AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012525.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012525.01.T01 MTR_3g026620 77.586 290 25 2 42 300 105 385 5.23e-145 418
MsG0380012525.01.T01 MTR_3g026400 73.494 249 57 1 42 290 104 343 3.41e-134 385
MsG0380012525.01.T01 MTR_3g026400 73.494 249 57 1 42 290 73 312 9.71e-132 383
MsG0380012525.01.T01 MTR_3g026400 73.494 249 57 1 42 290 104 343 1.56e-131 383
MsG0380012525.01.T01 MTR_4g066240 56.612 242 97 2 50 290 111 345 7.78e-97 292
MsG0380012525.01.T01 MTR_4g066240 55.200 250 104 2 42 290 103 345 8.48e-96 292
MsG0380012525.01.T01 MTR_4g066240 55.200 250 104 2 42 290 103 345 1.06e-95 292
MsG0380012525.01.T01 MTR_2g098540 57.466 221 93 1 71 290 76 296 4.38e-94 286
MsG0380012525.01.T01 MTR_4g067040 57.207 222 94 1 71 291 123 344 5.51e-94 283
MsG0380012525.01.T01 MTR_4g067040 57.207 222 94 1 71 291 123 344 8.71e-94 283
MsG0380012525.01.T01 MTR_2g098540 57.466 221 93 1 71 290 120 340 9.15e-94 286
MsG0380012525.01.T01 MTR_4g066210 59.276 221 89 1 71 290 132 352 3.91e-93 286
MsG0380012525.01.T01 MTR_2g098790 57.466 221 93 1 71 290 127 347 6.29e-93 285
MsG0380012525.01.T01 MTR_4g066340 53.600 250 108 2 42 290 30 272 4.08e-92 280
MsG0380012525.01.T01 MTR_4g066590 57.466 221 93 1 71 290 122 342 4.47e-92 283
MsG0380012525.01.T01 MTR_4g066640 58.108 222 90 2 71 291 128 347 6.58e-92 278
MsG0380012525.01.T01 MTR_4g066580 56.306 222 96 1 71 291 128 349 1.56e-91 278
MsG0380012525.01.T01 MTR_6g078450 55.405 222 98 1 71 291 125 346 9.00e-91 277
MsG0380012525.01.T01 MTR_3g026280 52.846 246 108 2 46 290 93 331 1.59e-90 278
MsG0380012525.01.T01 MTR_4g066630 55.856 222 97 1 71 291 128 349 1.63e-90 274
MsG0380012525.01.T01 MTR_3g028720 55.405 222 98 1 71 291 127 348 2.34e-90 275
MsG0380012525.01.T01 MTR_4g066580 56.561 221 95 1 71 290 128 348 2.58e-90 278
MsG0380012525.01.T01 MTR_4g066640 58.108 222 90 2 71 291 128 347 4.53e-90 277
MsG0380012525.01.T01 MTR_3g028720 55.405 222 98 1 71 291 127 348 5.51e-90 274
MsG0380012525.01.T01 MTR_6g078450 51.394 251 114 2 42 291 103 346 8.91e-90 277
MsG0380012525.01.T01 MTR_4g066630 55.856 222 97 1 71 291 128 349 1.31e-89 274
MsG0380012525.01.T01 MTR_4g023000 52.245 245 110 1 46 290 95 332 1.68e-89 275
MsG0380012525.01.T01 MTR_3g028720 55.405 222 98 1 71 291 127 348 2.26e-89 274
MsG0380012525.01.T01 MTR_4g066630 55.856 222 97 1 71 291 128 349 2.79e-89 274
MsG0380012525.01.T01 MTR_3g028720 55.656 221 97 1 71 290 127 347 1.62e-88 274
MsG0380012525.01.T01 MTR_4g066630 55.856 222 97 1 71 291 128 349 2.08e-88 273
MsG0380012525.01.T01 MTR_6g078380 52.000 250 112 2 42 290 103 345 2.97e-88 273
MsG0380012525.01.T01 MTR_2g098520 55.656 221 97 1 71 290 123 343 6.12e-87 269
MsG0380012525.01.T01 MTR_6g078330 54.955 222 99 1 71 291 126 347 1.59e-86 264
MsG0380012525.01.T01 MTR_6g078330 55.157 223 99 1 69 290 20 242 1.65e-86 265
MsG0380012525.01.T01 MTR_6g078330 55.204 221 98 1 71 290 22 242 5.07e-86 264
MsG0380012525.01.T01 MTR_0110s0040 56.561 221 96 0 72 292 130 350 2.75e-85 262
MsG0380012525.01.T01 MTR_6g078330 55.204 221 98 1 71 290 126 346 9.13e-85 264
MsG0380012525.01.T01 MTR_0110s0040 57.078 219 94 0 72 290 130 348 7.90e-84 261
MsG0380012525.01.T01 MTR_0110s0030 56.621 219 95 0 72 290 130 348 1.42e-82 258
MsG0380012525.01.T01 MTR_4g066330 48.800 250 96 3 42 291 108 325 2.40e-81 254
MsG0380012525.01.T01 MTR_7g068900 46.718 259 128 2 33 290 12 261 2.75e-80 251
MsG0380012525.01.T01 MTR_4g016920 47.368 247 120 2 46 291 4 241 2.84e-80 246
MsG0380012525.01.T01 MTR_4g083000 47.561 246 119 2 46 290 4 240 3.11e-79 246
MsG0380012525.01.T01 MTR_4g016920 47.368 247 120 2 46 291 4 241 3.24e-79 247
MsG0380012525.01.T01 MTR_5g071520 52.814 231 99 2 71 291 128 358 5.34e-79 249
MsG0380012525.01.T01 MTR_7g068910 47.967 246 118 2 46 290 101 337 6.99e-79 249
MsG0380012525.01.T01 MTR_7g068910 47.967 246 118 2 46 290 111 347 9.95e-79 248
MsG0380012525.01.T01 MTR_4g083000 47.561 246 119 2 46 290 98 334 2.77e-78 247
MsG0380012525.01.T01 MTR_4g016920 47.368 247 120 2 46 291 97 334 5.41e-78 246
MsG0380012525.01.T01 MTR_4g066280 47.200 250 100 3 42 291 108 325 1.13e-77 245
MsG0380012525.01.T01 MTR_5g044000 47.967 246 118 2 46 290 116 352 1.38e-77 245
MsG0380012525.01.T01 MTR_5g068740 44.622 251 128 2 42 290 91 332 4.83e-73 233
MsG0380012525.01.T01 MTR_4g081530 46.964 247 119 4 46 290 94 330 5.60e-73 233
MsG0380012525.01.T01 MTR_1g088610 44.528 265 132 3 42 300 91 346 1.01e-72 236
MsG0380012525.01.T01 MTR_2g079580 47.248 218 115 0 75 292 123 340 3.37e-70 223
MsG0380012525.01.T01 MTR_2g022760 50.463 216 107 0 75 290 25 240 5.46e-70 223
MsG0380012525.01.T01 MTR_3g033810 42.063 252 123 3 42 290 87 318 1.58e-69 224
MsG0380012525.01.T01 MTR_4g015420 45.382 249 104 4 42 290 131 347 4.53e-69 223
MsG0380012525.01.T01 MTR_2g022760 50.463 216 107 0 75 290 128 343 6.31e-69 223
MsG0380012525.01.T01 MTR_4g131810 49.083 218 109 1 75 290 120 337 7.24e-69 223
MsG0380012525.01.T01 MTR_2g079580 47.248 218 115 0 75 292 123 340 7.79e-69 223
MsG0380012525.01.T01 MTR_2g079550 46.789 218 116 0 75 292 121 338 1.32e-68 222
MsG0380012525.01.T01 MTR_3g033790 41.200 250 128 3 42 290 85 316 1.56e-67 218
MsG0380012525.01.T01 MTR_4g015460 46.400 250 102 4 42 291 108 325 2.73e-67 218
MsG0380012525.01.T01 MTR_4g131800 48.387 217 112 0 75 291 607 823 4.83e-67 226
MsG0380012525.01.T01 MTR_2g022710 47.685 216 113 0 75 290 126 341 7.42e-67 214
MsG0380012525.01.T01 MTR_2g022710 47.465 217 114 0 75 291 126 342 8.23e-67 214
MsG0380012525.01.T01 MTR_2g022710 47.685 216 113 0 75 290 126 341 9.25e-67 214
MsG0380012525.01.T01 MTR_2g022710 47.685 216 113 0 75 290 25 240 1.17e-66 214
MsG0380012525.01.T01 MTR_2g022710 47.685 216 113 0 75 290 126 341 2.81e-66 214
MsG0380012525.01.T01 MTR_2g022710 44.939 247 126 2 46 291 105 342 3.84e-66 214
MsG0380012525.01.T01 MTR_2g022710 47.465 217 114 0 75 291 126 342 1.22e-65 214
MsG0380012525.01.T01 MTR_0108s0030 47.511 221 109 2 71 290 92 306 1.01e-64 210
MsG0380012525.01.T01 MTR_1g088630 42.231 251 110 4 42 290 91 308 6.48e-64 206
MsG0380012525.01.T01 MTR_2g043200 47.727 220 90 2 71 290 153 347 2.47e-63 208
MsG0380012525.01.T01 MTR_1g088630 42.231 251 110 4 42 290 59 276 3.07e-63 206
MsG0380012525.01.T01 MTR_7g033860 43.805 226 121 1 71 296 137 356 3.47e-63 207
MsG0380012525.01.T01 MTR_1g088630 45.192 208 103 2 42 247 91 289 5.92e-59 191
MsG0380012525.01.T01 MTR_7g051610 45.455 231 111 2 65 290 151 371 4.25e-55 187
MsG0380012525.01.T01 MTR_7g051510 41.870 246 131 3 45 290 138 371 3.63e-52 179
MsG0380012525.01.T01 MTR_0110s0020 54.362 149 68 0 73 221 131 279 3.57e-51 171
MsG0380012525.01.T01 MTR_7g051650 40.816 245 133 2 46 290 135 367 3.88e-51 176
MsG0380012525.01.T01 MTR_7g051650 40.816 245 133 2 46 290 139 371 3.93e-51 176
MsG0380012525.01.T01 MTR_7g056747 44.248 226 110 3 71 290 36 251 1.32e-50 172
MsG0380012525.01.T01 MTR_8g038650 36.449 107 58 1 195 291 35 141 2.18e-17 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012525.01.T01 AT2G44480 52.439 246 110 1 46 291 4 242 5.49e-92 279
MsG0380012525.01.T01 AT2G44480 52.653 245 109 1 46 290 106 343 9.27e-91 279
MsG0380012525.01.T01 AT2G44480 52.653 245 109 1 46 290 137 374 1.58e-90 280
MsG0380012525.01.T01 AT2G44480 51.779 253 114 2 46 298 137 381 1.15e-89 273
MsG0380012525.01.T01 AT3G18080 50.622 241 110 1 50 290 113 344 1.12e-80 253
MsG0380012525.01.T01 AT3G60130 46.667 270 133 4 25 290 26 288 8.85e-80 249
MsG0380012525.01.T01 AT1G02850 49.333 225 113 1 73 296 112 336 9.08e-80 250
MsG0380012525.01.T01 AT3G60130 46.667 270 133 4 25 290 26 288 1.21e-79 249
MsG0380012525.01.T01 AT2G44450 47.561 246 121 2 46 290 102 340 1.87e-79 250
MsG0380012525.01.T01 AT5G42260 48.571 245 117 3 46 288 102 339 5.20e-79 249
MsG0380012525.01.T01 AT5G44640 46.964 247 122 3 46 290 102 341 2.63e-78 247
MsG0380012525.01.T01 AT2G25630 46.964 247 122 3 46 290 101 340 2.76e-78 246
MsG0380012525.01.T01 AT3G60130 48.988 247 117 3 46 290 101 340 3.75e-77 244
MsG0380012525.01.T01 AT1G02850 45.161 248 112 2 73 296 112 359 3.92e-76 239
MsG0380012525.01.T01 AT5G54570 49.383 243 111 3 50 290 8 240 7.94e-76 238
MsG0380012525.01.T01 AT5G54570 49.383 243 111 3 50 290 105 337 1.19e-75 238
MsG0380012525.01.T01 AT1G02850 45.161 248 112 2 73 296 112 359 3.77e-75 239
MsG0380012525.01.T01 AT1G02850 45.161 248 112 2 73 296 112 359 4.14e-75 239
MsG0380012525.01.T01 AT5G54570 49.383 243 111 3 50 290 105 337 7.88e-75 239
MsG0380012525.01.T01 AT2G32860 51.351 222 106 2 71 290 183 404 1.74e-74 239
MsG0380012525.01.T01 AT4G27830 46.606 221 115 2 72 290 21 240 1.76e-74 234
MsG0380012525.01.T01 AT4G22100 44.578 249 129 1 42 290 84 323 2.07e-74 237
MsG0380012525.01.T01 AT1G26560 45.528 246 124 2 46 290 102 338 2.56e-74 236
MsG0380012525.01.T01 AT5G25980 47.059 221 115 2 71 290 137 356 2.95e-74 235
MsG0380012525.01.T01 AT5G25980 47.059 221 115 2 71 290 137 356 2.95e-74 235
MsG0380012525.01.T01 AT1G51470 50.226 221 106 2 71 290 131 348 3.25e-74 236
MsG0380012525.01.T01 AT5G25980 47.059 221 115 2 71 290 137 356 1.48e-73 236
MsG0380012525.01.T01 AT4G27830 46.606 221 115 2 72 290 109 328 1.76e-73 234
MsG0380012525.01.T01 AT2G32860 51.121 223 106 3 71 290 183 405 2.26e-73 237
MsG0380012525.01.T01 AT1G45191 47.489 219 115 0 72 290 112 330 3.07e-73 231
MsG0380012525.01.T01 AT1G47600 49.774 221 107 2 71 290 131 348 3.16e-73 234
MsG0380012525.01.T01 AT1G47600 49.774 221 107 2 71 290 131 348 3.26e-73 234
MsG0380012525.01.T01 AT1G45191 47.489 219 115 0 72 290 112 330 3.44e-73 231
MsG0380012525.01.T01 AT3G18070 48.416 221 112 1 72 292 117 335 1.26e-72 229
MsG0380012525.01.T01 AT3G18070 47.303 241 110 2 50 290 104 327 1.79e-72 231
MsG0380012525.01.T01 AT1G45191 47.489 219 115 0 72 290 112 330 1.82e-72 232
MsG0380012525.01.T01 AT1G45191 47.489 219 115 0 72 290 112 330 2.21e-72 232
MsG0380012525.01.T01 AT5G26000 47.511 221 115 1 71 290 125 345 2.22e-72 230
MsG0380012525.01.T01 AT1G45191 47.489 219 115 0 72 290 112 330 2.52e-72 231
MsG0380012525.01.T01 AT5G24550 43.028 251 134 3 42 290 98 341 3.51e-72 232
MsG0380012525.01.T01 AT1G45191 47.489 219 115 0 72 290 124 342 3.83e-72 231
MsG0380012525.01.T01 AT5G26000 47.511 221 115 1 71 290 125 345 1.46e-71 230
MsG0380012525.01.T01 AT3G60140 46.091 243 122 3 50 290 100 335 3.16e-71 227
MsG0380012525.01.T01 AT3G18070 46.888 241 117 2 50 290 104 333 3.46e-71 228
MsG0380012525.01.T01 AT4G27820 48.869 221 110 2 72 290 21 240 1.60e-70 224
MsG0380012525.01.T01 AT4G27820 48.869 221 110 2 72 290 21 240 1.60e-70 224
MsG0380012525.01.T01 AT1G60270 45.495 222 121 0 74 295 23 244 1.68e-70 220
MsG0380012525.01.T01 AT1G60090 46.330 218 117 0 73 290 108 325 2.72e-70 226
MsG0380012525.01.T01 AT1G60090 46.330 218 117 0 73 290 108 325 3.32e-70 226
MsG0380012525.01.T01 AT4G21760 48.624 218 112 0 75 292 145 362 3.38e-70 226
MsG0380012525.01.T01 AT4G21760 48.624 218 112 0 75 292 145 362 4.00e-70 226
MsG0380012525.01.T01 AT3G60140 46.091 243 122 3 50 290 100 335 5.86e-70 227
MsG0380012525.01.T01 AT2G44470 47.085 223 116 2 70 290 116 338 1.08e-69 221
MsG0380012525.01.T01 AT4G27820 45.020 251 126 3 42 290 85 325 1.42e-69 224
MsG0380012525.01.T01 AT1G61820 47.926 217 112 1 75 290 122 338 3.61e-69 223
MsG0380012525.01.T01 AT5G24540 48.879 223 112 2 70 290 119 341 3.88e-69 222
MsG0380012525.01.T01 AT1G60270 45.495 222 121 0 74 295 110 331 4.64e-69 219
MsG0380012525.01.T01 AT2G44470 47.085 223 116 2 70 290 116 338 6.39e-69 221
MsG0380012525.01.T01 AT3G03640 46.122 245 120 4 50 290 109 345 8.72e-69 223
MsG0380012525.01.T01 AT5G24540 45.418 251 128 3 42 290 98 341 3.41e-68 221
MsG0380012525.01.T01 AT3G60120 45.749 247 124 5 46 290 84 322 4.18e-68 221
MsG0380012525.01.T01 AT1G02850 42.857 252 107 3 46 296 94 309 4.32e-68 219
MsG0380012525.01.T01 AT2G44470 47.085 223 116 2 70 290 116 338 2.46e-67 220
MsG0380012525.01.T01 AT2G44450 50.265 189 93 1 103 290 1 189 7.85e-67 213
MsG0380012525.01.T01 AT1G61810 47.465 217 113 1 75 290 125 341 2.79e-66 213
MsG0380012525.01.T01 AT5G48375 46.009 213 98 1 78 290 118 313 4.62e-66 213
MsG0380012525.01.T01 AT1G61810 47.465 217 113 1 75 290 25 241 5.00e-66 213
MsG0380012525.01.T01 AT2G44490 46.847 222 115 3 71 290 103 323 1.03e-65 215
MsG0380012525.01.T01 AT1G61810 47.465 217 113 1 75 290 125 341 4.28e-65 213
MsG0380012525.01.T01 AT1G61810 47.465 217 113 1 75 290 125 341 4.34e-65 213
MsG0380012525.01.T01 AT3G62750 43.379 219 116 2 72 290 106 316 2.94e-64 206
MsG0380012525.01.T01 AT3G62750 43.379 219 116 2 72 290 106 316 2.94e-64 206
MsG0380012525.01.T01 AT3G62750 43.379 219 116 2 72 290 21 231 3.91e-64 207
MsG0380012525.01.T01 AT3G62750 43.379 219 116 2 72 290 21 231 3.91e-64 207
MsG0380012525.01.T01 AT3G62750 40.816 245 128 3 46 290 115 342 2.28e-63 206
MsG0380012525.01.T01 AT3G62750 43.379 219 116 2 72 290 132 342 3.88e-63 206
MsG0380012525.01.T01 AT3G62750 43.379 219 116 2 72 290 106 316 5.93e-63 207
MsG0380012525.01.T01 AT1G61820 48.980 196 99 1 96 290 4 199 7.43e-63 203
MsG0380012525.01.T01 AT3G62750 43.379 219 116 2 72 290 132 342 8.84e-63 207
MsG0380012525.01.T01 AT3G62740 42.601 223 117 2 72 290 107 322 5.25e-62 202
MsG0380012525.01.T01 AT1G75940 44.000 225 120 3 71 290 125 348 5.90e-62 205
MsG0380012525.01.T01 AT3G09260 44.595 222 120 3 71 290 123 343 1.38e-61 204
MsG0380012525.01.T01 AT3G62740 42.601 223 117 2 72 290 107 322 1.49e-61 203
MsG0380012525.01.T01 AT1G52400 43.852 244 122 5 53 290 114 348 4.53e-61 201
MsG0380012525.01.T01 AT1G66280 43.946 223 119 3 71 290 124 343 6.33e-61 202
MsG0380012525.01.T01 AT1G52400 43.852 244 122 5 53 290 114 348 2.77e-60 201
MsG0380012525.01.T01 AT1G52400 43.852 244 122 5 53 290 114 348 2.77e-60 201
MsG0380012525.01.T01 AT5G36890 41.245 257 130 5 38 290 75 314 4.18e-60 199
MsG0380012525.01.T01 AT5G36890 41.245 257 130 5 38 290 75 314 4.51e-60 199
MsG0380012525.01.T01 AT1G66270 43.498 223 120 3 71 290 124 343 2.89e-59 197
MsG0380012525.01.T01 AT3G21370 41.964 224 124 3 71 290 121 342 2.52e-58 195
MsG0380012525.01.T01 AT2G44460 47.534 223 114 3 70 290 116 337 2.71e-58 196
MsG0380012525.01.T01 AT1G61810 50.000 176 88 0 75 250 125 300 9.16e-58 188
MsG0380012525.01.T01 AT5G28510 42.291 227 123 3 71 290 127 352 2.60e-56 190
MsG0380012525.01.T01 AT1G66270 43.049 223 119 4 71 290 124 341 3.35e-56 189
MsG0380012525.01.T01 AT3G18070 53.503 157 73 0 136 292 102 258 1.12e-55 184
MsG0380012525.01.T01 AT3G18070 54.194 155 71 0 136 290 102 256 5.70e-55 184
MsG0380012525.01.T01 AT1G51490 43.750 224 111 6 71 290 106 318 1.26e-53 180
MsG0380012525.01.T01 AT2G44460 47.917 192 97 3 101 290 1 191 1.67e-48 167
MsG0380012525.01.T01 AT3G18070 51.370 146 71 0 147 292 1 146 2.00e-48 161
MsG0380012525.01.T01 AT2G44480 53.676 136 63 0 155 290 2 137 5.57e-48 163
MsG0380012525.01.T01 AT3G18070 52.083 144 69 0 147 290 1 144 9.96e-48 162
MsG0380012525.01.T01 AT5G16580 46.951 164 82 2 128 290 27 186 2.64e-42 147

Find 88 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCATATTACCTGATATT+TGG 0.172492 3:+19167367 None:intergenic
ATATTTGGCCTTATACAATT+TGG 0.224460 3:+19167382 None:intergenic
TGCTATCAGGTTTCCGTTAT+CGG 0.230878 3:-19172333 MsG0380012525.01.T01:CDS
CCTGTTTCCTACACCATTAA+TGG 0.257308 3:-19167530 MsG0380012525.01.T01:CDS
AGCTCTTGAAGATGAATATA+AGG 0.306210 3:-19167785 MsG0380012525.01.T01:CDS
GCTTGATTCGTGAACATAAA+TGG 0.321382 3:+19171998 None:intergenic
CCTTTGTAACATTGTTTCAT+TGG 0.325125 3:-19167819 MsG0380012525.01.T01:CDS
CCATTGGGCCACCTGCTATC+AGG 0.334404 3:-19172346 MsG0380012525.01.T01:CDS
GCTTCAAGACATTTGGAGAT+AGG 0.339805 3:-19167580 MsG0380012525.01.T01:CDS
GCCTCCATGGTAGCCATTAA+TGG 0.340664 3:+19167517 None:intergenic
CCAAGGATAATATTATTGAT+TGG 0.350885 3:+19166671 None:intergenic
CTCCTCACGACCAGCACTAT+TGG 0.351478 3:+19172281 None:intergenic
GGATAGTGACCATATGTAAT+TGG 0.352960 3:+19166694 None:intergenic
CCATTGGGCCACCTGCTATC+AGG 0.353611 3:-19172377 MsG0380012525.01.T01:CDS
CAAGGATAATATTATTGATT+GGG 0.357025 3:+19166672 None:intergenic
CCCCTCACGACCAGCACTAT+TGG 0.357328 3:+19171976 None:intergenic
CCATTAATGGTGTAGGAAAC+AGG 0.365400 3:+19167530 None:intergenic
AGGTTGGGCCACCTGCTATC+AGG 0.367025 3:-19172042 MsG0380012525.01.T01:CDS
GTACCATAGGCTCATCAAAA+AGG 0.377579 3:-19166979 MsG0380012525.01.T01:intron
TGCTGCAGCCAAATTGTATA+AGG 0.379528 3:-19167390 MsG0380012525.01.T01:CDS
GGCTTGGTTCGTGTACATAA+AGG 0.387837 3:+19172302 None:intergenic
CTTTGTAACATTGTTTCATT+GGG 0.391227 3:-19167818 MsG0380012525.01.T01:CDS
CCAATCAATAATATTATCCT+TGG 0.399351 3:-19166671 MsG0380012525.01.T01:CDS
ACATATTTAGAGCATCTTGC+AGG 0.404850 3:+19167485 None:intergenic
TGGAGATAGGGTTAAGCATT+GGG 0.413839 3:-19167567 MsG0380012525.01.T01:CDS
CTATCAGGTTGGGCATCCAT+TGG 0.415986 3:-19172362 MsG0380012525.01.T01:CDS
GCTATCAGGTTTCCGTTATC+GGG 0.422306 3:-19172332 MsG0380012525.01.T01:CDS
ATTGTATAAGGCCAAATATC+AGG 0.426496 3:-19167378 MsG0380012525.01.T01:intron
GGGCCACCTGCTATCAGGTT+GGG 0.428043 3:-19172372 MsG0380012525.01.T01:CDS
CTTCAAGACATTTGGAGATA+GGG 0.430530 3:-19167579 MsG0380012525.01.T01:CDS
TCGGCAACACTGTTGGAATA+TGG 0.431160 3:+19166919 None:intergenic
TTTGCTCATCCAATTACATA+TGG 0.434508 3:-19166703 MsG0380012525.01.T01:CDS
ATTCACACCAAGAAAATCAT+AGG 0.436183 3:+19166597 None:intergenic
TATGTTGGAAATTGCTCTAC+TGG 0.447346 3:-19167467 MsG0380012525.01.T01:CDS
ATGAAGAATGGTGTAGCTAT+TGG 0.450804 3:-19166370 MsG0380012525.01.T01:CDS
TTGGAGATAGGGTTAAGCAT+TGG 0.464172 3:-19167568 MsG0380012525.01.T01:CDS
TGGGCCACCTGCTATCAGGT+TGG 0.467635 3:-19172373 MsG0380012525.01.T01:CDS
CACGACCAGCACTATTGGCT+TGG 0.472485 3:+19172286 None:intergenic
GCTCTTGAAGATGAATATAA+GGG 0.479354 3:-19167784 MsG0380012525.01.T01:CDS
GCAAGATGCTCTAAATATGT+TGG 0.487404 3:-19167482 MsG0380012525.01.T01:CDS
AAAGCCTCTCCATGATCCAT+TGG 0.487416 3:-19172393 MsG0380012525.01.T01:CDS
TATCAGGTTGGGCATCCATT+GGG 0.494945 3:-19172361 MsG0380012525.01.T01:CDS
ATTAATGAGGTCCTAGCAAA+TGG 0.496953 3:-19167981 MsG0380012525.01.T01:intron
AAGTGATGAGCAACAATGTA+GGG 0.499808 3:+19167428 None:intergenic
CAAGGGAGCAGTCAATCCTA+TGG 0.499863 3:-19168027 MsG0380012525.01.T01:CDS
AAAGGTGGGTGGCCCGATAA+CGG 0.513836 3:+19172320 None:intergenic
AAGCCTCTCCATGATCCATT+GGG 0.516574 3:-19172392 MsG0380012525.01.T01:CDS
GCAGGTGGCCCAATGGATCA+TGG 0.519154 3:+19172384 None:intergenic
CAATGAAACAATGTTACAAA+GGG 0.519446 3:+19167820 None:intergenic
TTCATAGTAGTGAGTAATCA+AGG 0.524814 3:+19166942 None:intergenic
CAATCAATAATATTATCCTT+GGG 0.527755 3:-19166670 MsG0380012525.01.T01:CDS
TGGTGTAGCTATTGGCTCCT+CGG 0.529880 3:-19166362 MsG0380012525.01.T01:CDS
TGGATGCCCAACCTGATAGC+AGG 0.531731 3:+19172366 None:intergenic
TCTACTTGCAGCTTTGTGAT+CGG 0.532372 3:+19166900 None:intergenic
ATGGTAGCCATTAATGGTGT+AGG 0.532761 3:+19167523 None:intergenic
TTTGTGATCGGCAACACTGT+TGG 0.541444 3:+19166912 None:intergenic
CAGGTGGAGAAGTGCCTCCA+TGG 0.544070 3:+19167504 None:intergenic
CCTGATAGCAGGTGGCCCAA+TGG 0.546826 3:+19172377 None:intergenic
AAAGTGATGAGCAACAATGT+AGG 0.552733 3:+19167427 None:intergenic
TTGATCACAGCAATGAAGAA+TGG 0.553953 3:-19166382 MsG0380012525.01.T01:intron
GAGGGCGTTTACCATTTGCT+AGG 0.554661 3:+19167970 None:intergenic
CCTGATAGCAGGTGGCCCAA+TGG 0.559334 3:+19172346 None:intergenic
AAGGATAATATTATTGATTG+GGG 0.560825 3:+19166673 None:intergenic
ACGAATCAAGCCAATAGTGC+TGG 0.560998 3:-19171986 MsG0380012525.01.T01:CDS
CTACAATAATGTCATTAATG+AGG 0.565892 3:-19167994 MsG0380012525.01.T01:CDS
TATTCATCTTCAAGAGCTCG+TGG 0.569196 3:+19167790 None:intergenic
CCAATGAAACAATGTTACAA+AGG 0.572524 3:+19167819 None:intergenic
TTGTAGAATTTAACTCCCAT+AGG 0.573321 3:+19168011 None:intergenic
GAAGAATCTAAAATTATCAA+AGG 0.580964 3:-19166622 MsG0380012525.01.T01:CDS
TTGGTTCGTGTACATAAAGG+TGG 0.581034 3:+19172305 None:intergenic
GATAACGGAAACCTGATAGC+AGG 0.583945 3:+19172335 None:intergenic
TATTTAGAGCATCTTGCAGG+TGG 0.584647 3:+19167488 None:intergenic
GATATCATATACAGAGGGCA+AGG 0.588586 3:-19168045 MsG0380012525.01.T01:intron
TACACCATTAATGGCTACCA+TGG 0.593079 3:-19167521 MsG0380012525.01.T01:CDS
GATAACGAAAACCTGATAGC+AGG 0.593538 3:+19172031 None:intergenic
ACGAACCAAGCCAATAGTGC+TGG 0.594500 3:-19172291 MsG0380012525.01.T01:CDS
AAGGGAGCAGTCAATCCTAT+GGG 0.598556 3:-19168026 MsG0380012525.01.T01:CDS
TGGTTCGTGTACATAAAGGT+GGG 0.638284 3:+19172306 None:intergenic
ACCATTAATGGCTACCATGG+AGG 0.642671 3:-19167518 MsG0380012525.01.T01:CDS
ATATCATATACAGAGGGCAA+GGG 0.643133 3:-19168044 MsG0380012525.01.T01:intron
AACGAAAACCTGATAGCAGG+TGG 0.655710 3:+19172034 None:intergenic
AACGGAAACCTGATAGCAGG+TGG 0.655710 3:+19172338 None:intergenic
TGGCCCAATGGATCATGGAG+AGG 0.657805 3:+19172389 None:intergenic
TTCGTGTACATAAAGGTGGG+TGG 0.666111 3:+19172309 None:intergenic
GATTCGTGAACATAAATGGT+GGG 0.675210 3:+19172002 None:intergenic
ATGCCCAACCTGATAGCAGG+TGG 0.679018 3:+19172369 None:intergenic
TGATTCGTGAACATAAATGG+TGG 0.697710 3:+19172001 None:intergenic
TCGTGAACATAAATGGTGGG+TGG 0.724693 3:+19172005 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAAAAAAAAATTATACAA+TGG + Chr3:19172306-19172325 None:intergenic 10.0%
!! ATGTGAAAATTAAATATTTA+TGG + Chr3:19169776-19169795 None:intergenic 10.0%
!! CTTAATTTAATGAATAAAAT+AGG - Chr3:19171127-19171146 MsG0380012525.01.T01:intron 10.0%
!!! AAATTTATTTTTTGTTAATG+TGG + Chr3:19169604-19169623 None:intergenic 10.0%
!!! ATTTATTTTATTTTTGCAAT+AGG + Chr3:19171038-19171057 None:intergenic 10.0%
!! AACAATATGTTTATAAAAGT+GGG - Chr3:19166842-19166861 MsG0380012525.01.T01:intron 15.0%
!! ATAAAGATTATGAAAGAAAT+TGG - Chr3:19169858-19169877 MsG0380012525.01.T01:intron 15.0%
!! ATGGAATTTGAAAAAAATAA+TGG - Chr3:19169261-19169280 MsG0380012525.01.T01:intron 15.0%
!! ATTTAATGAATAAAATAGGA+AGG - Chr3:19171131-19171150 MsG0380012525.01.T01:intron 15.0%
!! TAAAGATTATGAAAGAAATT+GGG - Chr3:19169859-19169878 MsG0380012525.01.T01:intron 15.0%
!! TAACAATATGTTTATAAAAG+TGG - Chr3:19166841-19166860 MsG0380012525.01.T01:intron 15.0%
!! TAACAATATGTTTATAAAGT+GGG - Chr3:19166884-19166903 MsG0380012525.01.T01:CDS 15.0%
!! TTAAGTAGAAAAAAAAAATG+AGG - Chr3:19169208-19169227 MsG0380012525.01.T01:intron 15.0%
!! TTAGCTAATTAAAAAAATCA+AGG - Chr3:19168270-19168289 MsG0380012525.01.T01:intron 15.0%
!!! AAAATGTTACAAGATTTTTA+CGG - Chr3:19170231-19170250 MsG0380012525.01.T01:intron 15.0%
!!! AAATTTTTTTATATATACGG+TGG - Chr3:19170904-19170923 MsG0380012525.01.T01:intron 15.0%
!!! ACTTTTATAAACATATTGTT+AGG + Chr3:19166842-19166861 None:intergenic 15.0%
!!! ATTGACATTTCATTTTATTT+AGG - Chr3:19170172-19170191 MsG0380012525.01.T01:intron 15.0%
!!! ATTTCATTTTATTTAGGAAA+TGG - Chr3:19170178-19170197 MsG0380012525.01.T01:intron 15.0%
!!! ATTTTTTCAGTAAAAAAATC+GGG + Chr3:19170216-19170235 None:intergenic 15.0%
!!! CATTTTTTCAGTAAAAAAAT+CGG + Chr3:19170217-19170236 None:intergenic 15.0%
!!! GAATATTACATGATTTTTTT+GGG - Chr3:19170015-19170034 MsG0380012525.01.T01:intron 15.0%
!!! TATTTCTTTTTTGTTAACAT+CGG + Chr3:19169992-19170011 None:intergenic 15.0%
!!! TCAATGTTATTTTCATAAAA+TGG + Chr3:19172001-19172020 None:intergenic 15.0%
!!! TGAATAAACATTAATTTTTC+AGG - Chr3:19172032-19172051 MsG0380012525.01.T01:CDS 15.0%
!!! TTCAATTATTTTGTAGAATT+AGG + Chr3:19168893-19168912 None:intergenic 15.0%
!!! TTTTCAAATTCCATATTTTA+GGG + Chr3:19169255-19169274 None:intergenic 15.0%
!!! TTTTTCAAATTCCATATTTT+AGG + Chr3:19169256-19169275 None:intergenic 15.0%
!! AAAAAAATAATAGAGTAACC+TGG + Chr3:19169500-19169519 None:intergenic 20.0%
!! AAATCTTTGCCTTAAAATTT+AGG + Chr3:19167275-19167294 None:intergenic 20.0%
!! AACAATATGTTTATAAAGTG+GGG - Chr3:19166885-19166904 MsG0380012525.01.T01:CDS 20.0%
!! AATTATCTAAGTAACAAACT+AGG - Chr3:19167826-19167845 MsG0380012525.01.T01:CDS 20.0%
!! ACAATATGTTTATAAAAGTG+GGG - Chr3:19166843-19166862 MsG0380012525.01.T01:intron 20.0%
!! ATGGTATGTATAATAATCTA+TGG - Chr3:19171901-19171920 MsG0380012525.01.T01:intron 20.0%
!! ATTCAAATAGTGATTATATG+AGG + Chr3:19170810-19170829 None:intergenic 20.0%
!! CAATCAATAATATTATCCTT+GGG - Chr3:19172088-19172107 MsG0380012525.01.T01:intron 20.0%
!! CAATTGATGAAATTTATGAT+TGG - Chr3:19171757-19171776 MsG0380012525.01.T01:intron 20.0%
!! CACTTTATAAACATATTGTT+AGG + Chr3:19166885-19166904 None:intergenic 20.0%
!! CTAACAATATGTTTATAAAG+TGG - Chr3:19166883-19166902 MsG0380012525.01.T01:CDS 20.0%
!! GAAAAATTTGTACAAACAAA+AGG + Chr3:19169409-19169428 None:intergenic 20.0%
!! GAATTTGAAAAAAATAATGG+AGG - Chr3:19169264-19169283 MsG0380012525.01.T01:intron 20.0%
!! TTAATCACTTAAATGTTACT+TGG + Chr3:19169947-19169966 None:intergenic 20.0%
!! TTCAAATAGTGATTATATGA+GGG + Chr3:19170809-19170828 None:intergenic 20.0%
!! TTGTAAGTTCATAATGATTT+AGG + Chr3:19167715-19167734 None:intergenic 20.0%
!!! AAGGATAATATTATTGATTG+GGG + Chr3:19172088-19172107 None:intergenic 20.0%
!!! AATTTTAAGGCAAAGATTTA+TGG - Chr3:19167276-19167295 MsG0380012525.01.T01:intron 20.0%
!!! AGTGTAATTTTTTTTTCTAG+AGG - Chr3:19170466-19170485 MsG0380012525.01.T01:intron 20.0%
!!! ATTCTTCTTTTGTGAATTTT+GGG + Chr3:19172123-19172142 None:intergenic 20.0%
!!! CAAGGATAATATTATTGATT+GGG + Chr3:19172089-19172108 None:intergenic 20.0%
!!! CGAATATTACATGATTTTTT+TGG - Chr3:19170014-19170033 MsG0380012525.01.T01:intron 20.0%
!!! GAAGAATCTAAAATTATCAA+AGG - Chr3:19172136-19172155 MsG0380012525.01.T01:intron 20.0%
!!! TTTCAAATTCCATATTTTAG+GGG + Chr3:19169254-19169273 None:intergenic 20.0%
!!! TTTGTTTGTACAAATTTTTC+AGG - Chr3:19169409-19169428 MsG0380012525.01.T01:intron 20.0%
! AAATTTATGATTGGTACCAT+AGG - Chr3:19171766-19171785 MsG0380012525.01.T01:intron 25.0%
! AAGTAGAGATGATTATTGTT+GGG - Chr3:19167198-19167217 MsG0380012525.01.T01:intron 25.0%
! AATATTGAACTAACAACACA+AGG - Chr3:19172339-19172358 MsG0380012525.01.T01:CDS 25.0%
! ACAATAATCATCTCTACTTA+AGG + Chr3:19167197-19167216 None:intergenic 25.0%
! ACAATATGTTTATAAAGTGG+GGG - Chr3:19166886-19166905 MsG0380012525.01.T01:CDS 25.0%
! ACATTTATACACCAAAACTT+TGG + Chr3:19170084-19170103 None:intergenic 25.0%
! ATAATAATATACGTAAGGTC+CGG - Chr3:19170356-19170375 MsG0380012525.01.T01:intron 25.0%
! ATCCTTACAAAACATATGTT+AGG + Chr3:19166537-19166556 None:intergenic 25.0%
! ATGAAACAAAGTCTTAGAAA+TGG + Chr3:19166962-19166981 None:intergenic 25.0%
! ATGCACAAATCCAAAATTTA+TGG - Chr3:19167012-19167031 MsG0380012525.01.T01:intron 25.0%
! CAATAATCATCTCTACTTAA+GGG + Chr3:19167196-19167215 None:intergenic 25.0%
! CAATATGTTTATAAAAGTGG+GGG - Chr3:19166844-19166863 MsG0380012525.01.T01:intron 25.0%
! CAATGAAACAATGTTACAAA+GGG + Chr3:19170941-19170960 None:intergenic 25.0%
! CCAAGGATAATATTATTGAT+TGG + Chr3:19172090-19172109 None:intergenic 25.0%
! CCAATCAATAATATTATCCT+TGG - Chr3:19172087-19172106 MsG0380012525.01.T01:intron 25.0%
! CTACAATAATGTCATTAATG+AGG - Chr3:19170764-19170783 MsG0380012525.01.T01:intron 25.0%
! CTGTTAGAATTATCATAGTT+TGG + Chr3:19167752-19167771 None:intergenic 25.0%
! CTTTGTAACATTGTTTCATT+GGG - Chr3:19170940-19170959 MsG0380012525.01.T01:intron 25.0%
! GACTTCAGAAAAAAAATGAT+AGG - Chr3:19169315-19169334 MsG0380012525.01.T01:intron 25.0%
! GACTTTATGTCAAAAACTTA+AGG - Chr3:19168533-19168552 MsG0380012525.01.T01:intron 25.0%
! GATCAAACCAAATTAAAAAG+TGG - Chr3:19171616-19171635 MsG0380012525.01.T01:intron 25.0%
! GCATAAAGAATTAAGTATCA+CGG + Chr3:19168800-19168819 None:intergenic 25.0%
! GGAAATATTCTTATCTTACT+TGG + Chr3:19169926-19169945 None:intergenic 25.0%
! TAAGTAGAGATGATTATTGT+TGG - Chr3:19167197-19167216 MsG0380012525.01.T01:intron 25.0%
! TAATCTAAACCCCTAAAATA+TGG - Chr3:19169242-19169261 MsG0380012525.01.T01:intron 25.0%
! TCCTTACAAAACATATTGTT+AGG + Chr3:19166625-19166644 None:intergenic 25.0%
! TGATCATATTACCTGATATT+TGG + Chr3:19171394-19171413 None:intergenic 25.0%
!! AAAATAATGGAGGATAATGT+TGG - Chr3:19169274-19169293 MsG0380012525.01.T01:intron 25.0%
!! ACACTCTTACCTAAATTTTA+AGG - Chr3:19167263-19167282 MsG0380012525.01.T01:intron 25.0%
!! GATTCTTCTTTTGTGAATTT+TGG + Chr3:19172124-19172143 None:intergenic 25.0%
!! TCCTAACAATATGTTTTGTA+AGG - Chr3:19166621-19166640 MsG0380012525.01.T01:CDS 25.0%
!! TGATTTTTATCATCGATACA+AGG - Chr3:19169689-19169708 MsG0380012525.01.T01:intron 25.0%
!!! ATATTTGGCCTTATACAATT+TGG + Chr3:19171379-19171398 None:intergenic 25.0%
!!! ATCGATTTTAAAAGTGTAAG+TGG + Chr3:19171599-19171618 None:intergenic 25.0%
!!! ATTTCTAAGACTTTGTTTCA+TGG - Chr3:19166961-19166980 MsG0380012525.01.T01:CDS 25.0%
!!! ATTTTATTTAGGAAATGGAG+AGG - Chr3:19170183-19170202 MsG0380012525.01.T01:intron 25.0%
!!! GATGTAACCATTATTTTGAA+AGG + Chr3:19167684-19167703 None:intergenic 25.0%
!!! TATACAATGGCTTATTTTAC+TGG + Chr3:19172293-19172312 None:intergenic 25.0%
!!! TTTCTAAGACTTTGTTTCAT+GGG - Chr3:19166962-19166981 MsG0380012525.01.T01:CDS 25.0%
AAACAAAGTCTTAGAAATGG+TGG + Chr3:19166959-19166978 None:intergenic 30.0%
AACACTTTATAAGTGAGAGA+GGG + Chr3:19167306-19167325 None:intergenic 30.0%
AATGCTTTGTGCATAATATG+TGG + Chr3:19172194-19172213 None:intergenic 30.0%
ACCTCATTCGTAAGTATTTA+TGG - Chr3:19172259-19172278 MsG0380012525.01.T01:intron 30.0%
AGCTCTTGAAGATGAATATA+AGG - Chr3:19170973-19170992 MsG0380012525.01.T01:intron 30.0%
AGTAACTGTCGATCTTAATT+CGG + Chr3:19171647-19171666 None:intergenic 30.0%
AGTTTCCACGTTAAAAATTC+TGG + Chr3:19167661-19167680 None:intergenic 30.0%
ATACACCAAAACTTTGGTAA+TGG + Chr3:19170078-19170097 None:intergenic 30.0%
ATTCACACCAAGAAAATCAT+AGG + Chr3:19172164-19172183 None:intergenic 30.0%
ATTGTATAAGGCCAAATATC+AGG - Chr3:19171380-19171399 MsG0380012525.01.T01:intron 30.0%
ATTTGTCACTATGTGTATCT+TGG - Chr3:19169174-19169193 MsG0380012525.01.T01:intron 30.0%
CAAATGGAGAGAACTTAAAA+TGG + Chr3:19170053-19170072 None:intergenic 30.0%
CACAAATCCAAAATTTATGG+AGG - Chr3:19167015-19167034 MsG0380012525.01.T01:intron 30.0%
CCAATGAAACAATGTTACAA+AGG + Chr3:19170942-19170961 None:intergenic 30.0%
CCTTTGTAACATTGTTTCAT+TGG - Chr3:19170939-19170958 MsG0380012525.01.T01:intron 30.0%
CTGCGTGAAAATAAATAGAA+AGG + Chr3:19167875-19167894 None:intergenic 30.0%
GATTATGAAAGAAATTGGGT+TGG - Chr3:19169863-19169882 MsG0380012525.01.T01:intron 30.0%
GCAATGATATCATATACAGA+GGG - Chr3:19170708-19170727 MsG0380012525.01.T01:intron 30.0%
GCTCATCAAAAAGGAAAAAT+TGG - Chr3:19171788-19171807 MsG0380012525.01.T01:intron 30.0%
GCTCTTGAAGATGAATATAA+GGG - Chr3:19170974-19170993 MsG0380012525.01.T01:intron 30.0%
GGAAACTCCTTTCAAAATAA+TGG - Chr3:19167674-19167693 MsG0380012525.01.T01:intron 30.0%
TAACACTTTATAAGTGAGAG+AGG + Chr3:19167307-19167326 None:intergenic 30.0%
TAATAATATACGTAAGGTCC+GGG - Chr3:19170357-19170376 MsG0380012525.01.T01:intron 30.0%
TCCATAAATACTTACGAATG+AGG + Chr3:19172263-19172282 None:intergenic 30.0%
TGCAATGATATCATATACAG+AGG - Chr3:19170707-19170726 MsG0380012525.01.T01:intron 30.0%
TTAATAAAGCCACATTCTCT+AGG - Chr3:19169963-19169982 MsG0380012525.01.T01:intron 30.0%
TTATCGAATATTAGAGCTCA+TGG - Chr3:19169577-19169596 MsG0380012525.01.T01:intron 30.0%
TTATTGGGTGAAATCAATGT+GGG + Chr3:19170602-19170621 None:intergenic 30.0%
TTCATAGTAGTGAGTAATCA+AGG + Chr3:19171819-19171838 None:intergenic 30.0%
TTGATGCCTCAAAAAATATG+AGG - Chr3:19169020-19169039 MsG0380012525.01.T01:intron 30.0%
TTGATTGAGCAGAAAAGATT+GGG - Chr3:19169640-19169659 MsG0380012525.01.T01:intron 30.0%
TTGGGTAGATGATTATTGTT+GGG - Chr3:19167216-19167235 MsG0380012525.01.T01:intron 30.0%
TTGTAGAATTTAACTCCCAT+AGG + Chr3:19170750-19170769 None:intergenic 30.0%
TTTATTGGGTGAAATCAATG+TGG + Chr3:19170603-19170622 None:intergenic 30.0%
TTTGCTCATCCAATTACATA+TGG - Chr3:19172055-19172074 MsG0380012525.01.T01:intron 30.0%
! AAAGGTTCCTATGATTTTCT+TGG - Chr3:19172154-19172173 MsG0380012525.01.T01:intron 30.0%
! AGAGCTTCCAAAATCATTTT+GGG + Chr3:19167489-19167508 None:intergenic 30.0%
! ATGTTTTGTAAGGATGAGTT+AGG - Chr3:19166542-19166561 MsG0380012525.01.T01:intron 30.0%
! ATTCTTTTACCACTATGTGA+TGG - Chr3:19170275-19170294 MsG0380012525.01.T01:intron 30.0%
! CTACAATCCTCCATAAATTT+TGG + Chr3:19167025-19167044 None:intergenic 30.0%
! GATTTTTGCTTCAAGACATT+TGG - Chr3:19171171-19171190 MsG0380012525.01.T01:intron 30.0%
! GTCCTAACATATGTTTTGTA+AGG - Chr3:19166532-19166551 MsG0380012525.01.T01:intron 30.0%
! GTTGTTGTTATTGTTGTTGT+TGG + Chr3:19167610-19167629 None:intergenic 30.0%
! TAGAGCTTCCAAAATCATTT+TGG + Chr3:19167490-19167509 None:intergenic 30.0%
! TCTAGTACTCACTCTTTTAT+TGG - Chr3:19170521-19170540 MsG0380012525.01.T01:intron 30.0%
! TCTATTTGGGATACCTATTA+GGG + Chr3:19167779-19167798 None:intergenic 30.0%
! TGTTTTCTCTCTGTCTATTT+GGG + Chr3:19167792-19167811 None:intergenic 30.0%
! TTAGCACTCACTCTTTTATT+GGG + Chr3:19170617-19170636 None:intergenic 30.0%
! TTGTTCCATTACCAAAGTTT+TGG - Chr3:19170070-19170089 MsG0380012525.01.T01:intron 30.0%
! TTGTTTTCTCTCTGTCTATT+TGG + Chr3:19167793-19167812 None:intergenic 30.0%
! TTTAGCACTCACTCTTTTAT+TGG + Chr3:19170618-19170637 None:intergenic 30.0%
! TTTTATCATCGATACAAGGT+AGG - Chr3:19169693-19169712 MsG0380012525.01.T01:intron 30.0%
!! AACTTTGGTAATGGAACAAA+TGG + Chr3:19170069-19170088 None:intergenic 30.0%
!! AAGGAGCATCAAATATAGAT+GGG - Chr3:19169435-19169454 MsG0380012525.01.T01:intron 30.0%
!! AGAGCACTTGACTTTTTATT+TGG - Chr3:19171878-19171897 MsG0380012525.01.T01:intron 30.0%
!! CACAGTTGGCAAATTTTAAT+TGG - Chr3:19168601-19168620 MsG0380012525.01.T01:intron 30.0%
!! CACTTGACTTTTTATTTGGA+TGG - Chr3:19171882-19171901 MsG0380012525.01.T01:intron 30.0%
!! GTTTTTGTCTTAGTCTTTTG+AGG - Chr3:19169736-19169755 MsG0380012525.01.T01:intron 30.0%
!! TCCATTTTTCTATCTGATGT+GGG - Chr3:19167331-19167350 MsG0380012525.01.T01:intron 30.0%
!!! AGAATTTTTCAAGACACAGT+TGG - Chr3:19168587-19168606 MsG0380012525.01.T01:intron 30.0%
!!! GGTTCAACCACTTTTTAATT+TGG + Chr3:19171626-19171645 None:intergenic 30.0%
!!! GTACAAATTTTTCAGGTAGA+AGG - Chr3:19169416-19169435 MsG0380012525.01.T01:intron 30.0%
!!! TTTTTTATATATACGGTGGC+AGG - Chr3:19170908-19170927 MsG0380012525.01.T01:intron 30.0%
AAAAGAGTGAGTGCTAAAGA+GGG - Chr3:19170620-19170639 MsG0380012525.01.T01:intron 35.0%
AAAGTCTTAGAAATGGTGGT+TGG + Chr3:19166955-19166974 None:intergenic 35.0%
AAAGTGATGAGCAACAATGT+AGG + Chr3:19171334-19171353 None:intergenic 35.0%
AAGTCTTAGAAATGGTGGTT+GGG + Chr3:19166954-19166973 None:intergenic 35.0%
AAGTGATGAGCAACAATGTA+GGG + Chr3:19171333-19171352 None:intergenic 35.0%
AATAATATACGTAAGGTCCG+GGG - Chr3:19170358-19170377 MsG0380012525.01.T01:intron 35.0%
ACCACCAAAAAAAAAGAGAC+GGG - Chr3:19170392-19170411 MsG0380012525.01.T01:intron 35.0%
AGTGTGAAATGCGGAATATA+TGG - Chr3:19167529-19167548 MsG0380012525.01.T01:CDS 35.0%
ATATATGCAGCAACCAATGA+CGG + Chr3:19169081-19169100 None:intergenic 35.0%
ATATCATATACAGAGGGCAA+GGG - Chr3:19170714-19170733 MsG0380012525.01.T01:intron 35.0%
ATGAAGAATGGTGTAGCTAT+TGG - Chr3:19172388-19172407 MsG0380012525.01.T01:CDS 35.0%
ATTAATGAGGTCCTAGCAAA+TGG - Chr3:19170777-19170796 MsG0380012525.01.T01:intron 35.0%
CACATCAGATAGAAAAATGG+AGG + Chr3:19167332-19167351 None:intergenic 35.0%
CACTATTATCCGAAACCTTA+AGG - Chr3:19168098-19168117 MsG0380012525.01.T01:intron 35.0%
CAGAGAAAAGAGATAGAAGA+GGG + Chr3:19168379-19168398 None:intergenic 35.0%
CTATTTGCCACAATTCAAGA+AGG + Chr3:19168663-19168682 None:intergenic 35.0%
CTTCAAGACATTTGGAGATA+GGG - Chr3:19171179-19171198 MsG0380012525.01.T01:intron 35.0%
CTTGAAGCAAAAATCAGCAT+AGG + Chr3:19171166-19171185 None:intergenic 35.0%
CTTGATTGAGCAGAAAAGAT+TGG - Chr3:19169639-19169658 MsG0380012525.01.T01:intron 35.0%
GAAGTAGGTCATGTTGATAT+GGG + Chr3:19172223-19172242 None:intergenic 35.0%
GAATATTCTTGACCATGAGA+TGG + Chr3:19169904-19169923 None:intergenic 35.0%
GACCACCAAAAAAAAAGAGA+CGG - Chr3:19170391-19170410 MsG0380012525.01.T01:intron 35.0%
GATTCGTGAACATAAATGGT+GGG + Chr3:19166759-19166778 None:intergenic 35.0%
GGATAGTGACCATATGTAAT+TGG + Chr3:19172067-19172086 None:intergenic 35.0%
GTTGGGTAGATGATTATTGT+TGG - Chr3:19167215-19167234 MsG0380012525.01.T01:intron 35.0%
TAAAAGAGTGAGTGCTAAAG+AGG - Chr3:19170619-19170638 MsG0380012525.01.T01:intron 35.0%
TAAATGCACGTGAAACGTTA+GGG + Chr3:19168956-19168975 None:intergenic 35.0%
TAAGGTTTCGGATAATAGTG+TGG + Chr3:19168098-19168117 None:intergenic 35.0%
TATGTTGGAAATTGCTCTAC+TGG - Chr3:19171291-19171310 MsG0380012525.01.T01:intron 35.0%
TCCCACATCAGATAGAAAAA+TGG + Chr3:19167335-19167354 None:intergenic 35.0%
TCTCTTAATCCATCACATAG+TGG + Chr3:19170287-19170306 None:intergenic 35.0%
TGAAGTAGGTCATGTTGATA+TGG + Chr3:19172224-19172243 None:intergenic 35.0%
TGATACCATCTTAGAAATCG+TGG + Chr3:19166663-19166682 None:intergenic 35.0%
TGATTCGTGAACATAAATGG+TGG + Chr3:19166760-19166779 None:intergenic 35.0%
TGATTGAGCAGAAAAGATTG+GGG - Chr3:19169641-19169660 MsG0380012525.01.T01:intron 35.0%
TGGATTGTTCATGCTCTATA+AGG + Chr3:19167573-19167592 None:intergenic 35.0%
TGGATTTGTGCATTGTCTTA+AGG + Chr3:19167005-19167024 None:intergenic 35.0%
TGTCACTACTACTACAACTT+TGG - Chr3:19168316-19168335 MsG0380012525.01.T01:intron 35.0%
TTCTAACAGCAAACCCTAAT+AGG - Chr3:19167763-19167782 MsG0380012525.01.T01:CDS 35.0%
TTGATCACAGCAATGAAGAA+TGG - Chr3:19172376-19172395 MsG0380012525.01.T01:CDS 35.0%
TTGCTCATTCACTACATCAA+CGG + Chr3:19171671-19171690 None:intergenic 35.0%
! ACATATTTAGAGCATCTTGC+AGG + Chr3:19171276-19171295 None:intergenic 35.0%
! ATCTTTTCTGCTCAATCAAG+AGG + Chr3:19169639-19169658 None:intergenic 35.0%
! ATGGAGGATAATGTTGGTTA+AGG - Chr3:19169280-19169299 MsG0380012525.01.T01:intron 35.0%
! CAACACCAGAATTTTTAACG+TGG - Chr3:19167653-19167672 MsG0380012525.01.T01:intron 35.0%
! GAGCTTCCAAAATCATTTTG+GGG + Chr3:19167488-19167507 None:intergenic 35.0%
! GCAAGATGCTCTAAATATGT+TGG - Chr3:19171276-19171295 MsG0380012525.01.T01:intron 35.0%
! GCTTGATTCGTGAACATAAA+TGG + Chr3:19166763-19166782 None:intergenic 35.0%
! GTCTATTTGGGATACCTATT+AGG + Chr3:19167780-19167799 None:intergenic 35.0%
! TCTTTTCTGCTCAATCAAGA+GGG + Chr3:19169638-19169657 None:intergenic 35.0%
! TGCTATCAGGTTTTCGTTAT+CGG - Chr3:19166729-19166748 MsG0380012525.01.T01:intron 35.0%
! TGGAGGATAATGTTGGTTAA+GGG - Chr3:19169281-19169300 MsG0380012525.01.T01:intron 35.0%
! TTTCCTTTTTGATGAGCCTA+TGG + Chr3:19171785-19171804 None:intergenic 35.0%
!! CTATGTGATGGATTAAGAGA+CGG - Chr3:19170287-19170306 MsG0380012525.01.T01:intron 35.0%
!! CTCCATTTTTCTATCTGATG+TGG - Chr3:19167330-19167349 MsG0380012525.01.T01:intron 35.0%
!! GAAGGAGCATCAAATATAGA+TGG - Chr3:19169434-19169453 MsG0380012525.01.T01:intron 35.0%
!! TATGTGATGGATTAAGAGAC+GGG - Chr3:19170288-19170307 MsG0380012525.01.T01:intron 35.0%
!!! AGCATTTTTTCCTTGTATCC+TGG - Chr3:19169349-19169368 MsG0380012525.01.T01:intron 35.0%
!!! ATTTTTTCCTTGTATCCTGG+TGG - Chr3:19169352-19169371 MsG0380012525.01.T01:intron 35.0%
!!! GAAACCCGTCTCTTTTTTTT+TGG + Chr3:19170399-19170418 None:intergenic 35.0%
!!! GTCTCTTTTTTTTTGGTGGT+CGG + Chr3:19170392-19170411 None:intergenic 35.0%
!!! TTTTTGAGGCATCAAGTCAT+TGG + Chr3:19169015-19169034 None:intergenic 35.0%
ACCATCTTAGAAATCGTGGT+TGG + Chr3:19166659-19166678 None:intergenic 40.0%
ACCTTCACTAAACAACATCC+AGG - Chr3:19169479-19169498 MsG0380012525.01.T01:intron 40.0%
ACTTATGTGGTTGTTCTGTC+AGG + Chr3:19168065-19168084 None:intergenic 40.0%
ACTTTATAAGTGAGAGAGGG+AGG + Chr3:19167303-19167322 None:intergenic 40.0%
ATACCACTAAGGGTTACAAG+GGG - Chr3:19168018-19168037 MsG0380012525.01.T01:CDS 40.0%
ATCCGAAACCTTAAGGCAAT+GGG - Chr3:19168105-19168124 MsG0380012525.01.T01:intron 40.0%
ATCTCTACTTAAGGGAAAGC+AGG + Chr3:19167188-19167207 None:intergenic 40.0%
ATGGTAGCCATTAATGGTGT+AGG + Chr3:19171238-19171257 None:intergenic 40.0%
ATTATCTCCACCAGGATACA+AGG + Chr3:19169362-19169381 None:intergenic 40.0%
CATACAGATTCTCCATCTCA+TGG - Chr3:19169889-19169908 MsG0380012525.01.T01:intron 40.0%
CCAACTACTAACTACGTAGA+AGG + Chr3:19167085-19167104 None:intergenic 40.0%
CCAGAGAAAAGAGATAGAAG+AGG + Chr3:19168380-19168399 None:intergenic 40.0%
CCATTAATGGTGTAGGAAAC+AGG + Chr3:19171231-19171250 None:intergenic 40.0%
CCTGTTTCCTACACCATTAA+TGG - Chr3:19171228-19171247 MsG0380012525.01.T01:intron 40.0%
CCTTCTACGTAGTTAGTAGT+TGG - Chr3:19167082-19167101 MsG0380012525.01.T01:intron 40.0%
CTCCAATATTACCACTGCTA+TGG + Chr3:19169668-19169687 None:intergenic 40.0%
GAAAAGAGATAGAAGAGGGA+AGG + Chr3:19168375-19168394 None:intergenic 40.0%
GAAATGGAACCCACATAAAG+TGG + Chr3:19170567-19170586 None:intergenic 40.0%
GAAGCTCTATACCAGTTGTT+GGG - Chr3:19167501-19167520 MsG0380012525.01.T01:CDS 40.0%
GACCATAGCAGTGGTAATAT+TGG - Chr3:19169663-19169682 MsG0380012525.01.T01:intron 40.0%
GATAACGAAAACCTGATAGC+AGG + Chr3:19166730-19166749 None:intergenic 40.0%
GATACCACTAAGGGTTACAA+GGG - Chr3:19168017-19168036 MsG0380012525.01.T01:CDS 40.0%
GATATCATATACAGAGGGCA+AGG - Chr3:19170713-19170732 MsG0380012525.01.T01:intron 40.0%
GATTGTAGAGCAAAGAGAGA+AGG - Chr3:19167037-19167056 MsG0380012525.01.T01:intron 40.0%
GCATCAAATATAGATGGGAG+AGG - Chr3:19169440-19169459 MsG0380012525.01.T01:intron 40.0%
GCTTCAAGACATTTGGAGAT+AGG - Chr3:19171178-19171197 MsG0380012525.01.T01:intron 40.0%
GGAGAGAACTTAAAATGGAG+AGG + Chr3:19170048-19170067 None:intergenic 40.0%
GGATGAGCATGATGAATTGA+TGG + Chr3:19167405-19167424 None:intergenic 40.0%
GTAAATGCACGTGAAACGTT+AGG + Chr3:19168957-19168976 None:intergenic 40.0%
GTACCATAGGCTCATCAAAA+AGG - Chr3:19171779-19171798 MsG0380012525.01.T01:intron 40.0%
TACACCATTAATGGCTACCA+TGG - Chr3:19171237-19171256 MsG0380012525.01.T01:intron 40.0%
TATCCGAAACCTTAAGGCAA+TGG - Chr3:19168104-19168123 MsG0380012525.01.T01:intron 40.0%
TATGACCCACCACTTTATGT+GGG - Chr3:19170555-19170574 MsG0380012525.01.T01:intron 40.0%
TATTCATCTTCAAGAGCTCG+TGG + Chr3:19170971-19170990 None:intergenic 40.0%
TCCAGTGACAACAGCAAAAA+GGG + Chr3:19168406-19168425 None:intergenic 40.0%
TGATACCACTAAGGGTTACA+AGG - Chr3:19168016-19168035 MsG0380012525.01.T01:CDS 40.0%
TGCTATCAGGTTTCCGTTAT+CGG - Chr3:19166425-19166444 MsG0380012525.01.T01:intron 40.0%
TGCTGCAGCCAAATTGTATA+AGG - Chr3:19171368-19171387 MsG0380012525.01.T01:intron 40.0%
TGCTTGCATATCAGTGAAGT+AGG + Chr3:19172238-19172257 None:intergenic 40.0%
TGGAGATAGGGTTAAGCATT+GGG - Chr3:19171191-19171210 MsG0380012525.01.T01:intron 40.0%
TGGTTCGTGTACATAAAGGT+GGG + Chr3:19166455-19166474 None:intergenic 40.0%
TGTGGCTGAAAAATAGGAAG+TGG + Chr3:19168640-19168659 None:intergenic 40.0%
TTCCAGTGACAACAGCAAAA+AGG + Chr3:19168407-19168426 None:intergenic 40.0%
TTGCTTACATTATCTCCACC+AGG + Chr3:19169370-19169389 None:intergenic 40.0%
TTGGAGATAGGGTTAAGCAT+TGG - Chr3:19171190-19171209 MsG0380012525.01.T01:intron 40.0%
! ACCTGGATGTTGTTTAGTGA+AGG + Chr3:19169483-19169502 None:intergenic 40.0%
! AGAAGGTGTGGCTGAAAAAT+AGG + Chr3:19168646-19168665 None:intergenic 40.0%
! ATTGTTGTTGTTGGCTGTGT+TGG + Chr3:19167601-19167620 None:intergenic 40.0%
! CCTCTTCTATCTCTTTTCTC+TGG - Chr3:19168377-19168396 MsG0380012525.01.T01:intron 40.0%
! CTTCCACCCCAAAATGATTT+TGG - Chr3:19167479-19167498 MsG0380012525.01.T01:CDS 40.0%
! GCTATCAGGTTTTCGTTATC+GGG - Chr3:19166730-19166749 MsG0380012525.01.T01:intron 40.0%
! TATTTAGAGCATCTTGCAGG+TGG + Chr3:19171273-19171292 None:intergenic 40.0%
! TCCAACCACGATTTCTAAGA+TGG - Chr3:19166655-19166674 MsG0380012525.01.T01:CDS 40.0%
! TCTACTTGCAGCTTTGTGAT+CGG + Chr3:19171861-19171880 None:intergenic 40.0%
! TGAGCTTATCTCAGTTGGTA+AGG - Chr3:19170326-19170345 MsG0380012525.01.T01:intron 40.0%
! TGCCACTCGACATTTTTCAT+CGG - Chr3:19171555-19171574 MsG0380012525.01.T01:intron 40.0%
! TGTTGGCTGTGTTGGTAAAT+TGG + Chr3:19167593-19167612 None:intergenic 40.0%
! TTGGTTCGTGTACATAAAGG+TGG + Chr3:19166456-19166475 None:intergenic 40.0%
!! AATTGATGGACTCACACTTG+AGG + Chr3:19167391-19167410 None:intergenic 40.0%
!! ATTGATGGACTCACACTTGA+GGG + Chr3:19167390-19167409 None:intergenic 40.0%
!! CTTCCAAAATCATTTTGGGG+TGG + Chr3:19167485-19167504 None:intergenic 40.0%
!!! AAATCATTTTGGGGTGGAAG+CGG + Chr3:19167479-19167498 None:intergenic 40.0%
!!! ACACGGCCTCATATTTTTTG+AGG + Chr3:19169029-19169048 None:intergenic 40.0%
!!! ACCCGTCTCTTTTTTTTTGG+TGG + Chr3:19170396-19170415 None:intergenic 40.0%
AAAGAGCTTCTACTCGAGGA+GGG + Chr3:19167426-19167445 None:intergenic 45.0%
AAAGCCTCTCCATGATCCAT+TGG - Chr3:19166365-19166384 MsG0380012525.01.T01:CDS 45.0%
AACATGCTCAAGACCGTCAT+TGG - Chr3:19169065-19169084 MsG0380012525.01.T01:intron 45.0%
AACGAAAACCTGATAGCAGG+TGG + Chr3:19166727-19166746 None:intergenic 45.0%
AAGCCTCTCCATGATCCATT+GGG - Chr3:19166366-19166385 MsG0380012525.01.T01:CDS 45.0%
AAGGGAGCAGTCAATCCTAT+GGG - Chr3:19170732-19170751 MsG0380012525.01.T01:intron 45.0%
ACCATTAATGGCTACCATGG+AGG - Chr3:19171240-19171259 MsG0380012525.01.T01:intron 45.0%
ACGAATCAAGCCAATAGTGC+TGG - Chr3:19166772-19166791 MsG0380012525.01.T01:intron 45.0%
AGCCACACCTTCTTGAATTG+TGG - Chr3:19168653-19168672 MsG0380012525.01.T01:intron 45.0%
ATATGTCCCCCATTGCCTTA+AGG + Chr3:19168116-19168135 None:intergenic 45.0%
ATCTGCAGCCATGAAAGCTA+CGG - Chr3:19168347-19168366 MsG0380012525.01.T01:intron 45.0%
ATGGAACCCACATAAAGTGG+TGG + Chr3:19170564-19170583 None:intergenic 45.0%
ATGGGAGAGGACCAAGTATA+TGG - Chr3:19169453-19169472 MsG0380012525.01.T01:intron 45.0%
CATCGGATTCCTAGAGAATG+TGG + Chr3:19169975-19169994 None:intergenic 45.0%
CATCGTGAGCTTATCTCAGT+TGG - Chr3:19170321-19170340 MsG0380012525.01.T01:intron 45.0%
CATGGGAGAATGCACTTCTT+CGG - Chr3:19166979-19166998 MsG0380012525.01.T01:intron 45.0%
CTAACACAACCCCACAAAAC+CGG + Chr3:19166930-19166949 None:intergenic 45.0%
CTCAATCAAGAGGGAAAGAG+AGG + Chr3:19169629-19169648 None:intergenic 45.0%
GATGAAAGAGCTTCTACTCG+AGG + Chr3:19167430-19167449 None:intergenic 45.0%
GCTATCAGGTTTCCGTTATC+GGG - Chr3:19166426-19166445 MsG0380012525.01.T01:intron 45.0%
GGAAGCTCTATACCAGTTGT+TGG - Chr3:19167500-19167519 MsG0380012525.01.T01:CDS 45.0%
GGGTTCCATTTCCAAAGTGT+AGG - Chr3:19170575-19170594 MsG0380012525.01.T01:intron 45.0%
GTAGGTCATGTTGATATGGG+TGG + Chr3:19172220-19172239 None:intergenic 45.0%
GTATGACCCACCACTTTATG+TGG - Chr3:19170554-19170573 MsG0380012525.01.T01:intron 45.0%
GTGTGTTAAGAGTCCCACAT+CGG - Chr3:19166500-19166519 MsG0380012525.01.T01:intron 45.0%
TCAATGTGGGACCTACACTT+TGG + Chr3:19170589-19170608 None:intergenic 45.0%
TCCGAAACCTTAAGGCAATG+GGG - Chr3:19168106-19168125 MsG0380012525.01.T01:intron 45.0%
TCGGCAACACTGTTGGAATA+TGG + Chr3:19171842-19171861 None:intergenic 45.0%
TCTACTTAAGGGAAAGCAGG+TGG + Chr3:19167185-19167204 None:intergenic 45.0%
TGAAGCAGCATAGTGTGACT+TGG + Chr3:19168450-19168469 None:intergenic 45.0%
TGCCACAATTCAAGAAGGTG+TGG + Chr3:19168658-19168677 None:intergenic 45.0%
TGCCGATGAAAAATGTCGAG+TGG + Chr3:19171560-19171579 None:intergenic 45.0%
TGGAACCCACATAAAGTGGT+GGG + Chr3:19170563-19170582 None:intergenic 45.0%
TGGCATCTCTCTCACTTATG+TGG + Chr3:19168078-19168097 None:intergenic 45.0%
TGGGAGAGGACCAAGTATAT+GGG - Chr3:19169454-19169473 MsG0380012525.01.T01:intron 45.0%
TGGGATCAGAGTGTGAAATG+CGG - Chr3:19167520-19167539 MsG0380012525.01.T01:CDS 45.0%
TGGTTGTTCTGTCAGGATGT+GGG + Chr3:19168058-19168077 None:intergenic 45.0%
TTAAGAGTCCCACATCGGAT+AGG - Chr3:19166505-19166524 MsG0380012525.01.T01:intron 45.0%
TTACCGTGTTTGATCGCACA+CGG + Chr3:19169046-19169065 None:intergenic 45.0%
TTCGTGTACATAAAGGTGGG+TGG + Chr3:19166452-19166471 None:intergenic 45.0%
TTTGTGATCGGCAACACTGT+TGG + Chr3:19171849-19171868 None:intergenic 45.0%
! ACCTGAACACTTTTGTCAGG+AGG - Chr3:19167946-19167965 MsG0380012525.01.T01:intron 45.0%
! GACACCTGAACACTTTTGTC+AGG - Chr3:19167943-19167962 MsG0380012525.01.T01:intron 45.0%
! GGCTTGGTTCGTGTACATAA+AGG + Chr3:19166459-19166478 None:intergenic 45.0%
! TCGTGAACATAAATGGTGGG+TGG + Chr3:19166756-19166775 None:intergenic 45.0%
! TGGGACCTACACTTTGGAAA+TGG + Chr3:19170583-19170602 None:intergenic 45.0%
!! GACAAAAGTGTTCAGGTGTC+TGG + Chr3:19167943-19167962 None:intergenic 45.0%
!! GATAACGGAAACCTGATAGC+AGG + Chr3:19166426-19166445 None:intergenic 45.0%
!! GTGAAGGTGTCCCATATACT+TGG + Chr3:19169467-19169486 None:intergenic 45.0%
!! TATCAGGTTGGGCATCCATT+GGG - Chr3:19166397-19166416 MsG0380012525.01.T01:intron 45.0%
!! TCCTCCTGACAAAAGTGTTC+AGG + Chr3:19167950-19167969 None:intergenic 45.0%
!! TTGATGGACTCACACTTGAG+GGG + Chr3:19167389-19167408 None:intergenic 45.0%
!! TTTTGGGAGTCTGTTACCCA+AGG + Chr3:19172107-19172126 None:intergenic 45.0%
!!! ACCCTTTTTGCTGTTGTCAC+TGG - Chr3:19168402-19168421 MsG0380012525.01.T01:intron 45.0%
!! TAGAAAATAATAAATTTAAT+AGG + Chr3:19171065-19171084 None:intergenic 5.0%
!! TTTCATTAATTTATAAAATA+AGG - Chr3:19171937-19171956 MsG0380012525.01.T01:intron 5.0%
!!! ACTAAATTTTTTTATATATA+CGG - Chr3:19170901-19170920 MsG0380012525.01.T01:intron 5.0%
AACGGAAACCTGATAGCAGG+TGG + Chr3:19166423-19166442 None:intergenic 50.0%
AAGATTGGGGACCATAGCAG+TGG - Chr3:19169654-19169673 MsG0380012525.01.T01:intron 50.0%
ACGAACCAAGCCAATAGTGC+TGG - Chr3:19166467-19166486 MsG0380012525.01.T01:intron 50.0%
AGGACATCACCTATCCGATG+TGG + Chr3:19166517-19166536 None:intergenic 50.0%
CAAGGGAGCAGTCAATCCTA+TGG - Chr3:19170731-19170750 MsG0380012525.01.T01:intron 50.0%
CACACTCTGATCCCAACAAC+TGG + Chr3:19167515-19167534 None:intergenic 50.0%
CCCCCATTGCCTTAAGGTTT+CGG + Chr3:19168110-19168129 None:intergenic 50.0%
CCGAAACCTTAAGGCAATGG+GGG - Chr3:19168107-19168126 MsG0380012525.01.T01:intron 50.0%
GAAAGAGCTTCTACTCGAGG+AGG + Chr3:19167427-19167446 None:intergenic 50.0%
GCCTCCATGGTAGCCATTAA+TGG + Chr3:19171244-19171263 None:intergenic 50.0%
GGAAGGATCCGTAGCTTTCA+TGG + Chr3:19168358-19168377 None:intergenic 50.0%
GGACATCACCTATCCGATGT+GGG + Chr3:19166516-19166535 None:intergenic 50.0%
GGTCATGTTGATATGGGTGG+TGG + Chr3:19172217-19172236 None:intergenic 50.0%
GTGGTTGTTCTGTCAGGATG+TGG + Chr3:19168059-19168078 None:intergenic 50.0%
TAAGGGTTACAAGGGGAGCT+CGG - Chr3:19168025-19168044 MsG0380012525.01.T01:CDS 50.0%
TCGAATCCTTCGTCGAACCT+CGG - Chr3:19167990-19168009 MsG0380012525.01.T01:CDS 50.0%
TGGTTCCGTTGTGAGGGAAA+CGG + Chr3:19167923-19167942 None:intergenic 50.0%
TTGTTCTGTCAGGATGTGGG+TGG + Chr3:19168055-19168074 None:intergenic 50.0%
! CTCGGCTCTGATACCACTAA+GGG - Chr3:19168008-19168027 MsG0380012525.01.T01:CDS 50.0%
! TGTTGCCGTTTCCCTCACAA+CGG - Chr3:19167915-19167934 MsG0380012525.01.T01:intron 50.0%
!! ACCTCACAAGCCGGTTTTGT+GGG - Chr3:19166917-19166936 MsG0380012525.01.T01:CDS 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG - Chr3:19166928-19166947 MsG0380012525.01.T01:CDS 50.0%
!! CTATCAGGTTGGGCATCCAT+TGG - Chr3:19166396-19166415 MsG0380012525.01.T01:intron 50.0%
!! GAGGGCGTTTACCATTTGCT+AGG + Chr3:19170791-19170810 None:intergenic 50.0%
!! TGATGGACTCACACTTGAGG+GGG + Chr3:19167388-19167407 None:intergenic 50.0%
!! TGGTGTAGCTATTGGCTCCT+CGG - Chr3:19172396-19172415 MsG0380012525.01.T01:CDS 50.0%
AAAGGTGGGTGGCCCGATAA+CGG + Chr3:19166441-19166460 None:intergenic 55.0%
AACCTGATAGCAGGGCCCAA+TGG + Chr3:19166701-19166720 None:intergenic 55.0%
ACTCACACTTGAGGGGGAGA+TGG + Chr3:19167382-19167401 None:intergenic 55.0%
AGGCCGTGTGCGATCAAACA+CGG - Chr3:19169040-19169059 MsG0380012525.01.T01:intron 55.0%
ATCCATTGGGCCCTGCTATC+AGG - Chr3:19166696-19166715 MsG0380012525.01.T01:CDS 55.0%
ATGCCCAACCTGATAGCAGG+TGG + Chr3:19166392-19166411 None:intergenic 55.0%
ATTGGGCCCTGCTATCAGGT+TGG - Chr3:19166700-19166719 MsG0380012525.01.T01:CDS 55.0%
CCTTAGTGGTATCAGAGCCG+AGG + Chr3:19168010-19168029 None:intergenic 55.0%
CTCCAACCACGATTCGTGAG+GGG - Chr3:19166565-19166584 MsG0380012525.01.T01:intron 55.0%
CTCCTCACGACCAGCACTAT+TGG + Chr3:19166480-19166499 None:intergenic 55.0%
GCAATCCTCACCTCACAAGC+CGG - Chr3:19166908-19166927 MsG0380012525.01.T01:CDS 55.0%
GCTCCAACCACGATTCGTGA+GGG - Chr3:19166564-19166583 MsG0380012525.01.T01:intron 55.0%
GCTCCCCTTGTAACCCTTAG+TGG + Chr3:19168024-19168043 None:intergenic 55.0%
GGTTCGACGAAGGATTCGAC+CGG + Chr3:19167989-19168008 None:intergenic 55.0%
TAGCAGGGCCCAATGGATCA+TGG + Chr3:19166694-19166713 None:intergenic 55.0%
TCAGGAGGACTTTCGACGCA+AGG - Chr3:19167961-19167980 MsG0380012525.01.T01:intron 55.0%
TCCAACCACGATTCGTGAGG+GGG - Chr3:19166566-19166585 MsG0380012525.01.T01:intron 55.0%
TGGATGCCCAACCTGATAGC+AGG + Chr3:19166395-19166414 None:intergenic 55.0%
TGGCCCAATGGATCATGGAG+AGG + Chr3:19166372-19166391 None:intergenic 55.0%
TGTGAGGGAAACGGCAACAG+CGG + Chr3:19167914-19167933 None:intergenic 55.0%
TTGGGCCCTGCTATCAGGTT+GGG - Chr3:19166701-19166720 MsG0380012525.01.T01:CDS 55.0%
! AGGTGTCTGGTTCCGTTGTG+AGG + Chr3:19167930-19167949 None:intergenic 55.0%
! CACGACCAGCACTATTGGCT+TGG + Chr3:19166475-19166494 None:intergenic 55.0%
! CCTCGGCTCTGATACCACTA+AGG - Chr3:19168007-19168026 MsG0380012525.01.T01:CDS 55.0%
! GGTGTCTGGTTCCGTTGTGA+GGG + Chr3:19167929-19167948 None:intergenic 55.0%
! GTGGTACACGGAAGTGTGTG+CGG + Chr3:19167452-19167471 None:intergenic 55.0%
!! AGCCAATAGTGCTGGTCGTG+AGG - Chr3:19166475-19166494 MsG0380012525.01.T01:intron 55.0%
!! CAAAACCGGCTTGTGAGGTG+AGG + Chr3:19166916-19166935 None:intergenic 55.0%
!! CAATAGTGCTGGTCGTGAGG+AGG - Chr3:19166478-19166497 MsG0380012525.01.T01:intron 55.0%
!! CAATAGTGCTGGTCGTGAGG+GGG - Chr3:19166478-19166497 MsG0380012525.01.T01:intron 55.0%
!! CACCTCACAAGCCGGTTTTG+TGG - Chr3:19166916-19166935 MsG0380012525.01.T01:CDS 55.0%
!! CCAATAGTGCTGGTCGTGAG+GGG - Chr3:19166477-19166496 MsG0380012525.01.T01:intron 55.0%
!! CCTCACAAGCCGGTTTTGTG+GGG - Chr3:19166918-19166937 MsG0380012525.01.T01:CDS 55.0%
!! GCCAATAGTGCTGGTCGTGA+GGG - Chr3:19166476-19166495 MsG0380012525.01.T01:intron 55.0%
ACACACCCCCTCACGAATCG+TGG + Chr3:19166574-19166593 None:intergenic 60.0%
ACCCCCTCACGAATCGTGGT+TGG + Chr3:19166570-19166589 None:intergenic 60.0%
AGGTGGCCCAACCTGATAGC+AGG + Chr3:19166710-19166729 None:intergenic 60.0%
AGGTTGGGCCACCTGCTATC+AGG - Chr3:19166716-19166735 MsG0380012525.01.T01:intron 60.0%
CCATTGGGCCACCTGCTATC+AGG - Chr3:19166381-19166400 MsG0380012525.01.T01:intron 60.0%
CCCCTCACGACCAGCACTAT+TGG + Chr3:19166785-19166804 None:intergenic 60.0%
CCTGATAGCAGGTGGCCCAA+TGG + Chr3:19166384-19166403 None:intergenic 60.0%
GCAGGTGGCCCAATGGATCA+TGG + Chr3:19166377-19166396 None:intergenic 60.0%
GGAAGCGGCAACGTGGTACA+CGG + Chr3:19167464-19167483 None:intergenic 60.0%
GGACTTTCGACGCAAGGAGC+CGG - Chr3:19167967-19167986 MsG0380012525.01.T01:intron 60.0%
GGCTCCAACCACGATTCGTG+AGG - Chr3:19166563-19166582 MsG0380012525.01.T01:intron 60.0%
GGGCCACCTGCTATCAGGTT+GGG - Chr3:19166386-19166405 MsG0380012525.01.T01:intron 60.0%
GGGCCCAATGGATCATGGAG+AGG + Chr3:19166689-19166708 None:intergenic 60.0%
GGTGGCCCAACCTGATAGCA+GGG + Chr3:19166709-19166728 None:intergenic 60.0%
TCAGAGCCGAGGTTCGACGA+AGG + Chr3:19167999-19168018 None:intergenic 60.0%
TGGGCCACCTGCTATCAGGT+TGG - Chr3:19166385-19166404 MsG0380012525.01.T01:intron 60.0%
!! CAGGTGGAGAAGTGCCTCCA+TGG + Chr3:19171257-19171276 None:intergenic 60.0%
!! CCCCACAAAACCGGCTTGTG+AGG + Chr3:19166921-19166940 None:intergenic 60.0%
GGGTTACAAGGGGAGCTCGG+AGG - Chr3:19168028-19168047 MsG0380012525.01.T01:CDS 65.0%
GGTGGTCGGAGTTCGAACCC+CGG + Chr3:19170378-19170397 None:intergenic 65.0%
TTGGGGTGGAAGCGGCAACG+TGG + Chr3:19167471-19167490 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 19166357 19172423 19166357 ID=MsG0380012525.01;Name=MsG0380012525.01
Chr3 mRNA 19166357 19172423 19166357 ID=MsG0380012525.01.T01;Parent=MsG0380012525.01;Name=MsG0380012525.01.T01;_AED=0.49;_eAED=0.61;_QI=0|0.42|0.25|1|0.85|0.75|8|0|300
Chr3 exon 19172289 19172423 19172289 ID=MsG0380012525.01.T01:exon:3989;Parent=MsG0380012525.01.T01
Chr3 exon 19171984 19172062 19171984 ID=MsG0380012525.01.T01:exon:3990;Parent=MsG0380012525.01.T01
Chr3 exon 19167982 19168053 19167982 ID=MsG0380012525.01.T01:exon:3991;Parent=MsG0380012525.01.T01
Chr3 exon 19167763 19167850 19167763 ID=MsG0380012525.01.T01:exon:3992;Parent=MsG0380012525.01.T01
Chr3 exon 19167379 19167631 19167379 ID=MsG0380012525.01.T01:exon:3993;Parent=MsG0380012525.01.T01
Chr3 exon 19166877 19166992 19166877 ID=MsG0380012525.01.T01:exon:3994;Parent=MsG0380012525.01.T01
Chr3 exon 19166605 19166726 19166605 ID=MsG0380012525.01.T01:exon:3995;Parent=MsG0380012525.01.T01
Chr3 exon 19166357 19166394 19166357 ID=MsG0380012525.01.T01:exon:3996;Parent=MsG0380012525.01.T01
Chr3 CDS 19172289 19172423 19172289 ID=MsG0380012525.01.T01:cds;Parent=MsG0380012525.01.T01
Chr3 CDS 19171984 19172062 19171984 ID=MsG0380012525.01.T01:cds;Parent=MsG0380012525.01.T01
Chr3 CDS 19167982 19168053 19167982 ID=MsG0380012525.01.T01:cds;Parent=MsG0380012525.01.T01
Chr3 CDS 19167763 19167850 19167763 ID=MsG0380012525.01.T01:cds;Parent=MsG0380012525.01.T01
Chr3 CDS 19167379 19167631 19167379 ID=MsG0380012525.01.T01:cds;Parent=MsG0380012525.01.T01
Chr3 CDS 19166877 19166992 19166877 ID=MsG0380012525.01.T01:cds;Parent=MsG0380012525.01.T01
Chr3 CDS 19166605 19166726 19166605 ID=MsG0380012525.01.T01:cds;Parent=MsG0380012525.01.T01
Chr3 CDS 19166357 19166394 19166357 ID=MsG0380012525.01.T01:cds;Parent=MsG0380012525.01.T01
Gene Sequence

>MsG0380012525.01.T01

ATGGTATCAAAGCCTCTCCATGATCCATTGGGCCACCTGCTATCAGGTTGGGCATCCATTGGGCCACCTGCTATCAGGTTTCCGTTATCGGGCCACCCACCTTTATGTACACGAACCAAGCCAATAGTGCTGGTCGTTGGGCCACCTGCTATCAGGTTTTCGTTATCGGGCCACCCACCATTTATGTTCACGAATCAAGCCAATAGTGCTGGTCAGGGCAAGGGAGCAGTCAATCCTATGGGAGTTAAATTCTACAATAATGTCATTAATGAGGTCCTAGCAAATGGCTTGATACCCTTTGTAACATTGTTTCATTGGGATCTTCCACGAGCTCTTGAAGATGAATATAAGGGATTTCTAAGTCTTAAAGTAGTGAAGGATTTTGAAGCCTATGCTGATTTTTGCTTCAAGACATTTGGAGATAGGGTTAAGCATTGGGTGACACTTAATGAGCCTGTTTCCTACACCATTAATGGCTACCATGGAGGCACTTCTCCACCTGCAAGATGCTCTAAATATGTTGGAAATTGCTCTACTGGTGACTCAACTACAGAACCCTACATTGTTGCTCATCACTTTATACTTTCTCATGCTGCTGCAGCCAAATTGTATAAGGCCAAATATCAGGCTCATCAAAAAGGAAAAATTGGAATTACCTTGATTACTCACTACTATGAACCATATTCCAACAGTGTTGCCGATCACAAAGCTGCAAGTAGAGCACTTGACTTTTTATTTGGATGGTTTGCTCATCCAATTACATATGGTCACTATCCCCAATCAATAATATTATCCTTGGGTAACAGACTCCCAAAATTCACAAAAGAAGAATCTAAAATTATCAAAGGTTCCTATGATTTTCTTGCAATGAAGAATGGTGTAGCTATTGGCTCCTCGGTATGA
Protein sequence

>MsG0380012525.01.T01

MVSKPLHDPLGHLLSGWASIGPPAIRFPLSGHPPLCTRTKPIVLVVGPPAIRFSLSGHPPFMFTNQANSAGQGKGAVNPMGVKFYNNVINEVLANGLIPFVTLFHWDLPRALEDEYKGFLSLKVVKDFEAYADFCFKTFGDRVKHWVTLNEPVSYTINGYHGGTSPPARCSKYVGNCSTGDSTTEPYIVAHHFILSHAAAAKLYKAKYQAHQKGKIGITLITHYYEPYSNSVADHKAASRALDFLFGWFAHPITYGHYPQSIILSLGNRLPKFTKEESKIIKGSYDFLAMKNGVAIGSSV*