Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041621.01.T01 | XP_003626394.1 | 95.475 | 442 | 14 | 3 | 1 | 437 | 1 | 441 | 0 | 859 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041621.01.T01 | F4K5T4 | 39.535 | 473 | 194 | 15 | 1 | 431 | 1 | 423 | 4.20E-86 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041621.01.T01 | G7L0U1 | 95.475 | 442 | 14 | 3 | 1 | 437 | 1 | 441 | 0.0 | 859 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0780041621.01.T01 | TF | GeBP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048897.01 | MsG0780041621.01 | 0.806614 | 7.551130e-50 | 4.116907e-47 |
| MsG0180000440.01 | MsG0780041621.01 | 0.809880 | 1.520371e-50 | 9.031719e-48 |
| MsG0180001297.01 | MsG0780041621.01 | 0.821962 | 3.054693e-53 | 2.522146e-50 |
| MsG0180004533.01 | MsG0780041621.01 | 0.802745 | 4.848785e-49 | 2.393886e-46 |
| MsG0180005873.01 | MsG0780041621.01 | 0.831135 | 1.982191e-55 | 2.131677e-52 |
| MsG0780040917.01 | MsG0780041621.01 | 0.848894 | 4.581134e-60 | 8.532620e-57 |
| MsG0780041621.01 | MsG0880042694.01 | 0.805812 | 1.114218e-49 | 5.951821e-47 |
| MsG0780041621.01 | MsG0880043482.01 | 0.808306 | 3.305111e-50 | 1.883240e-47 |
| MsG0780041621.01 | MsG0880045458.01 | 0.801118 | 1.047105e-48 | 4.960510e-46 |
| MsG0780041621.01 | MsG0880046832.01 | 0.842694 | 2.211570e-58 | 3.379987e-55 |
| MsG0780041621.01 | MsG0880047221.01 | 0.810024 | 1.416041e-50 | 8.443867e-48 |
| MsG0280011095.01 | MsG0780041621.01 | 0.842706 | 2.194597e-58 | 3.355337e-55 |
| MsG0380011693.01 | MsG0780041621.01 | -0.821937 | 3.096313e-53 | 2.554695e-50 |
| MsG0680033618.01 | MsG0780041621.01 | 0.822522 | 2.264249e-53 | 1.899829e-50 |
| MsG0480018496.01 | MsG0780041621.01 | 0.817860 | 2.648892e-52 | 1.951528e-49 |
| MsG0480018851.01 | MsG0780041621.01 | 0.832302 | 1.021492e-55 | 1.136985e-52 |
| MsG0480020400.01 | MsG0780041621.01 | 0.809098 | 2.238196e-50 | 1.302245e-47 |
| MsG0480023016.01 | MsG0780041621.01 | 0.812144 | 4.913602e-51 | 3.099565e-48 |
| MsG0480023518.01 | MsG0780041621.01 | 0.805879 | 1.078804e-49 | 5.772451e-47 |
| MsG0480023534.01 | MsG0780041621.01 | 0.805620 | 1.222279e-49 | 6.496801e-47 |
| MsG0380014937.01 | MsG0780041621.01 | 0.805423 | 1.344763e-49 | 7.111641e-47 |
| MsG0380015972.01 | MsG0780041621.01 | 0.814301 | 1.652192e-51 | 1.104541e-48 |
| MsG0380016588.01 | MsG0780041621.01 | 0.810720 | 1.001762e-50 | 6.084302e-48 |
| MsG0380016839.01 | MsG0780041621.01 | 0.809558 | 1.783608e-50 | 1.050542e-47 |
| MsG0380016993.01 | MsG0780041621.01 | 0.803426 | 3.505198e-49 | 1.760911e-46 |
| MsG0380017868.01 | MsG0780041621.01 | 0.843418 | 1.418513e-58 | 2.218123e-55 |
| MsG0580026095.01 | MsG0780041621.01 | 0.834087 | 3.671324e-56 | 4.310993e-53 |
| MsG0280008750.01 | MsG0780041621.01 | 0.800528 | 1.381558e-48 | 6.447500e-46 |
| MsG0280010521.01 | MsG0780041621.01 | 0.886669 | 2.796741e-72 | 2.016654e-68 |
| MsG0780035976.01 | MsG0780041621.01 | 0.816544 | 5.236623e-52 | 3.721164e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041621.01.T01 | MTR_7g114600 | 95.475 | 442 | 14 | 3 | 1 | 437 | 1 | 441 | 0.0 | 859 |
| MsG0780041621.01.T01 | MTR_1g081580 | 42.929 | 396 | 141 | 14 | 45 | 429 | 49 | 370 | 6.83e-77 | 244 |
| MsG0780041621.01.T01 | MTR_1g081560 | 50.000 | 106 | 45 | 3 | 103 | 203 | 127 | 229 | 9.23e-25 | 105 |
| MsG0780041621.01.T01 | MTR_1g081560 | 39.815 | 108 | 46 | 4 | 325 | 430 | 282 | 372 | 5.60e-13 | 70.5 |
| MsG0780041621.01.T01 | MTR_1g081570 | 52.874 | 87 | 26 | 1 | 114 | 200 | 28 | 99 | 1.06e-20 | 87.0 |
| MsG0780041621.01.T01 | MTR_3g070120 | 33.929 | 112 | 66 | 2 | 108 | 219 | 153 | 256 | 2.68e-14 | 74.3 |
| MsG0780041621.01.T01 | MTR_2g010790 | 34.615 | 104 | 58 | 2 | 102 | 205 | 198 | 291 | 8.39e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041621.01.T01 | AT5G28040 | 39.535 | 473 | 194 | 15 | 1 | 431 | 1 | 423 | 4.29e-87 | 272 |
| MsG0780041621.01.T01 | AT5G28040 | 39.535 | 473 | 194 | 15 | 1 | 431 | 1 | 423 | 4.29e-87 | 272 |
| MsG0780041621.01.T01 | AT3G04930 | 62.805 | 164 | 50 | 5 | 48 | 209 | 87 | 241 | 6.02e-59 | 198 |
| MsG0780041621.01.T01 | AT3G04930 | 62.805 | 164 | 50 | 5 | 48 | 209 | 87 | 241 | 4.53e-58 | 197 |
| MsG0780041621.01.T01 | AT3G04930 | 37.584 | 149 | 60 | 6 | 307 | 431 | 313 | 452 | 1.06e-15 | 79.3 |
| MsG0780041621.01.T01 | AT4G00390 | 34.911 | 169 | 84 | 5 | 35 | 202 | 104 | 247 | 1.15e-20 | 93.6 |
| MsG0780041621.01.T01 | AT1G61730 | 34.969 | 163 | 83 | 4 | 40 | 202 | 106 | 245 | 7.60e-20 | 91.3 |
| MsG0780041621.01.T01 | AT1G11510 | 39.535 | 129 | 71 | 3 | 80 | 204 | 106 | 231 | 9.39e-19 | 87.8 |
| MsG0780041621.01.T01 | AT1G11510 | 40.777 | 103 | 58 | 1 | 102 | 204 | 103 | 202 | 1.10e-18 | 87.0 |
| MsG0780041621.01.T01 | AT4G01260 | 36.957 | 184 | 91 | 8 | 56 | 217 | 51 | 231 | 1.75e-18 | 86.7 |
| MsG0780041621.01.T01 | AT4G25210 | 36.641 | 131 | 69 | 4 | 86 | 203 | 110 | 239 | 2.76e-17 | 83.6 |
| MsG0780041621.01.T01 | AT1G44810 | 36.066 | 122 | 68 | 2 | 93 | 210 | 107 | 222 | 1.04e-15 | 77.8 |
| MsG0780041621.01.T01 | AT2G01370 | 38.614 | 101 | 57 | 3 | 103 | 201 | 74 | 171 | 1.32e-14 | 73.9 |
| MsG0780041621.01.T01 | AT4G00610 | 32.520 | 123 | 71 | 3 | 82 | 201 | 120 | 233 | 4.85e-13 | 70.5 |
| MsG0780041621.01.T01 | AT2G25650 | 33.684 | 95 | 63 | 0 | 107 | 201 | 64 | 158 | 2.25e-11 | 65.5 |
| MsG0780041621.01.T01 | AT5G14280 | 30.526 | 95 | 66 | 0 | 110 | 204 | 63 | 157 | 8.30e-11 | 63.2 |
Find 90 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAGGAAGCAACAGATTT+TGG | 0.165742 | 7:-93165118 | MsG0780041621.01.T01:CDS |
| CCGTTTCAGACGATGAATTT+AGG | 0.215452 | 7:-93165171 | MsG0780041621.01.T01:CDS |
| GAGTTGTTTATCGCCGTTTA+AGG | 0.229902 | 7:-93165262 | MsG0780041621.01.T01:CDS |
| TCCGTCACCGTCGCCGTTCC+CGG | 0.291496 | 7:-93166149 | MsG0780041621.01.T01:CDS |
| CAGACGATGAATTTAGGTTT+TGG | 0.306437 | 7:-93165165 | MsG0780041621.01.T01:CDS |
| GTAGCATAAGCATTAGGATT+AGG | 0.338681 | 7:+93165432 | None:intergenic |
| TTGATCCAAACGTTGACGTT+TGG | 0.362708 | 7:+93166058 | None:intergenic |
| GCAGTTGTAGCATAAGCATT+AGG | 0.365701 | 7:+93165426 | None:intergenic |
| ACGGGAGTGAAATTGAGGTT+AGG | 0.366561 | 7:+93165636 | None:intergenic |
| GCAGCATTAGTATTAACATT+AGG | 0.376257 | 7:+93165366 | None:intergenic |
| CGATTCCAAACGTCAACGTT+TGG | 0.378466 | 7:-93166063 | MsG0780041621.01.T01:CDS |
| TGTATTTCTTCTTCAACCTT+CGG | 0.381493 | 7:+93165823 | None:intergenic |
| AGTAATAATTGTAGTACTGC+TGG | 0.385802 | 7:-93165321 | MsG0780041621.01.T01:CDS |
| TTGTGATTAGGATAGGGATT+AGG | 0.391090 | 7:+93165468 | None:intergenic |
| CAAACGTTGACGTTTGGAAT+CGG | 0.393384 | 7:+93166064 | None:intergenic |
| GGAAGTGTATTCAAAGAGAT+TGG | 0.394682 | 7:-93165091 | MsG0780041621.01.T01:CDS |
| ACATTAGGAGTAGTAATTGT+AGG | 0.395915 | 7:+93165381 | None:intergenic |
| CGGGAGTGAAATTGAGGTTA+GGG | 0.396355 | 7:+93165637 | None:intergenic |
| TTGAAATCTCTCGCAAGATC+TGG | 0.402112 | 7:-93165731 | MsG0780041621.01.T01:CDS |
| TGGAGGTCTGAGAGCTCCTC+CGG | 0.404026 | 7:+93166130 | None:intergenic |
| GCAATGGGAGGAGGACTGTT+TGG | 0.407072 | 7:-93165225 | MsG0780041621.01.T01:CDS |
| ATCGCCGTTTAAGGAATTGA+TGG | 0.410493 | 7:-93165253 | MsG0780041621.01.T01:CDS |
| TTGTGATTGTGATTGTGATT+AGG | 0.420049 | 7:+93165456 | None:intergenic |
| GTAATTGTAGGTGTTATTGC+AGG | 0.422477 | 7:+93165393 | None:intergenic |
| GTTGCGGTTGGTGTTAGAAT+TGG | 0.424821 | 7:+93166110 | None:intergenic |
| CCAGCCATCAATTCCTTAAA+CGG | 0.436526 | 7:+93165249 | None:intergenic |
| GAGAATTGGTGGATGAGAAA+TGG | 0.440436 | 7:-93165137 | MsG0780041621.01.T01:CDS |
| TTGAGGTTAGGGTTAGGACT+TGG | 0.440851 | 7:+93165648 | None:intergenic |
| GATGTCTTCTTCAGCGAAAA+CGG | 0.442070 | 7:+93166289 | None:intergenic |
| GTGAAATTGAGGTTAGGGTT+AGG | 0.470406 | 7:+93165642 | None:intergenic |
| GATGAATTGCGTTCAGTTGG+TGG | 0.477018 | 7:-93165036 | MsG0780041621.01.T01:CDS |
| GAATTGATGGCTGGTGCAAT+GGG | 0.477602 | 7:-93165240 | MsG0780041621.01.T01:CDS |
| GATAGGGATTAGGATTATTG+AGG | 0.478564 | 7:+93165478 | None:intergenic |
| CAACCACGCGGAAGCGTTCA+CGG | 0.479940 | 7:-93165590 | MsG0780041621.01.T01:CDS |
| GTCGTGTTGCTGTGAAGCCA+TGG | 0.481747 | 7:+93166313 | None:intergenic |
| GCGGTTGGTGTTAGAATTGG+AGG | 0.483246 | 7:+93166113 | None:intergenic |
| GTTGAAATCGAGTTGAAGCT+TGG | 0.492100 | 7:+93165869 | None:intergenic |
| CCTAAATTCATCGTCTGAAA+CGG | 0.495889 | 7:+93165171 | None:intergenic |
| TTCGGATCTTCTCAACGAGC+TGG | 0.497082 | 7:+93165841 | None:intergenic |
| GGCGAAGATGATCGTGGTTG+CGG | 0.497664 | 7:+93166094 | None:intergenic |
| CTCAAAGCTTCTGATAGAAA+CGG | 0.498357 | 7:+93165560 | None:intergenic |
| TCCGGGAACGGCGACGGTGA+CGG | 0.500148 | 7:+93166148 | None:intergenic |
| GAATTACGGGAGTGAAATTG+AGG | 0.501359 | 7:+93165631 | None:intergenic |
| AGCTCCTCCGGGAACGGCGA+CGG | 0.517162 | 7:+93166142 | None:intergenic |
| TCAACGTTTGGATCAAATTG+AGG | 0.517701 | 7:-93166051 | MsG0780041621.01.T01:CDS |
| GGCGACGGTGACGGAGGGAA+CGG | 0.527528 | 7:+93166157 | None:intergenic |
| ATAGTAACATCACCGGCGAT+TGG | 0.530842 | 7:+93165696 | None:intergenic |
| ACTGCTGGGAATGGTGTAGC+TGG | 0.532760 | 7:-93165306 | MsG0780041621.01.T01:CDS |
| CCGTTTAAGGAATTGATGGC+TGG | 0.533833 | 7:-93165249 | MsG0780041621.01.T01:CDS |
| ATGGCTGGTGCAATGGGAGG+AGG | 0.535572 | 7:-93165234 | MsG0780041621.01.T01:CDS |
| TCGTGTTGCTGTGAAGCCAT+GGG | 0.538176 | 7:+93166314 | None:intergenic |
| GAGCAAAATGAGCTCTGGTA+AGG | 0.538676 | 7:-93165790 | MsG0780041621.01.T01:CDS |
| CGTGAATCTTCAACCATAGG+TGG | 0.540544 | 7:+93166020 | None:intergenic |
| CTTGATGAATTGCGTTCAGT+TGG | 0.542946 | 7:-93165039 | MsG0780041621.01.T01:CDS |
| ACGTTTGGAATCGGTTGAGT+CGG | 0.547440 | 7:+93166073 | None:intergenic |
| GTTGTGAGCAAAATGAGCTC+TGG | 0.549041 | 7:-93165795 | MsG0780041621.01.T01:CDS |
| ATGGACCGACGAAGACGAGA+TGG | 0.549218 | 7:-93165979 | MsG0780041621.01.T01:CDS |
| GAGATAGAAGCAGAAGCAGA+TGG | 0.550480 | 7:+93166179 | None:intergenic |
| GGAATTGATGGCTGGTGCAA+TGG | 0.550630 | 7:-93165241 | MsG0780041621.01.T01:CDS |
| GTAATAATTGTAGTACTGCT+GGG | 0.552619 | 7:-93165320 | MsG0780041621.01.T01:CDS |
| ATTGTGATTGTGATTAGGAT+AGG | 0.560354 | 7:+93165461 | None:intergenic |
| TTGCGTGAATCTTCAACCAT+AGG | 0.563271 | 7:+93166017 | None:intergenic |
| CTTGCGAGAGATTTCAAACG+TGG | 0.563273 | 7:+93165737 | None:intergenic |
| GACGAGATGGAACTGTTACA+AGG | 0.568392 | 7:-93165966 | MsG0780041621.01.T01:CDS |
| TTGTGATTGTGATTAGGATA+GGG | 0.568508 | 7:+93165462 | None:intergenic |
| TCTGAGAGCTCCTCCGGGAA+CGG | 0.571875 | 7:+93166136 | None:intergenic |
| GGAACGGCGACGGTGACGGA+GGG | 0.575721 | 7:+93166152 | None:intergenic |
| CGAATACGAAGAAGAAGATG+AGG | 0.576730 | 7:-93166243 | MsG0780041621.01.T01:CDS |
| AACAACGTAGCGCCAATCGC+CGG | 0.577047 | 7:-93165708 | MsG0780041621.01.T01:CDS |
| GGAGGTCTGAGAGCTCCTCC+GGG | 0.580886 | 7:+93166131 | None:intergenic |
| GGAGGACTGTTTGGATCGCG+TGG | 0.584367 | 7:-93165216 | MsG0780041621.01.T01:CDS |
| AATTGGTGGATGAGAAATGG+AGG | 0.596698 | 7:-93165134 | MsG0780041621.01.T01:CDS |
| AAGATGATCGTGGTTGCGGT+TGG | 0.598224 | 7:+93166098 | None:intergenic |
| GGGAACGGCGACGGTGACGG+AGG | 0.599600 | 7:+93166151 | None:intergenic |
| CAGTTCCATCTCGTCTTCGT+CGG | 0.601304 | 7:+93165974 | None:intergenic |
| AATTGTAGTACTGCTGGGAA+TGG | 0.606803 | 7:-93165315 | MsG0780041621.01.T01:CDS |
| TTCATCGTCTGAAACGGTAG+CGG | 0.613739 | 7:+93165177 | None:intergenic |
| GTCGTCTATAGTAACATCAC+CGG | 0.620625 | 7:+93165689 | None:intergenic |
| TTGATGGCTGGTGCAATGGG+AGG | 0.622136 | 7:-93165237 | MsG0780041621.01.T01:CDS |
| CTCGATTACACAACACAGAG+AGG | 0.638279 | 7:-93165939 | MsG0780041621.01.T01:CDS |
| TCCCGTAATTCTCAAAAGCG+AGG | 0.641190 | 7:-93165619 | MsG0780041621.01.T01:CDS |
| AGCTCGTTGAGAAGATCCGA+AGG | 0.641486 | 7:-93165839 | MsG0780041621.01.T01:CDS |
| GATTTGATCGTAGAATTGAG+CGG | 0.644134 | 7:+93165896 | None:intergenic |
| CTTCTGATAGAAACGGATCG+AGG | 0.677211 | 7:+93165567 | None:intergenic |
| TGAGTCGGCGAAGATGATCG+TGG | 0.687674 | 7:+93166088 | None:intergenic |
| GAAGCGTGAATCAAATGATG+CGG | 0.695426 | 7:-93165538 | MsG0780041621.01.T01:CDS |
| GTCACCGTCGCCGTTCCCGG+AGG | 0.698715 | 7:-93166146 | MsG0780041621.01.T01:CDS |
| AGGCCGTGAACGCTTCCGCG+TGG | 0.708545 | 7:+93165587 | None:intergenic |
| GTGTGATTGAAGAGACAGTG+AGG | 0.762218 | 7:-93165284 | MsG0780041621.01.T01:CDS |
| GCGAGGTAAATTCAACCACG+CGG | 0.795949 | 7:-93165602 | MsG0780041621.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ACATTAGGAGTAGTAATTGT+AGG | + | Chr7:93165953-93165972 | None:intergenic | 30.0% | |
| AGTAATAATTGTAGTACTGC+TGG | - | Chr7:93166010-93166029 | MsG0780041621.01.T01:CDS | 30.0% | |
| ATTGTGATTGTGATTAGGAT+AGG | + | Chr7:93165873-93165892 | None:intergenic | 30.0% | |
| GCAGCATTAGTATTAACATT+AGG | + | Chr7:93165968-93165987 | None:intergenic | 30.0% | |
| GTAATAATTGTAGTACTGCT+GGG | - | Chr7:93166011-93166030 | MsG0780041621.01.T01:CDS | 30.0% | |
| TGTATTTCTTCTTCAACCTT+CGG | + | Chr7:93165511-93165530 | None:intergenic | 30.0% | |
| TTGTGATTGTGATTAGGATA+GGG | + | Chr7:93165872-93165891 | None:intergenic | 30.0% | |
| TTGTGATTGTGATTGTGATT+AGG | + | Chr7:93165878-93165897 | None:intergenic | 30.0% | |
| CCTAAATTCATCGTCTGAAA+CGG | + | Chr7:93166163-93166182 | None:intergenic | 35.0% | |
| CTCAAAGCTTCTGATAGAAA+CGG | + | Chr7:93165774-93165793 | None:intergenic | 35.0% | |
| GATAGGGATTAGGATTATTG+AGG | + | Chr7:93165856-93165875 | None:intergenic | 35.0% | |
| GATTTGATCGTAGAATTGAG+CGG | + | Chr7:93165438-93165457 | None:intergenic | 35.0% | |
| GTAGCATAAGCATTAGGATT+AGG | + | Chr7:93165902-93165921 | None:intergenic | 35.0% | |
| TCAACGTTTGGATCAAATTG+AGG | - | Chr7:93165280-93165299 | MsG0780041621.01.T01:CDS | 35.0% | |
| TTGTGATTAGGATAGGGATT+AGG | + | Chr7:93165866-93165885 | None:intergenic | 35.0% | |
| ! | GGAAGTGTATTCAAAGAGAT+TGG | - | Chr7:93166240-93166259 | MsG0780041621.01.T01:CDS | 35.0% |
| !! | ACGATGAATTTAGGTTTTGG+AGG | - | Chr7:93166169-93166188 | MsG0780041621.01.T01:CDS | 35.0% |
| !! | CAGACGATGAATTTAGGTTT+TGG | - | Chr7:93166166-93166185 | MsG0780041621.01.T01:CDS | 35.0% |
| !! | GTAATTGTAGGTGTTATTGC+AGG | + | Chr7:93165941-93165960 | None:intergenic | 35.0% |
| !! | TACCTCGCTTTTGAGAATTA+CGG | + | Chr7:93165717-93165736 | None:intergenic | 35.0% |
| !!! | ATGAATTTAGGTTTTGGAGG+TGG | - | Chr7:93166172-93166191 | MsG0780041621.01.T01:CDS | 35.0% |
| !!! | GAAGCAACAGATTTTGGAAT+TGG | - | Chr7:93166219-93166238 | MsG0780041621.01.T01:CDS | 35.0% |
| AATTGTAGTACTGCTGGGAA+TGG | - | Chr7:93166016-93166035 | MsG0780041621.01.T01:CDS | 40.0% | |
| ATCGCCGTTTAAGGAATTGA+TGG | - | Chr7:93166078-93166097 | MsG0780041621.01.T01:CDS | 40.0% | |
| CCAGCCATCAATTCCTTAAA+CGG | + | Chr7:93166085-93166104 | None:intergenic | 40.0% | |
| CCGTTTCAGACGATGAATTT+AGG | - | Chr7:93166160-93166179 | MsG0780041621.01.T01:CDS | 40.0% | |
| CGAATACGAAGAAGAAGATG+AGG | - | Chr7:93165088-93165107 | MsG0780041621.01.T01:CDS | 40.0% | |
| CTTGATGAATTGCGTTCAGT+TGG | - | Chr7:93166292-93166311 | MsG0780041621.01.T01:CDS | 40.0% | |
| GAAGCGTGAATCAAATGATG+CGG | - | Chr7:93165793-93165812 | MsG0780041621.01.T01:CDS | 40.0% | |
| GAATTACGGGAGTGAAATTG+AGG | + | Chr7:93165703-93165722 | None:intergenic | 40.0% | |
| GAGTTGTTTATCGCCGTTTA+AGG | - | Chr7:93166069-93166088 | MsG0780041621.01.T01:CDS | 40.0% | |
| GATGTCTTCTTCAGCGAAAA+CGG | + | Chr7:93165045-93165064 | None:intergenic | 40.0% | |
| GCAGTTGTAGCATAAGCATT+AGG | + | Chr7:93165908-93165927 | None:intergenic | 40.0% | |
| GTCGTCTATAGTAACATCAC+CGG | + | Chr7:93165645-93165664 | None:intergenic | 40.0% | |
| GTGAAATTGAGGTTAGGGTT+AGG | + | Chr7:93165692-93165711 | None:intergenic | 40.0% | |
| TGAGGAGAAAAAACCACCTA+TGG | - | Chr7:93165298-93165317 | MsG0780041621.01.T01:CDS | 40.0% | |
| TTGAAATCTCTCGCAAGATC+TGG | - | Chr7:93165600-93165619 | MsG0780041621.01.T01:CDS | 40.0% | |
| TTGATCCAAACGTTGACGTT+TGG | + | Chr7:93165276-93165295 | None:intergenic | 40.0% | |
| TTGCGTGAATCTTCAACCAT+AGG | + | Chr7:93165317-93165336 | None:intergenic | 40.0% | |
| ! | AATTGGTGGATGAGAAATGG+AGG | - | Chr7:93166197-93166216 | MsG0780041621.01.T01:CDS | 40.0% |
| ! | ATGGAGGAAGCAACAGATTT+TGG | - | Chr7:93166213-93166232 | MsG0780041621.01.T01:CDS | 40.0% |
| ! | CAAACGTTGACGTTTGGAAT+CGG | + | Chr7:93165270-93165289 | None:intergenic | 40.0% |
| ! | GAGAATTGGTGGATGAGAAA+TGG | - | Chr7:93166194-93166213 | MsG0780041621.01.T01:CDS | 40.0% |
| !! | ACCTCGCTTTTGAGAATTAC+GGG | + | Chr7:93165716-93165735 | None:intergenic | 40.0% |
| !! | GTTGAAATCGAGTTGAAGCT+TGG | + | Chr7:93165465-93165484 | None:intergenic | 40.0% |
| !!! | GCAAGCTTTTTCAACGTCTA+TGG | - | Chr7:93165333-93165352 | MsG0780041621.01.T01:CDS | 40.0% |
| ACGGGAGTGAAATTGAGGTT+AGG | + | Chr7:93165698-93165717 | None:intergenic | 45.0% | |
| ATAGTAACATCACCGGCGAT+TGG | + | Chr7:93165638-93165657 | None:intergenic | 45.0% | |
| CGATTCCAAACGTCAACGTT+TGG | - | Chr7:93165268-93165287 | MsG0780041621.01.T01:CDS | 45.0% | |
| CGGGAGTGAAATTGAGGTTA+GGG | + | Chr7:93165697-93165716 | None:intergenic | 45.0% | |
| CGTGAATCTTCAACCATAGG+TGG | + | Chr7:93165314-93165333 | None:intergenic | 45.0% | |
| CTCGATTACACAACACAGAG+AGG | - | Chr7:93165392-93165411 | MsG0780041621.01.T01:CDS | 45.0% | |
| CTTCTGATAGAAACGGATCG+AGG | + | Chr7:93165767-93165786 | None:intergenic | 45.0% | |
| CTTGCGAGAGATTTCAAACG+TGG | + | Chr7:93165597-93165616 | None:intergenic | 45.0% | |
| GACGAGATGGAACTGTTACA+AGG | - | Chr7:93165365-93165384 | MsG0780041621.01.T01:CDS | 45.0% | |
| GAGATAGAAGCAGAAGCAGA+TGG | + | Chr7:93165155-93165174 | None:intergenic | 45.0% | |
| GATGAATTGCGTTCAGTTGG+TGG | - | Chr7:93166295-93166314 | MsG0780041621.01.T01:CDS | 45.0% | |
| GTGTGATTGAAGAGACAGTG+AGG | - | Chr7:93166047-93166066 | MsG0780041621.01.T01:CDS | 45.0% | |
| GTTGTGAGCAAAATGAGCTC+TGG | - | Chr7:93165536-93165555 | MsG0780041621.01.T01:CDS | 45.0% | |
| TCCCGTAATTCTCAAAAGCG+AGG | - | Chr7:93165712-93165731 | MsG0780041621.01.T01:CDS | 45.0% | |
| TTGAGGTTAGGGTTAGGACT+TGG | + | Chr7:93165686-93165705 | None:intergenic | 45.0% | |
| ! | ACGTTTGGAATCGGTTGAGT+CGG | + | Chr7:93165261-93165280 | None:intergenic | 45.0% |
| ! | CCGTTTAAGGAATTGATGGC+TGG | - | Chr7:93166082-93166101 | MsG0780041621.01.T01:CDS | 45.0% |
| ! | GAATTGATGGCTGGTGCAAT+GGG | - | Chr7:93166091-93166110 | MsG0780041621.01.T01:CDS | 45.0% |
| ! | GAGCAAAATGAGCTCTGGTA+AGG | - | Chr7:93165541-93165560 | MsG0780041621.01.T01:CDS | 45.0% |
| ! | TTCATCGTCTGAAACGGTAG+CGG | + | Chr7:93166157-93166176 | None:intergenic | 45.0% |
| !! | GTTGCGGTTGGTGTTAGAAT+TGG | + | Chr7:93165224-93165243 | None:intergenic | 45.0% |
| !! | TTTTGGAGGTGGAGAATTGG+TGG | - | Chr7:93166183-93166202 | MsG0780041621.01.T01:CDS | 45.0% |
| !!! | AGGTTTTGGAGGTGGAGAAT+TGG | - | Chr7:93166180-93166199 | MsG0780041621.01.T01:CDS | 45.0% |
| AAGATGATCGTGGTTGCGGT+TGG | + | Chr7:93165236-93165255 | None:intergenic | 50.0% | |
| AGCTCGTTGAGAAGATCCGA+AGG | - | Chr7:93165492-93165511 | MsG0780041621.01.T01:CDS | 50.0% | |
| CAGTTCCATCTCGTCTTCGT+CGG | + | Chr7:93165360-93165379 | None:intergenic | 50.0% | |
| GCGAGGTAAATTCAACCACG+CGG | - | Chr7:93165729-93165748 | MsG0780041621.01.T01:CDS | 50.0% | |
| TTCGGATCTTCTCAACGAGC+TGG | + | Chr7:93165493-93165512 | None:intergenic | 50.0% | |
| ! | GGAATTGATGGCTGGTGCAA+TGG | - | Chr7:93166090-93166109 | MsG0780041621.01.T01:CDS | 50.0% |
| !! | GCGGTTGGTGTTAGAATTGG+AGG | + | Chr7:93165221-93165240 | None:intergenic | 50.0% |
| AACAACGTAGCGCCAATCGC+CGG | - | Chr7:93165623-93165642 | MsG0780041621.01.T01:CDS | 55.0% | |
| ACTGCTGGGAATGGTGTAGC+TGG | - | Chr7:93166025-93166044 | MsG0780041621.01.T01:CDS | 55.0% | |
| ATGGACCGACGAAGACGAGA+TGG | - | Chr7:93165352-93165371 | MsG0780041621.01.T01:CDS | 55.0% | |
| GCAATGGGAGGAGGACTGTT+TGG | - | Chr7:93166106-93166125 | MsG0780041621.01.T01:CDS | 55.0% | |
| GGCGAAGATGATCGTGGTTG+CGG | + | Chr7:93165240-93165259 | None:intergenic | 55.0% | |
| TGAGTCGGCGAAGATGATCG+TGG | + | Chr7:93165246-93165265 | None:intergenic | 55.0% | |
| ! | TTGATGGCTGGTGCAATGGG+AGG | - | Chr7:93166094-93166113 | MsG0780041621.01.T01:CDS | 55.0% |
| ATGGCTGGTGCAATGGGAGG+AGG | - | Chr7:93166097-93166116 | MsG0780041621.01.T01:CDS | 60.0% | |
| GGAGGACTGTTTGGATCGCG+TGG | - | Chr7:93166115-93166134 | MsG0780041621.01.T01:CDS | 60.0% | |
| TCTGAGAGCTCCTCCGGGAA+CGG | + | Chr7:93165198-93165217 | None:intergenic | 60.0% | |
| TGGAGGTCTGAGAGCTCCTC+CGG | + | Chr7:93165204-93165223 | None:intergenic | 60.0% | |
| !! | CAACCACGCGGAAGCGTTCA+CGG | - | Chr7:93165741-93165760 | MsG0780041621.01.T01:CDS | 60.0% |
| GGAGGTCTGAGAGCTCCTCC+GGG | + | Chr7:93165203-93165222 | None:intergenic | 65.0% | |
| AGCTCCTCCGGGAACGGCGA+CGG | + | Chr7:93165192-93165211 | None:intergenic | 70.0% | |
| AGGCCGTGAACGCTTCCGCG+TGG | + | Chr7:93165747-93165766 | None:intergenic | 70.0% | |
| TCCGGGAACGGCGACGGTGA+CGG | + | Chr7:93165186-93165205 | None:intergenic | 70.0% | |
| TCCGTCACCGTCGCCGTTCC+CGG | - | Chr7:93165182-93165201 | MsG0780041621.01.T01:CDS | 70.0% | |
| !! | GGAACGGCGACGGTGACGGA+GGG | + | Chr7:93165182-93165201 | None:intergenic | 70.0% |
| !! | GGCGACGGTGACGGAGGGAA+CGG | + | Chr7:93165177-93165196 | None:intergenic | 70.0% |
| GTCACCGTCGCCGTTCCCGG+AGG | - | Chr7:93165185-93165204 | MsG0780041621.01.T01:CDS | 75.0% | |
| ! | GGGAACGGCGACGGTGACGG+AGG | + | Chr7:93165183-93165202 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 93165020 | 93166333 | 93165020 | ID=MsG0780041621.01;Name=MsG0780041621.01 |
| Chr7 | mRNA | 93165020 | 93166333 | 93165020 | ID=MsG0780041621.01.T01;Parent=MsG0780041621.01;Name=MsG0780041621.01.T01;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|1|1|0|437 |
| Chr7 | exon | 93165020 | 93166333 | 93165020 | ID=MsG0780041621.01.T01:exon:22057;Parent=MsG0780041621.01.T01 |
| Chr7 | CDS | 93165020 | 93166333 | 93165020 | ID=MsG0780041621.01.T01:cds;Parent=MsG0780041621.01.T01 |
| Gene Sequence |
| Protein sequence |
