AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016707.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016707.01.T01 MTR_3g093800 86.992 369 2 1 1 323 1 369 0.0 637
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016707.01.T01 AT2G38560 48.947 380 129 9 6 323 2 378 1.11e-95 288
MsG0380016707.01.T01 AT4G18720 34.940 249 126 7 5 252 2 215 1.29e-33 125
MsG0380016707.01.T01 AT2G42725 33.333 267 137 7 5 268 2 230 1.16e-32 122
MsG0380016707.01.T01 AT5G42325 29.924 264 131 9 7 268 4 215 3.59e-22 93.6

Find 138 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATCAAAGCCGCCGCCTTC+TGG 0.116104 3:-86879967 MsG0380016707.01.T01:five_prime_UTR
CGCATTCGAGATTTGACATT+TGG 0.202290 3:-86880035 MsG0380016707.01.T01:five_prime_UTR
GCGAGTTTGCATTTGGTAAT+AGG 0.248412 3:+86872911 None:intergenic
GTCCTTAATGTTTAATCTTA+AGG 0.250681 3:-86873150 MsG0380016707.01.T01:CDS
ATTCAGCGCGAGACAAAATA+AGG 0.257557 3:-86873334 MsG0380016707.01.T01:CDS
ATCCTTAAGATTAAACATTA+AGG 0.282366 3:+86873148 None:intergenic
CATCAAAGCCGCCGCCTTCT+GGG 0.283544 3:-86879966 MsG0380016707.01.T01:five_prime_UTR
ATCAGAAGAACCCTGATTTC+CGG 0.285749 3:-86873127 MsG0380016707.01.T01:CDS
TAGAAAAGTTGGTAGAAAAT+AGG 0.288105 3:-86878886 MsG0380016707.01.T01:five_prime_UTR
GAAAATAGGCTTAGATGGTT+TGG 0.298632 3:-86878872 MsG0380016707.01.T01:five_prime_UTR
AGGACCTATACTTGACCTTT+TGG 0.308451 3:+86873168 None:intergenic
AGTCCGTATTATTTGAAAAC+TGG 0.312826 3:-86873208 MsG0380016707.01.T01:CDS
GCCAAGGTGGAGAAAGTTAA+TGG 0.315639 3:-86873539 MsG0380016707.01.T01:CDS
GGATGAAGAGCGGGTTTATA+GGG 0.318389 3:-86879008 MsG0380016707.01.T01:five_prime_UTR
AATTGATCAGTAGTAGCTTT+TGG 0.339749 3:+86872966 None:intergenic
GAGGCAACGGGTTTCTTCGC+TGG 0.347716 3:+86875413 None:intergenic
TGGTAGAAAATAGGCTTAGA+TGG 0.349489 3:-86878877 MsG0380016707.01.T01:five_prime_UTR
ACTGTCACTGCCACACGAAT+AGG 0.349730 3:+86873233 None:intergenic
AGGATGAAGAGCGGGTTTAT+AGG 0.355839 3:-86879009 MsG0380016707.01.T01:five_prime_UTR
CAGCACTGCGAGTTTGCATT+TGG 0.373188 3:+86872904 None:intergenic
AAAATAGGCTTAGATGGTTT+GGG 0.379731 3:-86878871 MsG0380016707.01.T01:five_prime_UTR
GTTCTATCATAAATCATGTT+TGG 0.380256 3:+86878707 None:intergenic
CTCCTTCGCTTTGATGTTCG+AGG 0.381420 3:+86873439 None:intergenic
TGGGGCGTCACCGCCGGTAC+TGG 0.383671 3:-86879947 MsG0380016707.01.T01:five_prime_UTR
CGTCATGAGCTCAGCAGAAA+TGG 0.387279 3:-86873063 MsG0380016707.01.T01:CDS
ATCATAGTCTTCAGCTTTGG+TGG 0.390447 3:+86873368 None:intergenic
TGGCGCTCTTTACCTCGTTC+AGG 0.391249 3:-86879927 MsG0380016707.01.T01:intron
CTTTGGTGGAGCAGCAGCGC+TGG 0.398518 3:+86873382 None:intergenic
GCATTCGAGATTTGACATTT+GGG 0.402433 3:-86880034 MsG0380016707.01.T01:five_prime_UTR
AGAATAGACGAGATAGGATT+AGG 0.411720 3:-86878949 MsG0380016707.01.T01:five_prime_UTR
GCCTTCTGGGGCGTCACCGC+CGG 0.416409 3:-86879953 MsG0380016707.01.T01:five_prime_UTR
GGATTAGGAATGACACCATC+AGG 0.421546 3:-86878934 MsG0380016707.01.T01:five_prime_UTR
ACGAAGCTTCGCAGGTAAAC+CGG 0.422169 3:+86880003 None:intergenic
GAAAACTGGGGTCCTTCAAA+TGG 0.424609 3:-86873194 MsG0380016707.01.T01:CDS
TTGATCATAGTCTTCAGCTT+TGG 0.429713 3:+86873365 None:intergenic
TACTGTTGAGCCACAGCGGC+TGG 0.438165 3:-86873087 MsG0380016707.01.T01:CDS
TTCAAGCGCATCGAGGCAAC+GGG 0.440343 3:+86875401 None:intergenic
TCATCCTCATGTTTGAAGTC+GGG 0.444131 3:+86879025 None:intergenic
AACCGTTAGAAAGGATTTAG+AGG 0.449929 3:-86878744 MsG0380016707.01.T01:five_prime_UTR
CTCATGACGGCCAGCCGCTG+TGG 0.450612 3:+86873077 None:intergenic
AATCGAGCACGAAGCTTCGC+AGG 0.450651 3:+86879995 None:intergenic
CTCATCCAGCCGCAAGGAGC+GGG 0.450789 3:+86878977 None:intergenic
CTGTCACTGCCACACGAATA+GGG 0.453244 3:+86873234 None:intergenic
ATAAACCCGCTCCTTGCGGC+TGG 0.455342 3:-86878982 MsG0380016707.01.T01:five_prime_UTR
AGGCAACGGGTTTCTTCGCT+GGG 0.460026 3:+86875414 None:intergenic
TTCGTGTAACAGAGAGTGGT+TGG 0.462260 3:-86875529 MsG0380016707.01.T01:intron
TCCTTCAAATGGAGCCCAAA+AGG 0.467781 3:-86873183 MsG0380016707.01.T01:CDS
TTCATCCTCATGTTTGAAGT+CGG 0.467968 3:+86879024 None:intergenic
CAGAGAGTGGTTGGGTTCGA+TGG 0.468288 3:-86875520 MsG0380016707.01.T01:exon
ACTAAGTGGGGTCGGCTACA+TGG 0.470126 3:+86878666 None:intergenic
GTGGTTGGGTTCGATGGAGA+AGG 0.470982 3:-86875514 MsG0380016707.01.T01:exon
TATAAGAGAAACCGTTAGAA+AGG 0.471420 3:-86878753 MsG0380016707.01.T01:five_prime_UTR
GGTTCATCAAAGCTGAGCTC+TGG 0.479292 3:-86873512 MsG0380016707.01.T01:CDS
TTCTTCGCTGGGACTATCAT+CGG 0.481323 3:+86875425 None:intergenic
AGATCAGATGGAGAAGAGTC+AGG 0.481617 3:-86878807 MsG0380016707.01.T01:five_prime_UTR
CAAGTGACATAGGTTGTCAT+AGG 0.486857 3:+86872876 None:intergenic
GGATTTAGAGGTCAATGAGT+TGG 0.489885 3:-86878732 MsG0380016707.01.T01:five_prime_UTR
CCCATTAACTTTCTCCACCT+TGG 0.490756 3:+86873538 None:intergenic
CCTTTCTCAACCTTCACTGA+AGG 0.497037 3:+86873569 None:intergenic
GTCCGTATTATTTGAAAACT+GGG 0.498242 3:-86873207 MsG0380016707.01.T01:CDS
GTTCAAGCGCATCGAGGCAA+CGG 0.502578 3:+86875400 None:intergenic
TGATTTATGATAGAACACTA+TGG 0.504275 3:-86878700 MsG0380016707.01.T01:five_prime_UTR
TCGTGTAACAGAGAGTGGTT+GGG 0.509152 3:-86875528 MsG0380016707.01.T01:intron
CCAAGGTGGAGAAAGTTAAT+GGG 0.509185 3:-86873538 MsG0380016707.01.T01:CDS
GGGACTATCATCGGTGGAGG+TGG 0.510748 3:+86875434 None:intergenic
TGTAAGAAGAGTAGATCAGA+TGG 0.512823 3:-86878819 MsG0380016707.01.T01:five_prime_UTR
AGTCAGGTCAAAAGAGGTAG+AGG 0.515079 3:-86878791 MsG0380016707.01.T01:five_prime_UTR
TGACACCATCAGGGAGAGAG+TGG 0.525917 3:-86878924 MsG0380016707.01.T01:five_prime_UTR
AGCACCTATAGTAGAAAAGT+TGG 0.529249 3:-86878897 MsG0380016707.01.T01:five_prime_UTR
GCAGTTAACACAAGTGACAT+AGG 0.530050 3:+86872866 None:intergenic
CTAAGGTTGAGTCAACGAAT+GGG 0.530166 3:-86873625 MsG0380016707.01.T01:intron
AAAGAGGTAGAGGAAGACTT+AGG 0.531988 3:-86878781 MsG0380016707.01.T01:five_prime_UTR
CCTTCAGTGAAGGTTGAGAA+AGG 0.536034 3:-86873569 MsG0380016707.01.T01:CDS
ATCAAAGCCGCCGCCTTCTG+GGG 0.537145 3:-86879965 MsG0380016707.01.T01:five_prime_UTR
GAAGGAGAAAGAGAAAGAGT+TGG 0.537798 3:-86875496 MsG0380016707.01.T01:CDS
AGCATCCGCCGCTTTCTTCG+CGG 0.541475 3:+86875458 None:intergenic
GGCGGTGACGCCCCAGAAGG+CGG 0.545488 3:+86879955 None:intergenic
GACCTCTAAATCCTTTCTAA+CGG 0.546413 3:+86878742 None:intergenic
AGAGGCAGATGAAGATATGA+TGG 0.547455 3:-86873276 MsG0380016707.01.T01:CDS
CAAACATGAGGATGAAGAGC+GGG 0.550788 3:-86879017 MsG0380016707.01.T01:five_prime_UTR
GGTGACGCCCCAGAAGGCGG+CGG 0.551057 3:+86879958 None:intergenic
GAGGTAAAGAGCGCCAGTAC+CGG 0.552484 3:+86879934 None:intergenic
GAGAAGAGTCAGGTCAAAAG+AGG 0.553466 3:-86878797 MsG0380016707.01.T01:five_prime_UTR
GTGGAGAAAGTTAATGGGAA+TGG 0.557971 3:-86873533 MsG0380016707.01.T01:CDS
TCTCCGAGATGCTTTAGCTA+AGG 0.559780 3:-86873306 MsG0380016707.01.T01:CDS
TTCAGCGCGAGACAAAATAA+GGG 0.562584 3:-86873333 MsG0380016707.01.T01:CDS
GCTGAGCTCTGGAAATGTAA+AGG 0.564072 3:-86873501 MsG0380016707.01.T01:CDS
CAAGCCTTATCCCACTAAGT+GGG 0.565284 3:+86878653 None:intergenic
TCTAAGGTTGAGTCAACGAA+TGG 0.570762 3:-86873626 MsG0380016707.01.T01:intron
GCGGTAAGAATAGACGAGAT+AGG 0.575973 3:-86878955 MsG0380016707.01.T01:five_prime_UTR
AGTTTGCATTTGGTAATAGG+TGG 0.578245 3:+86872914 None:intergenic
GAAGGCGGCGGCTTTGATGT+CGG 0.582681 3:+86879970 None:intergenic
GCTCCTTGCGGCTGGATGAG+CGG 0.584403 3:-86878974 MsG0380016707.01.T01:five_prime_UTR
GCTCATCCAGCCGCAAGGAG+CGG 0.586539 3:+86878976 None:intergenic
CTGATCAATTTAAGTGTGGT+CGG 0.587454 3:-86872953 MsG0380016707.01.T01:CDS
TATTCGTGTGGCAGTGACAG+TGG 0.587816 3:-86873231 MsG0380016707.01.T01:CDS
GCTTTGTTCGACTGTGAGCG+TGG 0.588912 3:-86872996 MsG0380016707.01.T01:CDS
CAGAAATGGCTAGTGAGCAA+AGG 0.590372 3:-86873049 MsG0380016707.01.T01:CDS
AGACCTTAGCTAAAGCATCT+CGG 0.591289 3:+86873303 None:intergenic
AATGGGGAGAGAGCTAAAGC+TGG 0.591506 3:-86873608 MsG0380016707.01.T01:CDS
GTGTTAACTGCAACAACCGT+TGG 0.591905 3:-86872854 MsG0380016707.01.T01:CDS
GCAGAAGAGTCCTTCAGTGA+AGG 0.594554 3:-86873579 MsG0380016707.01.T01:CDS
AAATGTAAAGGCACAAAATG+TGG 0.596450 3:-86873489 MsG0380016707.01.T01:CDS
TTCGCTGGGACTATCATCGG+TGG 0.598548 3:+86875428 None:intergenic
GAGCCCAAAAGGTCAAGTAT+AGG 0.599758 3:-86873172 MsG0380016707.01.T01:CDS
CAAAATTCTCGTCAATACCC+AGG 0.608507 3:-86875352 MsG0380016707.01.T01:intron
CTTATCCCACTAAGTGGGGT+CGG 0.608874 3:+86878658 None:intergenic
ACACCATCAGGGAGAGAGTG+GGG 0.609036 3:-86878922 MsG0380016707.01.T01:five_prime_UTR
ACCGGCGGTGACGCCCCAGA+AGG 0.611780 3:+86879952 None:intergenic
GAAAGGAGAAAGTGCCAAGG+TGG 0.613295 3:-86873552 MsG0380016707.01.T01:CDS
GCTGGGACTATCATCGGTGG+AGG 0.613512 3:+86875431 None:intergenic
GACACCATCAGGGAGAGAGT+GGG 0.616118 3:-86878923 MsG0380016707.01.T01:five_prime_UTR
GTTTATAAACCCGCTCCTTG+CGG 0.619017 3:-86878986 MsG0380016707.01.T01:five_prime_UTR
ATGGGGAGAGAGCTAAAGCT+GGG 0.620446 3:-86873607 MsG0380016707.01.T01:CDS
AGTGTGGTCGGTGTGGACAA+AGG 0.621667 3:-86872941 MsG0380016707.01.T01:CDS
TTTAGCTAAGGTCTTTGAAG+AGG 0.626494 3:-86873294 MsG0380016707.01.T01:CDS
CAATTTAAGTGTGGTCGGTG+TGG 0.627337 3:-86872948 MsG0380016707.01.T01:CDS
TCAAACATGAGGATGAAGAG+CGG 0.629987 3:-86879018 MsG0380016707.01.T01:five_prime_UTR
TTACCGCTCATCCAGCCGCA+AGG 0.631723 3:+86878971 None:intergenic
TACCTCGAACATCAAAGCGA+AGG 0.634021 3:-86873441 MsG0380016707.01.T01:CDS
GTAAAGAGCGCCAGTACCGG+CGG 0.638288 3:+86879937 None:intergenic
CTCGAACATCAAAGCGAAGG+AGG 0.641252 3:-86873438 MsG0380016707.01.T01:CDS
CACCATCAGGGAGAGAGTGG+GGG 0.646043 3:-86878921 MsG0380016707.01.T01:five_prime_UTR
ACTACTGATCAATTTAAGTG+TGG 0.648979 3:-86872957 MsG0380016707.01.T01:CDS
GTACGAAGCCGCGAAGAAAG+CGG 0.650598 3:-86875466 MsG0380016707.01.T01:CDS
GATTAGGAATGACACCATCA+GGG 0.654678 3:-86878933 MsG0380016707.01.T01:five_prime_UTR
TGAGAAAGGAGAAAGTGCCA+AGG 0.657225 3:-86873555 MsG0380016707.01.T01:CDS
AGTACTAACAAAACTTCCAA+CGG 0.659265 3:+86872838 None:intergenic
TAAGGTTGAGTCAACGAATG+GGG 0.661593 3:-86873624 MsG0380016707.01.T01:intron
GCATCCCGACTTCAAACATG+AGG 0.662035 3:-86879029 MsG0380016707.01.T01:five_prime_UTR
AAGCCTTATCCCACTAAGTG+GGG 0.671687 3:+86878654 None:intergenic
CATTTCTGCTGAGCTCATGA+CGG 0.685355 3:+86873064 None:intergenic
CGAAGCCGCGAAGAAAGCGG+CGG 0.685814 3:-86875463 MsG0380016707.01.T01:CDS
TCCGTATTATTTGAAAACTG+GGG 0.694223 3:-86873206 MsG0380016707.01.T01:CDS
TGCATGTGACCCTATTCGTG+TGG 0.704457 3:-86873243 MsG0380016707.01.T01:CDS
TGAGCTGTTCAAGCGCATCG+AGG 0.741948 3:+86875394 None:intergenic
TAGAGATGGATACCTGAACG+AGG 0.767501 3:+86879915 None:intergenic
TTGGTACTGTTGAGCCACAG+CGG 0.773544 3:-86873091 MsG0380016707.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAGTTTAAATGAA+AGG + Chr3:86876271-86876290 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAAGAAA+TGG - Chr3:86876224-86876243 MsG0380016707.01.T01:intron 10.0%
!!! AAAAAAAAAATACAAGATTT+TGG + Chr3:86878154-86878173 None:intergenic 10.0%
!!! CATATAGTTTTTTATAAATA+CGG - Chr3:86876522-86876541 MsG0380016707.01.T01:intron 10.0%
!!! CATTTCTTTTTTTTTTTTTT+TGG + Chr3:86876226-86876245 None:intergenic 10.0%
!! AAAAATATTGCTATGAAATA+TGG + Chr3:86878543-86878562 None:intergenic 15.0%
!! ATGATACATAATATAAACAA+CGG + Chr3:86877150-86877169 None:intergenic 15.0%
!! TAAAAAAGAATATTGAGAAT+CGG + Chr3:86873003-86873022 None:intergenic 15.0%
!! TATTATGCTATATATAAGAA+TGG + Chr3:86874704-86874723 None:intergenic 15.0%
!! TCCAATAAAAGTTTATTATT+TGG - Chr3:86876603-86876622 MsG0380016707.01.T01:intron 15.0%
!! TGTTTGATATATTTAATCAA+TGG - Chr3:86873512-86873531 MsG0380016707.01.T01:CDS 15.0%
!! TTGTATTACATTAATACATT+TGG + Chr3:86875127-86875146 None:intergenic 15.0%
!!! ACACTGATTTTTTTTTTTTT+TGG - Chr3:86873441-86873460 MsG0380016707.01.T01:CDS 15.0%
!!! ACCAAATAATAAACTTTTAT+TGG + Chr3:86876607-86876626 None:intergenic 15.0%
!!! ATATATTAAAACTGAAGTTT+TGG + Chr3:86876458-86876477 None:intergenic 15.0%
!!! CACTGATTTTTTTTTTTTTT+GGG - Chr3:86873442-86873461 MsG0380016707.01.T01:CDS 15.0%
!!! CTTTTATTAAGTATCATATA+TGG - Chr3:86875338-86875357 MsG0380016707.01.T01:intron 15.0%
!!! GATTTAAAAAGAATTTTAAG+TGG + Chr3:86875747-86875766 None:intergenic 15.0%
!!! TTATAGATAGACTAATTTTT+TGG + Chr3:86876872-86876891 None:intergenic 15.0%
!!! TTTCCAACTTATTTTTTAAA+GGG + Chr3:86876942-86876961 None:intergenic 15.0%
!!! TTTTTTTGAGAGATTTTAAA+GGG + Chr3:86876907-86876926 None:intergenic 15.0%
!!! TTTTTTTTGAGAGATTTTAA+AGG + Chr3:86876908-86876927 None:intergenic 15.0%
!! AAAAGAAATAGAGATAGTTA+AGG - Chr3:86878994-86879013 MsG0380016707.01.T01:five_prime_UTR 20.0%
!! AAAGAAATAGAGATAGTTAA+GGG - Chr3:86878995-86879014 MsG0380016707.01.T01:five_prime_UTR 20.0%
!! AAATAATACTTTACTTGATG+TGG - Chr3:86876041-86876060 MsG0380016707.01.T01:intron 20.0%
!! AAATCAGAAAAAACTATAAC+GGG + Chr3:86878389-86878408 None:intergenic 20.0%
!! AATACTAGTTCATAGTTTAT+TGG - Chr3:86878593-86878612 MsG0380016707.01.T01:intron 20.0%
!! ATAATTTATGTCAAAATCTC+TGG + Chr3:86875653-86875672 None:intergenic 20.0%
!! ATAGAAAAAACTGTAGTATT+TGG - Chr3:86878962-86878981 MsG0380016707.01.T01:five_prime_UTR 20.0%
!! ATCCTTAAGATTAAACATTA+AGG + Chr3:86879731-86879750 None:intergenic 20.0%
!! ATTAGTAAAAAGATGAAAAG+TGG - Chr3:86877007-86877026 MsG0380016707.01.T01:intron 20.0%
!! ATTTGTTTAGAAATATCTGT+AGG + Chr3:86878505-86878524 None:intergenic 20.0%
!! CAAATCAGAAAAAACTATAA+CGG + Chr3:86878390-86878409 None:intergenic 20.0%
!! GAATAGAAAAATAATAACCT+GGG + Chr3:86877544-86877563 None:intergenic 20.0%
!! GAGTTATAGATTTGTAAATT+TGG - Chr3:86877775-86877794 MsG0380016707.01.T01:intron 20.0%
!! TAAGATTATATCTGATGTTA+AGG - Chr3:86873041-86873060 MsG0380016707.01.T01:CDS 20.0%
!! TATATATATACTCCAGAATA+TGG + Chr3:86873188-86873207 None:intergenic 20.0%
!! TATTATAGAGTATAGTATTG+CGG + Chr3:86876817-86876836 None:intergenic 20.0%
!! TCTTATATATAGCATAATAG+AGG - Chr3:86874705-86874724 MsG0380016707.01.T01:intron 20.0%
!! TGAATAGAAAAATAATAACC+TGG + Chr3:86877545-86877564 None:intergenic 20.0%
!! TGTCTTTACATGATATTAAA+GGG + Chr3:86876748-86876767 None:intergenic 20.0%
!! TTGTCTTTACATGATATTAA+AGG + Chr3:86876749-86876768 None:intergenic 20.0%
!! TTTGTAAATATTGAACTTTC+TGG - Chr3:86873547-86873566 MsG0380016707.01.T01:CDS 20.0%
!! TTTGTTTAGAAATATCTGTA+GGG + Chr3:86878504-86878523 None:intergenic 20.0%
!!! AAAAAGTACTATTGTTGAAT+TGG + Chr3:86876107-86876126 None:intergenic 20.0%
!!! AAAATTCTTTTTAAATCCCT+TGG - Chr3:86875750-86875769 MsG0380016707.01.T01:intron 20.0%
!!! AATCAAAATTTGTTGAAACT+TGG + Chr3:86873671-86873690 None:intergenic 20.0%
!!! ATACCCTTTAAAAAATAAGT+TGG - Chr3:86876936-86876955 MsG0380016707.01.T01:intron 20.0%
!!! GTTTCCAACTTATTTTTTAA+AGG + Chr3:86876943-86876962 None:intergenic 20.0%
!!! GTTTTGTTTTTGGTTAAATT+GGG - Chr3:86877822-86877841 MsG0380016707.01.T01:intron 20.0%
!!! TAAAAAGAATTTTAAGTGGA+TGG + Chr3:86875743-86875762 None:intergenic 20.0%
!!! TCAAATCTTTACTTTTTTCA+TGG - Chr3:86879033-86879052 MsG0380016707.01.T01:five_prime_UTR 20.0%
!!! TCAATTTTAGGTTTTGTTTT+TGG - Chr3:86877812-86877831 MsG0380016707.01.T01:intron 20.0%
!!! TGATTTTTTTTTTTTTTGGG+TGG - Chr3:86873445-86873464 MsG0380016707.01.T01:CDS 20.0%
!!! TGTTTTTAACGTTTTTTGTA+TGG - Chr3:86877322-86877341 MsG0380016707.01.T01:intron 20.0%
!!! TTCTTTTGACTTTAACTTAT+TGG - Chr3:86873231-86873250 MsG0380016707.01.T01:CDS 20.0%
!!! TTTCTGATTTGAATAGATTT+TGG - Chr3:86878399-86878418 MsG0380016707.01.T01:intron 20.0%
!!! TTTGCATCATTTAAGATTAA+TGG - Chr3:86873485-86873504 MsG0380016707.01.T01:CDS 20.0%
!!! TTTTTTATTTGTCCATATTC+TGG - Chr3:86873173-86873192 MsG0380016707.01.T01:CDS 20.0%
! AAAAATATTTGTGAGGTGAA+TGG + Chr3:86876792-86876811 None:intergenic 25.0%
! AAACAAGTAAAATAAGAACG+GGG - Chr3:86879219-86879238 MsG0380016707.01.T01:intron 25.0%
! AACAACCTATTTATTAAGCA+AGG + Chr3:86878764-86878783 None:intergenic 25.0%
! AACTATGAACTAGTATTTCA+CGG + Chr3:86878590-86878609 None:intergenic 25.0%
! AATATTGAGAATCGGAATTA+TGG + Chr3:86872995-86873014 None:intergenic 25.0%
! ACGTATGTATAAAGTAGAAA+TGG - Chr3:86876188-86876207 MsG0380016707.01.T01:intron 25.0%
! CAACTGGCTAATTTAAATTA+CGG + Chr3:86877971-86877990 None:intergenic 25.0%
! GAAACAAGTAAAATAAGAAC+GGG - Chr3:86879218-86879237 MsG0380016707.01.T01:intron 25.0%
! GGAAACAAGTAAAATAAGAA+CGG - Chr3:86879217-86879236 MsG0380016707.01.T01:intron 25.0%
! GGAAGAACTTTACTTAAAAA+GGG + Chr3:86875824-86875843 None:intergenic 25.0%
! GTAATTGAAAAACATGTACT+CGG - Chr3:86874624-86874643 MsG0380016707.01.T01:intron 25.0%
! GTCCTTAATGTTTAATCTTA+AGG - Chr3:86879726-86879745 MsG0380016707.01.T01:intron 25.0%
! GTTCTATCATAAATCATGTT+TGG + Chr3:86874172-86874191 None:intergenic 25.0%
! TAATTGAAAAACATGTACTC+GGG - Chr3:86874625-86874644 MsG0380016707.01.T01:intron 25.0%
! TCAATTTCATTGAACATTTG+TGG + Chr3:86873265-86873284 None:intergenic 25.0%
! TGATTTATGATAGAACACTA+TGG - Chr3:86874176-86874195 MsG0380016707.01.T01:intron 25.0%
! TGTATCCTTGCTTAATAAAT+AGG - Chr3:86878756-86878775 MsG0380016707.01.T01:five_prime_UTR 25.0%
! TTTGCATGTTATAGTTGTTA+GGG - Chr3:86877654-86877673 MsG0380016707.01.T01:intron 25.0%
!! AAAAAAGAAATGGTGAGTTT+TGG - Chr3:86876234-86876253 MsG0380016707.01.T01:intron 25.0%
!! AGAAGAGTGATTTGAATTTT+TGG - Chr3:86875501-86875520 MsG0380016707.01.T01:CDS 25.0%
!! ATTTTCTGATGTAATCTTTC+AGG - Chr3:86879097-86879116 MsG0380016707.01.T01:five_prime_UTR 25.0%
!! GGTGAATGGAAAAATATTTT+AGG + Chr3:86876778-86876797 None:intergenic 25.0%
!! GTAAAGATTTGAGATCAATT+TGG + Chr3:86879025-86879044 None:intergenic 25.0%
!! GTAGAATAAAAAAGAAGCAT+TGG + Chr3:86876085-86876104 None:intergenic 25.0%
!! TCTATTCACATTGCAAATTT+TGG - Chr3:86877557-86877576 MsG0380016707.01.T01:intron 25.0%
!! TTCAATAGTCTCTGTTTTAT+TGG - Chr3:86875185-86875204 MsG0380016707.01.T01:intron 25.0%
!! TTTTGCATGTTATAGTTGTT+AGG - Chr3:86877653-86877672 MsG0380016707.01.T01:intron 25.0%
!! TTTTGCTTCTAATAAACGTA+AGG + Chr3:86876022-86876041 None:intergenic 25.0%
!!! ACAGTTTTTTCTATCTAGTT+TGG + Chr3:86878956-86878975 None:intergenic 25.0%
!!! ATTAAAACTGAAGTTTTGGA+AGG + Chr3:86876454-86876473 None:intergenic 25.0%
!!! ATTTCCTTTTTCCTATTTCT+TGG - Chr3:86874463-86874482 MsG0380016707.01.T01:intron 25.0%
!!! GGTTTTGTTTTTGGTTAAAT+TGG - Chr3:86877821-86877840 MsG0380016707.01.T01:intron 25.0%
!!! GTTTCAATTTATTTTTCCTC+AGG + Chr3:86875478-86875497 None:intergenic 25.0%
!!! TACTTGTTTCTGATATTATG+TGG - Chr3:86875583-86875602 MsG0380016707.01.T01:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - Chr3:86873990-86874009 MsG0380016707.01.T01:intron 25.0%
!!! TTTCCTTTTTCCTATTTCTT+GGG - Chr3:86874464-86874483 MsG0380016707.01.T01:intron 25.0%
!!! TTTTAAGTGGATGGATTTAA+AGG + Chr3:86875734-86875753 None:intergenic 25.0%
!!! TTTTTAATTCTTTGATGACG+TGG - Chr3:86878171-86878190 MsG0380016707.01.T01:intron 25.0%
!!! TTTTTTGTTTGTGATGTTGA+TGG - Chr3:86873619-86873638 MsG0380016707.01.T01:CDS 25.0%
!!! TTTTTTTTGAGCTGAATTAC+CGG - Chr3:86877039-86877058 MsG0380016707.01.T01:intron 25.0%
AAAAAGGAAATAGTCAACGA+TGG + Chr3:86874454-86874473 None:intergenic 30.0%
AAAATAGGCTTAGATGGTTT+GGG - Chr3:86874005-86874024 MsG0380016707.01.T01:intron 30.0%
AAATAGAATGCTTTCATGAG+AGG - Chr3:86875153-86875172 MsG0380016707.01.T01:intron 30.0%
AAATGAGAATAGAAGAAGGA+AGG + Chr3:86874847-86874866 None:intergenic 30.0%
AACTCGTTCAAGAGATATAT+TGG + Chr3:86875689-86875708 None:intergenic 30.0%
AATGAAACCAATCCTAACTT+TGG + Chr3:86878324-86878343 None:intergenic 30.0%
AATTAAATTAGCACATTGCG+TGG - Chr3:86877868-86877887 MsG0380016707.01.T01:intron 30.0%
AATTGAAAAACATGTACTCG+GGG - Chr3:86874626-86874645 MsG0380016707.01.T01:intron 30.0%
ACCACAAATAACATTATCCT+TGG + Chr3:86878273-86878292 None:intergenic 30.0%
ACTACTGATCAATTTAAGTG+TGG - Chr3:86879919-86879938 MsG0380016707.01.T01:intron 30.0%
ACTATGAACTAGTATTTCAC+GGG + Chr3:86878589-86878608 None:intergenic 30.0%
AGAGAAATGAGAATAGAAGA+AGG + Chr3:86874851-86874870 None:intergenic 30.0%
AGATAAATGTCTGTTATGTG+AGG + Chr3:86876166-86876185 None:intergenic 30.0%
AGTCCGTATTATTTGAAAAC+TGG - Chr3:86879668-86879687 MsG0380016707.01.T01:intron 30.0%
ATGAAAATCGTAACAAGTAC+AGG + Chr3:86879064-86879083 None:intergenic 30.0%
ATGGAAAGACGTAATTATCA+AGG - Chr3:86879196-86879215 MsG0380016707.01.T01:intron 30.0%
ATGTTGAGTAAAAAGAGGAT+GGG + Chr3:86874571-86874590 None:intergenic 30.0%
ATTTAAATTAGCCAGTTGCA+TGG - Chr3:86877973-86877992 MsG0380016707.01.T01:intron 30.0%
ATTTCTTGGGTTAACCAAAA+AGG - Chr3:86874477-86874496 MsG0380016707.01.T01:intron 30.0%
CATCAGATATAATCTTACGA+AGG + Chr3:86873038-86873057 None:intergenic 30.0%
GAAAATCCAAAACATATACC+CGG + Chr3:86878031-86878050 None:intergenic 30.0%
GAACTTATTGAAACTGGAAT+GGG - Chr3:86878442-86878461 MsG0380016707.01.T01:intron 30.0%
GATTTGACATTTGGGAAAAA+TGG - Chr3:86872850-86872869 MsG0380016707.01.T01:CDS 30.0%
GGAAATCAACTCTTAATGTT+TGG - Chr3:86878420-86878439 MsG0380016707.01.T01:intron 30.0%
GGGAAGAACTTTACTTAAAA+AGG + Chr3:86875825-86875844 None:intergenic 30.0%
GTCCGTATTATTTGAAAACT+GGG - Chr3:86879669-86879688 MsG0380016707.01.T01:intron 30.0%
TAACCCAAGAAATAGGAAAA+AGG + Chr3:86874470-86874489 None:intergenic 30.0%
TAACTGAAAAACCTGATTGT+AGG - Chr3:86875968-86875987 MsG0380016707.01.T01:intron 30.0%
TATAAGAGAAACCGTTAGAA+AGG - Chr3:86874123-86874142 MsG0380016707.01.T01:intron 30.0%
TATATCGAACTTTCTAGATC+CGG + Chr3:86877061-86877080 None:intergenic 30.0%
TATCATTGTTGTCGTTATCT+TGG - Chr3:86878238-86878257 MsG0380016707.01.T01:intron 30.0%
TATCTGTATAACCTTACTCA+AGG - Chr3:86875053-86875072 MsG0380016707.01.T01:intron 30.0%
TATCTTGGAATTTATGACCA+AGG - Chr3:86878253-86878272 MsG0380016707.01.T01:intron 30.0%
TATGAAATATGGAGAGGATA+CGG + Chr3:86878532-86878551 None:intergenic 30.0%
TATTGCTATGAAATATGGAG+AGG + Chr3:86878538-86878557 None:intergenic 30.0%
TATTGTATCGTAATTGAGTC+CGG - Chr3:86878009-86878028 MsG0380016707.01.T01:intron 30.0%
TCCGTATTATTTGAAAACTG+GGG - Chr3:86879670-86879689 MsG0380016707.01.T01:intron 30.0%
TGCGGTAAAAAATATTTGTG+AGG + Chr3:86876799-86876818 None:intergenic 30.0%
TTAACATCAACAGAAACTCA+GGG + Chr3:86877849-86877868 None:intergenic 30.0%
TTTAACATCAACAGAAACTC+AGG + Chr3:86877850-86877869 None:intergenic 30.0%
! AAATGTAAAGGCACAAAATG+TGG - Chr3:86879387-86879406 MsG0380016707.01.T01:intron 30.0%
! AACTGTAGTATTTGGAATTC+AGG - Chr3:86878970-86878989 MsG0380016707.01.T01:five_prime_UTR 30.0%
! AATTGATCAGTAGTAGCTTT+TGG + Chr3:86879913-86879932 None:intergenic 30.0%
! ACCAAGGATAATGTTATTTG+TGG - Chr3:86878269-86878288 MsG0380016707.01.T01:intron 30.0%
! ACCCCAGTTTTCAAATAATA+CGG + Chr3:86879674-86879693 None:intergenic 30.0%
! ACGAGAATTTTGTAATTGAC+CGG + Chr3:86877516-86877535 None:intergenic 30.0%
! ACGTCTTTTTACTCTTCAAA+GGG + Chr3:86876965-86876984 None:intergenic 30.0%
! ACTGTAGTATTTGGAATTCA+GGG - Chr3:86878971-86878990 MsG0380016707.01.T01:five_prime_UTR 30.0%
! AGTTATGTTGGTCGTATTTT+TGG + Chr3:86875953-86875972 None:intergenic 30.0%
! ATAGTTTATTGGTCTGATTG+TGG - Chr3:86878604-86878623 MsG0380016707.01.T01:intron 30.0%
! ATTTTCCAAAAGATGGATAC+GGG - Chr3:86878045-86878064 MsG0380016707.01.T01:intron 30.0%
! GATTTTCCAAAAGATGGATA+CGG - Chr3:86878044-86878063 MsG0380016707.01.T01:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + Chr3:86873986-86874005 None:intergenic 30.0%
! TGTTTGGAACTTATTGAAAC+TGG - Chr3:86878436-86878455 MsG0380016707.01.T01:intron 30.0%
! TTAATCATCCTTTGCTATCT+GGG - Chr3:86875254-86875273 MsG0380016707.01.T01:intron 30.0%
!! ATCAGGTTTTTCAGTTATGT+TGG + Chr3:86875965-86875984 None:intergenic 30.0%
!! CATGAAAGCATTCTATTTGA+AGG + Chr3:86875151-86875170 None:intergenic 30.0%
!! GTTTTGGATTTTCCAAAAGA+TGG - Chr3:86878038-86878057 MsG0380016707.01.T01:intron 30.0%
!! TACCAATTTATCTCTGAAAC+TGG + Chr3:86878896-86878915 None:intergenic 30.0%
!! TTAATTTTAATGCTGTCCAC+TGG - Chr3:86875618-86875637 MsG0380016707.01.T01:intron 30.0%
!! TTGTTTCTGATATTATGTGG+TGG - Chr3:86875586-86875605 MsG0380016707.01.T01:intron 30.0%
!! TTTTGGTTAACCCAAGAAAT+AGG + Chr3:86874477-86874496 None:intergenic 30.0%
!!! ATAGGTTTTGGATTTTGCAA+AGG - Chr3:86877927-86877946 MsG0380016707.01.T01:intron 30.0%
AAACAAGAGAAAAGGACCTA+AGG + Chr3:86877182-86877201 None:intergenic 35.0%
AAACATAGGCATGAATTGAG+AGG + Chr3:86874422-86874441 None:intergenic 35.0%
AAATGACAGCTAGTTGTGTT+TGG - Chr3:86878293-86878312 MsG0380016707.01.T01:intron 35.0%
AACCGTTAGAAAGGATTTAG+AGG - Chr3:86874132-86874151 MsG0380016707.01.T01:intron 35.0%
AAGAGATATATTGGAAGACG+AGG + Chr3:86875680-86875699 None:intergenic 35.0%
AGAATAGACGAGATAGGATT+AGG - Chr3:86873927-86873946 MsG0380016707.01.T01:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - Chr3:86873979-86873998 MsG0380016707.01.T01:intron 35.0%
AGCATATACCTCAGTAAGAA+GGG - Chr3:86875012-86875031 MsG0380016707.01.T01:intron 35.0%
AGCCACAAAAACCAAAAAAG+CGG + Chr3:86878652-86878671 None:intergenic 35.0%
AGGTATATGCTACAAGGAAA+GGG + Chr3:86875003-86875022 None:intergenic 35.0%
AGTGCATGTTGAGTAAAAAG+AGG + Chr3:86874576-86874595 None:intergenic 35.0%
ATAAACGTAAGGACATCAGT+AGG + Chr3:86876011-86876030 None:intergenic 35.0%
ATAGAACACAATCGAATGTG+AGG + Chr3:86873093-86873112 None:intergenic 35.0%
ATGAATTGAGAGGAAAAGTG+AGG + Chr3:86874412-86874431 None:intergenic 35.0%
ATGCACTATTCCTATCTAAC+GGG - Chr3:86874589-86874608 MsG0380016707.01.T01:intron 35.0%
ATTGCTCAGAAAAAACACTC+GGG - Chr3:86874760-86874779 MsG0380016707.01.T01:intron 35.0%
ATTGTATCGTAATTGAGTCC+GGG - Chr3:86878010-86878029 MsG0380016707.01.T01:intron 35.0%
CAAGTTCATATGATCCAATC+CGG + Chr3:86874521-86874540 None:intergenic 35.0%
CACATTGCGTGGATATATAT+GGG - Chr3:86877879-86877898 MsG0380016707.01.T01:intron 35.0%
CAGAGATTTGATATTCAGAG+TGG + Chr3:86877270-86877289 None:intergenic 35.0%
CATCTTCATGTTGTTAAGTC+CGG + Chr3:86874929-86874948 None:intergenic 35.0%
CATGCACTATTCCTATCTAA+CGG - Chr3:86874588-86874607 MsG0380016707.01.T01:intron 35.0%
CATGTTGAGTAAAAAGAGGA+TGG + Chr3:86874572-86874591 None:intergenic 35.0%
CATTGCTCAGAAAAAACACT+CGG - Chr3:86874759-86874778 MsG0380016707.01.T01:intron 35.0%
CCATAAGCAAGGTTCATAAA+TGG + Chr3:86878681-86878700 None:intergenic 35.0%
CCATTTATGAACCTTGCTTA+TGG - Chr3:86878678-86878697 MsG0380016707.01.T01:five_prime_UTR 35.0%
CTGATCAATTTAAGTGTGGT+CGG - Chr3:86879923-86879942 MsG0380016707.01.T01:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - Chr3:86874004-86874023 MsG0380016707.01.T01:intron 35.0%
GACCTCTAAATCCTTTCTAA+CGG + Chr3:86874137-86874156 None:intergenic 35.0%
GAGAAACGAAACAAGAGAAA+AGG + Chr3:86877190-86877209 None:intergenic 35.0%
GATCATATGAACTTGGCATT+CGG - Chr3:86874526-86874545 MsG0380016707.01.T01:intron 35.0%
GATGATCATTGTGTGTTAAC+TGG + Chr3:86877128-86877147 None:intergenic 35.0%
GATTCAGCAACAAGAAATTG+TGG + Chr3:86878734-86878753 None:intergenic 35.0%
GCATTCGAGATTTGACATTT+GGG - Chr3:86872842-86872861 MsG0380016707.01.T01:CDS 35.0%
GGAACTTATTGAAACTGGAA+TGG - Chr3:86878441-86878460 MsG0380016707.01.T01:intron 35.0%
GGATAGTTAATATTCCAGAG+TGG + Chr3:86874826-86874845 None:intergenic 35.0%
GGTGAAATCTATGACATGAT+AGG + Chr3:86873350-86873369 None:intergenic 35.0%
GTATCATCTCTTTCAACCTT+AGG - Chr3:86877163-86877182 MsG0380016707.01.T01:intron 35.0%
GTATCTATCAACCTACAATC+AGG + Chr3:86875982-86876001 None:intergenic 35.0%
GTGAGTATGCTTGTAAGAAA+AGG + Chr3:86878707-86878726 None:intergenic 35.0%
GTTGTTAGGGTTCAATTCAA+AGG - Chr3:86877667-86877686 MsG0380016707.01.T01:intron 35.0%
TAAATGTCTGTTATGTGAGG+CGG + Chr3:86876163-86876182 None:intergenic 35.0%
TAAGCATCTTCAGTGATCTT+GGG - Chr3:86875214-86875233 MsG0380016707.01.T01:intron 35.0%
TAAGGAAAGGGCTACATTAA+TGG - Chr3:86875099-86875118 MsG0380016707.01.T01:intron 35.0%
TAGCATATACCTCAGTAAGA+AGG - Chr3:86875011-86875030 MsG0380016707.01.T01:intron 35.0%
TAGGGTTCAATTCAAAGGAA+GGG - Chr3:86877672-86877691 MsG0380016707.01.T01:intron 35.0%
TGAATTGAGAGGAAAAGTGA+GGG + Chr3:86874411-86874430 None:intergenic 35.0%
TGCCAGTTTCAGAGATAAAT+TGG - Chr3:86878891-86878910 MsG0380016707.01.T01:five_prime_UTR 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - Chr3:86873999-86874018 MsG0380016707.01.T01:intron 35.0%
TGTAAGAAGAGTAGATCAGA+TGG - Chr3:86874057-86874076 MsG0380016707.01.T01:intron 35.0%
TGTTTGGATTCACCAAAGTT+AGG - Chr3:86878309-86878328 MsG0380016707.01.T01:intron 35.0%
TTAACCTAGTACTTCCAAAG+TGG + Chr3:86875862-86875881 None:intergenic 35.0%
TTAAGCATCTTCAGTGATCT+TGG - Chr3:86875213-86875232 MsG0380016707.01.T01:intron 35.0%
TTACTGAGGTATATGCTACA+AGG + Chr3:86875009-86875028 None:intergenic 35.0%
TTAGGGTTCAATTCAAAGGA+AGG - Chr3:86877671-86877690 MsG0380016707.01.T01:intron 35.0%
TTATGGAAGGAGAATAGAGA+TGG + Chr3:86872978-86872997 None:intergenic 35.0%
TTCTGATGTAATCTTTCAGG+TGG - Chr3:86879100-86879119 MsG0380016707.01.T01:five_prime_UTR 35.0%
TTGAGAATCGGAATTATGGA+AGG + Chr3:86872991-86873010 None:intergenic 35.0%
TTGATCATAGTCTTCAGCTT+TGG + Chr3:86879514-86879533 None:intergenic 35.0%
TTTAGCACCTGAAAGATACT+TGG + Chr3:86875918-86875937 None:intergenic 35.0%
! AAAAAGAGGGTACACACATA+AGG + Chr3:86874975-86874994 None:intergenic 35.0%
! AAAACTTTTCTCCGGAAATC+AGG + Chr3:86879763-86879782 None:intergenic 35.0%
! AAAAGAGGGTACACACATAA+GGG + Chr3:86874974-86874993 None:intergenic 35.0%
! AAACTTTTCTCCGGAAATCA+GGG + Chr3:86879762-86879781 None:intergenic 35.0%
! AGATTGTTTTCCCGTTAGAT+AGG + Chr3:86874602-86874621 None:intergenic 35.0%
! AGTTTGCATTTGGTAATAGG+TGG + Chr3:86879965-86879984 None:intergenic 35.0%
! ATTGAACCGTAATTGACTCT+GGG - Chr3:86877903-86877922 MsG0380016707.01.T01:intron 35.0%
! ATTTTGCAAAGGATGGATAC+GGG - Chr3:86877938-86877957 MsG0380016707.01.T01:intron 35.0%
! CACGTCTTTTTACTCTTCAA+AGG + Chr3:86876966-86876985 None:intergenic 35.0%
! CTGATATTATGTGGTGGTTT+TGG - Chr3:86875592-86875611 MsG0380016707.01.T01:intron 35.0%
! CTTAATCATCCTTTGCTATC+TGG - Chr3:86875253-86875272 MsG0380016707.01.T01:intron 35.0%
! GAAAAAACTATAACGGGATC+TGG + Chr3:86878383-86878402 None:intergenic 35.0%
! GATTTTGCAAAGGATGGATA+CGG - Chr3:86877937-86877956 MsG0380016707.01.T01:intron 35.0%
! TACCAAGCAAAACTTTTCTC+CGG + Chr3:86879771-86879790 None:intergenic 35.0%
! TATTGAACCGTAATTGACTC+TGG - Chr3:86877902-86877921 MsG0380016707.01.T01:intron 35.0%
! TCTGATGTAATCTTTCAGGT+GGG - Chr3:86879101-86879120 MsG0380016707.01.T01:five_prime_UTR 35.0%
! TGAACAGCTCAAGAATTTTC+CGG - Chr3:86877494-86877513 MsG0380016707.01.T01:intron 35.0%
! TTCATCCTCATGTTTGAAGT+CGG + Chr3:86873855-86873874 None:intergenic 35.0%
! TTGGTTGTTGTTGTTGTTGT+TGG - Chr3:86874243-86874262 MsG0380016707.01.T01:intron 35.0%
! TTTAGCTAAGGTCTTTGAAG+AGG - Chr3:86879582-86879601 MsG0380016707.01.T01:intron 35.0%
!! ATTTATTTTTCCTCAGGCTC+TGG + Chr3:86875472-86875491 None:intergenic 35.0%
!! CTGTTGACTTAATTGCGATA+TGG - Chr3:86879177-86879196 MsG0380016707.01.T01:intron 35.0%
!! GAGCTGTGTTGTTCAATTTT+AGG - Chr3:86877800-86877819 MsG0380016707.01.T01:intron 35.0%
!! GTTTTGGATTTTGCAAAGGA+TGG - Chr3:86877931-86877950 MsG0380016707.01.T01:intron 35.0%
!! TCAGTTCTAGACTACATGTA+AGG + Chr3:86874328-86874347 None:intergenic 35.0%
!!! AGTTCACTTTTTCTTTGTCG+GGG - Chr3:86878206-86878225 MsG0380016707.01.T01:intron 35.0%
!!! ATTCCTATTTTTTCGCTGAG+AGG + Chr3:86873756-86873775 None:intergenic 35.0%
!!! CAGTTCACTTTTTCTTTGTC+GGG - Chr3:86878205-86878224 MsG0380016707.01.T01:intron 35.0%
!!! GCAGTTCACTTTTTCTTTGT+CGG - Chr3:86878204-86878223 MsG0380016707.01.T01:intron 35.0%
!!! TACCGCTTTTTTGGTTTTTG+TGG - Chr3:86878647-86878666 MsG0380016707.01.T01:intron 35.0%
AAAAACATGTACTCGGGGAA+AGG - Chr3:86874631-86874650 MsG0380016707.01.T01:intron 40.0%
AAACGCAGAAGAAACACACT+TGG + Chr3:86875778-86875797 None:intergenic 40.0%
AAAGAGGTAGAGGAAGACTT+AGG - Chr3:86874095-86874114 MsG0380016707.01.T01:intron 40.0%
AAATATGGAGAGGATACGGT+AGG + Chr3:86878528-86878547 None:intergenic 40.0%
AAGAAACACACTTGGTTCCA+AGG + Chr3:86875770-86875789 None:intergenic 40.0%
AAGCATCTTCAGTGATCTTG+GGG - Chr3:86875215-86875234 MsG0380016707.01.T01:intron 40.0%
ACCAAAAAAGCGGTATAGTG+TGG + Chr3:86878642-86878661 None:intergenic 40.0%
AGAAAAGGAAGCCATAAGCA+AGG + Chr3:86878692-86878711 None:intergenic 40.0%
AGAAACACACTTGGTTCCAA+GGG + Chr3:86875769-86875788 None:intergenic 40.0%
AGAGGCAGATGAAGATATGA+TGG - Chr3:86879600-86879619 MsG0380016707.01.T01:intron 40.0%
ATAAGAATGGTAACTGCCCT+TGG + Chr3:86874691-86874710 None:intergenic 40.0%
ATATGCTACAAGGAAAGGGA+AGG + Chr3:86874999-86875018 None:intergenic 40.0%
ATCAGAAGAACCCTGATTTC+CGG - Chr3:86879749-86879768 MsG0380016707.01.T01:intron 40.0%
ATTCAGCGCGAGACAAAATA+AGG - Chr3:86879542-86879561 MsG0380016707.01.T01:intron 40.0%
CAAAATTCTCGTCAATACCC+AGG - Chr3:86877524-86877543 MsG0380016707.01.T01:intron 40.0%
CAAGTGACATAGGTTGTCAT+AGG + Chr3:86880003-86880022 None:intergenic 40.0%
CCAAGGTGGAGAAAGTTAAT+GGG - Chr3:86879338-86879357 MsG0380016707.01.T01:intron 40.0%
CCTATACCCAGAGTCAATTA+CGG + Chr3:86877912-86877931 None:intergenic 40.0%
CGAATGTGAGGATTCAAAGA+AGG + Chr3:86873081-86873100 None:intergenic 40.0%
CTAAGGTTGAGTCAACGAAT+GGG - Chr3:86879251-86879270 MsG0380016707.01.T01:intron 40.0%
CTTAAATCACCAACAGCCAT+GGG - Chr3:86875417-86875436 MsG0380016707.01.T01:CDS 40.0%
CTTCCTCTCAGCGAAAAAAT+AGG - Chr3:86873750-86873769 MsG0380016707.01.T01:intron 40.0%
GAAGGAGAAAGAGAAAGAGT+TGG - Chr3:86877380-86877399 MsG0380016707.01.T01:intron 40.0%
GAGGTATATGCTACAAGGAA+AGG + Chr3:86875004-86875023 None:intergenic 40.0%
GATTAGGAATGACACCATCA+GGG - Chr3:86873943-86873962 MsG0380016707.01.T01:intron 40.0%
GCACATTGCGTGGATATATA+TGG - Chr3:86877878-86877897 MsG0380016707.01.T01:intron 40.0%
GCAGTTAACACAAGTGACAT+AGG + Chr3:86880013-86880032 None:intergenic 40.0%
GGAAGAAAATGATAGAGACG+AGG - Chr3:86874726-86874745 MsG0380016707.01.T01:intron 40.0%
GGATTCACCAAAGTTAGGAT+TGG - Chr3:86878314-86878333 MsG0380016707.01.T01:intron 40.0%
GGATTTAGAGGTCAATGAGT+TGG - Chr3:86874144-86874163 MsG0380016707.01.T01:intron 40.0%
GTAAGGAGGTCAGAATAGAA+AGG + Chr3:86874952-86874971 None:intergenic 40.0%
GTGGAGAAAGTTAATGGGAA+TGG - Chr3:86879343-86879362 MsG0380016707.01.T01:intron 40.0%
GTGGATTCAATGAACATCAC+AGG + Chr3:86873288-86873307 None:intergenic 40.0%
GTTGTGTTGTGTGTGAAACT+AGG + Chr3:86877084-86877103 None:intergenic 40.0%
GTTTCTTTGGCTGTTATCCT+TGG + Chr3:86874666-86874685 None:intergenic 40.0%
TAAGGTTGAGTCAACGAATG+GGG - Chr3:86879252-86879271 MsG0380016707.01.T01:intron 40.0%
TAGAATGCTTTCATGAGAGG+TGG - Chr3:86875156-86875175 MsG0380016707.01.T01:intron 40.0%
TATCCTGATATCCATGCAAC+TGG + Chr3:86877987-86878006 None:intergenic 40.0%
TATGCTACAAGGAAAGGGAA+GGG + Chr3:86874998-86875017 None:intergenic 40.0%
TCAAACATGAGGATGAAGAG+CGG - Chr3:86873858-86873877 MsG0380016707.01.T01:intron 40.0%
TCAAGGATAAAGCCACACAT+TGG - Chr3:86875070-86875089 MsG0380016707.01.T01:intron 40.0%
TGACATTTGGGAAAAATGGC+CGG - Chr3:86872854-86872873 MsG0380016707.01.T01:CDS 40.0%
TGACTCAACCTTAGAATCAG+AGG + Chr3:86879245-86879264 None:intergenic 40.0%
TGTGTGTTAACTGGATCAGA+CGG + Chr3:86877119-86877138 None:intergenic 40.0%
TTATGGTGTACCAAACATGC+TGG - Chr3:86873576-86873595 MsG0380016707.01.T01:CDS 40.0%
TTCAGCGCGAGACAAAATAA+GGG - Chr3:86879543-86879562 MsG0380016707.01.T01:intron 40.0%
TTGAATCCACAATCACGTGT+TGG - Chr3:86873298-86873317 MsG0380016707.01.T01:CDS 40.0%
! AAAGTGAGGGTTTAGGATAG+AGG + Chr3:86874398-86874417 None:intergenic 40.0%
! ACATTGGTAGCTGTAAGGAA+AGG - Chr3:86875086-86875105 MsG0380016707.01.T01:intron 40.0%
! AGACCTTAGCTAAAGCATCT+CGG + Chr3:86879576-86879595 None:intergenic 40.0%
! AGGACCTATACTTGACCTTT+TGG + Chr3:86879711-86879730 None:intergenic 40.0%
! ATCATAGTCTTCAGCTTTGG+TGG + Chr3:86879511-86879530 None:intergenic 40.0%
! ATTTTCTTTGCCGCAGATAC+TGG + Chr3:86879469-86879488 None:intergenic 40.0%
! CATTGGTAGCTGTAAGGAAA+GGG - Chr3:86875087-86875106 MsG0380016707.01.T01:intron 40.0%
! CGGATTGGATCATATGAACT+TGG - Chr3:86874519-86874538 MsG0380016707.01.T01:intron 40.0%
! GAACTTTCTGGTCTGCTTTA+TGG - Chr3:86873559-86873578 MsG0380016707.01.T01:CDS 40.0%
! GCGAGTTTGCATTTGGTAAT+AGG + Chr3:86879968-86879987 None:intergenic 40.0%
! GGACCTATACTTGACCTTTT+GGG + Chr3:86879710-86879729 None:intergenic 40.0%
! TCATCCTCATGTTTGAAGTC+GGG + Chr3:86873854-86873873 None:intergenic 40.0%
! TCTAAGGTTGAGTCAACGAA+TGG - Chr3:86879250-86879269 MsG0380016707.01.T01:intron 40.0%
! TTCATGCCTATGTTTCTACC+TGG - Chr3:86874427-86874446 MsG0380016707.01.T01:intron 40.0%
! TTCCGGAGAAAAGTTTTGCT+TGG - Chr3:86879766-86879785 MsG0380016707.01.T01:intron 40.0%
! TTGACTCTGGGTATAGGTTT+TGG - Chr3:86877915-86877934 MsG0380016707.01.T01:intron 40.0%
! TTGAGTCCGGGTATATGTTT+TGG - Chr3:86878022-86878041 MsG0380016707.01.T01:intron 40.0%
!! GTCTTTTTGAGCTCAGCATT+CGG - Chr3:86874896-86874915 MsG0380016707.01.T01:intron 40.0%
!! TGATCCACTTTGGAAGTACT+AGG - Chr3:86875855-86875874 MsG0380016707.01.T01:intron 40.0%
!! TGTGGCTTTATCCTTGAGTA+AGG + Chr3:86875067-86875086 None:intergenic 40.0%
!!! GTTCACTTTTTCTTTGTCGG+GGG - Chr3:86878207-86878226 MsG0380016707.01.T01:intron 40.0%
!!! TTCACTTTTTCTTTGTCGGG+GGG - Chr3:86878208-86878227 MsG0380016707.01.T01:intron 40.0%
AACAGCCAAAGAAACCACCA+AGG - Chr3:86874671-86874690 MsG0380016707.01.T01:intron 45.0%
AACATCCATGCCAGCATGTT+TGG + Chr3:86873589-86873608 None:intergenic 45.0%
ACAGCCAAAGAAACCACCAA+GGG - Chr3:86874672-86874691 MsG0380016707.01.T01:intron 45.0%
AGAGTGGAAACTCACGAGAA+TGG + Chr3:86877254-86877273 None:intergenic 45.0%
AGATCAGATGGAGAAGAGTC+AGG - Chr3:86874069-86874088 MsG0380016707.01.T01:intron 45.0%
AGCATCTTCAGTGATCTTGG+GGG - Chr3:86875216-86875235 MsG0380016707.01.T01:intron 45.0%
AGGAAAGGGAAGGGAAAAAG+AGG + Chr3:86874989-86875008 None:intergenic 45.0%
AGGGTACACACATAAGGGTA+AGG + Chr3:86874969-86874988 None:intergenic 45.0%
AGTCAGGTCAAAAGAGGTAG+AGG - Chr3:86874085-86874104 MsG0380016707.01.T01:intron 45.0%
CAAACATGAGGATGAAGAGC+GGG - Chr3:86873859-86873878 MsG0380016707.01.T01:intron 45.0%
CAATCTCCAACACGTGATTG+TGG + Chr3:86873307-86873326 None:intergenic 45.0%
CAATTTAAGTGTGGTCGGTG+TGG - Chr3:86879928-86879947 MsG0380016707.01.T01:five_prime_UTR 45.0%
CACAATCACGTGTTGGAGAT+TGG - Chr3:86873305-86873324 MsG0380016707.01.T01:CDS 45.0%
CAGAAATGGCTAGTGAGCAA+AGG - Chr3:86879827-86879846 MsG0380016707.01.T01:intron 45.0%
CATATGATCCAATCCGGCAA+TGG + Chr3:86874515-86874534 None:intergenic 45.0%
CATTTCTGCTGAGCTCATGA+CGG + Chr3:86879815-86879834 None:intergenic 45.0%
CCAAAAGATGGATACGGGTA+TGG - Chr3:86878050-86878069 MsG0380016707.01.T01:intron 45.0%
CCAACAATGTGCAGTGATCA+AGG + Chr3:86874786-86874805 None:intergenic 45.0%
CCCATTAACTTTCTCCACCT+TGG + Chr3:86879341-86879360 None:intergenic 45.0%
CCTACACTAACCCTCAGTAA+CGG + Chr3:86878078-86878097 None:intergenic 45.0%
CCTTCAGTGAAGGTTGAGAA+AGG - Chr3:86879307-86879326 MsG0380016707.01.T01:intron 45.0%
CCTTGATCACTGCACATTGT+TGG - Chr3:86874783-86874802 MsG0380016707.01.T01:intron 45.0%
CCTTTCTCAACCTTCACTGA+AGG + Chr3:86879310-86879329 None:intergenic 45.0%
CTAGACTACATGTAAGGAGC+TGG + Chr3:86874322-86874341 None:intergenic 45.0%
GAAAACTGGGGTCCTTCAAA+TGG - Chr3:86879682-86879701 MsG0380016707.01.T01:intron 45.0%
GAAATAGTCAACGATGGTCC+AGG + Chr3:86874448-86874467 None:intergenic 45.0%
GAGAAGAGTCAGGTCAAAAG+AGG - Chr3:86874079-86874098 MsG0380016707.01.T01:intron 45.0%
GAGAGGAAAAGTGAGGGTTT+AGG + Chr3:86874405-86874424 None:intergenic 45.0%
GAGCCCAAAAGGTCAAGTAT+AGG - Chr3:86879704-86879723 MsG0380016707.01.T01:intron 45.0%
GATGGTCCAGGTAGAAACAT+AGG + Chr3:86874436-86874455 None:intergenic 45.0%
GCCAAGGTGGAGAAAGTTAA+TGG - Chr3:86879337-86879356 MsG0380016707.01.T01:intron 45.0%
GCGGTAAGAATAGACGAGAT+AGG - Chr3:86873921-86873940 MsG0380016707.01.T01:intron 45.0%
GCTGAGCTCAAAAAGACTAG+TGG + Chr3:86874893-86874912 None:intergenic 45.0%
GCTTAAATCACCAACAGCCA+TGG - Chr3:86875416-86875435 MsG0380016707.01.T01:CDS 45.0%
GGAAAGGGAAGGGAAAAAGA+GGG + Chr3:86874988-86875007 None:intergenic 45.0%
GGAGGAAAAACCAGTATCTG+CGG - Chr3:86879456-86879475 MsG0380016707.01.T01:intron 45.0%
GGATTAGGAATGACACCATC+AGG - Chr3:86873942-86873961 MsG0380016707.01.T01:intron 45.0%
GGTCTACTAATGTTCCACTC+TGG - Chr3:86874809-86874828 MsG0380016707.01.T01:intron 45.0%
GTACACACATAAGGGTAAGG+AGG + Chr3:86874966-86874985 None:intergenic 45.0%
GTCTTCCTCAAAAAGTCCCA+TGG + Chr3:86875436-86875455 None:intergenic 45.0%
GTGTTAACTGCAACAACCGT+TGG - Chr3:86880022-86880041 MsG0380016707.01.T01:five_prime_UTR 45.0%
GTTTATAAACCCGCTCCTTG+CGG - Chr3:86873890-86873909 MsG0380016707.01.T01:intron 45.0%
TACCTCGAACATCAAAGCGA+AGG - Chr3:86879435-86879454 MsG0380016707.01.T01:intron 45.0%
TAGAGATGGATACCTGAACG+AGG + Chr3:86872964-86872983 None:intergenic 45.0%
TAGCCAGTTGCATGGATATC+AGG - Chr3:86877981-86878000 MsG0380016707.01.T01:intron 45.0%
TCAAAAAGTCCCATGGCTGT+TGG + Chr3:86875429-86875448 None:intergenic 45.0%
TCACCAACGCATAGATCTGT+GGG - Chr3:86873365-86873384 MsG0380016707.01.T01:CDS 45.0%
TCCTTACAGCTACCAATGTG+TGG + Chr3:86875085-86875104 None:intergenic 45.0%
TCCTTCAAATGGAGCCCAAA+AGG - Chr3:86879693-86879712 MsG0380016707.01.T01:intron 45.0%
TCGTGTAACAGAGAGTGGTT+GGG - Chr3:86877348-86877367 MsG0380016707.01.T01:intron 45.0%
TCTCCGAGATGCTTTAGCTA+AGG - Chr3:86879570-86879589 MsG0380016707.01.T01:intron 45.0%
TGTTAACTGGATCAGACGGT+TGG + Chr3:86877115-86877134 None:intergenic 45.0%
TTCACCAACGCATAGATCTG+TGG - Chr3:86873364-86873383 MsG0380016707.01.T01:CDS 45.0%
TTCCAAAGTGGATCACCTGT+GGG + Chr3:86875850-86875869 None:intergenic 45.0%
TTCGTGTAACAGAGAGTGGT+TGG - Chr3:86877347-86877366 MsG0380016707.01.T01:intron 45.0%
TTCTTCGCTGGGACTATCAT+CGG + Chr3:86877454-86877473 None:intergenic 45.0%
! AACAGCCATGGGACTTTTTG+AGG - Chr3:86875428-86875447 MsG0380016707.01.T01:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr3:86874225-86874244 None:intergenic 45.0%
! ACCTTTTGGGCTCCATTTGA+AGG + Chr3:86879697-86879716 None:intergenic 45.0%
! AGGATGAAGAGCGGGTTTAT+AGG - Chr3:86873867-86873886 MsG0380016707.01.T01:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr3:86874226-86874245 None:intergenic 45.0%
! CCATACCCGTATCCATCTTT+TGG + Chr3:86878053-86878072 None:intergenic 45.0%
! CCGTAATTGACTCTGGGTAT+AGG - Chr3:86877909-86877928 MsG0380016707.01.T01:intron 45.0%
! GGATGAAGAGCGGGTTTATA+GGG - Chr3:86873868-86873887 MsG0380016707.01.T01:intron 45.0%
! GGTTTTCGTGTAACAGAGAG+TGG - Chr3:86877343-86877362 MsG0380016707.01.T01:intron 45.0%
! GTTCTAGACCCTTCTTACTG+AGG + Chr3:86875023-86875042 None:intergenic 45.0%
! TCTGGGCACATGGCTTTTAA+TGG - Chr3:86875271-86875290 MsG0380016707.01.T01:intron 45.0%
!! CGTGTTGGAGATTGGCTTTA+TGG - Chr3:86873313-86873332 MsG0380016707.01.T01:CDS 45.0%
!! GCTGAGCTCTGGAAATGTAA+AGG - Chr3:86879375-86879394 MsG0380016707.01.T01:intron 45.0%
!! TGAGAAAGGAGAAAGTGCCA+AGG - Chr3:86879321-86879340 MsG0380016707.01.T01:intron 45.0%
!!! GCCACACTATACCGCTTTTT+TGG - Chr3:86878638-86878657 MsG0380016707.01.T01:intron 45.0%
!!! ATATATATTTTTTATAAAGA+CGG - Chr3:86876472-86876491 MsG0380016707.01.T01:intron 5.0%
AAAAGCCCGAATGTTCTCCC+TGG + Chr3:86879156-86879175 None:intergenic 50.0%
AAACTCTCACCAAGCATCCC+AGG - Chr3:86879135-86879154 MsG0380016707.01.T01:intron 50.0%
AAAGCCCGAATGTTCTCCCT+GGG + Chr3:86879155-86879174 None:intergenic 50.0%
AACTCTCACCAAGCATCCCA+GGG - Chr3:86879136-86879155 MsG0380016707.01.T01:intron 50.0%
AATGGGGAGAGAGCTAAAGC+TGG - Chr3:86879268-86879287 MsG0380016707.01.T01:intron 50.0%
AATGTTCTCCCTGGGATGCT+TGG + Chr3:86879147-86879166 None:intergenic 50.0%
ACGAAGCTTCGCAGGTAAAC+CGG + Chr3:86872876-86872895 None:intergenic 50.0%
ACTGTCACTGCCACACGAAT+AGG + Chr3:86879646-86879665 None:intergenic 50.0%
AGAATGGTAACTGCCCTTGG+TGG + Chr3:86874688-86874707 None:intergenic 50.0%
AGCATCCCAGGGAGAACATT+CGG - Chr3:86879147-86879166 MsG0380016707.01.T01:intron 50.0%
ATCACTGCACATTGTTGGCG+AGG - Chr3:86874788-86874807 MsG0380016707.01.T01:intron 50.0%
ATCCAATCCGGCAATGGTCA+GGG + Chr3:86874509-86874528 None:intergenic 50.0%
ATGGGGAGAGAGCTAAAGCT+GGG - Chr3:86879269-86879288 MsG0380016707.01.T01:intron 50.0%
ATGGTGCCTGTTGTGTTCTG+CGG + Chr3:86877235-86877254 None:intergenic 50.0%
CAGCACTGCGAGTTTGCATT+TGG + Chr3:86879975-86879994 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr3:86874224-86874243 MsG0380016707.01.T01:intron 50.0%
CGTCATGAGCTCAGCAGAAA+TGG - Chr3:86879813-86879832 MsG0380016707.01.T01:intron 50.0%
CTCCTTCGCTTTGATGTTCG+AGG + Chr3:86879440-86879459 None:intergenic 50.0%
CTCGAACATCAAAGCGAAGG+AGG - Chr3:86879438-86879457 MsG0380016707.01.T01:intron 50.0%
CTGTCACTGCCACACGAATA+GGG + Chr3:86879645-86879664 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr3:86874221-86874240 None:intergenic 50.0%
CTTCCAAAGTGGATCACCTG+TGG + Chr3:86875851-86875870 None:intergenic 50.0%
GCAAAGGATGGATACGGGTA+AGG - Chr3:86877943-86877962 MsG0380016707.01.T01:intron 50.0%
GCAGAAGAGTCCTTCAGTGA+AGG - Chr3:86879297-86879316 MsG0380016707.01.T01:intron 50.0%
GCAGACGCCAAGTATCTTTC+AGG - Chr3:86875908-86875927 MsG0380016707.01.T01:intron 50.0%
GCATCCCGACTTCAAACATG+AGG - Chr3:86873847-86873866 MsG0380016707.01.T01:intron 50.0%
GGTTCATCAAAGCTGAGCTC+TGG - Chr3:86879364-86879383 MsG0380016707.01.T01:intron 50.0%
GTGTACCAAACATGCTGGCA+TGG - Chr3:86873581-86873600 MsG0380016707.01.T01:CDS 50.0%
TAAAGTTCTTCCCAGCCCAC+AGG - Chr3:86875832-86875851 MsG0380016707.01.T01:intron 50.0%
TATTCGTGTGGCAGTGACAG+TGG - Chr3:86879645-86879664 MsG0380016707.01.T01:intron 50.0%
TCTCTGGCAAAAACAGCCAG+TGG + Chr3:86875637-86875656 None:intergenic 50.0%
TGCATGTGACCCTATTCGTG+TGG - Chr3:86879633-86879652 MsG0380016707.01.T01:intron 50.0%
TGGGCTGCGCATTCAAATGT+GGG + Chr3:86874552-86874571 None:intergenic 50.0%
TTGGTACTGTTGAGCCACAG+CGG - Chr3:86879785-86879804 MsG0380016707.01.T01:intron 50.0%
! ACTGCCCTTGGTGGTTTCTT+TGG + Chr3:86874679-86874698 None:intergenic 50.0%
! ATGGGCTGCGCATTCAAATG+TGG + Chr3:86874553-86874572 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr3:86874227-86874246 None:intergenic 50.0%
! CCGTTACTGAGGGTTAGTGT+AGG - Chr3:86878075-86878094 MsG0380016707.01.T01:intron 50.0%
! GCCACACATTGGTAGCTGTA+AGG - Chr3:86875081-86875100 MsG0380016707.01.T01:intron 50.0%
! GTGGCAAGTTCGAGTTCAGA+TGG + Chr3:86874874-86874893 None:intergenic 50.0%
! TCCTTTGCTATCTGGGCACA+TGG - Chr3:86875261-86875280 MsG0380016707.01.T01:intron 50.0%
!! GAAAGGAGAAAGTGCCAAGG+TGG - Chr3:86879324-86879343 MsG0380016707.01.T01:intron 50.0%
!! GCACTCTAGAGCACATGACA+GGG - Chr3:86875886-86875905 MsG0380016707.01.T01:intron 50.0%
!! TGCACTCTAGAGCACATGAC+AGG - Chr3:86875885-86875904 MsG0380016707.01.T01:intron 50.0%
AAAGTGGATCACCTGTGGGC+TGG + Chr3:86875846-86875865 None:intergenic 55.0%
AAGTGGATCACCTGTGGGCT+GGG + Chr3:86875845-86875864 None:intergenic 55.0%
AATCGAGCACGAAGCTTCGC+AGG + Chr3:86872884-86872903 None:intergenic 55.0%
ACACCATCAGGGAGAGAGTG+GGG - Chr3:86873954-86873973 MsG0380016707.01.T01:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + Chr3:86874213-86874232 None:intergenic 55.0%
AGCCCACAGGTGATCCACTT+TGG - Chr3:86875845-86875864 MsG0380016707.01.T01:intron 55.0%
AGTGTGGTCGGTGTGGACAA+AGG - Chr3:86879935-86879954 MsG0380016707.01.T01:five_prime_UTR 55.0%
ATGTAGCCGACCCCACTTAG+TGG - Chr3:86874212-86874231 MsG0380016707.01.T01:intron 55.0%
CAGAGAGTGGTTGGGTTCGA+TGG - Chr3:86877356-86877375 MsG0380016707.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr3:86874219-86874238 MsG0380016707.01.T01:intron 55.0%
CTCAGCATTCGGTCATGCTC+CGG - Chr3:86874907-86874926 MsG0380016707.01.T01:intron 55.0%
GAACGGGGCCTCTGATTCTA+AGG - Chr3:86879234-86879253 MsG0380016707.01.T01:intron 55.0%
GACACCATCAGGGAGAGAGT+GGG - Chr3:86873953-86873972 MsG0380016707.01.T01:intron 55.0%
GATCCAATCCGGCAATGGTC+AGG + Chr3:86874510-86874529 None:intergenic 55.0%
GCATCCCAGGGAGAACATTC+GGG - Chr3:86879148-86879167 MsG0380016707.01.T01:intron 55.0%
GCCATGTGCCCAGATAGCAA+AGG + Chr3:86875265-86875284 None:intergenic 55.0%
GGGAAAGGAACACGCAACCA+AGG - Chr3:86874646-86874665 MsG0380016707.01.T01:intron 55.0%
GGGTATGGCACCGTTACTGA+GGG - Chr3:86878065-86878084 MsG0380016707.01.T01:intron 55.0%
GTACGAAGCCGCGAAGAAAG+CGG - Chr3:86877410-86877429 MsG0380016707.01.T01:intron 55.0%
GTGGTTGGGTTCGATGGAGA+AGG - Chr3:86877362-86877381 MsG0380016707.01.T01:intron 55.0%
GTTCAAGCGCATCGAGGCAA+CGG + Chr3:86877479-86877498 None:intergenic 55.0%
TCCAATCCGGCAATGGTCAG+GGG + Chr3:86874508-86874527 None:intergenic 55.0%
TCTTGGGGGCAGTCACAAGT+TGG - Chr3:86875230-86875249 MsG0380016707.01.T01:intron 55.0%
TGACACCATCAGGGAGAGAG+TGG - Chr3:86873952-86873971 MsG0380016707.01.T01:intron 55.0%
TGAGCTGTTCAAGCGCATCG+AGG + Chr3:86877485-86877504 None:intergenic 55.0%
TGGCGCTCTTTACCTCGTTC+AGG - Chr3:86872949-86872968 MsG0380016707.01.T01:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - Chr3:86874213-86874232 MsG0380016707.01.T01:intron 55.0%
TTCAAGCGCATCGAGGCAAC+GGG + Chr3:86877478-86877497 None:intergenic 55.0%
TTCGCTGGGACTATCATCGG+TGG + Chr3:86877451-86877470 None:intergenic 55.0%
TTTCTTTGTCGGGGGGCAGA+AGG - Chr3:86878215-86878234 MsG0380016707.01.T01:intron 55.0%
! AGGCAACGGGTTTCTTCGCT+GGG + Chr3:86877465-86877484 None:intergenic 55.0%
! AGGCTCTGGCTTCTCGAAGA+AGG + Chr3:86875458-86875477 None:intergenic 55.0%
! CTGAGGGTTAGTGTAGGCGT+CGG - Chr3:86878081-86878100 MsG0380016707.01.T01:intron 55.0%
! GCTTTGTTCGACTGTGAGCG+TGG - Chr3:86879880-86879899 MsG0380016707.01.T01:intron 55.0%
!! GAGGTAAAGAGCGCCAGTAC+CGG + Chr3:86872945-86872964 None:intergenic 55.0%
!! GGTCAGGGGTTTGGCCTTTT+TGG + Chr3:86874494-86874513 None:intergenic 55.0%
ACATCAAAGCCGCCGCCTTC+TGG - Chr3:86872909-86872928 MsG0380016707.01.T01:CDS 60.0%
ACCCCTGACCATTGCCGGAT+TGG - Chr3:86874504-86874523 MsG0380016707.01.T01:intron 60.0%
ATAAACCCGCTCCTTGCGGC+TGG - Chr3:86873894-86873913 MsG0380016707.01.T01:intron 60.0%
ATCAAAGCCGCCGCCTTCTG+GGG - Chr3:86872911-86872930 MsG0380016707.01.T01:CDS 60.0%
CACCATCAGGGAGAGAGTGG+GGG - Chr3:86873955-86873974 MsG0380016707.01.T01:intron 60.0%
CATCAAAGCCGCCGCCTTCT+GGG - Chr3:86872910-86872929 MsG0380016707.01.T01:CDS 60.0%
CCTGTTGTGTTCTGCGGCTG+CGG + Chr3:86877229-86877248 None:intergenic 60.0%
CGGGTATGGCACCGTTACTG+AGG - Chr3:86878064-86878083 MsG0380016707.01.T01:intron 60.0%
CTTCGAGAAGCCAGAGCCTG+AGG - Chr3:86875459-86875478 MsG0380016707.01.T01:CDS 60.0%
GCCAAACCCCTGACCATTGC+CGG - Chr3:86874499-86874518 MsG0380016707.01.T01:intron 60.0%
GCGCCCACAGATCTATGCGT+TGG + Chr3:86873371-86873390 None:intergenic 60.0%
GCTGGGACTATCATCGGTGG+AGG + Chr3:86877448-86877467 None:intergenic 60.0%
GGGACTATCATCGGTGGAGG+TGG + Chr3:86877445-86877464 None:intergenic 60.0%
TACCCCCACTCTCTCCCTGA+TGG + Chr3:86873960-86873979 None:intergenic 60.0%
TACTGTTGAGCCACAGCGGC+TGG - Chr3:86879789-86879808 MsG0380016707.01.T01:intron 60.0%
TCCGGCAATGGTCAGGGGTT+TGG + Chr3:86874503-86874522 None:intergenic 60.0%
TTACCGCTCATCCAGCCGCA+AGG + Chr3:86873908-86873927 None:intergenic 60.0%
! AGCATCCGCCGCTTTCTTCG+CGG + Chr3:86877421-86877440 None:intergenic 60.0%
! GAAGGCGGCGGCTTTGATGT+CGG + Chr3:86872909-86872928 None:intergenic 60.0%
! GAGGCAACGGGTTTCTTCGC+TGG + Chr3:86877466-86877485 None:intergenic 60.0%
!! GTAAAGAGCGCCAGTACCGG+CGG + Chr3:86872942-86872961 None:intergenic 60.0%
!! TTCTGCGGCTGCGGTGTTGT+TGG + Chr3:86877220-86877239 None:intergenic 60.0%
CCGCAGCCGCAGAACACAAC+AGG - Chr3:86877226-86877245 MsG0380016707.01.T01:intron 65.0%
CGAAGCCGCGAAGAAAGCGG+CGG - Chr3:86877413-86877432 MsG0380016707.01.T01:intron 65.0%
CTCATCCAGCCGCAAGGAGC+GGG + Chr3:86873902-86873921 None:intergenic 65.0%
CTTTGGTGGAGCAGCAGCGC+TGG + Chr3:86879497-86879516 None:intergenic 65.0%
GCTCATCCAGCCGCAAGGAG+CGG + Chr3:86873903-86873922 None:intergenic 65.0%
GCTCCTTGCGGCTGGATGAG+CGG - Chr3:86873902-86873921 MsG0380016707.01.T01:intron 65.0%
CTCATGACGGCCAGCCGCTG+TGG + Chr3:86879802-86879821 None:intergenic 70.0%
ACCGGCGGTGACGCCCCAGA+AGG + Chr3:86872927-86872946 None:intergenic 75.0%
GGCGGTGACGCCCCAGAAGG+CGG + Chr3:86872924-86872943 None:intergenic 75.0%
GGTGACGCCCCAGAAGGCGG+CGG + Chr3:86872921-86872940 None:intergenic 75.0%
! TGGGGCGTCACCGCCGGTAC+TGG - Chr3:86872929-86872948 MsG0380016707.01.T01:CDS 75.0%
!! GCCTTCTGGGGCGTCACCGC+CGG - Chr3:86872923-86872942 MsG0380016707.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 86872842 86880056 86872842 ID=MsG0380016707.01;Name=MsG0380016707.01
Chr3 mRNA 86872842 86880056 86872842 ID=MsG0380016707.01.T01;Parent=MsG0380016707.01;Name=MsG0380016707.01.T01;_AED=0.47;_eAED=0.63;_QI=615|0|0.5|1|1|1|4|0|323
Chr3 exon 86872842 86873642 86872842 ID=MsG0380016707.01.T01:exon:22391;Parent=MsG0380016707.01.T01
Chr3 exon 86875353 86875539 86875353 ID=MsG0380016707.01.T01:exon:22390;Parent=MsG0380016707.01.T01
Chr3 exon 86878668 86879137 86878668 ID=MsG0380016707.01.T01:exon:22389;Parent=MsG0380016707.01.T01
Chr3 exon 86879928 86880056 86879928 ID=MsG0380016707.01.T01:exon:22388;Parent=MsG0380016707.01.T01
Chr3 five_prime_UTR 86879928 86880056 86879928 ID=MsG0380016707.01.T01:five_prime_utr;Parent=MsG0380016707.01.T01
Chr3 five_prime_UTR 86878668 86879137 86878668 ID=MsG0380016707.01.T01:five_prime_utr;Parent=MsG0380016707.01.T01
Chr3 five_prime_UTR 86875524 86875539 86875524 ID=MsG0380016707.01.T01:five_prime_utr;Parent=MsG0380016707.01.T01
Chr3 CDS 86875353 86875523 86875353 ID=MsG0380016707.01.T01:cds;Parent=MsG0380016707.01.T01
Chr3 CDS 86872842 86873642 86872842 ID=MsG0380016707.01.T01:cds;Parent=MsG0380016707.01.T01
Gene Sequence

>MsG0380016707.01.T01

ATGGAGAAGGAGAAAGAGAAAGAGTTGGTCGAATTGTACGAAGCCGCGAAGAAAGCGGCGGATGCTTCCACCTCCACCGATGATAGTCCCAGCGAAGAAACCCGTTGCCTCGATGCGCTTGAACAGCTCAAGAATTTTCCGGTCAATTACAAAATTCTCGTCAATACCCAGGTTGAGTCAACGAATGGGGAGAGAGCTAAAGCTGGGAAATTGCAGAAGAGTCCTTCAGTGAAGGTTGAGAAAGGAGAAAGTGCCAAGGTGGAGAAAGTTAATGGGAATGGTTCATCAAAGCTGAGCTCTGGAAATGTAAAGGCACAAAATGTGGATGTCAAAATTGAGAAAACTAATCGTACCTCGAACATCAAAGCGAAGGAGGAAAAACCAGTATCTGCGGCAAAGAAAATTTCATCCAGCGCTGCTGCTCCACCAAAGCTGAAGACTATGATCAAATCTAACGATTCAGCGCGAGACAAAATAAGGGAACTTCTCCGAGATGCTTTAGCTAAGGTCTTTGAAGAGGCAGATGAAGATATGATGGATGAAGTGAATGCATGTGACCCTATTCGTGTGGCAGTGACAGTGGAGTCCGTATTATTTGAAAACTGGGGTCCTTCAAATGGAGCCCAAAAGGTCAAGTATAGGTCCTTAATGTTTAATCTTAAGGATCAGAAGAACCCTGATTTCCGGAGAAAAGTTTTGCTTGGTACTGTTGAGCCACAGCGGCTGGCCGTCATGAGCTCAGCAGAAATGGCTAGTGAGCAAAGGAAGCAAGAGAATGAGAAAATCGAGCAGAAAGCTTTGTTCGACTGTGAGCGTGGACTTCAACCAAAAGCTACTACTGATCAATTTAAGTGTGGTCGGTGTGGACAAAGGAAAACCACCTATTACCAAATGCAAACTCGCAGTGCTGATGAACCTATGACAACCTATGTCACTTGTGTTAACTGCAACAACCGTTGGAAGTTTTGTTAG
Protein sequence

>MsG0380016707.01.T01

MEKEKEKELVELYEAAKKAADASTSTDDSPSEETRCLDALEQLKNFPVNYKILVNTQVESTNGERAKAGKLQKSPSVKVEKGESAKVEKVNGNGSSKLSSGNVKAQNVDVKIEKTNRTSNIKAKEEKPVSAAKKISSSAAAPPKLKTMIKSNDSARDKIRELLRDALAKVFEEADEDMMDEVNACDPIRVAVTVESVLFENWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVMSSAEMASEQRKQENEKIEQKALFDCERGLQPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVNCNNRWKFC*