTTTATATTATTTTGCCAA+AGG + Chr2:79522038-79522057 MsG0280011095.01.T01:intron 15.0%
!!! TATATAGTGTTATTGAAAAT+AGG + Chr2:79520857-79520876 MsG0280011095.01.T01:intron 15.0%
!!! TTTTTGTTTTTTTCACTATT+AGG + Chr2:79520457-79520476 MsG0280011095.01.T01:intron 15.0%
!! AAAAAGAATCCAAAATCTTT+AGG - Chr2:79523454-79523473 None:intergenic 20.0%
!! ATCGTACTATTAATTATTCT+CGG - Chr2:79520969-79520988 None:intergenic 20.0%
!! ATTGGAATTGTAAATCAAAA+TGG + Chr2:79525082-79525101 MsG0280011095.01.T01:three_prime_UTR 20.0%
!! GAATAAAAACAATGGTTAAT+TGG + Chr2:79523544-79523563 MsG0280011095.01.T01:intron 20.0%
!! TTACTAAGCTATAAGAAAAA+TGG - Chr2:79524958-79524977 None:intergenic 20.0%
!! TTCTTATAGCTTAGTAATAA+CGG + Chr2:79524961-79524980 MsG0280011095.01.T01:three_prime_UTR 20.0%
!! TTGAATACAATAAATTGGTA+TGG - Chr2:79524390-79524409 None:intergenic 20.0%
!! TTTAAAAACGTTTATAGTGT+GGG + Chr2:79519864-79519883 MsG0280011095.01.T01:five_prime_UTR 20.0%
!!! AAAGATTTTGGATTCTTTTT+TGG + Chr2:79523454-79523473 MsG0280011095.01.T01:intron 20.0%
!!! AACAAAAAGATCAAATTTTG+GGG - Chr2:79520445-79520464 None:intergenic 20.0%
!!! ACATTGAATTATTGAACTTT+TGG - Chr2:79521938-79521957 None:intergenic 20.0%
!!! ATTATTTTTCTGACACAAAT+TGG - Chr2:79522616-79522635 None:intergenic 20.0%
!!! CATTGAATTATTGAACTTTT+GGG - Chr2:79521937-79521956 None:intergenic 20.0%
!!! TAAAAACAAATACTTCCTTT+TGG + Chr2:79521003-79521022 MsG0280011095.01.T01:intron 20.0%
!!! TAATAAATAGCGAAGTTTTT+AGG + Chr2:79521128-79521147 MsG0280011095.01.T01:intron 20.0%
!!! TTTTAAAAACGTTTATAGTG+TGG + Chr2:79519863-79519882 MsG0280011095.01.T01:five_prime_UTR 20.0%
!!! TTTTGGTAGAATAAAAACAA+TGG + Chr2:79523536-79523555 MsG0280011095.01.T01:intron 20.0%
! AAAAACTTTATTGGCATGAA+AGG + Chr2:79522522-79522541 MsG0280011095.01.T01:intron 25.0%
! AAAATTGAAACTATCCTTTC+TGG + Chr2:79525112-79525131 MsG0280011095.01.T01:three_prime_UTR 25.0%
! AAACACAATGAAATTCATCA+AGG + Chr2:79524445-79524464 MsG0280011095.01.T01:intron 25.0%
! AACATAACAAGATCTATGTA+CGG - Chr2:79519908-79519927 None:intergenic 25.0%
! AACTCAAATAAATTGACAAG+AGG - Chr2:79524574-79524593 None:intergenic 25.0%
! AGATTGAAAAATATGGATCA+AGG - Chr2:79523012-79523031 None:intergenic 25.0%
! ATACCTAGCAAAAACTTTAT+TGG + Chr2:79522513-79522532 MsG0280011095.01.T01:intron 25.0%
! ATACTAGCCAAATTAAAGAA+TGG - Chr2:79521872-79521891 None:intergenic 25.0%
! CATTTGTAAATGAGAAAAAG+AGG - Chr2:79522942-79522961 None:intergenic 25.0%
! CCTTATACACTGTTATAAAA+GGG - Chr2:79524660-79524679 None:intergenic 25.0%
! CTGATCCATATCAATAAAAT+GGG + Chr2:79521995-79522014 MsG0280011095.01.T01:intron 25.0%
! GATTGAAAAATATGGATCAA+GGG - Chr2:79523011-79523030 None:intergenic 25.0%
! GGTTATTAAATGTCACTATT+AGG + Chr2:79520940-79520959 MsG0280011095.01.T01:intron 25.0%
! GTAAAGTAAAGAATCGTATT+CGG - Chr2:79522081-79522100 None:intergenic 25.0%
! TACCTTGAAAGTTGAAATTA+AGG + Chr2:79521576-79521595 MsG0280011095.01.T01:intron 25.0%
! TATTGTTGAATCAATGATAG+TGG + Chr2:79521827-79521846 MsG0280011095.01.T01:intron 25.0%
! TGAAATAAAGAACCATTTAG+AGG - Chr2:79523629-79523648 None:intergenic 25.0%
! TTGGATAAGAAACTCAATAT+TGG + Chr2:79525064-79525083 MsG0280011095.01.T01:three_prime_UTR 25.0%
! TTGGTTTCCATTCTTTAATT+TGG + Chr2:79521862-79521881 MsG0280011095.01.T01:intron 25.0%
! TTGTTGAACAATTGTATTGT+GGG - Chr2:79520039-79520058 None:intergenic 25.0%
!! AAATGGTTCTTTATTTCACA+GGG + Chr2:79523631-79523650 MsG0280011095.01.T01:intron 25.0%
!! AAGGTTTGTTTCATTATACT+TGG + Chr2:79524120-79524139 MsG0280011095.01.T01:intron 25.0%
!! ACATTCTTATTCCTATTTTC+TGG + Chr2:79524631-79524650 MsG0280011095.01.T01:intron 25.0%
!! ATTTTATTGATATGGATCAG+GGG - Chr2:79521995-79522014 None:intergenic 25.0%
!! CAATGTAATAGTGTTGAAAT+TGG + Chr2:79523314-79523333 MsG0280011095.01.T01:intron 25.0%
!! CATAGTAATTGTTTTCTGAA+GGG + Chr2:79521749-79521768 MsG0280011095.01.T01:intron 25.0%
!! CATTTTATTGATATGGATCA+GGG - Chr2:79521996-79522015 None:intergenic 25.0%
!! TAAATGGTTCTTTATTTCAC+AGG + Chr2:79523630-79523649 MsG0280011095.01.T01:intron 25.0%
!! TCATAGTAATTGTTTTCTGA+AGG + Chr2:79521748-79521767 MsG0280011095.01.T01:intron 25.0%
!! TTAATTTGGCTAGTATCAAT+CGG + Chr2:79521876-79521895 MsG0280011095.01.T01:intron 25.0%
!!! AGAAAGTTTTCAAGAAAATG+AGG - Chr2:79522174-79522193 None:intergenic 25.0%
!!! ATTTTTGCTGTTGATTGTTT+AGG - Chr2:79521549-79521568 None:intergenic 25.0%
!!! CGCAGTTAATTTTTAGTTAT+AGG - Chr2:79521912-79521931 None:intergenic 25.0%
!!! GATGTTTTATTTTATGTGCA+TGG + Chr2:79520562-79520581 MsG0280011095.01.T01:intron 25.0%
!!! TAATATAGCATTGACCTTAA+GGG - Chr2:79522558-79522577 None:intergenic 25.0%
!!! TTAATATAGCATTGACCTTA+AGG - Chr2:79522559-79522578 None:intergenic 25.0%
!!! TTTTTGCTGTTGATTGTTTA+GGG - Chr2:79521548-79521567 None:intergenic 25.0%
!!! TTTTTTCCTCATCAATACAA+AGG + Chr2:79522705-79522724 MsG0280011095.01.T01:intron 25.0%
AACTTCGCTATTTATTACGA+AGG - Chr2:79521125-79521144 None:intergenic 30.0%
AAGAAAAGAGAGAAATCTTG+TGG - Chr2:79522986-79523005 None:intergenic 30.0%
AATACCGACCAAATCATTAT+CGG + Chr2:79521049-79521068 MsG0280011095.01.T01:intron 30.0%
AATATTCTCTGTCCTCTAAA+TGG + Chr2:79523614-79523633 MsG0280011095.01.T01:intron 30.0%
ACAAGAATTCAAAGATCAGA+TGG + Chr2:79524845-79524864 MsG0280011095.01.T01:three_prime_UTR 30.0%
ACAATTGTTCAACAACAGAA+GGG + Chr2:79520044-79520063 MsG0280011095.01.T01:five_prime_UTR 30.0%
AGAATCCAAAATCTTTAGGT+TGG - Chr2:79523450-79523469 None:intergenic 30.0%
AGTAAAATTCACACGAGAAA+AGG - Chr2:79520346-79520365 None:intergenic 30.0%
ATATCAATAAAATGGGATGC+AGG + Chr2:79522002-79522021 MsG0280011095.01.T01:intron 30.0%
CAAATAGAACAATGTCTTCT+TGG + Chr2:79523419-79523438 MsG0280011095.01.T01:intron 30.0%
CCTGATCCATATCAATAAAA+TGG + Chr2:79521994-79522013 MsG0280011095.01.T01:intron 30.0%
GAAATCGAACAAGCATTATT+AGG - Chr2:79519945-79519964 None:intergenic 30.0%
GAATTAAAACGACCAAATCA+AGG - Chr2:79522905-79522924 None:intergenic 30.0%
GCCTTATACACTGTTATAAA+AGG - Chr2:79524661-79524680 None:intergenic 30.0%
GTTGTTGAACAATTGTATTG+TGG - Chr2:79520040-79520059 None:intergenic 30.0%
TAAAAGGGAAACCAGAAAAT+AGG - Chr2:79524645-79524664 None:intergenic 30.0%
TAAACTGTTAGACAAATGGT+TGG + Chr2:79524196-79524215 MsG0280011095.01.T01:intron 30.0%
TACAATTGTTCAACAACAGA+AGG + Chr2:79520043-79520062 MsG0280011095.01.T01:five_prime_UTR 30.0%
TACATGATATTTCAGTCTGT+AGG + Chr2:79522375-79522394 MsG0280011095.01.T01:intron 30.0%
TATACTAAACTGCATATCTG+TGG + Chr2:79524171-79524190 MsG0280011095.01.T01:intron 30.0%
TCAAAGAAACATTCACTCAT+TGG + Chr2:79523588-79523607 MsG0280011095.01.T01:intron 30.0%
TCAGATACAACAAATCAACA+TGG + Chr2:79524338-79524357 MsG0280011095.01.T01:intron 30.0%
TCATGATCATGTATTCAACA+TGG - Chr2:79521165-79521184 None:intergenic 30.0%
TGCCTTAATTTCAACTTTCA+AGG - Chr2:79521581-79521600 None:intergenic 30.0%
TTATAGCTTAGTAATAACGG+AGG + Chr2:79524964-79524983 MsG0280011095.01.T01:three_prime_UTR 30.0%
TTCAAAGAGTTAACAGAGTA+TGG - Chr2:79524078-79524097 None:intergenic 30.0%
TTGTCTACTGTGAAAAATGA+TGG + Chr2:79523850-79523869 MsG0280011095.01.T01:CDS 30.0%
TTTATTGGCATGAAAGGAAA+AGG + Chr2:79522528-79522547 MsG0280011095.01.T01:intron 30.0%
! AACATTCATCTTGTTTGTGT+AGG + Chr2:79523228-79523247 MsG0280011095.01.T01:intron 30.0%
! ACATTTTTCCCAAAGAGAAA+AGG + Chr2:79519988-79520007 MsG0280011095.01.T01:five_prime_UTR 30.0%
! AGCATTATTAGGACTCTTTT+TGG - Chr2:79519934-79519953 None:intergenic 30.0%
! ATGCCAATAAAGTTTTTGCT+AGG - Chr2:79522519-79522538 None:intergenic 30.0%
! CAGTTAGTTTAATAGTTGAG+CGG + Chr2:79522251-79522270 MsG0280011095.01.T01:intron 30.0%
! CATTATTAGGACTCTTTTTG+GGG - Chr2:79519932-79519951 None:intergenic 30.0%
! CCATTTTATTGATATGGATC+AGG - Chr2:79521997-79522016 None:intergenic 30.0%
! CCCTTTTATAACAGTGTATA+AGG + Chr2:79524657-79524676 MsG0280011095.01.T01:intron 30.0%
! CTTTTTGTCCTTTTCTCTTT+GGG - Chr2:79519999-79520018 None:intergenic 30.0%
! GCATTATTAGGACTCTTTTT+GGG - Chr2:79519933-79519952 None:intergenic 30.0%
! GGAAAATACTGACCATTTTA+AGG + Chr2:79521704-79521723 MsG0280011095.01.T01:CDS 30.0%
! TAAGTGTAAAGTTTGATAGC+TGG + Chr2:79521262-79521281 MsG0280011095.01.T01:intron 30.0%
! TGCATCCCATTTTATTGATA+TGG - Chr2:79522003-79522022 None:intergenic 30.0%
!! ATAATGATTTGGTCGGTATT+TGG - Chr2:79521049-79521068 None:intergenic 30.0%
!!! TGAATTTTTTGCCCACTTTT+GGG + Chr2:79521607-79521626 MsG0280011095.01.T01:intron 30.0%
!!! TTGAATTTTTTGCCCACTTT+TGG + Chr2:79521606-79521625 MsG0280011095.01.T01:intron 30.0%
!!! TTTTGCTGTTGATTGTTTAG+GGG - Chr2:79521547-79521566 None:intergenic 30.0%
AAAGCAACCCGATAATGATT+TGG - Chr2:79521060-79521079 None:intergenic 35.0%
AAGAGGAAACTTATGCAATC+AGG - Chr2:79524557-79524576 None:intergenic 35.0%
AAGGTATACAGTTGCACTTT+AGG + Chr2:79523132-79523151 MsG0280011095.01.T01:intron 35.0%
AATGGTAGTTGTACCTTTGA+AGG - Chr2:79521502-79521521 None:intergenic 35.0%
AGAAATGTGTTAGATGAGGA+GGG + Chr2:79524755-79524774 MsG0280011095.01.T01:CDS 35.0%
AGATATACTACTCCATATGG+AGG - Chr2:79524683-79524702 None:intergenic 35.0%
AGTGCATTTGGTTAAGGATT+TGG + Chr2:79524787-79524806 MsG0280011095.01.T01:CDS 35.0%
ATACCGACCAAATCATTATC+GGG + Chr2:79521050-79521069 MsG0280011095.01.T01:intron 35.0%
ATATCATGCGAGTTAATGGT+TGG + Chr2:79521198-79521217 MsG0280011095.01.T01:intron 35.0%
ATGCAATACTCATTGTAGTG+TGG - Chr2:79524522-79524541 None:intergenic 35.0%
CCAGCATAAAAGTTAACAGA+CGG - Chr2:79523805-79523824 None:intergenic 35.0%
CTGATCTTGAAAATGCACAA+TGG - Chr2:79523662-79523681 None:intergenic 35.0%
CTTGCTTTAATGCCTTGATT+TGG + Chr2:79522890-79522909 MsG0280011095.01.T01:intron 35.0%
GAAACTATCCTTTCTGGATT+TGG + Chr2:79525118-79525137 MsG0280011095.01.T01:three_prime_UTR 35.0%
GAATGTTTCTTTGAACGTCT+GGG - Chr2:79523582-79523601 None:intergenic 35.0%
GACAATATCATGCGAGTTAA+TGG + Chr2:79521194-79521213 MsG0280011095.01.T01:intron 35.0%
GCAAGATATACTACTCCATA+TGG - Chr2:79524686-79524705 None:intergenic 35.0%
GGAGAGAAATAGTAGTTCAT+AGG - Chr2:79522422-79522441 None:intergenic 35.0%
GGCATAAACTGTTAGACAAA+TGG + Chr2:79524192-79524211 MsG0280011095.01.T01:intron 35.0%
GTTTATCTTATCAGTTCGAC+AGG + Chr2:79521325-79521344 MsG0280011095.01.T01:intron 35.0%
TATGTTTGCATAGTAATGCC+TGG - Chr2:79522443-79522462 None:intergenic 35.0%
TGAATGTTTCTTTGAACGTC+TGG - Chr2:79523583-79523602 None:intergenic 35.0%
TGATCAACTAACACTTGAAC+TGG + Chr2:79520696-79520715 MsG0280011095.01.T01:intron 35.0%
TGATCTATCTGTGACTTTGT+AGG + Chr2:79522744-79522763 MsG0280011095.01.T01:intron 35.0%
TGCAATACTCATTGTAGTGT+GGG - Chr2:79524521-79524540 None:intergenic 35.0%
TGCTGAAACGTACCTTAAAA+TGG - Chr2:79521719-79521738 None:intergenic 35.0%
TTATATATGTCATGCTCTGC+AGG + Chr2:79521656-79521675 MsG0280011095.01.T01:intron 35.0%
TTCCTCATCAATACAAAGGA+GGG + Chr2:79522709-79522728 MsG0280011095.01.T01:intron 35.0%
TTGAGATTACCAAGGACATT+CGG - Chr2:79523715-79523734 None:intergenic 35.0%
TTGCTAGGTATCATAGCATA+CGG - Chr2:79522504-79522523 None:intergenic 35.0%
TTTCCTCATCAATACAAAGG+AGG + Chr2:79522708-79522727 MsG0280011095.01.T01:intron 35.0%
! AAGTACTCTTTTTCCTCTGA+AGG - Chr2:79522844-79522863 None:intergenic 35.0%
! AATCTAGTTCAAGAAGGTCT+AGG + Chr2:79523965-79523984 MsG0280011095.01.T01:CDS 35.0%
! ACAAATGGTTGGTTGTAGTT+TGG + Chr2:79524207-79524226 MsG0280011095.01.T01:intron 35.0%
! AGATTTGGTAATCATGCCTT+TGG - Chr2:79522057-79522076 None:intergenic 35.0%
! ATGAACTACTATTTCTCTCC+AGG + Chr2:79522422-79522441 MsG0280011095.01.T01:intron 35.0%
! ATTCAGAGAGAGTTAGGTTT+TGG - Chr2:79520228-79520247 None:intergenic 35.0%
! CAAATGGTTGGTTGTAGTTT+GGG + Chr2:79524208-79524227 MsG0280011095.01.T01:intron 35.0%
! CACTACAATGAGTATTGCAT+CGG + Chr2:79524522-79524541 MsG0280011095.01.T01:intron 35.0%
! CGTCTGTTAACTTTTATGCT+GGG + Chr2:79523803-79523822 MsG0280011095.01.T01:CDS 35.0%
! CTTTGTGTGTATTTGATAGC+TGG + Chr2:79523195-79523214 MsG0280011095.01.T01:intron 35.0%
! GAGAAAAGGACAAAAAGCAT+TGG + Chr2:79520002-79520021 MsG0280011095.01.T01:five_prime_UTR 35.0%
! GATCTATGTACGGATCTTTT+AGG - Chr2:79519898-79519917 None:intergenic 35.0%
! GCTTTTTGTCCTTTTCTCTT+TGG - Chr2:79520000-79520019 None:intergenic 35.0%
! GTAGATTTTCAGACGAAGTA+AGG + Chr2:79524474-79524493 MsG0280011095.01.T01:intron 35.0%
! GTCTGTTAACTTTTATGCTG+GGG + Chr2:79523804-79523823 MsG0280011095.01.T01:CDS 35.0%
! GTTTTGCATACTCATATCGT+TGG + Chr2:79525045-79525064 MsG0280011095.01.T01:three_prime_UTR 35.0%
! TAACTTTTATGCTGGGGATT+GGG + Chr2:79523810-79523829 MsG0280011095.01.T01:CDS 35.0%
! TAAGCGTTGCTGATATCATA+GGG + Chr2:79522310-79522329 MsG0280011095.01.T01:CDS 35.0%
! TCATTGTGTTTTGTATGCCA+TGG - Chr2:79524436-79524455 None:intergenic 35.0%
! TTAACTTTTATGCTGGGGAT+TGG + Chr2:79523809-79523828 MsG0280011095.01.T01:CDS 35.0%
!! AAGCATTGTGAAAGTATTGC+CGG - Chr2:79521385-79521404 None:intergenic 35.0%
!! AATGATAGTGGAAGGATTTC+AGG + Chr2:79521839-79521858 MsG0280011095.01.T01:intron 35.0%
!! AGTAATTGTTTTCTGAAGGG+TGG + Chr2:79521752-79521771 MsG0280011095.01.T01:intron 35.0%
!! ATCCAAAATCTTTAGGTTGG+TGG - Chr2:79523447-79523466 None:intergenic 35.0%
!! GTTGAATCAATGATAGTGGA+AGG + Chr2:79521831-79521850 MsG0280011095.01.T01:intron 35.0%
!!! TTTTAAGGTACGTTTCAGCA+TGG + Chr2:79521719-79521738 MsG0280011095.01.T01:CDS 35.0%
!!! TTTTGGAGTGCATTTGGTTA+AGG + Chr2:79524781-79524800 MsG0280011095.01.T01:CDS 35.0%
AAGGAAAAGGACAACCCTTA+AGG + Chr2:79522541-79522560 MsG0280011095.01.T01:intron 40.0%
AATACTCATTGTAGTGTGGG+TGG - Chr2:79524518-79524537 None:intergenic 40.0%
AATGAGTTTGAGCTTCTCTG+AGG + Chr2:79523891-79523910 MsG0280011095.01.T01:CDS 40.0%
AATGTGAGATGTCATGCAGT+TGG + Chr2:79521953-79521972 MsG0280011095.01.T01:intron 40.0%
ACAATATCCTCAAGACTGGA+TGG + Chr2:79522348-79522367 MsG0280011095.01.T01:CDS 40.0%
ACCTAACTCTCTCTGAATTC+AGG + Chr2:79520230-79520249 MsG0280011095.01.T01:five_prime_UTR 40.0%
ACCTGAATTCAGAGAGAGTT+AGG - Chr2:79520234-79520253 None:intergenic 40.0%
AGAATCGTATTCGGCAGATT+TGG - Chr2:79522072-79522091 None:intergenic 40.0%
AGAGACAATATCCTCAAGAC+TGG + Chr2:79522344-79522363 MsG0280011095.01.T01:CDS 40.0%
AGTGGAGATTCTTCCTTCAA+AGG + Chr2:79521486-79521505 MsG0280011095.01.T01:CDS 40.0%
ATACTTTCACAATGCTTGCC+TGG + Chr2:79521388-79521407 MsG0280011095.01.T01:CDS 40.0%
ATTTGGCTGACAGAGATATC+TGG + Chr2:79524804-79524823 MsG0280011095.01.T01:CDS 40.0%
CAAAGTAGTGACAATGACCA+AGG - Chr2:79523180-79523199 None:intergenic 40.0%
CCAACATAGTGCTTCTTAGT+TGG - Chr2:79524710-79524729 None:intergenic 40.0%
CTTTACGTTTCTGCAGAATC+TGG + Chr2:79522095-79522114 MsG0280011095.01.T01:intron 40.0%
GAGAAATGTGTTAGATGAGG+AGG + Chr2:79524754-79524773 MsG0280011095.01.T01:CDS 40.0%
GATGACATGACAATACGTAG+AGG - Chr2:79524320-79524339 None:intergenic 40.0%
GCTGAGAAATGTGTTAGATG+AGG + Chr2:79524751-79524770 MsG0280011095.01.T01:CDS 40.0%
GCTGTATGCTCTCATTAAGA+AGG + Chr2:79524101-79524120 MsG0280011095.01.T01:CDS 40.0%
GTTGCTGATATCATAGGGTT+CGG + Chr2:79522315-79522334 MsG0280011095.01.T01:CDS 40.0%
TAGTGACAATGACCAAGGAA+AGG - Chr2:79523175-79523194 None:intergenic 40.0%
TCACCGTCTAAGTATGCAAT+CGG + Chr2:79524361-79524380 MsG0280011095.01.T01:intron 40.0%
TCAGGAATGAGATTCGTGAT+GGG + Chr2:79522811-79522830 MsG0280011095.01.T01:CDS 40.0%
TCAGTGCAAAGCAATCTCAT+CGG + Chr2:79525019-79525038 MsG0280011095.01.T01:three_prime_UTR 40.0%
TCCTCATCAATACAAAGGAG+GGG + Chr2:79522710-79522729 MsG0280011095.01.T01:intron 40.0%
TCTTTGAACGTCTGGGAAAA+AGG - Chr2:79523575-79523594 None:intergenic 40.0%
TGCGAGATGAATAGCTTTCT+CGG - Chr2:79521458-79521477 None:intergenic 40.0%
TGGAATCTTTGCTTGCTTGA+AGG + Chr2:79523113-79523132 MsG0280011095.01.T01:CDS 40.0%
TTCAAGCAAGCAAAGATTCC+AGG - Chr2:79523114-79523133 None:intergenic 40.0%
TTCATGGACGATTGTCCAAA+AGG - Chr2:79521021-79521040 None:intergenic 40.0%
TTGTAGGCTATCCAAAATCC+TGG + Chr2:79522760-79522779 MsG0280011095.01.T01:intron 40.0%
! ATAGTGGAAGGATTTCAGGT+TGG + Chr2:79521843-79521862 MsG0280011095.01.T01:intron 40.0%
! CATCTTGTTTGTGTAGGTGT+TGG + Chr2:79523234-79523253 MsG0280011095.01.T01:intron 40.0%
! CCGTCTGTTAACTTTTATGC+TGG + Chr2:79523802-79523821 MsG0280011095.01.T01:CDS 40.0%
! CTTGGGAAGGCATAAAAAGA+AGG - Chr2:79523363-79523382 None:intergenic 40.0%
! GACACGAATCTAGTTCAAGA+AGG + Chr2:79523959-79523978 MsG0280011095.01.T01:CDS 40.0%
! GAGGAAGACTTTTTGGATGT+AGG + Chr2:79523910-79523929 MsG0280011095.01.T01:CDS 40.0%
! GGCAATAAGTTGAAACACCA+TGG + Chr2:79524416-79524435 MsG0280011095.01.T01:intron 40.0%
! GTAAGCGTTGCTGATATCAT+AGG + Chr2:79522309-79522328 MsG0280011095.01.T01:CDS 40.0%
! TACAATGAGTATTGCATCGG+TGG + Chr2:79524525-79524544 MsG0280011095.01.T01:intron 40.0%
! TCACCGATTGCATACTTAGA+CGG - Chr2:79524367-79524386 None:intergenic 40.0%
! TGCCACCAACCTAAAGATTT+TGG + Chr2:79523442-79523461 MsG0280011095.01.T01:intron 40.0%
!! AGCATTGTGAAAGTATTGCC+GGG - Chr2:79521384-79521403 None:intergenic 40.0%
!! CAACCCGATAATGATTTGGT+CGG - Chr2:79521056-79521075 None:intergenic 40.0%
!! CACAAATTGGCTTTGTAGGT+TGG - Chr2:79522603-79522622 None:intergenic 40.0%
!! CACTATGTTGGCTTTAGCAA+TGG + Chr2:79524719-79524738 MsG0280011095.01.T01:CDS 40.0%
!! CAGAGGAAAAAGAGTACTTG+AGG + Chr2:79522845-79522864 MsG0280011095.01.T01:CDS 40.0%
!! CCAACTAAGAAGCACTATGT+TGG + Chr2:79524707-79524726 MsG0280011095.01.T01:CDS 40.0%
!! CTGACACAAATTGGCTTTGT+AGG - Chr2:79522607-79522626 None:intergenic 40.0%
!! CTTCTCTGAGGAAGACTTTT+TGG + Chr2:79523903-79523922 MsG0280011095.01.T01:CDS 40.0%
!!! TTAGATGAGGAGGGCATTTT+TGG + Chr2:79524764-79524783 MsG0280011095.01.T01:CDS 40.0%
AAGAGCTAATGAGGCAGATC+AGG + Chr2:79524014-79524033 MsG0280011095.01.T01:CDS 45.0%
AAGTTGGATGGAACTTGGGA+AGG - Chr2:79523376-79523395 None:intergenic 45.0%
ACAACTGTACCGAATGTCCT+TGG + Chr2:79523703-79523722 MsG0280011095.01.T01:CDS 45.0%
ACTGACAAGATCGATGGAAC+TGG - Chr2:79522787-79522806 None:intergenic 45.0%
AGAAGGTCTAGGAAACTCTC+AGG + Chr2:79523976-79523995 MsG0280011095.01.T01:CDS 45.0%
AGAGCTAATGAGGCAGATCA+GGG + Chr2:79524015-79524034 MsG0280011095.01.T01:CDS 45.0%
AGCATGGGAAAGAGCTAATG+AGG + Chr2:79524005-79524024 MsG0280011095.01.T01:CDS 45.0%
AGCCAAGATGGTAGCATCAT+TGG + Chr2:79523937-79523956 MsG0280011095.01.T01:CDS 45.0%
AGTTGCAACTATGGACTTCC+TGG + Chr2:79523093-79523112 MsG0280011095.01.T01:CDS 45.0%
ATAGTTGCAACTGAGCTGCA+CGG - Chr2:79523085-79523104 None:intergenic 45.0%
ATCTCAAGCAAGCTCGTGAT+AGG + Chr2:79523728-79523747 MsG0280011095.01.T01:CDS 45.0%
CAACGCTTACTATTCCCTGT+AGG - Chr2:79522299-79522318 None:intergenic 45.0%
CAGTGTATAAGGCCTCCATA+TGG + Chr2:79524668-79524687 MsG0280011095.01.T01:intron 45.0%
CCTGTCTTAAACCTCCTACA+GGG + Chr2:79522282-79522301 MsG0280011095.01.T01:intron 45.0%
CTCAGGAATGAGATTCGTGA+TGG + Chr2:79522810-79522829 MsG0280011095.01.T01:CDS 45.0%
GAATCGCAAGAATCAACACG+CGG - Chr2:79521091-79521110 None:intergenic 45.0%
GAGAACACTGACAAGATCGA+TGG - Chr2:79522793-79522812 None:intergenic 45.0%
GAGAAGCTCAAACTCATTCC+AGG - Chr2:79523889-79523908 None:intergenic 45.0%
GATGTAGGTAGTAGCCAAGA+TGG + Chr2:79523925-79523944 MsG0280011095.01.T01:CDS 45.0%
GCGAGATGAATAGCTTTCTC+GGG - Chr2:79521457-79521476 None:intergenic 45.0%
GTACATACCATCCAGTCTTG+AGG - Chr2:79522358-79522377 None:intergenic 45.0%
GTCCAATGATGCTACCATCT+TGG - Chr2:79523942-79523961 None:intergenic 45.0%
GTGCTCATTTCTCCTTTCCT+TGG + Chr2:79523160-79523179 MsG0280011095.01.T01:intron 45.0%
TCCTGTCTTAAACCTCCTAC+AGG + Chr2:79522281-79522300 MsG0280011095.01.T01:intron 45.0%
TCGATCTTGTCAGTGTTCTC+AGG + Chr2:79522793-79522812 MsG0280011095.01.T01:CDS 45.0%
TCGGTATTTGGCGACATTCA+TGG - Chr2:79521037-79521056 None:intergenic 45.0%
TGAAGGGTGGCATAATCAGA+TGG + Chr2:79521765-79521784 MsG0280011095.01.T01:intron 45.0%
TGCAGTTGGCAAACAACTAC+AGG + Chr2:79521967-79521986 MsG0280011095.01.T01:intron 45.0%
TTCACACTGACAAGGAAGCT+GGG + Chr2:79521682-79521701 MsG0280011095.01.T01:CDS 45.0%
TTCACAGTAGACAACACGCT+AGG - Chr2:79523844-79523863 None:intergenic 45.0%
TTTCACACTGACAAGGAAGC+TGG + Chr2:79521681-79521700 MsG0280011095.01.T01:CDS 45.0%
! AAGGTGAAAGCACAGTGCAT+TGG - Chr2:79523344-79523363 None:intergenic 45.0%
! ATGGAACTGGACCAGGATTT+TGG - Chr2:79522774-79522793 None:intergenic 45.0%
! ATGGTTGGTTGTAGTTTGGG+CGG + Chr2:79524211-79524230 MsG0280011095.01.T01:intron 45.0%
! CGACAAGTTGGATGGAACTT+GGG - Chr2:79523380-79523399 None:intergenic 45.0%
! GAGCTTGCTTGAGATTACCA+AGG - Chr2:79523723-79523742 None:intergenic 45.0%
! TCACTGCGTTTTGTATGCCA+TGG + Chr2:79524292-79524311 MsG0280011095.01.T01:intron 45.0%
!! ATTGTTTAGGGGTGTCTCGA+TGG - Chr2:79521536-79521555 None:intergenic 45.0%
!! GCATTGTGAAAGTATTGCCG+GGG - Chr2:79521383-79521402 None:intergenic 45.0%
!! TCGATGGCGGAAGATGAAAA+TGG - Chr2:79521520-79521539 None:intergenic 45.0%
!!! GGGCATTTTTGGAGTGCATT+TGG + Chr2:79524775-79524794 MsG0280011095.01.T01:CDS 45.0%
!! ATAAATAAAAAACAAAAATA+AGG - Chr2:79520286-79520305 None:intergenic 5.0%
!! CAAAATAATATAAAATATAA+AGG - Chr2:79522034-79522053 None:intergenic 5.0%
!!! ATTTATCTATTATATTTTAT+AGG - Chr2:79519809-79519828 None:intergenic 5.0%
!!! TTTATCTATTATATTTTATA+GGG - Chr2:79519808-79519827 None:intergenic 5.0%
AACTCTCAGGAAGTCGAGCA+TGG + Chr2:79523989-79524008 MsG0280011095.01.T01:CDS 50.0%
AAGATCGATGGAACTGGACC+AGG - Chr2:79522781-79522800 None:intergenic 50.0%
ACTCTCAGGAAGTCGAGCAT+GGG + Chr2:79523990-79524009 MsG0280011095.01.T01:CDS 50.0%
AGAAGAAGCTTCGACGTCAG+AGG - Chr2:79520091-79520110 None:intergenic 50.0%
AGCTAATGAGGCAGATCAGG+GGG + Chr2:79524017-79524036 MsG0280011095.01.T01:CDS 50.0%
CGCTTACTATTCCCTGTAGG+AGG - Chr2:79522296-79522315 None:intergenic 50.0%
CTTTCGTCAACGCGACAAGT+TGG - Chr2:79523392-79523411 None:intergenic 50.0%
GAAGGAAGAATCTCCACTGC+TGG - Chr2:79521484-79521503 None:intergenic 50.0%
GAGCTAATGAGGCAGATCAG+GGG + Chr2:79524016-79524035 MsG0280011095.01.T01:CDS 50.0%
GATGGATATGAAGCGACACC+TGG + Chr2:79523868-79523887 MsG0280011095.01.T01:CDS 50.0%
GATGGGCAATTGACCTTCAG+AGG + Chr2:79522828-79522847 MsG0280011095.01.T01:CDS 50.0%
GCTGATATCATAGGGTTCGG+TGG + Chr2:79522318-79522337 MsG0280011095.01.T01:CDS 50.0%
GTGCAGCTCAGTTGCAACTA+TGG + Chr2:79523084-79523103 MsG0280011095.01.T01:intron 50.0%
TCACACTGACAAGGAAGCTG+GGG + Chr2:79521683-79521702 MsG0280011095.01.T01:CDS 50.0%
! CCCTGTAGGAGGTTTAAGAC+AGG - Chr2:79522285-79522304 None:intergenic 50.0%
! GCCCCTCCTTTGTATTGATG+AGG - Chr2:79522714-79522733 None:intergenic 50.0%
! GCGACAAGTTGGATGGAACT+TGG - Chr2:79523381-79523400 None:intergenic 50.0%
!! GACAATACGTAGAGGCACCA+TGG - Chr2:79524312-79524331 None:intergenic 50.0%
!! TTGCCCACTTTTGGGTGACT+GGG + Chr2:79521615-79521634 MsG0280011095.01.T01:intron 50.0%
!! TTTGCCCACTTTTGGGTGAC+TGG + Chr2:79521614-79521633 MsG0280011095.01.T01:intron 50.0%
AATGAGGCAGATCAGGGGGA+TGG + Chr2:79524021-79524040 MsG0280011095.01.T01:CDS 55.0%
ATCAACTGCAATGCGTGCCC+CGG + Chr2:79521363-79521382 MsG0280011095.01.T01:exon 55.0%
CTGAGACTTCCATGATCGCG+AGG - Chr2:79521421-79521440 None:intergenic 55.0%
GCAGGCGTTTCACACTGACA+AGG + Chr2:79521674-79521693 MsG0280011095.01.T01:intron 55.0%
GGTGCAAGAGTCTGCCTTGA+AGG - Chr2:79523784-79523803 None:intergenic 55.0%
TCATCTCGCATCACCAGCAG+TGG + Chr2:79521468-79521487 MsG0280011095.01.T01:CDS 55.0%
TCCCCCAGTCACCCAAAAGT+GGG - Chr2:79521621-79521640 None:intergenic 55.0%
TTCCCCCAGTCACCCAAAAG+TGG - Chr2:79521622-79521641 None:intergenic 55.0%
! CGTCAACGCGACAAGTTGGA+TGG - Chr2:79523388-79523407 None:intergenic 55.0%
! TTCCATGATCGCGAGGCACT+AGG - Chr2:79521414-79521433 None:intergenic 55.0%
!! GTTTAGGGGTGTCTCGATGG+CGG - Chr2:79521533-79521552 None:intergenic 55.0%
!! TGCCCACTTTTGGGTGACTG+GGG + Chr2:79521616-79521635 MsG0280011095.01.T01:intron 55.0%
!! GCCCACTTTTGGGTGACTGG+GGG + Chr2:79521617-79521636 MsG0280011095.01.T01:intron 60.0%
GAGGCAGATCAGGGGGATGG+TGG + Chr2:79524024-79524043 MsG0280011095.01.T01:CDS 65.0%
GGCCTAGTGCCTCGCGATCA+TGG + Chr2:79521409-79521428 MsG0280011095.01.T01:CDS 65.0%
! TGATCGCGAGGCACTAGGCC+AGG - Chr2:79521409-79521428 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 79519779 79525147 79519779 ID=MsG0280011095.01;Name=MsG0280011095.01
Chr2 mRNA 79519779 79525147 79519779 ID=MsG0280011095.01.T01;Parent=MsG0280011095.01;Name=MsG0280011095.01.T01;_AED=0.44;_eAED=0.44;_QI=507|0.85|0.87|1|0.57|0.75|8|303|351
Chr2 exon 79519779 79520251 79519779 ID=MsG0280011095.01.T01:exon:10000;Parent=MsG0280011095.01.T01
Chr2 exon 79521339 79521507 79521339 ID=MsG0280011095.01.T01:exon:10001;Parent=MsG0280011095.01.T01
Chr2 exon 79521678 79521740 79521678 ID=MsG0280011095.01.T01:exon:10002;Parent=MsG0280011095.01.T01
Chr2 exon 79522303 79522369 79522303 ID=MsG0280011095.01.T01:exon:10003;Parent=MsG0280011095.01.T01
Chr2 exon 79522766 79522866 79522766 ID=MsG0280011095.01.T01:exon:10004;Parent=MsG0280011095.01.T01
Chr2 exon 79523090 79523134 79523090 ID=MsG0280011095.01.T01:exon:10005;Parent=MsG0280011095.01.T01
Chr2 exon 79523652 79524122 79523652 ID=MsG0280011095.01.T01:exon:10006;Parent=MsG0280011095.01.T01
Chr2 exon 79524671 79525147 79524671 ID=MsG0280011095.01.T01:exon:10007;Parent=MsG0280011095.01.T01
Chr2 five_prime_UTR 79519779 79520251 79519779 ID=MsG0280011095.01.T01:five_prime_utr;Parent=MsG0280011095.01.T01
Chr2 five_prime_UTR 79521339 79521372 79521339 ID=MsG0280011095.01.T01:five_prime_utr;Parent=MsG0280011095.01.T01
Chr2 CDS 79521373 79521507 79521373 ID=MsG0280011095.01.T01:cds;Parent=MsG0280011095.01.T01
Chr2 CDS 79521678 79521740 79521678 ID=MsG0280011095.01.T01:cds;Parent=MsG0280011095.01.T01
Chr2 CDS 79522303 79522369 79522303 ID=MsG0280011095.01.T01:cds;Parent=MsG0280011095.01.T01
Chr2 CDS 79522766 79522866 79522766 ID=MsG0280011095.01.T01:cds;Parent=MsG0280011095.01.T01
Chr2 CDS 79523090 79523134 79523090 ID=MsG0280011095.01.T01:cds;Parent=MsG0280011095.01.T01
Chr2 CDS 79523652 79524122 79523652 ID=MsG0280011095.01.T01:cds;Parent=MsG0280011095.01.T01
Chr2 CDS 79524671 79524844 79524671 ID=MsG0280011095.01.T01:cds;Parent=MsG0280011095.01.T01
Chr2 three_prime_UTR 79524845 79525147 79524845 ID=MsG0280011095.01.T01:three_prime_utr;Parent=MsG0280011095.01.T01
Gene Sequence

>MsG0280011095.01.T01

ATGCGTGCCCCGGCAATACTTTCACAATGCTTGCCTGGCCTAGTGCCTCGCGATCATGGAAGTCTCAGTATATCGTCTGTTCCCGAGAAAGCTATTCATCTCGCATCACCAGCAGTGGAGATTCTTCCTTCAAAGGCGTTTCACACTGACAAGGAAGCTGGGGAAAATACTGACCATTTTAAGGTACGTTTCAGCATGGGAATAGTAAGCGTTGCTGATATCATAGGGTTCGGTGGTTCAGAGACAATATCCTCAAGACTGGATGGCTATCCAAAATCCTGGTCCAGTTCCATCGATCTTGTCAGTGTTCTCAGGAATGAGATTCGTGATGGGCAATTGACCTTCAGAGGAAAAAGAGTACTTGAGCTCAGTTGCAACTATGGACTTCCTGGAATCTTTGCTTGCTTGAAGGGAGCTTCCATTGTGCATTTTCAAGATCAGAATGCTGAAACTGTAAGATGCACAACTGTACCGAATGTCCTTGGTAATCTCAAGCAAGCTCGTGATAGGCAGAGTCGACAGCCAGAGTCTCCCCTTACTCCTTCAAGGCAGACTCTTGCACCGTCTGTTAACTTTTATGCTGGGGATTGGGAAGAATTACCTAGCGTGTTGTCTACTGTGAAAAATGATGGATATGAAGCGACACCTGGAATGAGTTTGAGCTTCTCTGAGGAAGACTTTTTGGATGTAGGTAGTAGCCAAGATGGTAGCATCATTGGACACGAATCTAGTTCAAGAAGGTCTAGGAAACTCTCAGGAAGTCGAGCATGGGAAAGAGCTAATGAGGCAGATCAGGGGGATGGTGGCTATGATGTTATTTTAATGACTGAGATTCCATACTCTGTTAACTCTTTGAAGAAGCTGTATGCTCTCATTAAGAAGTGTATAAGGCCTCCATATGGAGTAGTATATCTTGCTCCAACTAAGAAGCACTATGTTGGCTTTAGCAATGGAGTAAGACAGCTGAGAAATGTGTTAGATGAGGAGGGCATTTTTGGAGTGCATTTGGTTAAGGATTTGGCTGACAGAGATATCTGGAAGTTGTTTCACAAGTGA
Protein sequence

>MsG0280011095.01.T01

MRAPAILSQCLPGLVPRDHGSLSISSVPEKAIHLASPAVEILPSKAFHTDKEAGENTDHFKVRFSMGIVSVADIIGFGGSETISSRLDGYPKSWSSSIDLVSVLRNEIRDGQLTFRGKRVLELSCNYGLPGIFACLKGASIVHFQDQNAETVRCTTVPNVLGNLKQARDRQSRQPESPLTPSRQTLAPSVNFYAGDWEELPSVLSTVKNDGYEATPGMSLSFSEEDFLDVGSSQDGSIIGHESSSRRSRKLSGSRAWERANEADQGDGGYDVILMTEIPYSVNSLKKLYALIKKCIRPPYGVVYLAPTKKHYVGFSNGVRQLRNVLDEEGIFGVHLVKDLADRDIWKLFHK*