AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012626.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012626.01.T01 MTR_3g028170 84.500 200 13 3 127 325 279 461 1.32e-99 303
MsG0380012626.01.T01 MTR_3g028170 78.014 141 25 2 5 145 4 138 2.53e-54 185
MsG0380012626.01.T01 MTR_3g028190 45.349 86 40 2 6 84 6 91 4.29e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 78 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCAAGAGGCCATGGTTTC+TGG 0.092914 3:+21475501 MsG0380012626.01.T01:CDS
TTAAATTTATGAATTGTTTC+AGG 0.192998 3:+21471091 None:intergenic
GTTTCTGGGATAGATGATTT+TGG 0.250360 3:+21475516 MsG0380012626.01.T01:CDS
CAGAAAGGGTCTTGTGCTTA+TGG 0.259648 3:+21471463 MsG0380012626.01.T01:CDS
GATTCGCTGGCTGGCGGTTC+AGG 0.263297 3:+21475315 MsG0380012626.01.T01:CDS
GTGCTAAAGTAGCATCAAAT+TGG 0.277566 3:+21471575 MsG0380012626.01.T01:CDS
AGCATCATCTTCGGCATCTA+TGG 0.290013 3:+21471522 MsG0380012626.01.T01:CDS
GCTCTTGGGATGGATGCTTT+TGG 0.301364 3:+21475420 MsG0380012626.01.T01:CDS
TGGCGGTTCAGGTCCTTGTT+TGG 0.314287 3:+21475326 MsG0380012626.01.T01:CDS
GGCGGTTCAGGTCCTTGTTT+GGG 0.319796 3:+21475327 MsG0380012626.01.T01:CDS
TCGTCATCGTCATCGTCATC+AGG 0.347305 3:-21475444 None:intergenic
ATGCAAGAGGCCATGGCTCT+TGG 0.356930 3:+21475405 MsG0380012626.01.T01:CDS
GGAAATGGAAATTGTCCATT+GGG 0.392717 3:+21472311 MsG0380012626.01.T01:CDS
CCTCACAAGCGCGGTGTAAA+GGG 0.399134 3:+21471625 MsG0380012626.01.T01:CDS
TGCAAGAGGCCATGGTTTCT+GGG 0.408782 3:+21475502 MsG0380012626.01.T01:CDS
TGCAAGAGGCCATGGCTCTT+GGG 0.417374 3:+21475406 MsG0380012626.01.T01:CDS
AATGATGATGCATTCTCATA+TGG 0.418914 3:+21475587 MsG0380012626.01.T01:CDS
TCAATTCCATGAAAATCATC+AGG 0.425647 3:-21475540 None:intergenic
TAAATTTATGAATTGTTTCA+GGG 0.435260 3:+21471092 None:intergenic
ACCTCACAAGCGCGGTGTAA+AGG 0.435669 3:+21471624 MsG0380012626.01.T01:CDS
GATAATGCCATCATCTCAAA+TGG 0.443626 3:-21475291 None:intergenic
GATTCAGACGATGAGGATGA+TGG 0.450779 3:+21475357 MsG0380012626.01.T01:CDS
CTACGAGCCACAGGCGCAGC+AGG 0.454219 3:-21471553 None:intergenic
ACATGTCATGCATATCGAAA+TGG 0.462288 3:-21475185 None:intergenic
TGCTGCTATGCAAGAGGCCA+TGG 0.469668 3:+21475398 MsG0380012626.01.T01:CDS
TTTGCGTCTTATTATCAGAA+AGG 0.472054 3:+21471448 MsG0380012626.01.T01:CDS
GGGTTTACAACGCAAGCATC+AGG 0.478209 3:+21471645 MsG0380012626.01.T01:CDS
TTGCGTCTTATTATCAGAAA+GGG 0.484181 3:+21471449 MsG0380012626.01.T01:CDS
AGCTTCTCAAGCATCATCTT+CGG 0.487586 3:+21471513 MsG0380012626.01.T01:CDS
GCATTATCAGATTCGCTGGC+TGG 0.489570 3:+21475306 MsG0380012626.01.T01:CDS
TGCTAAAGTAGCATCAAATT+GGG 0.490703 3:+21471576 MsG0380012626.01.T01:CDS
AATGGATCCATTTGAGATGA+TGG 0.491467 3:+21475284 MsG0380012626.01.T01:CDS
TGGAAATGGAAATTGTCCAT+TGG 0.493452 3:+21472310 MsG0380012626.01.T01:CDS
GGCTGCTATGCAAGAGGCCA+TGG 0.495488 3:+21475494 MsG0380012626.01.T01:CDS
TGGTCTAGCACTACCAGTAC+TGG 0.497170 3:-21471689 None:intergenic
TGTCTCCATGTGTATGAGCC+AGG 0.499940 3:-21475132 None:intergenic
TCCTCATCGTCTGAATCAAA+AGG 0.507460 3:-21475351 None:intergenic
GAAGGAACCTTTGTAACCTT+CGG 0.509713 3:-21471601 None:intergenic
GATGGCATTATCAGATTCGC+TGG 0.519486 3:+21475302 MsG0380012626.01.T01:CDS
TTCAGATCCTGCTGCGCCTG+TGG 0.523317 3:+21471546 MsG0380012626.01.T01:CDS
CCCTTTACACCGCGCTTGTG+AGG 0.526229 3:-21471625 None:intergenic
TGGGGCTAGCTGTTTCTACA+AGG 0.532224 3:+21472330 MsG0380012626.01.T01:CDS
AAAATCTGAGTCCCTCATGA+TGG 0.533480 3:-21475253 None:intergenic
ATTCAGACGATGAGGATGAT+GGG 0.536703 3:+21475358 MsG0380012626.01.T01:CDS
GCGCGAGGCGTATGTTTGAA+AGG 0.542739 3:+21471129 MsG0380012626.01.T01:CDS
TTTCAGCATACAGTGAAGCC+TGG 0.555178 3:+21475114 MsG0380012626.01.T01:CDS
GATATCAAAGCTGCATCCAT+AGG 0.558891 3:-21475564 None:intergenic
TCAAATTGCTGCTATGCAAG+AGG 0.561508 3:+21475392 MsG0380012626.01.T01:CDS
CATCAGGACTCTACCGATGT+TGG 0.562367 3:+21471661 MsG0380012626.01.T01:CDS
GATGTTGGTGAATCCAGTAC+TGG 0.570914 3:+21471676 MsG0380012626.01.T01:CDS
AGCATCAAATTGGGTTCCGA+AGG 0.575611 3:+21471585 MsG0380012626.01.T01:CDS
TGCGTTGAGGTGGTGGCCTG+CGG 0.577755 3:-21475155 None:intergenic
TTTCGATATGCATGACATGT+TGG 0.582133 3:+21475188 MsG0380012626.01.T01:CDS
TCGAATGGCTGCTATGCAAG+AGG 0.583412 3:+21475488 MsG0380012626.01.T01:CDS
AGAGGCCATGGCTCTTGGGA+TGG 0.587677 3:+21475410 MsG0380012626.01.T01:CDS
GGTCTTGTGCTTATGGTAGT+CGG 0.588927 3:+21471470 MsG0380012626.01.T01:CDS
GTAGAAACAGCTAGCCCCAA+TGG 0.589148 3:-21472326 None:intergenic
TTGGGTTCCGAAGGTTACAA+AGG 0.589756 3:+21471594 MsG0380012626.01.T01:CDS
ACACCGCGCTTGTGAGGTGA+AGG 0.593590 3:-21471619 None:intergenic
AGCATCCATCCCAAGAGCCA+TGG 0.600499 3:-21475415 None:intergenic
ATCATCTATCCCAGAAACCA+TGG 0.600753 3:-21475511 None:intergenic
CGTCATCGTCATCGTCATCA+GGG 0.603521 3:-21475443 None:intergenic
ACTTTAGCACTACGAGCCAC+AGG 0.603612 3:-21471562 None:intergenic
TTATCAGATTCGCTGGCTGG+CGG 0.606192 3:+21475309 MsG0380012626.01.T01:CDS
TGAAGCCTGGCTCATACACA+TGG 0.611090 3:+21475127 MsG0380012626.01.T01:CDS
AAGATGATGCTTGAGAAGCT+CGG 0.614458 3:-21471510 None:intergenic
CATGACATGTTGGATGTGCT+CGG 0.619477 3:+21475198 MsG0380012626.01.T01:CDS
GAATCAAAAGGACCCAAACA+AGG 0.628395 3:-21475339 None:intergenic
ATTTACAAAACAAATTCATG+TGG 0.629345 3:-21471709 None:intergenic
GGTGAGGTTGATCTATCAAG+TGG 0.638628 3:+21475219 MsG0380012626.01.T01:CDS
CATACACATGGAGACACCGC+AGG 0.651112 3:+21475139 MsG0380012626.01.T01:CDS
CAATTCCATGAAAATCATCA+GGG 0.655793 3:-21475539 None:intergenic
AGTACTGGATTCACCAACAT+CGG 0.669244 3:-21471674 None:intergenic
GTTCCTTCACCTCACAAGCG+CGG 0.680704 3:+21471616 MsG0380012626.01.T01:CDS
TGACGATGACGATGACGATG+AGG 0.681637 3:+21475449 MsG0380012626.01.T01:CDS
AGAAGAAGATGAAGATTACG+AGG 0.692698 3:+21475617 MsG0380012626.01.T01:CDS
CATGTTGGATGTGCTCGGTG+AGG 0.698239 3:+21475203 MsG0380012626.01.T01:CDS
GAAATGGAAATTGTCCATTG+GGG 0.736343 3:+21472312 MsG0380012626.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAAAATTTAATTAAAA+GGG + Chr3:21474891-21474910 MsG0380012626.01.T01:intron 0.0%
!! TTTATAAAAATTTAATTAAA+AGG + Chr3:21474890-21474909 MsG0380012626.01.T01:intron 0.0%
!! AATGCTATTACAATATTAAA+CGG - Chr3:21474006-21474025 None:intergenic 15.0%
!! ATTTCAGATTAAAATAATAC+TGG + Chr3:21473938-21473957 MsG0380012626.01.T01:intron 15.0%
!! TCTCAAAAACTAATATAAAA+TGG - Chr3:21475052-21475071 None:intergenic 15.0%
!!! AGTTTACATTTTTTTTTTAC+CGG + Chr3:21472824-21472843 MsG0380012626.01.T01:intron 15.0%
!!! GTATTATTTTAATCTGAAAT+TGG - Chr3:21473938-21473957 None:intergenic 15.0%
!!! TTTTAGAAAAAAATTACCAA+GGG - Chr3:21474864-21474883 None:intergenic 15.0%
!!! TTTTATATTAGTTTTTGAGA+TGG + Chr3:21475052-21475071 MsG0380012626.01.T01:intron 15.0%
!! AAACATATTTCAAAAATGGA+GGG - Chr3:21473277-21473296 None:intergenic 20.0%
!! AACATCAAAATTATCTTCAA+AGG + Chr3:21473756-21473775 MsG0380012626.01.T01:intron 20.0%
!! AATACAAGTAAAAAACACAT+TGG - Chr3:21471392-21471411 None:intergenic 20.0%
!! AGAAAATATTATTAAGTCAG+TGG + Chr3:21474039-21474058 MsG0380012626.01.T01:intron 20.0%
!! ATCACGAATATAAATCATAT+TGG - Chr3:21473406-21473425 None:intergenic 20.0%
!! ATTAAAATAATACTGGTAGT+GGG + Chr3:21473945-21473964 MsG0380012626.01.T01:intron 20.0%
!! ATTTACAAAACAAATTCATG+TGG - Chr3:21471712-21471731 None:intergenic 20.0%
!! CCTAAAATACTATGAAATAT+CGG + Chr3:21474961-21474980 MsG0380012626.01.T01:intron 20.0%
!! CTAAAATACTATGAAATATC+GGG + Chr3:21474962-21474981 MsG0380012626.01.T01:intron 20.0%
!! CTTGTATTTATATTGTTCTA+TGG + Chr3:21471404-21471423 MsG0380012626.01.T01:intron 20.0%
!! GAAAATTGTATAACTATCAT+AGG + Chr3:21472719-21472738 MsG0380012626.01.T01:intron 20.0%
!! GATCAAACATATTTCAAAAA+TGG - Chr3:21473281-21473300 None:intergenic 20.0%
!! GTAAATGTAAATATTGTCTT+TGG + Chr3:21475014-21475033 MsG0380012626.01.T01:intron 20.0%
!! TAATATAAAATGGATATGCA+AGG - Chr3:21475042-21475061 None:intergenic 20.0%
!!! AGATAATTTTGATGTTTCTT+TGG - Chr3:21473752-21473771 None:intergenic 20.0%
!!! AGCACATATATTTTTTCAAA+GGG + Chr3:21474263-21474282 MsG0380012626.01.T01:intron 20.0%
!!! ATATTTCTAAACTATCTTGT+TGG - Chr3:21474592-21474611 None:intergenic 20.0%
!!! CAAGTTCTTTTACAAATTTT+AGG - Chr3:21472775-21472794 None:intergenic 20.0%
!!! GTTTACATTTTTTTTTTACC+GGG + Chr3:21472825-21472844 MsG0380012626.01.T01:intron 20.0%
!!! GTTTTAGAAAAAAATTACCA+AGG - Chr3:21474865-21474884 None:intergenic 20.0%
!!! TGTAATAGCATTCTTTATTT+TGG + Chr3:21474014-21474033 MsG0380012626.01.T01:intron 20.0%
!!! TTTACATTTTTTTTTTACCG+GGG + Chr3:21472826-21472845 MsG0380012626.01.T01:intron 20.0%
!!! TTTAGATTTGTTTCTCTTTT+AGG + Chr3:21475075-21475094 MsG0380012626.01.T01:intron 20.0%
! AATTATTAAGCGTGAATGTT+TGG + Chr3:21472219-21472238 MsG0380012626.01.T01:intron 25.0%
! ACTAGTATTTAGTGGTTTAT+AGG - Chr3:21473337-21473356 None:intergenic 25.0%
! AGAACTAATCTAACAAAGAA+AGG - Chr3:21472481-21472500 None:intergenic 25.0%
! AGGAAAAAGAAAATCATTTG+AGG + Chr3:21471825-21471844 MsG0380012626.01.T01:intron 25.0%
! ATAATTTATCCGTGACTATA+TGG - Chr3:21472514-21472533 None:intergenic 25.0%
! ATACATTATTGGAATAATGC+TGG + Chr3:21473903-21473922 MsG0380012626.01.T01:intron 25.0%
! ATATTATTAAGTCAGTGGTT+AGG + Chr3:21474044-21474063 MsG0380012626.01.T01:intron 25.0%
! ATGCTGTGGAAATTAAATAT+GGG - Chr3:21473106-21473125 None:intergenic 25.0%
! ATGTATTACTAGTAACCTAT+AGG - Chr3:21473889-21473908 None:intergenic 25.0%
! ATTGATCAACTAGTATTTAG+TGG - Chr3:21473345-21473364 None:intergenic 25.0%
! ATTGGCATTTATTGAAAGAA+AGG - Chr3:21472625-21472644 None:intergenic 25.0%
! CAAACATATTTCAAAAATGG+AGG - Chr3:21473278-21473297 None:intergenic 25.0%
! CAAATCAATGATTAGGATTA+AGG + Chr3:21473574-21473593 MsG0380012626.01.T01:intron 25.0%
! CAAATTTCAACATTCTGTAT+TGG - Chr3:21472643-21472662 None:intergenic 25.0%
! CAATCTCATCTAAAAAACTA+AGG + Chr3:21473674-21473693 MsG0380012626.01.T01:intron 25.0%
! CCTGAAAGGAAAAAAAAAAT+AGG - Chr3:21472264-21472283 None:intergenic 25.0%
! GATCTATAGATCTAGTAAAA+TGG - Chr3:21473078-21473097 None:intergenic 25.0%
! GATTAAAATAATACTGGTAG+TGG + Chr3:21473944-21473963 MsG0380012626.01.T01:intron 25.0%
! GGTTACTAGTAATACATTAT+TGG + Chr3:21473892-21473911 MsG0380012626.01.T01:intron 25.0%
! TAACAAAGAAAGGAAAATCA+CGG - Chr3:21472471-21472490 None:intergenic 25.0%
! TACTACTACTTGTCTTTAAT+TGG + Chr3:21473003-21473022 MsG0380012626.01.T01:intron 25.0%
! TATAGTCAACCAAAATTTGT+AGG + Chr3:21473857-21473876 MsG0380012626.01.T01:intron 25.0%
! TGTATTACTAGTAACCTATA+GGG - Chr3:21473888-21473907 None:intergenic 25.0%
! TTAAAAGGGGAAAACAAATT+AGG + Chr3:21474905-21474924 MsG0380012626.01.T01:intron 25.0%
! TTTGATGTTTCTTTGGATTT+GGG - Chr3:21473745-21473764 None:intergenic 25.0%
!! AGAATTTTATTCCATCATGA+GGG + Chr3:21475242-21475261 MsG0380012626.01.T01:CDS 25.0%
!! CCGATATTTCATAGTATTTT+AGG - Chr3:21474964-21474983 None:intergenic 25.0%
!! CTTAATCCTAATCATTGATT+TGG - Chr3:21473576-21473595 None:intergenic 25.0%
!! GGAAATTATTGATAACTACA+AGG + Chr3:21472148-21472167 MsG0380012626.01.T01:intron 25.0%
!! GTTATACAATTTTCACACAA+TGG - Chr3:21472713-21472732 None:intergenic 25.0%
!! TACAAAGTTATGATTTTGTC+AGG - Chr3:21474752-21474771 None:intergenic 25.0%
!! TCTTTTTCCTTTTTATCAGT+AGG - Chr3:21471815-21471834 None:intergenic 25.0%
!! TGTTTATTACGTAGTGTTTT+TGG + Chr3:21474546-21474565 MsG0380012626.01.T01:intron 25.0%
!! TTTTGATGTTTCTTTGGATT+TGG - Chr3:21473746-21473765 None:intergenic 25.0%
!!! ACAAATTTTGGTTGACTATA+GGG - Chr3:21473857-21473876 None:intergenic 25.0%
!!! AGAGTTTAATGTTTTTCGAA+TGG + Chr3:21475473-21475492 MsG0380012626.01.T01:CDS 25.0%
!!! ATTTTTTTGTCTCATGTAGT+AGG + Chr3:21472936-21472955 MsG0380012626.01.T01:intron 25.0%
!!! CCTATTTTTTTTTTCCTTTC+AGG + Chr3:21472261-21472280 MsG0380012626.01.T01:intron 25.0%
!!! GAGCACATATATTTTTTCAA+AGG + Chr3:21474262-21474281 MsG0380012626.01.T01:intron 25.0%
!!! TACAAATTTTGGTTGACTAT+AGG - Chr3:21473858-21473877 None:intergenic 25.0%
AACAACATCTACAAGGATTT+GGG - Chr3:21472545-21472564 None:intergenic 30.0%
AACAGAAAAAAGACCAAAGA+GGG + Chr3:21474362-21474381 MsG0380012626.01.T01:intron 30.0%
AGAAGTAGTTTCTTCAATCT+TGG + Chr3:21473183-21473202 MsG0380012626.01.T01:intron 30.0%
AGATTGAAGAAACTACTTCT+AGG - Chr3:21473183-21473202 None:intergenic 30.0%
ATAAGTCAACAACATCTACA+AGG - Chr3:21472552-21472571 None:intergenic 30.0%
ATGATAGAATAGTGTGTAAG+TGG - Chr3:21473653-21473672 None:intergenic 30.0%
ATTCAAAAGCTCAAACAGAT+TGG - Chr3:21473159-21473178 None:intergenic 30.0%
CAATGTCCAAATCAATGATT+AGG + Chr3:21473567-21473586 MsG0380012626.01.T01:intron 30.0%
CAATTCCATGAAAATCATCA+GGG - Chr3:21475542-21475561 None:intergenic 30.0%
CACTACGTAATAAACACAAT+AGG - Chr3:21474542-21474561 None:intergenic 30.0%
CTCTGATGAAAAAATCACAT+TGG - Chr3:21471158-21471177 None:intergenic 30.0%
GATGCTGTGGAAATTAAATA+TGG - Chr3:21473107-21473126 None:intergenic 30.0%
GTGGTATTTGTTTACTACAA+AGG + Chr3:21472116-21472135 MsG0380012626.01.T01:intron 30.0%
TCAACCAAAATTTGTAGGTA+TGG + Chr3:21473862-21473881 MsG0380012626.01.T01:intron 30.0%
TCAATTCCATGAAAATCATC+AGG - Chr3:21475543-21475562 None:intergenic 30.0%
TGACAAAATATGACAGTTTG+CGG - Chr3:21472090-21472109 None:intergenic 30.0%
TGCTAAAGTAGCATCAAATT+GGG + Chr3:21471576-21471595 MsG0380012626.01.T01:CDS 30.0%
TGCTGTGGAAATTAAATATG+GGG - Chr3:21473105-21473124 None:intergenic 30.0%
TGGAAACAAGTACTATCATA+TGG + Chr3:21474292-21474311 MsG0380012626.01.T01:intron 30.0%
TGTAGTAAACAAATACCACT+TGG - Chr3:21472115-21472134 None:intergenic 30.0%
TGTCATAAAGAATAAACTGC+TGG - Chr3:21472685-21472704 None:intergenic 30.0%
TTACTACAAAGGAAGAAAAC+AGG + Chr3:21472127-21472146 MsG0380012626.01.T01:intron 30.0%
TTAGGTTATGGTAGTTTCTA+GGG + Chr3:21474062-21474081 MsG0380012626.01.T01:intron 30.0%
TTCAAAAGCTCAAACAGATT+GGG - Chr3:21473158-21473177 None:intergenic 30.0%
! AAAGTTATGATTTTGTCAGG+TGG - Chr3:21474749-21474768 None:intergenic 30.0%
! AATGATGATGCATTCTCATA+TGG + Chr3:21475587-21475606 MsG0380012626.01.T01:CDS 30.0%
! ACTTTTGAACATAGACACTA+AGG - Chr3:21474931-21474950 None:intergenic 30.0%
! GAGAATTTTATTCCATCATG+AGG + Chr3:21475241-21475260 MsG0380012626.01.T01:CDS 30.0%
! GCTTTCTTTTATAGTTTCCT+TGG + Chr3:21472373-21472392 MsG0380012626.01.T01:intron 30.0%
! TCATATTTTGTCATTCCAAG+TGG + Chr3:21472097-21472116 MsG0380012626.01.T01:intron 30.0%
! TTGCGTCTTATTATCAGAAA+GGG + Chr3:21471449-21471468 MsG0380012626.01.T01:CDS 30.0%
! TTTGCGTCTTATTATCAGAA+AGG + Chr3:21471448-21471467 MsG0380012626.01.T01:CDS 30.0%
! TTTTCATGGAATTGATCCTA+TGG + Chr3:21475548-21475567 MsG0380012626.01.T01:CDS 30.0%
!! GCAATTTGTTAATCTGAATG+TGG - Chr3:21474200-21474219 None:intergenic 30.0%
!!! AAACATTTTGACTCTGGAAA+TGG + Chr3:21472296-21472315 MsG0380012626.01.T01:CDS 30.0%
!!! AAGGAGTTTTAAGAAGTTCA+AGG - Chr3:21474094-21474113 None:intergenic 30.0%
!!! ATTTTTTCAAAGGGTGAGTA+TGG + Chr3:21474272-21474291 MsG0380012626.01.T01:intron 30.0%
!!! ATTTTTTTTTTACCGGGGAT+GGG + Chr3:21472831-21472850 MsG0380012626.01.T01:intron 30.0%
!!! GTGATTTTTTCATCAGAGAA+AGG + Chr3:21471160-21471179 MsG0380012626.01.T01:CDS 30.0%
AACCCAAACTTACATTCTGA+TGG - Chr3:21471947-21471966 None:intergenic 35.0%
AACTTACATTCTGATGGCTT+AGG - Chr3:21471941-21471960 None:intergenic 35.0%
AAGCCATCAGAATGTAAGTT+TGG + Chr3:21471941-21471960 MsG0380012626.01.T01:intron 35.0%
AATTCTTGCAGCATACACAA+CGG - Chr3:21472203-21472222 None:intergenic 35.0%
ACAACATCTACAAGGATTTG+GGG - Chr3:21472544-21472563 None:intergenic 35.0%
ACATGTCATGCATATCGAAA+TGG - Chr3:21475188-21475207 None:intergenic 35.0%
AGAAGAAGATGAAGATTACG+AGG + Chr3:21475617-21475636 MsG0380012626.01.T01:CDS 35.0%
AGATGAAATAAGAGATGCTG+TGG - Chr3:21473120-21473139 None:intergenic 35.0%
AGCCATCAGAATGTAAGTTT+GGG + Chr3:21471942-21471961 MsG0380012626.01.T01:intron 35.0%
ATACATGGAGCATAGAAAGT+AGG - Chr3:21473481-21473500 None:intergenic 35.0%
ATCATAGGAAGATGATGTAG+AGG + Chr3:21472734-21472753 MsG0380012626.01.T01:intron 35.0%
ATGATAATCAAGCTTGACCA+AGG - Chr3:21472393-21472412 None:intergenic 35.0%
CAACAACATCTACAAGGATT+TGG - Chr3:21472546-21472565 None:intergenic 35.0%
CATAAAGAATAAACTGCTGG+AGG - Chr3:21472682-21472701 None:intergenic 35.0%
CATTGGTCAGTAACAGTAAA+AGG - Chr3:21471219-21471238 None:intergenic 35.0%
GAAAGTAGGGAATGTAATTG+AGG - Chr3:21473467-21473486 None:intergenic 35.0%
GAAATCCATCCATATAGTCA+CGG + Chr3:21472502-21472521 MsG0380012626.01.T01:intron 35.0%
GAAATGGAAATTGTCCATTG+GGG + Chr3:21472312-21472331 MsG0380012626.01.T01:CDS 35.0%
GAACAGAAAAAAGACCAAAG+AGG + Chr3:21474361-21474380 MsG0380012626.01.T01:intron 35.0%
GAATAGTGTGTAAGTGGTAA+AGG - Chr3:21473647-21473666 None:intergenic 35.0%
GATAATGCCATCATCTCAAA+TGG - Chr3:21475294-21475313 None:intergenic 35.0%
GATGTATTCGTTTGACCAAA+TGG - Chr3:21474169-21474188 None:intergenic 35.0%
GGAAATGGAAATTGTCCATT+GGG + Chr3:21472311-21472330 MsG0380012626.01.T01:CDS 35.0%
GTAAAATGGTGAATGTGACA+AGG - Chr3:21473064-21473083 None:intergenic 35.0%
GTAGTTTCTTCAATCTTGGT+TGG + Chr3:21473187-21473206 MsG0380012626.01.T01:intron 35.0%
GTGCTAAAGTAGCATCAAAT+TGG + Chr3:21471575-21471594 MsG0380012626.01.T01:CDS 35.0%
GTTAGGTTATGGTAGTTTCT+AGG + Chr3:21474061-21474080 MsG0380012626.01.T01:intron 35.0%
TACATGGAGCATAGAAAGTA+GGG - Chr3:21473480-21473499 None:intergenic 35.0%
TATCATTGTTGTCGATGTGT+CGG + Chr3:21471318-21471337 MsG0380012626.01.T01:intron 35.0%
TATTGGAATAATGCTGGTAG+TGG + Chr3:21473909-21473928 MsG0380012626.01.T01:intron 35.0%
TCACTACACATTGGAATACA+TGG - Chr3:21473496-21473515 None:intergenic 35.0%
TGAAACTACTTGGAAGATCT+TGG - Chr3:21473040-21473059 None:intergenic 35.0%
TGGAAATGGAAATTGTCCAT+TGG + Chr3:21472310-21472329 MsG0380012626.01.T01:CDS 35.0%
TTAAGTCAGTGGTTAGGTTA+TGG + Chr3:21474050-21474069 MsG0380012626.01.T01:intron 35.0%
TTAGTGGTTTATAGGAGCAA+TGG - Chr3:21473329-21473348 None:intergenic 35.0%
TTGCAATCAATCAACCTGAA+AGG - Chr3:21472278-21472297 None:intergenic 35.0%
TTGGCTGAAAATGATACTAG+AGG + Chr3:21474429-21474448 MsG0380012626.01.T01:intron 35.0%
TTTATCCGTGACTATATGGA+TGG - Chr3:21472510-21472529 None:intergenic 35.0%
TTTCGATATGCATGACATGT+TGG + Chr3:21475188-21475207 MsG0380012626.01.T01:CDS 35.0%
TTTGAGGACTTGTGACAAAA+AGG + Chr3:21471841-21471860 MsG0380012626.01.T01:intron 35.0%
! AATGGATCCATTTGAGATGA+TGG + Chr3:21475284-21475303 MsG0380012626.01.T01:CDS 35.0%
! CCATACCTGCAAAATTTTGT+GGG - Chr3:21473834-21473853 None:intergenic 35.0%
! TAAGCTTTTACCCACCAAAT+GGG + Chr3:21473781-21473800 MsG0380012626.01.T01:intron 35.0%
! TTAAGCTTTTACCCACCAAA+TGG + Chr3:21473780-21473799 MsG0380012626.01.T01:intron 35.0%
! TTTTGTGATCCATGAGTTGT+TGG + Chr3:21474406-21474425 MsG0380012626.01.T01:intron 35.0%
!! CAAAAAGGAAAAGTACCTTC+TGG + Chr3:21471856-21471875 MsG0380012626.01.T01:intron 35.0%
!! GACACACTTGTTTTTCCATT+TGG + Chr3:21474151-21474170 MsG0380012626.01.T01:intron 35.0%
!! GGTCTACTAGACTTGTTAAT+GGG + Chr3:21473802-21473821 MsG0380012626.01.T01:intron 35.0%
!! GTCTACTAGACTTGTTAATG+GGG + Chr3:21473803-21473822 MsG0380012626.01.T01:intron 35.0%
!! TTAACACTGATTTCCCTCTT+TGG - Chr3:21474378-21474397 None:intergenic 35.0%
!!! ACGTAGTGTTTTTGGTGATA+GGG + Chr3:21474554-21474573 MsG0380012626.01.T01:intron 35.0%
!!! AGGGACTCAGATTTTTTTGA+GGG + Chr3:21475261-21475280 MsG0380012626.01.T01:CDS 35.0%
!!! CATTTTTTTTTTACCGGGGA+TGG + Chr3:21472830-21472849 MsG0380012626.01.T01:intron 35.0%
!!! CTCAGATTTTTTTGAGGGAA+TGG + Chr3:21475266-21475285 MsG0380012626.01.T01:CDS 35.0%
!!! GATTGCAAACATTTTGACTC+TGG + Chr3:21472290-21472309 MsG0380012626.01.T01:CDS 35.0%
!!! GTTTCTGGGATAGATGATTT+TGG + Chr3:21475516-21475535 MsG0380012626.01.T01:CDS 35.0%
!!! TACGTAGTGTTTTTGGTGAT+AGG + Chr3:21474553-21474572 MsG0380012626.01.T01:intron 35.0%
!!! TTTTTTTTTTACCGGGGATG+GGG + Chr3:21472832-21472851 MsG0380012626.01.T01:intron 35.0%
AAAATCTGAGTCCCTCATGA+TGG - Chr3:21475256-21475275 None:intergenic 40.0%
AAAGCAAGAGACAAGAGAGA+TGG - Chr3:21472358-21472377 None:intergenic 40.0%
AAGATGATGCTTGAGAAGCT+CGG - Chr3:21471513-21471532 None:intergenic 40.0%
AAGCATCAACAACAGTGTAG+GGG - Chr3:21474642-21474661 None:intergenic 40.0%
ACAAGCATCAACAACAGTGT+AGG - Chr3:21474644-21474663 None:intergenic 40.0%
ACAAGTCTAGTAGACCCATT+TGG - Chr3:21473798-21473817 None:intergenic 40.0%
ACTCATTCTCAGATCACTCA+TGG - Chr3:21474474-21474493 None:intergenic 40.0%
AGCTTCTCAAGCATCATCTT+CGG + Chr3:21471513-21471532 MsG0380012626.01.T01:CDS 40.0%
ATAACTACAAGGCAAACTGC+AGG + Chr3:21472159-21472178 MsG0380012626.01.T01:intron 40.0%
ATCATCTATCCCAGAAACCA+TGG - Chr3:21475514-21475533 None:intergenic 40.0%
ATCATTGTTGTCGATGTGTC+GGG + Chr3:21471319-21471338 MsG0380012626.01.T01:intron 40.0%
ATGAAGTGAAGACAACAGGA+AGG - Chr3:21474336-21474355 None:intergenic 40.0%
ATTCAGACGATGAGGATGAT+GGG + Chr3:21475358-21475377 MsG0380012626.01.T01:CDS 40.0%
ATTTGTAGGTATGGCCCTAT+AGG + Chr3:21473871-21473890 MsG0380012626.01.T01:intron 40.0%
CAAGCATCAACAACAGTGTA+GGG - Chr3:21474643-21474662 None:intergenic 40.0%
CCTGCATCCTACTGATAAAA+AGG + Chr3:21471805-21471824 MsG0380012626.01.T01:intron 40.0%
GAAGGAACCTTTGTAACCTT+CGG - Chr3:21471604-21471623 None:intergenic 40.0%
GAATCAAAAGGACCCAAACA+AGG - Chr3:21475342-21475361 None:intergenic 40.0%
GATATCAAAGCTGCATCCAT+AGG - Chr3:21475567-21475586 None:intergenic 40.0%
GTATTCCAATGTGTAGTGAC+TGG + Chr3:21473497-21473516 MsG0380012626.01.T01:intron 40.0%
GTGACAAGGATGAAACTACT+TGG - Chr3:21473050-21473069 None:intergenic 40.0%
GTGTTTAACTGCCTGTGTTT+CGG - Chr3:21474819-21474838 None:intergenic 40.0%
GTTTGTCATGTATCCGCAAT+TGG + Chr3:21471993-21472012 MsG0380012626.01.T01:intron 40.0%
TCAAATTGCTGCTATGCAAG+AGG + Chr3:21475392-21475411 MsG0380012626.01.T01:CDS 40.0%
TCCTCATCGTCTGAATCAAA+AGG - Chr3:21475354-21475373 None:intergenic 40.0%
TGAAGTGAAGACAACAGGAA+GGG - Chr3:21474335-21474354 None:intergenic 40.0%
TGAGTTATGACGCATTGCAT+TGG + Chr3:21473705-21473724 MsG0380012626.01.T01:intron 40.0%
TGGTTTATAGGAGCAATGGA+CGG - Chr3:21473325-21473344 None:intergenic 40.0%
TGTCATGAAGTGAAGACAAC+AGG - Chr3:21474340-21474359 None:intergenic 40.0%
TGTTTAACTGCCTGTGTTTC+GGG - Chr3:21474818-21474837 None:intergenic 40.0%
TTCTTCCAGTCACTACACAT+TGG - Chr3:21473505-21473524 None:intergenic 40.0%
! ACACTTGTAGCTTTACACGT+TGG - Chr3:21474229-21474248 None:intergenic 40.0%
! AGGGCCATACCTACAAATTT+TGG - Chr3:21473869-21473888 None:intergenic 40.0%
! AGTACTGGATTCACCAACAT+CGG - Chr3:21471677-21471696 None:intergenic 40.0%
! AGTCACCCACAAAATTTTGC+AGG + Chr3:21473826-21473845 MsG0380012626.01.T01:intron 40.0%
! CACATGAGTCAGTGTCTTTT+CGG - Chr3:21471269-21471288 None:intergenic 40.0%
! CAGTGTCTTTTCGGTGATTA+GGG - Chr3:21471260-21471279 None:intergenic 40.0%
! CCCACAAAATTTTGCAGGTA+TGG + Chr3:21473831-21473850 MsG0380012626.01.T01:intron 40.0%
! CCTTTTTATCAGTAGGATGC+AGG - Chr3:21471808-21471827 None:intergenic 40.0%
! CTTTTCGGTGATTAGGGTAT+CGG - Chr3:21471254-21471273 None:intergenic 40.0%
! GCCATACCTGCAAAATTTTG+TGG - Chr3:21473835-21473854 None:intergenic 40.0%
! GTAGTAGGCAAGTGGTATTT+TGG + Chr3:21472951-21472970 MsG0380012626.01.T01:intron 40.0%
! GTTATGATTTTGTCAGGTGG+AGG - Chr3:21474746-21474765 None:intergenic 40.0%
! TCAGTGTCTTTTCGGTGATT+AGG - Chr3:21471261-21471280 None:intergenic 40.0%
! TTTGGCCCTGATGATTTTCA+TGG + Chr3:21475534-21475553 MsG0380012626.01.T01:CDS 40.0%
!! AACACCTCATGGACTAGATA+AGG + Chr3:21474834-21474853 MsG0380012626.01.T01:intron 40.0%
!! ATCGGTGCTACAAAGTACAT+TGG - Chr3:21471236-21471255 None:intergenic 40.0%
!! GCAAGTGGTATTTTGGACTT+TGG + Chr3:21472958-21472977 MsG0380012626.01.T01:intron 40.0%
!! GGGTCTACTAGACTTGTTAA+TGG + Chr3:21473801-21473820 MsG0380012626.01.T01:intron 40.0%
!! GTTTCGGGTGGACTAAATAA+TGG - Chr3:21474803-21474822 None:intergenic 40.0%
!! TCCTTTTGATTCAGACGATG+AGG + Chr3:21475350-21475369 MsG0380012626.01.T01:CDS 40.0%
!!! AAATGGTTTTGTCTGCGTTG+AGG - Chr3:21475171-21475190 None:intergenic 40.0%
!!! GAGGGACTCAGATTTTTTTG+AGG + Chr3:21475260-21475279 MsG0380012626.01.T01:CDS 40.0%
!!! TTTTTTTTTACCGGGGATGG+GGG + Chr3:21472833-21472852 MsG0380012626.01.T01:intron 40.0%
AACAGGAAGGGTCTGGATAT+AGG - Chr3:21474323-21474342 None:intergenic 45.0%
ACAGGCAGTTAAACACCTCA+TGG + Chr3:21474823-21474842 MsG0380012626.01.T01:intron 45.0%
AGCATCAAATTGGGTTCCGA+AGG + Chr3:21471585-21471604 MsG0380012626.01.T01:CDS 45.0%
AGCATCATCTTCGGCATCTA+TGG + Chr3:21471522-21471541 MsG0380012626.01.T01:CDS 45.0%
AGGACAATGCTAGCAACTAG+CGG - Chr3:21473627-21473646 None:intergenic 45.0%
AGTCTAGTAGACCCATTTGG+TGG - Chr3:21473795-21473814 None:intergenic 45.0%
ATCAACAACAGTGTAGGGGA+GGG - Chr3:21474638-21474657 None:intergenic 45.0%
ATTTAGTCCACCCGAAACAC+AGG + Chr3:21474805-21474824 MsG0380012626.01.T01:intron 45.0%
CAACTAGCGGCTCTGTATTA+GGG - Chr3:21473614-21473633 None:intergenic 45.0%
CATGACATGTTGGATGTGCT+CGG + Chr3:21475198-21475217 MsG0380012626.01.T01:CDS 45.0%
CCAACCTCTGCAATGGAAAT+CGG + Chr3:21472028-21472047 MsG0380012626.01.T01:intron 45.0%
CGATTTCCATTGCAGAGGTT+GGG - Chr3:21472030-21472049 None:intergenic 45.0%
CTACAAGGATTTGGGGAGAA+CGG - Chr3:21472537-21472556 None:intergenic 45.0%
CTGATGGCTTAGGTTTCGAA+AGG - Chr3:21471931-21471950 None:intergenic 45.0%
GATGGCATTATCAGATTCGC+TGG + Chr3:21475302-21475321 MsG0380012626.01.T01:CDS 45.0%
GATTCAGACGATGAGGATGA+TGG + Chr3:21475357-21475376 MsG0380012626.01.T01:CDS 45.0%
GATTTCCATTGCAGAGGTTG+GGG - Chr3:21472029-21472048 None:intergenic 45.0%
GCAATGCGTCATAACTCAAG+AGG - Chr3:21473703-21473722 None:intergenic 45.0%
GGTGGATGTTCTCGTATTCA+CGG + Chr3:21471752-21471771 MsG0380012626.01.T01:intron 45.0%
GTCTAGTAGACCCATTTGGT+GGG - Chr3:21473794-21473813 None:intergenic 45.0%
GTGAATACGAGAACATCCAC+CGG - Chr3:21471753-21471772 None:intergenic 45.0%
GTGATCCATGAGTTGTTGGT+TGG + Chr3:21474410-21474429 MsG0380012626.01.T01:intron 45.0%
TCATTCCCAAGTAGCTCAGT+TGG - Chr3:21474133-21474152 None:intergenic 45.0%
TGAATACGAGAACATCCACC+GGG - Chr3:21471752-21471771 None:intergenic 45.0%
TGCAACATACACTAGCCAGT+AGG - Chr3:21473215-21473234 None:intergenic 45.0%
TGCTCCTTATCTAGTCCATG+AGG - Chr3:21474841-21474860 None:intergenic 45.0%
TGTCTCATGTAGTAGGCAAG+TGG + Chr3:21472943-21472962 MsG0380012626.01.T01:intron 45.0%
TTATAGGAGCAATGGACGGA+GGG - Chr3:21473321-21473340 None:intergenic 45.0%
TTCAGCCAACCAACAACTCA+TGG - Chr3:21474418-21474437 None:intergenic 45.0%
TTGGAAGATCTTGGAGACGA+TGG - Chr3:21473031-21473050 None:intergenic 45.0%
TTGGGTTCCGAAGGTTACAA+AGG + Chr3:21471594-21471613 MsG0380012626.01.T01:CDS 45.0%
TTTATAGGAGCAATGGACGG+AGG - Chr3:21473322-21473341 None:intergenic 45.0%
TTTCAGCATACAGTGAAGCC+TGG + Chr3:21475114-21475133 MsG0380012626.01.T01:CDS 45.0%
! ATGATTTTGTCAGGTGGAGG+TGG - Chr3:21474743-21474762 None:intergenic 45.0%
! CAGAAAGCGTGATCACATTC+TGG - Chr3:21471974-21471993 None:intergenic 45.0%
! CAGAAAGGGTCTTGTGCTTA+TGG + Chr3:21471463-21471482 MsG0380012626.01.T01:CDS 45.0%
! GATGTTGGTGAATCCAGTAC+TGG + Chr3:21471676-21471695 MsG0380012626.01.T01:CDS 45.0%
! GGTCTTGTGCTTATGGTAGT+CGG + Chr3:21471470-21471489 MsG0380012626.01.T01:CDS 45.0%
! GGTGAGGTTGATCTATCAAG+TGG + Chr3:21475219-21475238 MsG0380012626.01.T01:CDS 45.0%
! TAGTGGGTAAGAGTGGAAGT+AGG + Chr3:21473961-21473980 MsG0380012626.01.T01:intron 45.0%
!! ACTACCGATTTCCATTGCAG+AGG - Chr3:21472035-21472054 None:intergenic 45.0%
!! ATACTGGTAGTGGGTAAGAG+TGG + Chr3:21473954-21473973 MsG0380012626.01.T01:intron 45.0%
!! GTTTGCAAGTTTTATGCGCG+AGG + Chr3:21471114-21471133 MsG0380012626.01.T01:CDS 45.0%
!!! AGTGTTTTTGGTGATAGGGC+AGG + Chr3:21474558-21474577 MsG0380012626.01.T01:intron 45.0%
!!! CGCTGTTTTTCAAAGCCAGA+AGG - Chr3:21471874-21471893 None:intergenic 45.0%
!! TATAAAAATTTAATTAAAAG+GGG + Chr3:21474892-21474911 MsG0380012626.01.T01:intron 5.0%
ACTTTAGCACTACGAGCCAC+AGG - Chr3:21471565-21471584 None:intergenic 50.0%
AGCATAACCACAAGCGAACG+AGG + Chr3:21472580-21472599 MsG0380012626.01.T01:intron 50.0%
AGCCACCAACTGAGCTACTT+GGG + Chr3:21474125-21474144 MsG0380012626.01.T01:intron 50.0%
AGGGCAGGTTCTCACTGTAT+TGG - Chr3:21472062-21472081 None:intergenic 50.0%
ATGACAGTTTGCGGCAGACA+GGG - Chr3:21472081-21472100 None:intergenic 50.0%
ATGCAAGAGGCCATGGTTTC+TGG + Chr3:21475501-21475520 MsG0380012626.01.T01:CDS 50.0%
CATCAACAACAGTGTAGGGG+AGG - Chr3:21474639-21474658 None:intergenic 50.0%
CATCAGGACTCTACCGATGT+TGG + Chr3:21471661-21471680 MsG0380012626.01.T01:CDS 50.0%
CCGATTTCCATTGCAGAGGT+TGG - Chr3:21472031-21472050 None:intergenic 50.0%
CGTCATCGTCATCGTCATCA+GGG - Chr3:21475446-21475465 None:intergenic 50.0%
CTGTGTTCAAGGGTTTCGGT+AGG - Chr3:21474688-21474707 None:intergenic 50.0%
GAATACGAGAACATCCACCG+GGG - Chr3:21471751-21471770 None:intergenic 50.0%
GCAACTAGCGGCTCTGTATT+AGG - Chr3:21473615-21473634 None:intergenic 50.0%
GCATTATCAGATTCGCTGGC+TGG + Chr3:21475306-21475325 MsG0380012626.01.T01:CDS 50.0%
GGGTTCGTGTCAGTGTCATA+TGG + Chr3:21471339-21471358 MsG0380012626.01.T01:intron 50.0%
GGGTTTACAACGCAAGCATC+AGG + Chr3:21471645-21471664 MsG0380012626.01.T01:CDS 50.0%
GTAGAAACAGCTAGCCCCAA+TGG - Chr3:21472329-21472348 None:intergenic 50.0%
GTGGCTGTGTTCAAGGGTTT+CGG - Chr3:21474692-21474711 None:intergenic 50.0%
GTTATCTTAACCCCCATCCC+CGG - Chr3:21472846-21472865 None:intergenic 50.0%
GTTTCGGTAGGCTAGGACAA+TGG - Chr3:21474676-21474695 None:intergenic 50.0%
TAGCCACCAACTGAGCTACT+TGG + Chr3:21474124-21474143 MsG0380012626.01.T01:intron 50.0%
TATAGGAGCAATGGACGGAG+GGG - Chr3:21473320-21473339 None:intergenic 50.0%
TATGACAGTTTGCGGCAGAC+AGG - Chr3:21472082-21472101 None:intergenic 50.0%
TCAACAACAGTGTAGGGGAG+GGG - Chr3:21474637-21474656 None:intergenic 50.0%
TCGAATGGCTGCTATGCAAG+AGG + Chr3:21475488-21475507 MsG0380012626.01.T01:CDS 50.0%
TCGTCATCGTCATCGTCATC+AGG - Chr3:21475447-21475466 None:intergenic 50.0%
TGAAGACAACAGGAAGGGTC+TGG - Chr3:21474330-21474349 None:intergenic 50.0%
TGAAGCCTGGCTCATACACA+TGG + Chr3:21475127-21475146 MsG0380012626.01.T01:CDS 50.0%
TGACGATGACGATGACGATG+AGG + Chr3:21475449-21475468 MsG0380012626.01.T01:CDS 50.0%
TGCAAGAGGCCATGGTTTCT+GGG + Chr3:21475502-21475521 MsG0380012626.01.T01:CDS 50.0%
TGCTTGTTCAGCAGCTAGCT+AGG + Chr3:21474507-21474526 MsG0380012626.01.T01:intron 50.0%
TGGTCTAGCACTACCAGTAC+TGG - Chr3:21471692-21471711 None:intergenic 50.0%
TGGTGGCTAAGGGACATCAA+AGG - Chr3:21474113-21474132 None:intergenic 50.0%
TGTCTCCATGTGTATGAGCC+AGG - Chr3:21475135-21475154 None:intergenic 50.0%
TTAACTGCCTGTGTTTCGGG+TGG - Chr3:21474815-21474834 None:intergenic 50.0%
TTCAAGGGTTTCGGTAGGCT+AGG - Chr3:21474683-21474702 None:intergenic 50.0%
TTCCCAAGTAGCTCAGTTGG+TGG - Chr3:21474130-21474149 None:intergenic 50.0%
! ATGACGCATTGCATTGGCGA+TGG + Chr3:21473711-21473730 MsG0380012626.01.T01:intron 50.0%
! ATTTTGTCAGGTGGAGGTGG+TGG - Chr3:21474740-21474759 None:intergenic 50.0%
! CAATCTTGGTTGGTGCCTAC+TGG + Chr3:21473197-21473216 MsG0380012626.01.T01:intron 50.0%
! GCTCTTGGGATGGATGCTTT+TGG + Chr3:21475420-21475439 MsG0380012626.01.T01:CDS 50.0%
! TTATCAGATTCGCTGGCTGG+CGG + Chr3:21475309-21475328 MsG0380012626.01.T01:CDS 50.0%
! TTTTGTCTGCGTTGAGGTGG+TGG - Chr3:21475165-21475184 None:intergenic 50.0%
!! AGTAGCTCAGTTGGTGGCTA+AGG - Chr3:21474124-21474143 None:intergenic 50.0%
!! ATGGAAGGTGTCTGGAAACC+AGG - Chr3:21474715-21474734 None:intergenic 50.0%
!! CGGGTGGACTAAATAATGGC+AGG - Chr3:21474799-21474818 None:intergenic 50.0%
!! GACTAGATAAGGAGCACCCT+TGG + Chr3:21474845-21474864 MsG0380012626.01.T01:intron 50.0%
!! GTAGCTCAGTTGGTGGCTAA+GGG - Chr3:21474123-21474142 None:intergenic 50.0%
!! TGGAAGGTGTCTGGAAACCA+GGG - Chr3:21474714-21474733 None:intergenic 50.0%
!! TGGGGCTAGCTGTTTCTACA+AGG + Chr3:21472330-21472349 MsG0380012626.01.T01:CDS 50.0%
!!! TGGTTTTGTCTGCGTTGAGG+TGG - Chr3:21475168-21475187 None:intergenic 50.0%
AACCAGGGTGGCTGTGTTCA+AGG - Chr3:21474699-21474718 None:intergenic 55.0%
ACCAGGGTGGCTGTGTTCAA+GGG - Chr3:21474698-21474717 None:intergenic 55.0%
ACCTCACAAGCGCGGTGTAA+AGG + Chr3:21471624-21471643 MsG0380012626.01.T01:CDS 55.0%
AGCATCCATCCCAAGAGCCA+TGG - Chr3:21475418-21475437 None:intergenic 55.0%
ATGCAAGAGGCCATGGCTCT+TGG + Chr3:21475405-21475424 MsG0380012626.01.T01:CDS 55.0%
CATACACATGGAGACACCGC+AGG + Chr3:21475139-21475158 MsG0380012626.01.T01:CDS 55.0%
CCTCACAAGCGCGGTGTAAA+GGG + Chr3:21471625-21471644 MsG0380012626.01.T01:CDS 55.0%
GCGCGAGGCGTATGTTTGAA+AGG + Chr3:21471129-21471148 MsG0380012626.01.T01:CDS 55.0%
GGGCACTACTACGCCAATTG+CGG - Chr3:21472009-21472028 None:intergenic 55.0%
GTTCCTTCACCTCACAAGCG+CGG + Chr3:21471616-21471635 MsG0380012626.01.T01:CDS 55.0%
TAGTGCCCCAACCTCTGCAA+TGG + Chr3:21472021-21472040 MsG0380012626.01.T01:intron 55.0%
TCGGTAGGCTAGGACAATGG+TGG - Chr3:21474673-21474692 None:intergenic 55.0%
TGCAAGAGGCCATGGCTCTT+GGG + Chr3:21475406-21475425 MsG0380012626.01.T01:CDS 55.0%
TGCTGCTATGCAAGAGGCCA+TGG + Chr3:21475398-21475417 MsG0380012626.01.T01:CDS 55.0%
TGGCGGTTCAGGTCCTTGTT+TGG + Chr3:21475326-21475345 MsG0380012626.01.T01:CDS 55.0%
! AAGGTGTCTGGAAACCAGGG+TGG - Chr3:21474711-21474730 None:intergenic 55.0%
! CATGTTGGATGTGCTCGGTG+AGG + Chr3:21475203-21475222 MsG0380012626.01.T01:CDS 55.0%
! GGCGGTTCAGGTCCTTGTTT+GGG + Chr3:21475327-21475346 MsG0380012626.01.T01:CDS 55.0%
!! TGGTGGTGATGGAAGGTGTC+TGG - Chr3:21474723-21474742 None:intergenic 55.0%
AAGCGTGCCTCGTTCGCTTG+TGG - Chr3:21472590-21472609 None:intergenic 60.0%
ACACCGCGCTTGTGAGGTGA+AGG - Chr3:21471622-21471641 None:intergenic 60.0%
ACCCTTGAACACAGCCACCC+TGG + Chr3:21474694-21474713 MsG0380012626.01.T01:intron 60.0%
AGAACATCCACCGGGGCAGT+TGG - Chr3:21471744-21471763 None:intergenic 60.0%
AGAGGCCATGGCTCTTGGGA+TGG + Chr3:21475410-21475429 MsG0380012626.01.T01:CDS 60.0%
AGCAATGGACGGAGGGGTGA+TGG - Chr3:21473314-21473333 None:intergenic 60.0%
AGGGGAGGGGCAAACAAGGT+TGG - Chr3:21474624-21474643 None:intergenic 60.0%
CCCTTTACACCGCGCTTGTG+AGG - Chr3:21471628-21471647 None:intergenic 60.0%
GGCTGCTATGCAAGAGGCCA+TGG + Chr3:21475494-21475513 MsG0380012626.01.T01:CDS 60.0%
GGGGAGGGGCAAACAAGGTT+GGG - Chr3:21474623-21474642 None:intergenic 60.0%
GTGTAGGGGAGGGGCAAACA+AGG - Chr3:21474628-21474647 None:intergenic 60.0%
TTCAGATCCTGCTGCGCCTG+TGG + Chr3:21471546-21471565 MsG0380012626.01.T01:CDS 60.0%
TTTGCTGCTGCCAACTGCCC+CGG + Chr3:21471731-21471750 MsG0380012626.01.T01:intron 60.0%
! TCAGGTGGAGGTGGTGGTGA+TGG - Chr3:21474734-21474753 None:intergenic 60.0%
!! GTGGAGGTGGTGGTGATGGA+AGG - Chr3:21474730-21474749 None:intergenic 60.0%
CAGTTTGCGGCAGACAGGGC+AGG - Chr3:21472077-21472096 None:intergenic 65.0%
! GATTCGCTGGCTGGCGGTTC+AGG + Chr3:21475315-21475334 MsG0380012626.01.T01:CDS 65.0%
! TGCGTTGAGGTGGTGGCCTG+CGG - Chr3:21475158-21475177 None:intergenic 65.0%
CTACGAGCCACAGGCGCAGC+AGG - Chr3:21471556-21471575 None:intergenic 70.0%
GCTGCTGCCAACTGCCCCGG+TGG + Chr3:21471734-21471753 MsG0380012626.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 21471099 21475671 21471099 ID=MsG0380012626.01;Name=MsG0380012626.01
Chr3 mRNA 21471099 21475671 21471099 ID=MsG0380012626.01.T01;Parent=MsG0380012626.01;Name=MsG0380012626.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0.33|0.25|1|0.33|0.75|4|0|345
Chr3 exon 21471099 21471196 21471099 ID=MsG0380012626.01.T01:exon:4215;Parent=MsG0380012626.01.T01
Chr3 exon 21471447 21471725 21471447 ID=MsG0380012626.01.T01:exon:4216;Parent=MsG0380012626.01.T01
Chr3 exon 21472283 21472351 21472283 ID=MsG0380012626.01.T01:exon:4217;Parent=MsG0380012626.01.T01
Chr3 exon 21475080 21475671 21475080 ID=MsG0380012626.01.T01:exon:4218;Parent=MsG0380012626.01.T01
Chr3 CDS 21471099 21471196 21471099 ID=MsG0380012626.01.T01:cds;Parent=MsG0380012626.01.T01
Chr3 CDS 21471447 21471725 21471447 ID=MsG0380012626.01.T01:cds;Parent=MsG0380012626.01.T01
Chr3 CDS 21472283 21472351 21472283 ID=MsG0380012626.01.T01:cds;Parent=MsG0380012626.01.T01
Chr3 CDS 21475080 21475671 21475080 ID=MsG0380012626.01.T01:cds;Parent=MsG0380012626.01.T01
Gene Sequence

>MsG0380012626.01.T01

ATGAATTGTTTCAGGGTTTGCAAGTTTTATGCGCGAGGCGTATGTTTGAAAGGCGACCAATGTGATTTTTTCATCAGAGAAAGGATACTGCATCTGATATTTGCGTCTTATTATCAGAAAGGGTCTTGTGCTTATGGTAGTCGGTGCAGATATAAGCACGTCCGAGCTTCTCAAGCATCATCTTCGGCATCTATGGTTTCAGATCCTGCTGCGCCTGTGGCTCGTAGTGCTAAAGTAGCATCAAATTGGGTTCCGAAGGTTACAAAGGTTCCTTCACCTCACAAGCGCGGTGTAAAGGGTTTACAACGCAAGCATCAGGACTCTACCGATGTTGGTGAATCCAGTACTGGTAGTGCTAGACCACATGAATTTGTTTTGTTGATTGATTGCAAACATTTTGACTCTGGAAATGGAAATTGTCCATTGGGGCTAGCTGTTTCTACAAGATTTGTTTCTCTTTTAGGATTTGATATCTGTTACTTTCAGCATACAGTGAAGCCTGGCTCATACACATGGAGACACCGCAGGCCACCACCTCAACGCAGACAAAACCATTTCGATATGCATGACATGTTGGATGTGCTCGGTGAGGTTGATCTATCAAGTGGAGAATTTTATTCCATCATGAGGGACTCAGATTTTTTTGAGGGAATGGATCCATTTGAGATGATGGCATTATCAGATTCGCTGGCTGGCGGTTCAGGTCCTTGTTTGGGTCCTTTTGATTCAGACGATGAGGATGATGGGTTTCGTGTTTCTCAAATTGCTGCTATGCAAGAGGCCATGGCTCTTGGGATGGATGCTTTTGGCCCTGATGACGATGACGATGACGATGAGGAAGAGTTTAATGTTTTTCGAATGGCTGCTATGCAAGAGGCCATGGTTTCTGGGATAGATGATTTTGGCCCTGATGATTTTCATGGAATTGATCCTATGGATGCAGCTTTGATATCAATGATGATGCATTCTCATATGGACGACGAAGAAGAAGATGAAGATTACGAGGATGAAGAAGAATACACTGATGATGAATATTAG
Protein sequence

>MsG0380012626.01.T01

MNCFRVCKFYARGVCLKGDQCDFFIRERILHLIFASYYQKGSCAYGSRCRYKHVRASQASSSASMVSDPAAPVARSAKVASNWVPKVTKVPSPHKRGVKGLQRKHQDSTDVGESSTGSARPHEFVLLIDCKHFDSGNGNCPLGLAVSTRFVSLLGFDICYFQHTVKPGSYTWRHRRPPPQRRQNHFDMHDMLDVLGEVDLSSGEFYSIMRDSDFFEGMDPFEMMALSDSLAGGSGPCLGPFDSDDEDDGFRVSQIAAMQEAMALGMDAFGPDDDDDDDEEEFNVFRMAAMQEAMVSGIDDFGPDDFHGIDPMDAALISMMMHSHMDDEEEDEDYEDEEEYTDDEY*