AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012921.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012921.01.T02 MTR_3g034640 82.990 388 66 0 1 388 1 388 0.0 577
MsG0380012921.01.T02 MTR_3g034640 72.308 325 90 0 65 389 169 493 1.46e-156 450
MsG0380012921.01.T02 MTR_3g034610 72.222 378 82 1 33 387 1 378 0.0 511
MsG0380012921.01.T02 MTR_3g034610 70.238 168 50 0 221 388 56 223 6.53e-71 228
MsG0380012921.01.T02 MTR_3g116430 63.364 434 106 5 1 385 1 430 1.62e-163 465
MsG0380012921.01.T02 MTR_3g116430 64.032 253 82 2 136 388 59 302 7.57e-95 290
MsG0380012921.01.T02 MTR_3g116440 57.102 352 134 4 16 360 16 357 1.07e-118 349
MsG0380012921.01.T02 MTR_3g107810 50.269 372 175 1 17 388 17 378 1.61e-117 350
MsG0380012921.01.T02 MTR_3g107810 49.231 325 165 0 64 388 132 456 1.39e-101 309
MsG0380012921.01.T02 MTR_3g107810 47.988 323 164 1 64 386 158 476 1.12e-95 294
MsG0380012921.01.T02 MTR_3g107810 51.481 270 131 0 120 389 58 327 2.18e-89 278
MsG0380012921.01.T02 MTR_4g069810 35.092 379 215 15 19 386 20 378 1.73e-51 177
MsG0380012921.01.T02 MTR_4g069810 37.500 184 106 6 207 387 77 254 8.21e-27 110
MsG0380012921.01.T04 MTR_3g034640 81.742 356 65 0 1 356 33 388 0.0 538
MsG0380012921.01.T04 MTR_3g034640 72.308 325 90 0 33 357 169 493 1.74e-156 449
MsG0380012921.01.T04 MTR_3g034610 72.222 378 82 1 1 355 1 378 0.0 509
MsG0380012921.01.T04 MTR_3g034610 66.298 181 61 0 176 356 43 223 6.33e-71 227
MsG0380012921.01.T04 MTR_3g116430 62.189 402 99 5 1 353 33 430 6.81e-151 432
MsG0380012921.01.T04 MTR_3g116430 61.654 266 93 2 91 356 46 302 6.64e-95 289
MsG0380012921.01.T04 MTR_3g107810 50.562 356 166 1 1 356 33 378 5.92e-114 340
MsG0380012921.01.T04 MTR_3g107810 49.231 325 165 0 32 356 132 456 1.48e-102 310
MsG0380012921.01.T04 MTR_3g107810 47.988 323 164 1 32 354 158 476 1.28e-96 295
MsG0380012921.01.T04 MTR_3g116440 56.418 335 129 4 1 328 33 357 7.95e-110 325
MsG0380012921.01.T04 MTR_4g069810 33.699 365 211 15 1 354 34 378 4.53e-42 151
MsG0380012921.01.T04 MTR_4g069810 37.500 184 106 6 175 355 77 254 4.58e-27 110
MsG0380012921.01.T04 MTR_4g069810 36.994 173 95 10 32 200 218 380 4.12e-16 79.3
MsG0380012921.01.T01 MTR_3g034640 80.670 388 65 1 1 378 1 388 0.0 551
MsG0380012921.01.T01 MTR_3g034640 72.274 321 89 0 59 379 173 493 1.13e-153 442
MsG0380012921.01.T01 MTR_3g034610 70.370 378 79 1 33 377 1 378 1.77e-175 494
MsG0380012921.01.T01 MTR_3g034610 70.238 168 50 0 211 378 56 223 4.43e-71 228
MsG0380012921.01.T01 MTR_3g034610 50.000 66 33 0 49 114 336 401 3.17e-12 67.8
MsG0380012921.01.T01 MTR_3g116430 61.751 434 103 5 1 375 1 430 1.52e-156 447
MsG0380012921.01.T01 MTR_3g116430 64.032 253 82 2 126 378 59 302 4.91e-95 290
MsG0380012921.01.T01 MTR_3g107810 51.657 362 175 0 17 378 17 378 1.58e-120 357
MsG0380012921.01.T01 MTR_3g107810 48.750 320 164 0 59 378 137 456 3.55e-98 300
MsG0380012921.01.T01 MTR_3g107810 47.484 318 163 1 59 376 163 476 2.86e-92 285
MsG0380012921.01.T01 MTR_3g107810 43.678 87 45 1 57 143 395 477 4.46e-12 67.8
MsG0380012921.01.T01 MTR_3g116440 55.966 352 128 4 16 350 16 357 2.59e-116 342
MsG0380012921.01.T01 MTR_4g069810 35.484 372 213 15 19 376 20 378 5.13e-52 177
MsG0380012921.01.T01 MTR_4g069810 37.500 184 106 6 197 377 77 254 6.66e-27 110
MsG0380012921.01.T03 MTR_3g034640 78.090 356 65 1 1 343 33 388 8.05e-178 502
MsG0380012921.01.T03 MTR_3g034640 69.231 325 87 1 33 344 169 493 8.31e-146 421
MsG0380012921.01.T03 MTR_3g034610 69.312 378 80 2 1 342 1 378 3.10e-170 479
MsG0380012921.01.T03 MTR_3g034610 67.660 235 63 1 109 343 54 275 3.11e-99 299
MsG0380012921.01.T03 MTR_3g116430 61.111 378 107 5 1 342 33 406 1.06e-139 403
MsG0380012921.01.T03 MTR_3g116430 61.382 246 90 2 31 275 189 430 4.77e-88 271
MsG0380012921.01.T03 MTR_3g116430 57.214 201 64 3 143 343 46 224 5.28e-58 194
MsG0380012921.01.T03 MTR_3g116440 58.228 316 125 3 1 309 33 348 1.20e-108 322
MsG0380012921.01.T03 MTR_3g107810 48.596 356 160 2 1 343 33 378 7.26e-105 316
MsG0380012921.01.T03 MTR_3g107810 47.546 326 156 2 32 343 132 456 1.10e-94 290
MsG0380012921.01.T03 MTR_3g107810 45.820 323 158 2 32 341 158 476 1.05e-87 272
MsG0380012921.01.T03 MTR_4g069810 32.337 368 199 15 1 341 34 378 1.02e-39 144
MsG0380012921.01.T03 MTR_4g069810 34.426 183 100 6 175 342 77 254 3.80e-21 93.6
MsG0380012921.01.T03 MTR_4g069810 36.994 173 95 10 32 200 218 380 3.29e-16 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 82 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGACCCAACATTTCGGCTTA+TGG 0.203861 3:+27027077 MsG0380012921.01.T02:CDS
AGACCCAATATTTCAGCTTA+TGG 0.257106 3:+27027233 MsG0380012921.01.T02:CDS
TTCTTCATAAGCTGAAATAT+TGG 0.263465 3:-27026847 None:intergenic
TTCTCCATAAGCTGAAATAT+TGG 0.263465 3:-27027237 None:intergenic
CGGCCCAACATTTCAGCTTA+TGG 0.267437 3:+27027389 MsG0380012921.01.T02:CDS
AGACCCAACCTTTCAGCTTA+TGG 0.270126 3:+27026999 MsG0380012921.01.T02:CDS
AGACCCAACCTTTCAGCTTA+TGG 0.270126 3:+27027311 MsG0380012921.01.T02:CDS
CGGCCTTGGTTCAAAATCTT+TGG 0.278983 3:-27027528 None:intergenic
AGACCCAACATTTCAGCTTA+TGG 0.288132 3:+27026687 MsG0380012921.01.T02:CDS
TCTCCATATGCTGAAATATT+CGG 0.293638 3:-27027548 None:intergenic
TCTCTGCATACTAAATTATT+AGG 0.299986 3:-27027158 None:intergenic
GCACTAACACCAAGGAAAAT+AGG 0.310048 3:+27026640 MsG0380012921.01.T02:CDS
TCTTCATAAGCTGAAATATT+GGG 0.325273 3:-27026846 None:intergenic
AGACCAAACATTTCAGCTTA+TGG 0.326139 3:+27027467 MsG0380012921.01.T02:CDS
TCTCCATAAGCTGAAATATT+GGG 0.337654 3:-27027236 None:intergenic
AGACCCAACATTCCAGCTTA+TGG 0.349627 3:+27026921 MsG0380012921.01.T02:CDS
TCTTGGTTCGAAATCTTTGC+CGG 0.362236 3:-27027135 None:intergenic
TCTCCGTAAGCTGAAATATT+AGG 0.367030 3:-27026768 None:intergenic
TGAACCACGACCCAACATTT+CGG 0.373762 3:+27027070 MsG0380012921.01.T02:CDS
CATACTAAATTATTAGGTCT+TGG 0.374417 3:-27027152 None:intergenic
GAAATGATCTGCGAGAATAT+TGG 0.381517 3:+27026472 MsG0380012921.01.T02:CDS
CTCTTTAAACGCCTTCTCTT+GGG 0.386533 3:-27026574 None:intergenic
AGGAGTCCTTGAATTTCTTC+CGG 0.394452 3:-27026522 None:intergenic
TCTCCATAAGCTGGAATGTT+GGG 0.397859 3:-27026924 None:intergenic
AGGCCGAATATTTCAGCATA+TGG 0.414557 3:+27027545 MsG0380012921.01.T02:CDS
AATAAAGTTTGTAGCAATTG+TGG 0.415566 3:+27026443 MsG0380012921.01.T02:intron
CCTCTTTAAACGCCTTCTCT+TGG 0.415993 3:-27026575 None:intergenic
TAAGCTGGAATGTTGGGTCT+TGG 0.425074 3:-27026918 None:intergenic
TAAGCTGAAATATTGGGTCT+TGG 0.427019 3:-27026840 None:intergenic
AGACAATGCCATAGATGTTA+AGG 0.431710 3:+27026710 MsG0380012921.01.T02:CDS
AGACAATGCCATAGATGTTA+AGG 0.431710 3:+27027100 MsG0380012921.01.T02:CDS
TATGCTGAAATATTGGGTCT+TGG 0.433141 3:-27026606 None:intergenic
GAATTTCTTCCGGTATGTCT+TGG 0.435144 3:-27026512 None:intergenic
TAAGCTGAAATGTTTGGTCT+TGG 0.436584 3:-27027464 None:intergenic
TCTTGGTTCAAAATCGTTAG+TGG 0.450623 3:-27027447 None:intergenic
TTGCCATAAGCTGAAATGTT+TGG 0.452597 3:-27027470 None:intergenic
TAAGCTGAAATATTAGGTCT+TGG 0.457286 3:-27026762 None:intergenic
TAAGCTGAAATGTTGGGTCT+TGG 0.464437 3:-27026684 None:intergenic
AGACCTAATATTTCAGCTTA+CGG 0.471619 3:+27026765 MsG0380012921.01.T02:CDS
TAAGCTGAAAGGTTGGGTCT+TGG 0.472560 3:-27026996 None:intergenic
TAAGCTGAAAGGTTGGGTCT+TGG 0.472560 3:-27027308 None:intergenic
TAAGCTGAAATATTGGGTCT+TGG 0.475627 3:-27027230 None:intergenic
TCTTGGTTCGAAATCATTAG+TGG 0.478546 3:-27026979 None:intergenic
TCTTGGTTCGAAATCATTAG+TGG 0.478546 3:-27027291 None:intergenic
CATCAATGTTAATGAAAAGA+AGG 0.479543 3:+27027031 MsG0380012921.01.T02:CDS
TATGCTGAAATATTCGGCCT+TGG 0.481023 3:-27027542 None:intergenic
TCGTGGTTCAAAATCCTTAG+TGG 0.493289 3:-27027057 None:intergenic
TGACATTGACACCAAGGAAA+AGG 0.493430 3:+27027496 MsG0380012921.01.T02:CDS
TCTCCATAAGCTGAAATGTT+GGG 0.499953 3:-27026690 None:intergenic
TGAAAAGAAGGCAACCACTA+AGG 0.503132 3:+27027043 MsG0380012921.01.T02:CDS
TCTCCATAAGCCGAAATGTT+GGG 0.507314 3:-27027080 None:intergenic
TCTCCATAAGCTGAAATGTT+GGG 0.510874 3:-27027392 None:intergenic
ATTTCAGCATATGAAAATGA+TGG 0.513488 3:+27026618 MsG0380012921.01.T02:CDS
CCTCCATAAGCTGAAAGGTT+GGG 0.514294 3:-27027002 None:intergenic
TCTCCATAAGCTGAAAGGTT+GGG 0.521820 3:-27027314 None:intergenic
ATCTCCATAAGCTGAAATGT+TGG 0.531489 3:-27027393 None:intergenic
TTCTCCATAAGCTGGAATGT+TGG 0.533757 3:-27026925 None:intergenic
GTCTCCATAAGCTGAAATGT+TGG 0.536347 3:-27026691 None:intergenic
AGAAAATGAAATTGATGTCA+AGG 0.537174 3:+27027256 MsG0380012921.01.T02:CDS
CTCTCCATAAGCTGAAAGGT+TGG 0.542939 3:-27027315 None:intergenic
CTTGGTTCAAAATCAGTAGC+GGG 0.545604 3:-27026900 None:intergenic
GGAAAATAGGAAAGATGTCA+AGG 0.549058 3:+27026653 MsG0380012921.01.T02:CDS
CCCTCCATAAGCTGAAAGGT+TGG 0.552045 3:-27027003 None:intergenic
CATGAAAGACCAAGACATAC+CGG 0.552278 3:+27026503 MsG0380012921.01.T02:CDS
CCAAGAGAAGGCGTTTAAAG+AGG 0.553443 3:+27026575 MsG0380012921.01.T02:CDS
GTCTCCATAAGCCGAAATGT+TGG 0.565387 3:-27027081 None:intergenic
GTTAAGGAAAAGAAGAAAGC+CGG 0.571985 3:+27027116 MsG0380012921.01.T02:CDS
CATTCTCTCCATAAGCTGAA+AGG 0.576292 3:-27027319 None:intergenic
GACATACCGGAAGAAATTCA+AGG 0.576602 3:+27026516 MsG0380012921.01.T02:CDS
TAAGCTGAAATGTTGGGCCG+TGG 0.583691 3:-27027386 None:intergenic
CCCAACCTTTCAGCTTATGG+AGG 0.585012 3:+27027002 MsG0380012921.01.T02:CDS
CATTCCCTCCATAAGCTGAA+AGG 0.591945 3:-27027007 None:intergenic
TAAGCCGAAATGTTGGGTCG+TGG 0.608895 3:-27027074 None:intergenic
CCAACCTTTCAGCTTATGGA+GGG 0.614988 3:+27027003 MsG0380012921.01.T02:CDS
TAAGCTCAATACCCAAGAGA+AGG 0.615378 3:+27026563 MsG0380012921.01.T02:CDS
ATTGATGCAAAGGAAAAGAA+CGG 0.631469 3:+27027422 MsG0380012921.01.T02:CDS
AGATGATGCCATTGATGCAA+AGG 0.631796 3:+27027412 MsG0380012921.01.T02:CDS
TCTTGGTTCAAAATCAGTAG+CGG 0.646747 3:-27026901 None:intergenic
CAACAATGACATTGACACCA+AGG 0.659301 3:+27027490 MsG0380012921.01.T02:CDS
TATGGAGAGAATGACATCGA+TGG 0.661268 3:+27027329 MsG0380012921.01.T02:CDS
CCGTGGTTCAAAATCCTCAG+TGG 0.686559 3:-27027369 None:intergenic
AAATGATGGCACTAACACCA+AGG 0.697304 3:+27026632 MsG0380012921.01.T02:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATATTTTATTTATTTT+TGG + Chr3:27025833-27025852 MsG0380012921.01.T02:intron 0.0%
!! TTAATTTAATAGTACTATAA+TGG + Chr3:27025147-27025166 MsG0380012921.01.T02:intron 10.0%
!! AAAAAAAAAAAAACAGAACA+AGG - Chr3:27025545-27025564 None:intergenic 15.0%
!! AACATTGCATAATATATATA+GGG - Chr3:27025308-27025327 None:intergenic 15.0%
!! AATAAAAAATCATATACTGA+AGG - Chr3:27024936-27024955 None:intergenic 15.0%
!! ACCAAAAAAAAAAAAAACTA+AGG - Chr3:27024036-27024055 None:intergenic 15.0%
!! ATTAAATAAATATGCATATG+CGG - Chr3:27025810-27025829 None:intergenic 15.0%
!! ATTAATCAATGACTATAATA+AGG + Chr3:27024716-27024735 MsG0380012921.01.T02:intron 15.0%
!! ATTTACTTAATCATATTCTT+GGG - Chr3:27025077-27025096 None:intergenic 15.0%
!!! AATAATGATTATTTGAAACA+CGG - Chr3:27025397-27025416 None:intergenic 15.0%
!!! ATTTTTTTTAAATAGTCTAG+AGG + Chr3:27025225-27025244 MsG0380012921.01.T02:intron 15.0%
!!! TGTTTTTATTTTAATTTTCG+AGG + Chr3:27026021-27026040 MsG0380012921.01.T02:intron 15.0%
!!! TTTTTTTTAAGAAATACTGA+AGG - Chr3:27024907-27024926 None:intergenic 15.0%
!! AAAAACTAAGCTAACTAATA+TGG + Chr3:27025366-27025385 MsG0380012921.01.T02:intron 20.0%
!! AAAAATAAGTAACATGTAAG+TGG - Chr3:27024672-27024691 None:intergenic 20.0%
!! ATTGATGTTAAGAAAAAGAA+GGG + Chr3:27027188-27027207 MsG0380012921.01.T02:CDS 20.0%
!! GAACATTGCATAATATATAT+AGG - Chr3:27025309-27025328 None:intergenic 20.0%
!! GACAATTAAAAAGTAACATA+TGG - Chr3:27024151-27024170 None:intergenic 20.0%
!! GATTTACTTAATCATATTCT+TGG - Chr3:27025078-27025097 None:intergenic 20.0%
!! TTAAATAAATATGCATATGC+GGG - Chr3:27025809-27025828 None:intergenic 20.0%
!!! AGAGATATCATAATCTTTTT+GGG + Chr3:27025610-27025629 MsG0380012921.01.T02:intron 20.0%
!!! ATAATGATTATTTGAAACAC+GGG - Chr3:27025396-27025415 None:intergenic 20.0%
!!! ATTTTCATATGCTGAAATAT+TGG - Chr3:27026616-27026635 None:intergenic 20.0%
!!! GCCTTAGTTTTTTTTTTTTT+TGG + Chr3:27024032-27024051 MsG0380012921.01.T02:intron 20.0%
!!! GTCTTTTTATAAATAAAGTG+CGG + Chr3:27026155-27026174 MsG0380012921.01.T02:intron 20.0%
!!! GTTTTTTTTTTTTTTGGTAG+TGG + Chr3:27024038-27024057 MsG0380012921.01.T02:intron 20.0%
!!! TTAATTTTCGAGGAATATTT+TGG + Chr3:27026031-27026050 MsG0380012921.01.T02:intron 20.0%
!!! TTTTCATATGCTGAAATATT+GGG - Chr3:27026615-27026634 None:intergenic 20.0%
! AATAAAGTTTGTAGCAATTG+TGG + Chr3:27026443-27026462 MsG0380012921.01.T02:intron 25.0%
! AATTACCCGCAAATTTATAT+GGG + Chr3:27025742-27025761 MsG0380012921.01.T02:intron 25.0%
! ACATATGGAGTATATATTAG+AGG - Chr3:27024136-27024155 None:intergenic 25.0%
! AGAAAATGAAATTGATGTCA+AGG + Chr3:27027256-27027275 MsG0380012921.01.T02:CDS 25.0%
! AGTATATATTAGAGGTTAGA+GGG - Chr3:27024128-27024147 None:intergenic 25.0%
! ATAAATAAAGTGCGGATAAT+GGG + Chr3:27026163-27026182 MsG0380012921.01.T02:intron 25.0%
! ATTTCAGCATATGAAAATGA+TGG + Chr3:27026618-27026637 MsG0380012921.01.T02:CDS 25.0%
! CATACTAAATTATTAGGTCT+TGG - Chr3:27027155-27027174 None:intergenic 25.0%
! CATCAATGTTAATGAAAAGA+AGG + Chr3:27027031-27027050 MsG0380012921.01.T02:CDS 25.0%
! CATTGATGTTAAGAAAAAGA+AGG + Chr3:27027187-27027206 MsG0380012921.01.T02:CDS 25.0%
! CCTAAACCTAAAAACTAATA+CGG + Chr3:27025895-27025914 MsG0380012921.01.T02:intron 25.0%
! CTAAATTGGATCATATAGTT+AGG - Chr3:27025432-27025451 None:intergenic 25.0%
! GACAACTATAAAGTAACAAA+TGG + Chr3:27024423-27024442 MsG0380012921.01.T02:intron 25.0%
! GTTGATGTTAAGAAAAAGAA+GGG + Chr3:27026798-27026817 MsG0380012921.01.T02:CDS 25.0%
! TAATTACCCGCAAATTTATA+TGG + Chr3:27025741-27025760 MsG0380012921.01.T02:intron 25.0%
! TATAAATAAAGTGCGGATAA+TGG + Chr3:27026162-27026181 MsG0380012921.01.T02:intron 25.0%
! TATGGAATATGATAAGTGTT+CGG - Chr3:27025516-27025535 None:intergenic 25.0%
! TCTCTGCATACTAAATTATT+AGG - Chr3:27027161-27027180 None:intergenic 25.0%
! TCTTCATAAGCTGAAATATT+GGG - Chr3:27026849-27026868 None:intergenic 25.0%
! TTCTTCATAAGCTGAAATAT+TGG - Chr3:27026850-27026869 None:intergenic 25.0%
! TTGCATAATATATATAGGGT+TGG - Chr3:27025304-27025323 None:intergenic 25.0%
!! ATTTCTACTATTTTACGAGT+TGG + Chr3:27026082-27026101 MsG0380012921.01.T02:intron 25.0%
!! CAGAGATATCATAATCTTTT+TGG + Chr3:27025609-27025628 MsG0380012921.01.T02:intron 25.0%
!! CTTCTTTTTCTTAACATCAA+TGG - Chr3:27026799-27026818 None:intergenic 25.0%
!! GAGATATCATAATCTTTTTG+GGG + Chr3:27025611-27025630 MsG0380012921.01.T02:intron 25.0%
!! TAATGATTATTTGAAACACG+GGG - Chr3:27025395-27025414 None:intergenic 25.0%
!!! AAGACATAGTATTGATTAGA+TGG - Chr3:27024620-27024639 None:intergenic 25.0%
!!! CGAGTTGGTTTAAAAAAATT+TGG + Chr3:27026097-27026116 MsG0380012921.01.T02:intron 25.0%
!!! GCTAGATATTCACTTTTTTT+AGG + Chr3:27025247-27025266 MsG0380012921.01.T02:intron 25.0%
!!! TCGAACATTGTTTTTTCTTT+TGG + Chr3:27026402-27026421 MsG0380012921.01.T02:intron 25.0%
AACAGAACAAGGAAAGAATA+TGG - Chr3:27025534-27025553 None:intergenic 30.0%
ACTTAATCATATTCTTGGGT+AGG - Chr3:27025073-27025092 None:intergenic 30.0%
AGACCTAATATTTCAGCTTA+CGG + Chr3:27026765-27026784 MsG0380012921.01.T02:CDS 30.0%
ATATGATCCAATTTAGCATG+AGG + Chr3:27025436-27025455 MsG0380012921.01.T02:intron 30.0%
ATTGATGCAAAGGAAAAGAA+CGG + Chr3:27027422-27027441 MsG0380012921.01.T02:CDS 30.0%
ATTTGATGCAATTGAAACAC+AGG + Chr3:27024297-27024316 MsG0380012921.01.T02:intron 30.0%
CATCGATGGTAATAAAAAGA+AGG + Chr3:27027343-27027362 MsG0380012921.01.T02:CDS 30.0%
CGTTGATGTTAAGAAAAAGA+AGG + Chr3:27026797-27026816 MsG0380012921.01.T02:CDS 30.0%
GAGTATATATTAGAGGTTAG+AGG - Chr3:27024129-27024148 None:intergenic 30.0%
GCAAAGCTGACAATTATTAT+GGG - Chr3:27024482-27024501 None:intergenic 30.0%
TAAGCTGAAATATTAGGTCT+TGG - Chr3:27026765-27026784 None:intergenic 30.0%
TCTCCATAAGCTGAAATATT+GGG - Chr3:27027239-27027258 None:intergenic 30.0%
TCTCCATATGCTGAAATATT+CGG - Chr3:27027551-27027570 None:intergenic 30.0%
TGCAAAGCTGACAATTATTA+TGG - Chr3:27024483-27024502 None:intergenic 30.0%
TTCTCCATAAGCTGAAATAT+TGG - Chr3:27027240-27027259 None:intergenic 30.0%
! ATGTTAATCTGAGATTCAGT+CGG + Chr3:27025034-27025053 MsG0380012921.01.T02:intron 30.0%
! CTTCTTTTCCTTAACATCTA+TGG - Chr3:27026721-27026740 None:intergenic 30.0%
! TATGACCCATGTTTCATTTT+AGG + Chr3:27025177-27025196 MsG0380012921.01.T02:intron 30.0%
! TTGGTAAGTTACACTTTTCT+TGG + Chr3:27024010-27024029 MsG0380012921.01.T02:intron 30.0%
!! ATTGAGCTTACTTTTAGTGT+TGG - Chr3:27026553-27026572 None:intergenic 30.0%
!! GTTTTGTTAAGTGTTTCCTA+GGG - Chr3:27026344-27026363 None:intergenic 30.0%
!! TTTTTCAAACGCAGGTATAT+GGG + Chr3:27026275-27026294 MsG0380012921.01.T02:intron 30.0%
!!! AGTTTTGTTAAGTGTTTCCT+AGG - Chr3:27026345-27026364 None:intergenic 30.0%
!!! CCGTATTAGTTTTTAGGTTT+AGG - Chr3:27025898-27025917 None:intergenic 30.0%
!!! CGATTACCGTATTAGTTTTT+AGG - Chr3:27025904-27025923 None:intergenic 30.0%
!!! TTTTTTCAAACGCAGGTATA+TGG + Chr3:27026274-27026293 MsG0380012921.01.T02:intron 30.0%
!!! TTTTTTTGGTAGTGGTTTCT+TGG + Chr3:27024046-27024065 MsG0380012921.01.T02:intron 30.0%
AAAAAATACCCACAATGGGT+AGG + Chr3:27025679-27025698 MsG0380012921.01.T02:intron 35.0%
AAAAATACCCACAATGGGTA+GGG + Chr3:27025680-27025699 MsG0380012921.01.T02:intron 35.0%
AATTTATATGGGTATGGGTG+CGG + Chr3:27025753-27025772 MsG0380012921.01.T02:intron 35.0%
ACTAAAGTTGTTACCCATGA+GGG + Chr3:27026230-27026249 MsG0380012921.01.T02:intron 35.0%
AGACAATGCCATAGATGTTA+AGG + Chr3:27026710-27026729 MsG0380012921.01.T02:CDS 35.0%
AGACCAAACATTTCAGCTTA+TGG + Chr3:27027467-27027486 MsG0380012921.01.T02:CDS 35.0%
AGACCCAATATTTCAGCTTA+TGG + Chr3:27026843-27026862 MsG0380012921.01.T02:CDS 35.0%
ATCTCCATAAGCTGAAATGT+TGG - Chr3:27027396-27027415 None:intergenic 35.0%
CCATACCCATATAAATTTGC+GGG - Chr3:27025750-27025769 None:intergenic 35.0%
CCCATACCCATATAAATTTG+CGG - Chr3:27025751-27025770 None:intergenic 35.0%
CCGCAAATTTATATGGGTAT+GGG + Chr3:27025748-27025767 MsG0380012921.01.T02:intron 35.0%
GAAATGATCTGCGAGAATAT+TGG + Chr3:27026472-27026491 MsG0380012921.01.T02:CDS 35.0%
GCACTCCTAAAATGAAACAT+GGG - Chr3:27025185-27025204 None:intergenic 35.0%
GGAAAATAGGAAAGATGTCA+AGG + Chr3:27026653-27026672 MsG0380012921.01.T02:CDS 35.0%
GTTAAGGAAAAGAAGAAAGC+CGG + Chr3:27027116-27027135 MsG0380012921.01.T02:CDS 35.0%
TAAATTTGCGGGTAATTACC+CGG - Chr3:27025739-27025758 None:intergenic 35.0%
TAAGCTGAAATATTGGGTCT+TGG - Chr3:27026843-27026862 None:intergenic 35.0%
TAAGCTGAAATGTTTGGTCT+TGG - Chr3:27027467-27027486 None:intergenic 35.0%
TAGTGCGCATAGAAAATTGT+AGG - Chr3:27024989-27025008 None:intergenic 35.0%
TATGCTGAAATATTGGGTCT+TGG - Chr3:27026609-27026628 None:intergenic 35.0%
TCTCCATAAGCTGAAATGTT+GGG - Chr3:27026693-27026712 None:intergenic 35.0%
TCTCCGTAAGCTGAAATATT+AGG - Chr3:27026771-27026790 None:intergenic 35.0%
TCTTGGTTCAAAATCAGTAG+CGG - Chr3:27026904-27026923 None:intergenic 35.0%
TCTTGGTTCAAAATCGTTAG+TGG - Chr3:27027450-27027469 None:intergenic 35.0%
TGCACTCCTAAAATGAAACA+TGG - Chr3:27025186-27025205 None:intergenic 35.0%
TTGCCATAAGCTGAAATGTT+TGG - Chr3:27027473-27027492 None:intergenic 35.0%
! GACATCTTTCCTATTTTCCT+TGG - Chr3:27026652-27026671 None:intergenic 35.0%
! GTTCGGACTAGAATAAAATG+TGG - Chr3:27025499-27025518 None:intergenic 35.0%
! GTTCTTTTCCTTTGCATCAA+TGG - Chr3:27027423-27027442 None:intergenic 35.0%
! TCTTGGTTCGAAATCATTAG+TGG - Chr3:27026982-27027001 None:intergenic 35.0%
! TGTTAATCTGAGATTCAGTC+GGG + Chr3:27025035-27025054 MsG0380012921.01.T02:intron 35.0%
! TTTTCAAACGCAGGTATATG+GGG + Chr3:27026276-27026295 MsG0380012921.01.T02:intron 35.0%
!! ATCTTTTTGGGGAAACACTA+AGG + Chr3:27025622-27025641 MsG0380012921.01.T02:intron 35.0%
!!! ATGTCATTTTCTCCATAAGC+TGG - Chr3:27026936-27026955 None:intergenic 35.0%
!!! TACTTTTAGTGTTGGCGATA+AGG - Chr3:27026545-27026564 None:intergenic 35.0%
AAATATGCATATGCGGGTAG+CGG - Chr3:27025803-27025822 None:intergenic 40.0%
AAATGATGGCACTAACACCA+AGG + Chr3:27026632-27026651 MsG0380012921.01.T02:CDS 40.0%
AAATGTGGATGCCTTTGCTA+AGG - Chr3:27025484-27025503 None:intergenic 40.0%
AATCGTGACCAATGAATCGT+TGG - Chr3:27025012-27025031 None:intergenic 40.0%
ACTATAGTACCCTACCCATT+GGG + Chr3:27026305-27026324 MsG0380012921.01.T02:intron 40.0%
ACTTAGATGACCATAGGGTA+TGG + Chr3:27026199-27026218 MsG0380012921.01.T02:intron 40.0%
AGACCCAACATTTCAGCTTA+TGG + Chr3:27026687-27026706 MsG0380012921.01.T02:CDS 40.0%
AGATGATGCCATTGATGCAA+AGG + Chr3:27027412-27027431 MsG0380012921.01.T02:CDS 40.0%
AGGAGTCCTTGAATTTCTTC+CGG - Chr3:27026525-27026544 None:intergenic 40.0%
AGGCCGAATATTTCAGCATA+TGG + Chr3:27027545-27027564 MsG0380012921.01.T02:CDS 40.0%
ATTTATATGGGTATGGGTGC+GGG + Chr3:27025754-27025773 MsG0380012921.01.T02:intron 40.0%
CAACAATGACATTGACACCA+AGG + Chr3:27027490-27027509 MsG0380012921.01.T02:CDS 40.0%
CACTAAAGTTGTTACCCATG+AGG + Chr3:27026229-27026248 MsG0380012921.01.T02:intron 40.0%
CATGAAAGACCAAGACATAC+CGG + Chr3:27026503-27026522 MsG0380012921.01.T02:CDS 40.0%
CATTCTCTCCATAAGCTGAA+AGG - Chr3:27027322-27027341 None:intergenic 40.0%
CCCGCAAATTTATATGGGTA+TGG + Chr3:27025747-27025766 MsG0380012921.01.T02:intron 40.0%
CCGCAAAAAATACCCACAAT+GGG + Chr3:27025675-27025694 MsG0380012921.01.T02:intron 40.0%
CTCTTTAAACGCCTTCTCTT+GGG - Chr3:27026577-27026596 None:intergenic 40.0%
CTTACCAAGAAAAGCAAGAG+AGG - Chr3:27023998-27024017 None:intergenic 40.0%
CTTAGATGACCATAGGGTAT+GGG + Chr3:27026200-27026219 MsG0380012921.01.T02:intron 40.0%
CTTGGTTCAAAATCAGTAGC+GGG - Chr3:27026903-27026922 None:intergenic 40.0%
GAAACACTAAGGATGGCAAT+TGG + Chr3:27025633-27025652 MsG0380012921.01.T02:intron 40.0%
GAATTTCTTCCGGTATGTCT+TGG - Chr3:27026515-27026534 None:intergenic 40.0%
GACATACCGGAAGAAATTCA+AGG + Chr3:27026516-27026535 MsG0380012921.01.T02:CDS 40.0%
GCACTAACACCAAGGAAAAT+AGG + Chr3:27026640-27026659 MsG0380012921.01.T02:CDS 40.0%
GTCTCCATAAGCTGAAATGT+TGG - Chr3:27026694-27026713 None:intergenic 40.0%
TAAGCTCAATACCCAAGAGA+AGG + Chr3:27026563-27026582 MsG0380012921.01.T02:CDS 40.0%
TAAGCTGAAATGTTGGGTCT+TGG - Chr3:27026687-27026706 None:intergenic 40.0%
TACTATAGTACCCTACCCAT+TGG + Chr3:27026304-27026323 MsG0380012921.01.T02:intron 40.0%
TATAGCTCGTGAGCTTATGA+AGG - Chr3:27025938-27025957 None:intergenic 40.0%
TATGCTGAAATATTCGGCCT+TGG - Chr3:27027545-27027564 None:intergenic 40.0%
TATGGAGAGAATGACATCGA+TGG + Chr3:27027329-27027348 MsG0380012921.01.T02:CDS 40.0%
TCGTGGTTCAAAATCCTTAG+TGG - Chr3:27027060-27027079 None:intergenic 40.0%
TCTCCATAAGCCGAAATGTT+GGG - Chr3:27027083-27027102 None:intergenic 40.0%
TCTCCATAAGCTGAAAGGTT+GGG - Chr3:27027317-27027336 None:intergenic 40.0%
TCTCCATAAGCTGGAATGTT+GGG - Chr3:27026927-27026946 None:intergenic 40.0%
TGAAAAGAAGGCAACCACTA+AGG + Chr3:27027043-27027062 MsG0380012921.01.T02:CDS 40.0%
TGACATTGACACCAAGGAAA+AGG + Chr3:27027496-27027515 MsG0380012921.01.T02:CDS 40.0%
TGATGCAATTGAAACACAGG+TGG + Chr3:27024300-27024319 MsG0380012921.01.T02:intron 40.0%
TGTTAAGTGTTTCCTAGGGA+TGG - Chr3:27026340-27026359 None:intergenic 40.0%
TGTTTCCTAGGGATGGTAAT+GGG - Chr3:27026333-27026352 None:intergenic 40.0%
TTAGATGACCATAGGGTATG+GGG + Chr3:27026201-27026220 MsG0380012921.01.T02:intron 40.0%
TTCTCCATAAGCTGGAATGT+TGG - Chr3:27026928-27026947 None:intergenic 40.0%
! CTGCCAAAGATTTTGAACCA+AGG + Chr3:27027525-27027544 MsG0380012921.01.T02:CDS 40.0%
! TCTTGGTTCGAAATCTTTGC+CGG - Chr3:27027138-27027157 None:intergenic 40.0%
! TGACTTGCCTCATGCTAAAT+TGG - Chr3:27025446-27025465 None:intergenic 40.0%
!! AAAGTGCGGATAATGGGTAT+GGG + Chr3:27026169-27026188 MsG0380012921.01.T02:intron 40.0%
!! ATTGCCTCTCTTGCTTTTCT+TGG + Chr3:27023991-27024010 MsG0380012921.01.T02:CDS 40.0%
!! TAAAGTGCGGATAATGGGTA+TGG + Chr3:27026168-27026187 MsG0380012921.01.T02:intron 40.0%
!! TTTTGGGGAAACACTAAGGA+TGG + Chr3:27025626-27025645 MsG0380012921.01.T02:intron 40.0%
!!! CCATTGTGGGTATTTTTTGC+GGG - Chr3:27025677-27025696 None:intergenic 40.0%
!!! CCCATTGTGGGTATTTTTTG+CGG - Chr3:27025678-27025697 None:intergenic 40.0%
!!! CGAGCATTTTTTTCAAACGC+AGG + Chr3:27026267-27026286 MsG0380012921.01.T02:intron 40.0%
AAACGCAGGTATATGGGGAA+GGG + Chr3:27026281-27026300 MsG0380012921.01.T02:intron 45.0%
AAGCCCATACCCATAAAAGC+GGG - Chr3:27025712-27025731 None:intergenic 45.0%
AATATGCATATGCGGGTAGC+GGG - Chr3:27025802-27025821 None:intergenic 45.0%
AGACCCAACATTCCAGCTTA+TGG + Chr3:27026921-27026940 MsG0380012921.01.T02:CDS 45.0%
AGACCCAACCTTTCAGCTTA+TGG + Chr3:27026999-27027018 MsG0380012921.01.T02:CDS 45.0%
AGTTGTTACCCATGAGGGTA+TGG + Chr3:27026235-27026254 MsG0380012921.01.T02:intron 45.0%
ATGGGCACTTAGATGACCAT+AGG + Chr3:27026193-27026212 MsG0380012921.01.T02:intron 45.0%
CAAGCCCATACCCATAAAAG+CGG - Chr3:27025713-27025732 None:intergenic 45.0%
CATTCCCTCCATAAGCTGAA+AGG - Chr3:27027010-27027029 None:intergenic 45.0%
CCAACCTTTCAGCTTATGGA+GGG + Chr3:27027003-27027022 MsG0380012921.01.T02:CDS 45.0%
CCCGCAAAAAATACCCACAA+TGG + Chr3:27025674-27025693 MsG0380012921.01.T02:intron 45.0%
CCTCCATAAGCTGAAAGGTT+GGG - Chr3:27027005-27027024 None:intergenic 45.0%
CCTCTTTAAACGCCTTCTCT+TGG - Chr3:27026578-27026597 None:intergenic 45.0%
CGGCCTTGGTTCAAAATCTT+TGG - Chr3:27027531-27027550 None:intergenic 45.0%
CTCGTGAGCTTATGAAGGTA+AGG - Chr3:27025933-27025952 None:intergenic 45.0%
CTCTCCATAAGCTGAAAGGT+TGG - Chr3:27027318-27027337 None:intergenic 45.0%
GTCTCCATAAGCCGAAATGT+TGG - Chr3:27027084-27027103 None:intergenic 45.0%
GTGTTTCCTAGGGATGGTAA+TGG - Chr3:27026334-27026353 None:intergenic 45.0%
TAAAAAGAAGGCAGCCACTG+AGG + Chr3:27027355-27027374 MsG0380012921.01.T02:CDS 45.0%
TAAGCTGAAAGGTTGGGTCT+TGG - Chr3:27026999-27027018 None:intergenic 45.0%
TAAGCTGGAATGTTGGGTCT+TGG - Chr3:27026921-27026940 None:intergenic 45.0%
TAGCATGAGGCAAGTCAGTA+AGG + Chr3:27025449-27025468 MsG0380012921.01.T02:intron 45.0%
TGAACCACGACCCAACATTT+CGG + Chr3:27027070-27027089 MsG0380012921.01.T02:CDS 45.0%
TGGGCACTTAGATGACCATA+GGG + Chr3:27026194-27026213 MsG0380012921.01.T02:intron 45.0%
! CCACTGAGGATTTTGAACCA+CGG + Chr3:27027369-27027388 MsG0380012921.01.T02:CDS 45.0%
! GGTAGTGGTTTCTTGGTCTT+AGG + Chr3:27024053-27024072 MsG0380012921.01.T02:intron 45.0%
! GGTTTTACCCTACCCATTGT+GGG - Chr3:27025690-27025709 None:intergenic 45.0%
! GTTGTTACCCATGAGGGTAT+GGG + Chr3:27026236-27026255 MsG0380012921.01.T02:intron 45.0%
! TAATGGGTACCCAATGGGTA+GGG - Chr3:27026317-27026336 None:intergenic 45.0%
!! AAACCCCGCTTTTATGGGTA+TGG + Chr3:27025705-27025724 MsG0380012921.01.T02:intron 45.0%
!! AACCCCGCTTTTATGGGTAT+GGG + Chr3:27025706-27025725 MsG0380012921.01.T02:intron 45.0%
!! AGGGTAAAACCCCGCTTTTA+TGG + Chr3:27025699-27025718 MsG0380012921.01.T02:intron 45.0%
!! CCAAGAGAAGGCGTTTAAAG+AGG + Chr3:27026575-27026594 MsG0380012921.01.T02:CDS 45.0%
!! CGGATAATGGGTATGGGTAT+GGG + Chr3:27026175-27026194 MsG0380012921.01.T02:intron 45.0%
!! GATGGTAATGGGTACCCAAT+GGG - Chr3:27026322-27026341 None:intergenic 45.0%
!! GGGTAAAACCCCGCTTTTAT+GGG + Chr3:27025700-27025719 MsG0380012921.01.T02:intron 45.0%
!!! TATTTTTTGCGGGTGCCCAT+CGG - Chr3:27025667-27025686 None:intergenic 45.0%
!!! ATTTTATTTTTTATAAAAGA+TGG - Chr3:27024098-27024117 None:intergenic 5.0%
AGCCCATACCCATAAAAGCG+GGG - Chr3:27025711-27025730 None:intergenic 50.0%
ATATGCATATGCGGGTAGCG+GGG - Chr3:27025801-27025820 None:intergenic 50.0%
ATGACCATAGGGTATGGGGA+AGG + Chr3:27026205-27026224 MsG0380012921.01.T02:intron 50.0%
CAAACGCAGGTATATGGGGA+AGG + Chr3:27026280-27026299 MsG0380012921.01.T02:intron 50.0%
CCCAACCTTTCAGCTTATGG+AGG + Chr3:27027002-27027021 MsG0380012921.01.T02:CDS 50.0%
CCCTCCATAAGCTGAAAGGT+TGG - Chr3:27027006-27027025 None:intergenic 50.0%
CCGTGGTTCAAAATCCTCAG+TGG - Chr3:27027372-27027391 None:intergenic 50.0%
CGACCCAACATTTCGGCTTA+TGG + Chr3:27027077-27027096 MsG0380012921.01.T02:CDS 50.0%
CGGCCCAACATTTCAGCTTA+TGG + Chr3:27027389-27027408 MsG0380012921.01.T02:CDS 50.0%
GCGCACTACCAACGATTCAT+TGG + Chr3:27025001-27025020 MsG0380012921.01.T02:intron 50.0%
GGTGACTCACACCTTAGCAA+AGG + Chr3:27025470-27025489 MsG0380012921.01.T02:intron 50.0%
TAAGCCGAAATGTTGGGTCG+TGG - Chr3:27027077-27027096 None:intergenic 50.0%
TAAGCTGAAATGTTGGGCCG+TGG - Chr3:27027389-27027408 None:intergenic 50.0%
TAAGGATGGCAATTGGACCC+AGG + Chr3:27025640-27025659 MsG0380012921.01.T02:intron 50.0%
TATGGGTATGGGCTTGAGTC+CGG + Chr3:27025717-27025736 MsG0380012921.01.T02:intron 50.0%
TGACCATAGGGTATGGGGAA+GGG + Chr3:27026206-27026225 MsG0380012921.01.T02:intron 50.0%
! GGCAGCTTTCTCCTTTTCCT+TGG - Chr3:27027510-27027529 None:intergenic 50.0%
! GGGTTTTACCCTACCCATTG+TGG - Chr3:27025691-27025710 None:intergenic 50.0%
!! GCGGATAATGGGTATGGGTA+TGG + Chr3:27026174-27026193 MsG0380012921.01.T02:intron 50.0%
!! GGATGGTAATGGGTACCCAA+TGG - Chr3:27026323-27026342 None:intergenic 50.0%
!! GTAATGGGTACCCAATGGGT+AGG - Chr3:27026318-27026337 None:intergenic 50.0%
!!! ATTTTTTGCGGGTGCCCATC+GGG - Chr3:27025666-27025685 None:intergenic 50.0%
ATGGGTATGGGCTTGAGTCC+GGG + Chr3:27025718-27025737 MsG0380012921.01.T02:intron 55.0%
ATGGGTATGGGTGCGGGTAA+GGG + Chr3:27025760-27025779 MsG0380012921.01.T02:intron 55.0%
GGGTACCCATTACCATCCCT+AGG + Chr3:27026325-27026344 MsG0380012921.01.T02:intron 55.0%
TATGGGTATGGGTGCGGGTA+AGG + Chr3:27025759-27025778 MsG0380012921.01.T02:intron 55.0%
! TACCCATGAGGGTATGGGCT+CGG + Chr3:27026241-27026260 MsG0380012921.01.T02:intron 55.0%
ACCCGAGCCCATACCCTCAT+GGG - Chr3:27026246-27026265 None:intergenic 60.0%
CAATTGGACCCAGGCCCGAT+GGG + Chr3:27025649-27025668 MsG0380012921.01.T02:intron 60.0%
GTGCCCTTCCCCATACCCTA+TGG - Chr3:27026212-27026231 None:intergenic 60.0%
TACCCGAGCCCATACCCTCA+TGG - Chr3:27026247-27026266 None:intergenic 60.0%
! ACCCATGAGGGTATGGGCTC+GGG + Chr3:27026242-27026261 MsG0380012921.01.T02:intron 60.0%
!! CATATGCGGGTAGCGGGGTT+GGG - Chr3:27025796-27025815 None:intergenic 60.0%
!! GGTAGCGGGGTTGGGTAGTA+TGG - Chr3:27025788-27025807 None:intergenic 60.0%
GCAATTGGACCCAGGCCCGA+TGG + Chr3:27025648-27025667 MsG0380012921.01.T02:intron 65.0%
!! GCATATGCGGGTAGCGGGGT+TGG - Chr3:27025797-27025816 None:intergenic 65.0%
TGCGGGTGCCCATCGGGCCT+GGG - Chr3:27025660-27025679 None:intergenic 75.0%
TTGCGGGTGCCCATCGGGCC+TGG - Chr3:27025661-27025680 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 27023971 27027577 27023971 ID=MsG0380012921.01;Name=MsG0380012921.01
Chr3 mRNA 27023971 27027577 27023971 ID=MsG0380012921.01.T01;Parent=MsG0380012921.01;Name=MsG0380012921.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|0|0|3|0|379
Chr3 exon 27026450 27026580 27026450 ID=MsG0380012921.01.T01:exon:22568;Parent=MsG0380012921.01.T01
Chr3 exon 27026611 27027577 27026611 ID=MsG0380012921.01.T01:exon:22569;Parent=MsG0380012921.01.T01
Chr3 CDS 27023971 27024012 27023971 ID=MsG0380012921.01.T01:cds;Parent=MsG0380012921.01.T01
Chr3 CDS 27026450 27026580 27026450 ID=MsG0380012921.01.T01:cds;Parent=MsG0380012921.01.T01
Chr3 CDS 27026611 27027577 27026611 ID=MsG0380012921.01.T01:cds;Parent=MsG0380012921.01.T01
Chr3 mRNA 27023971 27027577 27023971 ID=MsG0380012921.01.T02;Parent=MsG0380012921.01;Name=MsG0380012921.01.T02;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|0|0.5|2|0|389
Chr3 exon 27026450 27027577 27026450 ID=MsG0380012921.01.T02:exon:22570;Parent=MsG0380012921.01.T02
Chr3 CDS 27023971 27024012 27023971 ID=MsG0380012921.01.T02:cds;Parent=MsG0380012921.01.T02
Chr3 CDS 27026450 27027577 27026450 ID=MsG0380012921.01.T02:cds;Parent=MsG0380012921.01.T02
Chr3 mRNA 27026504 27027577 27026504 ID=MsG0380012921.01.T03;Parent=MsG0380012921.01;Name=MsG0380012921.01.T03;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|0|0|2|0|344
Chr3 exon 27026504 27027443 27026504 ID=MsG0380012921.01.T03:exon:22571;Parent=MsG0380012921.01.T03
Chr3 exon 27027483 27027577 27027483 ID=MsG0380012921.01.T03:exon:22572;Parent=MsG0380012921.01.T03
Chr3 CDS 27026504 27027443 27026504 ID=MsG0380012921.01.T03:cds;Parent=MsG0380012921.01.T03
Chr3 CDS 27027483 27027577 27027483 ID=MsG0380012921.01.T03:cds;Parent=MsG0380012921.01.T03
Chr3 mRNA 27026504 27027577 27026504 ID=MsG0380012921.01.T04;Parent=MsG0380012921.01;Name=MsG0380012921.01.T04;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|357
Chr3 exon 27026504 27027577 27026504 ID=MsG0380012921.01.T04:exon:22573;Parent=MsG0380012921.01.T04
Chr3 CDS 27026504 27027577 27026504 ID=MsG0380012921.01.T04:cds;Parent=MsG0380012921.01.T04
Gene Sequence

>MsG0380012921.01.T02

ATGAGAACTGCTCTTGCTTTATTGCCTCTCTTGCTTTTCTTGTTTGTAGCAATTGTGGAATCAAGAAATGATCTGCGAGAATATTGGAAACTAGTCATGAAAGACCAAGACATACCGGAAGAAATTCAAGGACTCCTTATCGCCAACACTAAAAGTAAGCTCAATACCCAAGAGAAGGCGTTTAAAGAGGATCTTGAACCAAGACCCAATATTTCAGCATATGAAAATGATGGCACTAACACCAAGGAAAATAGGAAAGATGTCAAGGATTTTGAACCAAGACCCAACATTTCAGCTTATGGAGACAATGCCATAGATGTTAAGGAAAAGAAGAAAGTCGTCAAAGATTTCGAACCAAGACCTAATATTTCAGCTTACGGAGACAATGTCGTTGATGTTAAGAAAAAGAAGGGAGTCACTGAAGATTTTGAACCAAGACCCAATATTTCAGCTTATGAAGAAAATGACAGTGATGTCAAAGAAAAGAAGCAACCCGCTACTGATTTTGAACCAAGACCCAACATTCCAGCTTATGGAGAAAATGACATTGATGTCAAAGAAAAGAAGCAAGCCACTAATGATTTCGAACCAAGACCCAACCTTTCAGCTTATGGAGGGAATGACATCAATGTTAATGAAAAGAAGGCAACCACTAAGGATTTTGAACCACGACCCAACATTTCGGCTTATGGAGACAATGCCATAGATGTTAAGGAAAAGAAGAAAGCCGGCAAAGATTTCGAACCAAGACCTAATAATTTAGTATGCAGAGACAATGCCATTGATGTTAAGAAAAAGAAGGGAGTCACTAAAGATTTTGAGCCAAGACCCAATATTTCAGCTTATGGAGAAAATGAAATTGATGTCAAGGAAAAGAAGCAAGCCACTAATGATTTCGAACCAAGACCCAACCTTTCAGCTTATGGAGAGAATGACATCGATGGTAATAAAAAGAAGGCAGCCACTGAGGATTTTGAACCACGGCCCAACATTTCAGCTTATGGAGATGATGCCATTGATGCAAAGGAAAAGAACGGAGCCACTAACGATTTTGAACCAAGACCAAACATTTCAGCTTATGGCAACAATGACATTGACACCAAGGAAAAGGAGAAAGCTGCCAAAGATTTTGAACCAAGGCCGAATATTTCAGCATATGGAGAAAAATGA

>MsG0380012921.01.T04

ATGAAAGACCAAGACATACCGGAAGAAATTCAAGGACTCCTTATCGCCAACACTAAAAGTAAGCTCAATACCCAAGAGAAGGCGTTTAAAGAGGATCTTGAACCAAGACCCAATATTTCAGCATATGAAAATGATGGCACTAACACCAAGGAAAATAGGAAAGATGTCAAGGATTTTGAACCAAGACCCAACATTTCAGCTTATGGAGACAATGCCATAGATGTTAAGGAAAAGAAGAAAGTCGTCAAAGATTTCGAACCAAGACCTAATATTTCAGCTTACGGAGACAATGTCGTTGATGTTAAGAAAAAGAAGGGAGTCACTGAAGATTTTGAACCAAGACCCAATATTTCAGCTTATGAAGAAAATGACAGTGATGTCAAAGAAAAGAAGCAACCCGCTACTGATTTTGAACCAAGACCCAACATTCCAGCTTATGGAGAAAATGACATTGATGTCAAAGAAAAGAAGCAAGCCACTAATGATTTCGAACCAAGACCCAACCTTTCAGCTTATGGAGGGAATGACATCAATGTTAATGAAAAGAAGGCAACCACTAAGGATTTTGAACCACGACCCAACATTTCGGCTTATGGAGACAATGCCATAGATGTTAAGGAAAAGAAGAAAGCCGGCAAAGATTTCGAACCAAGACCTAATAATTTAGTATGCAGAGACAATGCCATTGATGTTAAGAAAAAGAAGGGAGTCACTAAAGATTTTGAGCCAAGACCCAATATTTCAGCTTATGGAGAAAATGAAATTGATGTCAAGGAAAAGAAGCAAGCCACTAATGATTTCGAACCAAGACCCAACCTTTCAGCTTATGGAGAGAATGACATCGATGGTAATAAAAAGAAGGCAGCCACTGAGGATTTTGAACCACGGCCCAACATTTCAGCTTATGGAGATGATGCCATTGATGCAAAGGAAAAGAACGGAGCCACTAACGATTTTGAACCAAGACCAAACATTTCAGCTTATGGCAACAATGACATTGACACCAAGGAAAAGGAGAAAGCTGCCAAAGATTTTGAACCAAGGCCGAATATTTCAGCATATGGAGAAAAATGA

>MsG0380012921.01.T01

ATGAGAACTGCTCTTGCTTTATTGCCTCTCTTGCTTTTCTTGTTTGTAGCAATTGTGGAATCAAGAAATGATCTGCGAGAATATTGGAAACTAGTCATGAAAGACCAAGACATACCGGAAGAAATTCAAGGACTCCTTATCGCCAACACTAAAAGTAAGCTCAATACCCAAGAACCCAATATTTCAGCATATGAAAATGATGGCACTAACACCAAGGAAAATAGGAAAGATGTCAAGGATTTTGAACCAAGACCCAACATTTCAGCTTATGGAGACAATGCCATAGATGTTAAGGAAAAGAAGAAAGTCGTCAAAGATTTCGAACCAAGACCTAATATTTCAGCTTACGGAGACAATGTCGTTGATGTTAAGAAAAAGAAGGGAGTCACTGAAGATTTTGAACCAAGACCCAATATTTCAGCTTATGAAGAAAATGACAGTGATGTCAAAGAAAAGAAGCAACCCGCTACTGATTTTGAACCAAGACCCAACATTCCAGCTTATGGAGAAAATGACATTGATGTCAAAGAAAAGAAGCAAGCCACTAATGATTTCGAACCAAGACCCAACCTTTCAGCTTATGGAGGGAATGACATCAATGTTAATGAAAAGAAGGCAACCACTAAGGATTTTGAACCACGACCCAACATTTCGGCTTATGGAGACAATGCCATAGATGTTAAGGAAAAGAAGAAAGCCGGCAAAGATTTCGAACCAAGACCTAATAATTTAGTATGCAGAGACAATGCCATTGATGTTAAGAAAAAGAAGGGAGTCACTAAAGATTTTGAGCCAAGACCCAATATTTCAGCTTATGGAGAAAATGAAATTGATGTCAAGGAAAAGAAGCAAGCCACTAATGATTTCGAACCAAGACCCAACCTTTCAGCTTATGGAGAGAATGACATCGATGGTAATAAAAAGAAGGCAGCCACTGAGGATTTTGAACCACGGCCCAACATTTCAGCTTATGGAGATGATGCCATTGATGCAAAGGAAAAGAACGGAGCCACTAACGATTTTGAACCAAGACCAAACATTTCAGCTTATGGCAACAATGACATTGACACCAAGGAAAAGGAGAAAGCTGCCAAAGATTTTGAACCAAGGCCGAATATTTCAGCATATGGAGAAAAATGA

>MsG0380012921.01.T03

ATGAAAGACCAAGACATACCGGAAGAAATTCAAGGACTCCTTATCGCCAACACTAAAAGTAAGCTCAATACCCAAGAGAAGGCGTTTAAAGAGGATCTTGAACCAAGACCCAATATTTCAGCATATGAAAATGATGGCACTAACACCAAGGAAAATAGGAAAGATGTCAAGGATTTTGAACCAAGACCCAACATTTCAGCTTATGGAGACAATGCCATAGATGTTAAGGAAAAGAAGAAAGTCGTCAAAGATTTCGAACCAAGACCTAATATTTCAGCTTACGGAGACAATGTCGTTGATGTTAAGAAAAAGAAGGGAGTCACTGAAGATTTTGAACCAAGACCCAATATTTCAGCTTATGAAGAAAATGACAGTGATGTCAAAGAAAAGAAGCAACCCGCTACTGATTTTGAACCAAGACCCAACATTCCAGCTTATGGAGAAAATGACATTGATGTCAAAGAAAAGAAGCAAGCCACTAATGATTTCGAACCAAGACCCAACCTTTCAGCTTATGGAGGGAATGACATCAATGTTAATGAAAAGAAGGCAACCACTAAGGATTTTGAACCACGACCCAACATTTCGGCTTATGGAGACAATGCCATAGATGTTAAGGAAAAGAAGAAAGCCGGCAAAGATTTCGAACCAAGACCTAATAATTTAGTATGCAGAGACAATGCCATTGATGTTAAGAAAAAGAAGGGAGTCACTAAAGATTTTGAGCCAAGACCCAATATTTCAGCTTATGGAGAAAATGAAATTGATGTCAAGGAAAAGAAGCAAGCCACTAATGATTTCGAACCAAGACCCAACCTTTCAGCTTATGGAGAGAATGACATCGATGGTAATAAAAAGAAGGCAGCCACTGAGGATTTTGAACCACGGCCCAACATTTCAGCTTATGGAGATGATGCCATTGATGCAAAGGAAAAGAACGCTTATGGCAACAATGACATTGACACCAAGGAAAAGGAGAAAGCTGCCAAAGATTTTGAACCAAGGCCGAATATTTCAGCATATGGAGAAAAATGA
Protein sequence

>MsG0380012921.01.T02

MRTALALLPLLLFLFVAIVESRNDLREYWKLVMKDQDIPEEIQGLLIANTKSKLNTQEKAFKEDLEPRPNISAYENDGTNTKENRKDVKDFEPRPNISAYGDNAIDVKEKKKVVKDFEPRPNISAYGDNVVDVKKKKGVTEDFEPRPNISAYEENDSDVKEKKQPATDFEPRPNIPAYGENDIDVKEKKQATNDFEPRPNLSAYGGNDINVNEKKATTKDFEPRPNISAYGDNAIDVKEKKKAGKDFEPRPNNLVCRDNAIDVKKKKGVTKDFEPRPNISAYGENEIDVKEKKQATNDFEPRPNLSAYGENDIDGNKKKAATEDFEPRPNISAYGDDAIDAKEKNGATNDFEPRPNISAYGNNDIDTKEKEKAAKDFEPRPNISAYGEK*

>MsG0380012921.01.T04

MKDQDIPEEIQGLLIANTKSKLNTQEKAFKEDLEPRPNISAYENDGTNTKENRKDVKDFEPRPNISAYGDNAIDVKEKKKVVKDFEPRPNISAYGDNVVDVKKKKGVTEDFEPRPNISAYEENDSDVKEKKQPATDFEPRPNIPAYGENDIDVKEKKQATNDFEPRPNLSAYGGNDINVNEKKATTKDFEPRPNISAYGDNAIDVKEKKKAGKDFEPRPNNLVCRDNAIDVKKKKGVTKDFEPRPNISAYGENEIDVKEKKQATNDFEPRPNLSAYGENDIDGNKKKAATEDFEPRPNISAYGDDAIDAKEKNGATNDFEPRPNISAYGNNDIDTKEKEKAAKDFEPRPNISAYGEK*

>MsG0380012921.01.T01

MRTALALLPLLLFLFVAIVESRNDLREYWKLVMKDQDIPEEIQGLLIANTKSKLNTQEPNISAYENDGTNTKENRKDVKDFEPRPNISAYGDNAIDVKEKKKVVKDFEPRPNISAYGDNVVDVKKKKGVTEDFEPRPNISAYEENDSDVKEKKQPATDFEPRPNIPAYGENDIDVKEKKQATNDFEPRPNLSAYGGNDINVNEKKATTKDFEPRPNISAYGDNAIDVKEKKKAGKDFEPRPNNLVCRDNAIDVKKKKGVTKDFEPRPNISAYGENEIDVKEKKQATNDFEPRPNLSAYGENDIDGNKKKAATEDFEPRPNISAYGDDAIDAKEKNGATNDFEPRPNISAYGNNDIDTKEKEKAAKDFEPRPNISAYGEK*

>MsG0380012921.01.T03

MKDQDIPEEIQGLLIANTKSKLNTQEKAFKEDLEPRPNISAYENDGTNTKENRKDVKDFEPRPNISAYGDNAIDVKEKKKVVKDFEPRPNISAYGDNVVDVKKKKGVTEDFEPRPNISAYEENDSDVKEKKQPATDFEPRPNIPAYGENDIDVKEKKQATNDFEPRPNLSAYGGNDINVNEKKATTKDFEPRPNISAYGDNAIDVKEKKKAGKDFEPRPNNLVCRDNAIDVKKKKGVTKDFEPRPNISAYGENEIDVKEKKQATNDFEPRPNLSAYGENDIDGNKKKAATEDFEPRPNISAYGDDAIDAKEKNAYGNNDIDTKEKEKAAKDFEPRPNISAYGEK*