AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014562.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014562.01.T01 MTR_3g060280 88.438 320 17 2 5 324 3 302 0.0 582
MsG0380014562.01.T01 MTR_3g060280 88.438 320 17 2 5 324 3 302 0.0 581
MsG0380014562.01.T01 MTR_3g060280 88.438 320 17 2 5 324 3 302 0.0 579
MsG0380014562.01.T01 MTR_3g060280 88.438 320 17 2 5 324 3 302 0.0 579
MsG0380014562.01.T01 MTR_3g060240 62.305 321 89 4 6 324 2 292 6.93e-140 414
MsG0380014562.01.T01 MTR_3g060220 62.025 316 89 4 10 324 6 291 2.81e-135 402
MsG0380014562.01.T01 MTR_3g060220 61.709 316 91 4 10 324 6 292 1.97e-134 400
MsG0380014562.01.T01 MTR_2g087980 38.113 265 125 5 65 324 47 277 2.19e-54 190
MsG0380014562.01.T01 MTR_2g087960 36.981 265 133 4 65 324 52 287 3.04e-54 187
MsG0380014562.01.T01 MTR_8g063270 37.061 313 158 10 21 324 199 481 1.18e-53 189
MsG0380014562.01.T01 MTR_2g016630 36.810 326 161 11 9 324 168 458 1.28e-53 189
MsG0380014562.01.T01 MTR_2g087960 36.981 265 133 4 65 324 52 287 1.71e-53 187
MsG0380014562.01.T01 MTR_3g007770 36.792 318 161 10 25 331 237 525 1.77e-53 189
MsG0380014562.01.T01 MTR_8g063270 40.149 269 133 8 64 324 28 276 3.42e-53 187
MsG0380014562.01.T01 MTR_1g098550 36.688 308 158 9 25 324 286 564 3.45e-53 188
MsG0380014562.01.T01 MTR_1g098550 36.688 308 158 9 25 324 290 568 3.70e-53 188
MsG0380014562.01.T01 MTR_4g130510 39.033 269 137 7 64 324 279 528 9.42e-52 182
MsG0380014562.01.T01 MTR_3g030040 39.405 269 136 8 64 324 299 548 1.15e-51 184
MsG0380014562.01.T01 MTR_4g130510 39.033 269 137 7 64 324 279 528 2.97e-51 182
MsG0380014562.01.T01 MTR_8g086600 38.662 269 138 8 64 324 224 473 3.22e-51 182
MsG0380014562.01.T01 MTR_4g130510 39.033 269 137 7 64 324 279 528 4.62e-51 182
MsG0380014562.01.T01 MTR_3g107520 35.714 308 161 9 25 324 280 558 7.18e-51 182
MsG0380014562.01.T01 MTR_8g092590 35.390 308 162 7 25 324 288 566 1.07e-50 181
MsG0380014562.01.T01 MTR_2g087900 36.194 268 129 6 66 324 52 286 2.21e-50 171
MsG0380014562.01.T01 MTR_4g130510 38.889 270 138 7 64 325 279 529 2.67e-50 180
MsG0380014562.01.T01 MTR_7g106680 34.091 308 166 8 25 324 228 506 6.72e-50 179
MsG0380014562.01.T01 MTR_8g037260 36.486 296 151 9 37 324 282 548 9.33e-50 178
MsG0380014562.01.T01 MTR_2g087900 36.194 268 129 6 66 324 52 286 1.34e-49 172
MsG0380014562.01.T01 MTR_2g087900 36.194 268 129 6 66 324 52 286 7.29e-49 172
MsG0380014562.01.T01 MTR_2g087900 36.194 268 129 6 66 324 52 286 2.50e-48 173
MsG0380014562.01.T01 MTR_2g035780 37.546 269 141 8 64 324 250 499 2.96e-48 174
MsG0380014562.01.T01 MTR_1g039480 32.361 377 175 10 2 317 242 599 3.35e-48 174
MsG0380014562.01.T01 MTR_4g050000 37.358 265 129 5 65 324 49 281 1.82e-47 171
MsG0380014562.01.T01 MTR_2g087950 35.955 267 131 5 65 324 49 282 1.51e-46 168
MsG0380014562.01.T01 MTR_4g088225 34.106 302 165 7 23 324 21 288 8.33e-46 166
MsG0380014562.01.T01 MTR_4g088225 32.993 294 155 6 35 324 33 288 8.69e-46 166
MsG0380014562.01.T01 MTR_1g039445 36.808 307 131 10 64 317 289 585 1.51e-45 166
MsG0380014562.01.T01 MTR_1g073740 32.787 305 162 6 24 324 23 288 1.74e-45 165
MsG0380014562.01.T01 MTR_3g450800 34.173 278 129 5 68 339 1 230 1.27e-44 162
MsG0380014562.01.T01 MTR_4g077910 35.599 309 134 10 64 317 317 615 2.62e-44 163
MsG0380014562.01.T01 MTR_5g029190 32.595 316 144 8 59 317 291 594 1.91e-43 160
MsG0380014562.01.T01 MTR_0011s0020 31.111 315 148 6 33 339 26 279 3.77e-43 158
MsG0380014562.01.T01 MTR_1g069605 34.944 269 148 8 64 324 139 388 4.20e-43 159
MsG0380014562.01.T01 MTR_7g109200 34.294 347 154 12 25 317 312 638 9.08e-43 158
MsG0380014562.01.T01 MTR_2g037830 31.596 307 157 6 33 339 26 279 3.26e-42 154
MsG0380014562.01.T01 MTR_2g037830 31.596 307 157 6 33 339 26 279 1.78e-41 154
MsG0380014562.01.T01 MTR_2g438220 32.581 310 143 9 64 317 203 502 1.23e-40 152
MsG0380014562.01.T01 MTR_7g116230 36.268 284 131 9 64 317 173 436 1.82e-40 151
MsG0380014562.01.T01 MTR_2g087900 37.156 218 102 5 66 274 52 243 3.64e-40 143
MsG0380014562.01.T01 MTR_3g005560 31.104 299 139 5 33 324 26 264 1.03e-39 145
MsG0380014562.01.T01 MTR_3g005560 31.104 299 139 5 33 324 26 264 1.21e-38 144
MsG0380014562.01.T01 MTR_3g005560 31.104 299 139 5 33 324 26 264 3.20e-38 144
MsG0380014562.01.T01 MTR_3g091270 36.649 191 104 2 126 316 107 280 8.04e-30 119
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014562.01.T01 AT1G55850 52.516 318 117 7 12 327 18 303 6.49e-108 331
MsG0380014562.01.T01 AT4G24010 35.197 304 160 7 25 324 26 296 5.31e-54 189
MsG0380014562.01.T01 AT5G17420 40.149 269 134 6 64 324 266 515 6.75e-53 187
MsG0380014562.01.T01 AT4G23990 44.776 201 105 4 127 324 118 315 1.98e-52 184
MsG0380014562.01.T01 AT4G32410 35.390 308 162 10 25 324 274 552 5.81e-52 185
MsG0380014562.01.T01 AT4G18780 34.663 326 168 9 9 324 171 461 3.02e-51 182
MsG0380014562.01.T01 AT2G25540 36.770 291 147 9 42 324 271 532 6.60e-51 182
MsG0380014562.01.T01 AT5G05170 35.065 308 163 9 25 324 258 536 6.71e-51 182
MsG0380014562.01.T01 AT4G24000 33.882 304 157 6 25 324 23 286 1.55e-50 179
MsG0380014562.01.T01 AT5G44030 37.918 269 140 7 64 324 243 492 7.44e-50 179
MsG0380014562.01.T01 AT5G44030 37.918 269 140 7 64 324 272 521 7.47e-50 179
MsG0380014562.01.T01 AT4G39350 34.740 308 164 7 25 324 276 554 7.58e-50 179
MsG0380014562.01.T01 AT5G64740 34.868 304 161 7 25 320 275 549 1.22e-48 175
MsG0380014562.01.T01 AT5G09870 34.211 304 163 7 25 320 263 537 4.72e-48 174
MsG0380014562.01.T01 AT2G21770 34.416 308 165 7 25 324 281 559 5.61e-48 173
MsG0380014562.01.T01 AT2G32620 35.581 267 137 6 63 324 49 285 9.27e-47 166
MsG0380014562.01.T01 AT2G32620 35.581 267 137 6 63 324 49 285 1.95e-46 166
MsG0380014562.01.T01 AT4G38190 34.493 345 155 10 25 317 271 596 2.55e-46 169
MsG0380014562.01.T01 AT4G15320 32.845 341 160 11 12 335 10 298 4.08e-46 167
MsG0380014562.01.T01 AT2G32620 35.581 267 137 6 63 324 49 285 6.11e-46 167
MsG0380014562.01.T01 AT4G15320 32.416 327 156 9 12 324 10 285 3.43e-45 164
MsG0380014562.01.T01 AT4G15320 32.416 327 156 9 12 324 10 285 3.80e-45 164
MsG0380014562.01.T01 AT2G32530 35.094 265 139 5 64 324 50 285 5.45e-45 164
MsG0380014562.01.T01 AT2G32540 35.273 275 125 7 64 324 50 285 7.25e-45 164
MsG0380014562.01.T01 AT5G44030 41.429 210 110 6 123 324 9 213 8.85e-44 160
MsG0380014562.01.T01 AT1G32180 32.931 331 120 9 64 317 150 455 6.44e-43 159
MsG0380014562.01.T01 AT1G32180 32.931 331 120 9 64 317 150 455 6.44e-43 159
MsG0380014562.01.T01 AT2G32610 34.328 268 138 6 64 324 50 286 8.90e-43 157
MsG0380014562.01.T01 AT4G15320 30.994 342 156 10 12 324 10 300 1.44e-42 157
MsG0380014562.01.T01 AT3G03050 32.903 310 139 8 64 317 322 618 3.59e-42 157
MsG0380014562.01.T01 AT1G02730 35.144 313 132 9 64 317 346 646 6.00e-42 156
MsG0380014562.01.T01 AT4G15320 29.688 384 158 12 12 335 10 341 2.90e-41 154
MsG0380014562.01.T01 AT2G33100 33.758 314 133 8 64 317 211 509 5.19e-41 153
MsG0380014562.01.T01 AT2G33100 33.758 314 133 8 64 317 211 509 5.19e-41 153
MsG0380014562.01.T01 AT5G16910 32.581 310 140 9 64 317 325 621 6.81e-41 153
MsG0380014562.01.T01 AT4G15290 32.727 275 132 7 64 324 50 285 1.57e-38 145
MsG0380014562.01.T01 AT2G32620 39.196 199 106 4 131 324 1 189 3.77e-37 141

Find 64 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTGGTGGCTCTATTTC+TGG 0.164514 3:+56517410 None:intergenic
TGTACATCTTTAGAGTTATC+AGG 0.217416 3:+56510604 None:intergenic
AGCCTCTAAGAGAGCATAAA+AGG 0.272949 3:+56517295 None:intergenic
CTAGATACTACTTCATAAAA+AGG 0.318959 3:-56510629 MsG0380014562.01.T01:intron
AAACACAGTGTTATCTGTTA+TGG 0.335466 3:-56517381 MsG0380014562.01.T01:CDS
ACTTTAAACCTCTTGCAAAA+AGG 0.335604 3:+56517248 None:intergenic
TTCCACAGAAAATAATAATA+AGG 0.337120 3:+56517856 None:intergenic
TTGCAGCCATATGCTTCATC+TGG 0.361516 3:-56518104 MsG0380014562.01.T01:CDS
TAATGAGTTGGTAGCTATAA+AGG 0.367515 3:-56517171 MsG0380014562.01.T01:intron
ACTGTGTTTATTACCATCAT+TGG 0.371404 3:+56517395 None:intergenic
CATACAAATATGTCCACTTC+TGG 0.371659 3:+56517443 None:intergenic
GTATGCTTGCTGCAGAACTA+TGG 0.372447 3:-56518002 MsG0380014562.01.T01:CDS
GTAGAAATTGTACAGTGAAA+TGG 0.384070 3:-56510879 MsG0380014562.01.T01:intron
AGAAGAAGATGGAGGAAAGT+TGG 0.391001 3:-56518034 MsG0380014562.01.T01:CDS
GGAGGAAAGTTGGTATGGTT+TGG 0.396339 3:-56518024 MsG0380014562.01.T01:CDS
AGCAATATTAGTGTCCTTGA+TGG 0.406816 3:+56517193 None:intergenic
CCTTTGTTTGAAACAAAGAA+AGG 0.419104 3:-56518168 MsG0380014562.01.T01:CDS
ATGGGCAGAGGCAGAGGCAG+AGG 0.420100 3:-56518201 MsG0380014562.01.T01:CDS
TTGGGAGAGTCTATCCTTGA+AGG 0.423142 3:+56517921 None:intergenic
CTTGCTGCAGAACTATGGTT+TGG 0.424208 3:-56517997 MsG0380014562.01.T01:CDS
TTCTTGTTGAGTATAGTTTG+TGG 0.432263 3:+56518056 None:intergenic
GCAGTCATGGGCAGAGGCAG+AGG 0.447699 3:-56518207 None:intergenic
TAGCTCCAGCTTTGTAGTTG+TGG 0.450754 3:+56510524 None:intergenic
GGAAAGGAAGGCTTATCTAT+AGG 0.452937 3:-56518146 MsG0380014562.01.T01:CDS
GTGTTTATTACCATCATTGG+TGG 0.456912 3:+56517398 None:intergenic
AGAAATAGAGCCACCAATGA+TGG 0.472324 3:-56517408 MsG0380014562.01.T01:CDS
AGCTGGAGCTATGAATTCAT+TGG 0.478202 3:-56510512 MsG0380014562.01.T01:CDS
AGAAGCACGTTTAAAGCATA+GGG 0.480079 3:-56510813 MsG0380014562.01.T01:CDS
CTTTGTTTGAAACAAAGAAA+GGG 0.482401 3:-56518167 MsG0380014562.01.T01:CDS
TGGGAGAGTCTATCCTTGAA+GGG 0.488481 3:+56517922 None:intergenic
CCTTTCTTTGTTTCAAACAA+AGG 0.496299 3:+56518168 None:intergenic
TGGTTTCATGTTGCCAACTT+TGG 0.506683 3:-56510581 MsG0380014562.01.T01:CDS
CGAGCTAAATACACCAAAGT+TGG 0.507201 3:+56510568 None:intergenic
TGAGCATATGTTGCCAGAAG+TGG 0.510897 3:-56517456 MsG0380014562.01.T01:CDS
TTCTCACTCAAGCTTTCAGA+TGG 0.510987 3:-56517963 MsG0380014562.01.T01:CDS
TTTGAAACAAAGAAAGGGAA+AGG 0.515212 3:-56518162 MsG0380014562.01.T01:CDS
TGTATTTAGCTCGTGAAAAG+AGG 0.520067 3:-56510558 MsG0380014562.01.T01:CDS
TTGTAGTTGTGGTGATATTG+AGG 0.521688 3:+56510535 None:intergenic
AAGATGGAGGAAAGTTGGTA+TGG 0.524582 3:-56518029 MsG0380014562.01.T01:CDS
AAAATATGCAGCAGGTGACC+TGG 0.526110 3:+56517220 None:intergenic
AAGAAGCACGTTTAAAGCAT+AGG 0.526956 3:-56510814 MsG0380014562.01.T01:CDS
TGCTTTAAACGTGCTTCTTG+AGG 0.527337 3:+56510818 None:intergenic
AAACAAAGAAAGGGAAAGGA+AGG 0.531139 3:-56518158 MsG0380014562.01.T01:CDS
GTAGAGCCAGATGAAGCATA+TGG 0.534110 3:+56518098 None:intergenic
TATCACCACAACTACAAAGC+TGG 0.534917 3:-56510529 MsG0380014562.01.T01:CDS
ACTCAACAAGAAGAAGAAGA+TGG 0.540307 3:-56518045 MsG0380014562.01.T01:CDS
CACTAATATTGCTAATGAGT+TGG 0.541619 3:-56517183 MsG0380014562.01.T01:CDS
GTACATCTTTAGAGTTATCA+GGG 0.549753 3:+56510605 None:intergenic
TACACACTCAACTTCTCAGA+TGG 0.558181 3:+56517347 None:intergenic
ATGGTATTAAAATATGCAGC+AGG 0.561767 3:+56517212 None:intergenic
GTGTATCTATCTGATGATGG+TGG 0.565740 3:-56517329 MsG0380014562.01.T01:CDS
TTACTTGAAGAATTGTGTCA+TGG 0.567310 3:+56510753 None:intergenic
TGAAGGGTTGTCTGAAAACA+AGG 0.570443 3:+56517938 None:intergenic
TATAGTTTGTGGTTATGATG+TGG 0.575609 3:+56518067 None:intergenic
AGTGTGTATCTATCTGATGA+TGG 0.584553 3:-56517332 MsG0380014562.01.T01:CDS
AGAGGTTTAAAGTTGAGCCC+AGG 0.586421 3:-56517238 MsG0380014562.01.T01:CDS
AAATATGCAGCAGGTGACCT+GGG 0.598065 3:+56517221 None:intergenic
AGTGGACATATTTGTATGCA+CGG 0.599242 3:-56517438 MsG0380014562.01.T01:CDS
TGTATCTATCTGATGATGGT+GGG 0.640086 3:-56517328 MsG0380014562.01.T01:CDS
GCATATGGCTGCAAATAATG+AGG 0.646183 3:+56518113 None:intergenic
GATAACTCTAAAGATGTACA+TGG 0.650554 3:-56510601 MsG0380014562.01.T01:CDS
CAACAAGAAGAAGAAGATGG+AGG 0.662949 3:-56518042 MsG0380014562.01.T01:CDS
TCAAGGATAGACTCTCCCAA+AGG 0.688225 3:-56517918 MsG0380014562.01.T01:CDS
GAAGCACGTTTAAAGCATAG+GGG 0.696063 3:-56510812 MsG0380014562.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTTAACAAATATAAC+CGG + Chr3:56511911-56511930 None:intergenic 10.0%
!! TAAAAAATGTTGTATTAAAA+CGG - Chr3:56513118-56513137 MsG0380014562.01.T01:intron 10.0%
!! TAAATAATAAAATGAATAGA+TGG - Chr3:56512459-56512478 MsG0380014562.01.T01:intron 10.0%
!! TATGATTTAAATATTACATA+TGG - Chr3:56517567-56517586 MsG0380014562.01.T01:intron 10.0%
!!! ATGATTATAATTTTTCTTAT+TGG - Chr3:56517701-56517720 MsG0380014562.01.T01:intron 10.0%
!!! GACAATATATTATTTTAAAA+GGG + Chr3:56511952-56511971 None:intergenic 10.0%
!!! TAATATGTTTTCTTATATAA+AGG + Chr3:56511733-56511752 None:intergenic 10.0%
!!! TATATCCAATTTAATTTTTT+GGG + Chr3:56513150-56513169 None:intergenic 10.0%
!!! TGATTATAATTTTTCTTATT+GGG - Chr3:56517702-56517721 MsG0380014562.01.T01:intron 10.0%
!!! TGTTATTTTTTTTTTTTTGA+GGG - Chr3:56515695-56515714 MsG0380014562.01.T01:intron 10.0%
!!! TTATATCCAATTTAATTTTT+TGG + Chr3:56513151-56513170 None:intergenic 10.0%
!!! TTGTTATTTTTTTTTTTTGA+GGG - Chr3:56513460-56513479 MsG0380014562.01.T01:intron 10.0%
!!! TTGTTATTTTTTTTTTTTTG+AGG - Chr3:56515694-56515713 MsG0380014562.01.T01:intron 10.0%
!!! TTTCATTTTTTTAGTTTTTT+TGG + Chr3:56511671-56511690 None:intergenic 10.0%
!!! TTTGTTATTTTTTTTTTTTG+AGG - Chr3:56513459-56513478 MsG0380014562.01.T01:intron 10.0%
!!! TTTTAGATTAAATTTCATTT+TGG + Chr3:56510890-56510909 None:intergenic 10.0%
!! AAAAGTTATAACTTTCTTTA+AGG - Chr3:56516972-56516991 MsG0380014562.01.T01:intron 15.0%
!! AAAGTTATAACTTTCTTTAA+GGG - Chr3:56516973-56516992 MsG0380014562.01.T01:intron 15.0%
!! ACAAAATTCTGAATATTTAT+AGG - Chr3:56517234-56517253 MsG0380014562.01.T01:CDS 15.0%
!! ATGATAAGGAAAAAAAATTA+AGG - Chr3:56513567-56513586 MsG0380014562.01.T01:intron 15.0%
!! CAAAATTCTGAATATTTATA+GGG - Chr3:56517235-56517254 MsG0380014562.01.T01:CDS 15.0%
!! CTAAAGTATAATAATTCATT+TGG + Chr3:56511131-56511150 None:intergenic 15.0%
!! GTAAGTAGATAAAAATAAAA+TGG + Chr3:56510751-56510770 None:intergenic 15.0%
!! TCTATAAATTAAAACTAGTA+TGG + Chr3:56514342-56514361 None:intergenic 15.0%
!!! AAAAGAAAGTTATAACTTTT+TGG + Chr3:56512501-56512520 None:intergenic 15.0%
!!! AAAGTTATAACTTTCTTTTA+AGG - Chr3:56512502-56512521 MsG0380014562.01.T01:intron 15.0%
!!! AAGTTATAACTTTCTTTTAA+GGG - Chr3:56512503-56512522 MsG0380014562.01.T01:intron 15.0%
!!! ATTTTTTTTTCTTTTCACAA+AGG - Chr3:56512325-56512344 MsG0380014562.01.T01:intron 15.0%
!!! CTTTAATAAGTATAGTATTT+TGG + Chr3:56513689-56513708 None:intergenic 15.0%
!!! CTTTCATTCTTTAATATTTT+TGG + Chr3:56511640-56511659 None:intergenic 15.0%
!!! CTTTTAAGTTTTTAAAAGAA+GGG + Chr3:56517278-56517297 None:intergenic 15.0%
!!! GAATTTGAAATAATAGAAAT+TGG - Chr3:56513094-56513113 MsG0380014562.01.T01:intron 15.0%
!!! GGACAATATATTATTTTAAA+AGG + Chr3:56511953-56511972 None:intergenic 15.0%
!!! TAAAGAAAGTTATAACTTTT+TGG + Chr3:56516972-56516991 None:intergenic 15.0%
!!! TTTAATTGTGTCTAATTTTT+TGG + Chr3:56512966-56512985 None:intergenic 15.0%
!!! TTTGTTTAAATTTTAGTTTC+TGG + Chr3:56513877-56513896 None:intergenic 15.0%
!!! TTTTTTTTTCTTTTCACAAA+GGG - Chr3:56512326-56512345 MsG0380014562.01.T01:intron 15.0%
!!! TTTTTTTTTTCTTTTCACAA+AGG - Chr3:56514564-56514583 MsG0380014562.01.T01:intron 15.0%
!! ACAAAACTGTGAATATTTAT+AGG + Chr3:56512547-56512566 None:intergenic 20.0%
!! AGAGACTATATAATCATATT+AGG - Chr3:56513944-56513963 MsG0380014562.01.T01:intron 20.0%
!! ATAAAAATAAAATGGACCTT+TGG + Chr3:56510743-56510762 None:intergenic 20.0%
!! CAAAACTGTGAATATTTATA+GGG + Chr3:56512546-56512565 None:intergenic 20.0%
!! GGTATAAATTTCCATTTAAA+GGG + Chr3:56511975-56511994 None:intergenic 20.0%
!! GTATAAATTTCCATTTAAAG+GGG + Chr3:56511974-56511993 None:intergenic 20.0%
!! TAAAAATAAAATGGACCTTT+GGG + Chr3:56510742-56510761 None:intergenic 20.0%
!! TAATAAAATGAATAGATGGT+AGG - Chr3:56512463-56512482 MsG0380014562.01.T01:intron 20.0%
!! TATGATCTAATCACATTTAT+TGG + Chr3:56517517-56517536 None:intergenic 20.0%
!! TATGATTATATAGTCTCTAA+CGG + Chr3:56513942-56513961 None:intergenic 20.0%
!! TCAATATAACTAATGTCTTA+AGG + Chr3:56513318-56513337 None:intergenic 20.0%
!! TGAAGTTAATAATGTATATG+CGG + Chr3:56512300-56512319 None:intergenic 20.0%
!! TGGTATAAATTTCCATTTAA+AGG + Chr3:56511976-56511995 None:intergenic 20.0%
!! TGTTTATAAAAAGTGATAGA+GGG + Chr3:56518167-56518186 None:intergenic 20.0%
!! TTATAGATTGAGTAAATTGT+TGG - Chr3:56512889-56512908 MsG0380014562.01.T01:intron 20.0%
!! TTCCACAGAAAATAATAATA+AGG + Chr3:56510789-56510808 None:intergenic 20.0%
!! TTGTTTATAAAAAGTGATAG+AGG + Chr3:56518168-56518187 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG - Chr3:56512733-56512752 MsG0380014562.01.T01:intron 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + Chr3:56512752-56512733 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG - Chr3:56512734-56512753 MsG0380014562.01.T01:intron 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + Chr3:56512753-56512734 None:intergenic 20.0%
!!! ACATTTTACTTAAGCATTTT+AGG - Chr3:56517080-56517099 MsG0380014562.01.T01:intron 20.0%
!!! ACATTTTTCTTAAGCATTTT+AGG - Chr3:56512610-56512629 MsG0380014562.01.T01:intron 20.0%
!!! ACCTAATGTCTTAAAATTTT+GGG + Chr3:56514044-56514063 None:intergenic 20.0%
!!! ATGTTGATGGAAATTTTTAT+AGG - Chr3:56512704-56512723 MsG0380014562.01.T01:intron 20.0%
!!! CATTTTACTTAAGCATTTTA+GGG - Chr3:56517081-56517100 MsG0380014562.01.T01:intron 20.0%
!!! CATTTTTCTTAAGCATTTTA+GGG - Chr3:56512611-56512630 MsG0380014562.01.T01:intron 20.0%
!!! CTTTTATTTTGATGTTTAAG+TGG - Chr3:56511824-56511843 MsG0380014562.01.T01:intron 20.0%
!!! GCTAATGGAAAAATTTTATA+GGG - Chr3:56512643-56512662 MsG0380014562.01.T01:intron 20.0%
!!! GCTTTTAAGTTTTTAAAAGA+AGG + Chr3:56517279-56517298 None:intergenic 20.0%
!!! TAAATTGTTGGTGATTTTAT+GGG - Chr3:56512901-56512920 MsG0380014562.01.T01:intron 20.0%
!!! TAATTTTTCTTATTGGGTTA+TGG - Chr3:56517708-56517727 MsG0380014562.01.T01:intron 20.0%
!!! TACCTTATTATTATTTTCTG+TGG - Chr3:56510784-56510803 MsG0380014562.01.T01:CDS 20.0%
!!! TGCTAATGGAAAAATTTTAT+AGG - Chr3:56512642-56512661 MsG0380014562.01.T01:intron 20.0%
!!! TGTTGATGGAAATTTTTATA+GGG - Chr3:56512705-56512724 MsG0380014562.01.T01:intron 20.0%
!!! TTTTACAATTTGAATTGATG+TGG + Chr3:56513720-56513739 None:intergenic 20.0%
!!! TTTTTTAGTTTTTTTGGTCA+GGG + Chr3:56511665-56511684 None:intergenic 20.0%
!!! TTTTTTTAGTTTTTTTGGTC+AGG + Chr3:56511666-56511685 None:intergenic 20.0%
! AAATGTTGTATTAAAACGGA+TGG - Chr3:56513122-56513141 MsG0380014562.01.T01:intron 25.0%
! AATATATTGTCCCCTTTAAA+TGG - Chr3:56511961-56511980 MsG0380014562.01.T01:intron 25.0%
! ACTGTACAATTTCTACATAA+TGG + Chr3:56517759-56517778 None:intergenic 25.0%
! ATGCTTAAGTAAAATGTCAT+AGG + Chr3:56517077-56517096 None:intergenic 25.0%
! CTACACAATTGAATCATATT+AGG - Chr3:56513977-56513996 MsG0380014562.01.T01:intron 25.0%
! CTAGATACTACTTCATAAAA+AGG - Chr3:56518013-56518032 MsG0380014562.01.T01:CDS 25.0%
! CTGTACAATTTCTACATAAT+GGG + Chr3:56517758-56517777 None:intergenic 25.0%
! GAAGTTAATAATGTATATGC+GGG + Chr3:56512299-56512318 None:intergenic 25.0%
! TAAGTTTAACCATATCTTTG+CGG + Chr3:56517380-56517399 None:intergenic 25.0%
! TATATGAAATAGTGAGTTGT+TGG - Chr3:56513613-56513632 MsG0380014562.01.T01:intron 25.0%
! TGCTTAAGTAAAATGTCATA+GGG + Chr3:56517076-56517095 None:intergenic 25.0%
!! AACTAATGTCTTAAGGTTTT+AGG + Chr3:56513311-56513330 None:intergenic 25.0%
!! AATGTTTGTTTAGACTCTTT+TGG - Chr3:56517597-56517616 MsG0380014562.01.T01:intron 25.0%
!! ATTGCTTAACTTTTGTTCTT+TGG + Chr3:56513803-56513822 None:intergenic 25.0%
!! CACCTAATGTCTTAAAATTT+TGG + Chr3:56514045-56514064 None:intergenic 25.0%
!! CTTTGTTTGAAACAAAGAAA+GGG - Chr3:56510475-56510494 MsG0380014562.01.T01:CDS 25.0%
!! TGACTTTATTTGACTTTAGT+TGG + Chr3:56513380-56513399 None:intergenic 25.0%
!!! AACTATGGTTTGGTTTTTAT+TGG - Chr3:56510655-56510674 MsG0380014562.01.T01:intron 25.0%
!!! AAGTATTGAAAAAGAATAGC+TGG - Chr3:56517342-56517361 MsG0380014562.01.T01:CDS 25.0%
!!! ACCCAAAATTTTAAGACATT+AGG - Chr3:56514040-56514059 MsG0380014562.01.T01:intron 25.0%
!!! GTAAATTGTTGGTGATTTTA+TGG - Chr3:56512900-56512919 MsG0380014562.01.T01:intron 25.0%
!!! TAATTTTACGGATTTGTTGA+AGG - Chr3:56513636-56513655 MsG0380014562.01.T01:intron 25.0%
!!! TATCTCTTGGACTTTTTTTT+TGG + Chr3:56517486-56517505 None:intergenic 25.0%
!!! TGCATATTTTAATACCATCA+AGG - Chr3:56511435-56511454 MsG0380014562.01.T01:intron 25.0%
AAACACAGTGTTATCTGTTA+TGG - Chr3:56511261-56511280 MsG0380014562.01.T01:intron 30.0%
AAAGACTGCTAAATTGAACT+TGG + Chr3:56511577-56511596 None:intergenic 30.0%
AACATGAGAGAGAAATGATA+AGG - Chr3:56513553-56513572 MsG0380014562.01.T01:intron 30.0%
AACTGTCAATTGCCAAAAAT+CGG - Chr3:56512365-56512384 MsG0380014562.01.T01:intron 30.0%
AACTTGGAAACAAAAGTCAT+TGG + Chr3:56511561-56511580 None:intergenic 30.0%
ACTGTGTTTATTACCATCAT+TGG + Chr3:56511250-56511269 None:intergenic 30.0%
ACTTGGAAACAAAAGTCATT+GGG + Chr3:56511560-56511579 None:intergenic 30.0%
ACTTTAAACCTCTTGCAAAA+AGG + Chr3:56511397-56511416 None:intergenic 30.0%
ATAGGGACTAAAAATGTTGA+TGG - Chr3:56512691-56512710 MsG0380014562.01.T01:intron 30.0%
ATGCTTAAGAAAAATGTCAC+AGG + Chr3:56512607-56512626 None:intergenic 30.0%
ATGGTATTAAAATATGCAGC+AGG + Chr3:56511433-56511452 None:intergenic 30.0%
ATTGGAACAAAACTATCTCT+TGG + Chr3:56517499-56517518 None:intergenic 30.0%
CACTAATATTGCTAATGAGT+TGG - Chr3:56511459-56511478 MsG0380014562.01.T01:intron 30.0%
GTAGAAATTGTACAGTGAAA+TGG - Chr3:56517763-56517782 MsG0380014562.01.T01:intron 30.0%
TGAGATATCATACAACTGTT+AGG - Chr3:56514226-56514245 MsG0380014562.01.T01:intron 30.0%
TGCTTAAGAAAAATGTCACA+GGG + Chr3:56512606-56512625 None:intergenic 30.0%
TGGCACCCAAAAAATTAAAT+TGG - Chr3:56513142-56513161 MsG0380014562.01.T01:intron 30.0%
TTACTTGAAGAATTGTGTCA+TGG + Chr3:56517892-56517911 None:intergenic 30.0%
TTAGGGACAAAAAATGCTAA+TGG - Chr3:56512628-56512647 MsG0380014562.01.T01:intron 30.0%
TTCTTGTTGAGTATAGTTTG+TGG + Chr3:56510589-56510608 None:intergenic 30.0%
TTGAAGGAGTTGAAGATTTA+CGG - Chr3:56512928-56512947 MsG0380014562.01.T01:intron 30.0%
TTGGATGAACAATTCACATA+AGG + Chr3:56517467-56517486 None:intergenic 30.0%
! AACACATCAGCGTTTTTATT+TGG - Chr3:56513042-56513061 MsG0380014562.01.T01:intron 30.0%
! ATGCCGATGGAAAATTTTAT+AGG - Chr3:56514907-56514926 MsG0380014562.01.T01:intron 30.0%
! ATGGATTGTATCATCACATT+AGG - Chr3:56513244-56513263 MsG0380014562.01.T01:intron 30.0%
! CCTTTCTTTGTTTCAAACAA+AGG + Chr3:56510477-56510496 None:intergenic 30.0%
! CCTTTGTTTGAAACAAAGAA+AGG - Chr3:56510474-56510493 MsG0380014562.01.T01:CDS 30.0%
! CTTAACTTTTGTTCTTTGGT+AGG + Chr3:56513799-56513818 None:intergenic 30.0%
! GATAACTCTAAAGATGTACA+TGG - Chr3:56518041-56518060 MsG0380014562.01.T01:CDS 30.0%
! GTCCCTATAAAATTTTCCAT+CGG + Chr3:56514913-56514932 None:intergenic 30.0%
! TATAGTTTGTGGTTATGATG+TGG + Chr3:56510578-56510597 None:intergenic 30.0%
! TGATTTTATGGGTATGTTGA+AGG - Chr3:56512912-56512931 MsG0380014562.01.T01:intron 30.0%
! TGCCGATGGAAAATTTTATA+GGG - Chr3:56514908-56514927 MsG0380014562.01.T01:intron 30.0%
! TTTGAAACAAAGAAAGGGAA+AGG - Chr3:56510480-56510499 MsG0380014562.01.T01:CDS 30.0%
!! ATCTAGAAATGTTGACTTGT+GGG + Chr3:56512273-56512292 None:intergenic 30.0%
!! GTACATCTTTAGAGTTATCA+GGG + Chr3:56518040-56518059 None:intergenic 30.0%
!! TAATGAGTTGGTAGCTATAA+AGG - Chr3:56511471-56511490 MsG0380014562.01.T01:intron 30.0%
!! TGTACATCTTTAGAGTTATC+AGG + Chr3:56518041-56518060 None:intergenic 30.0%
!! TGTTAACTCAACGCTTTTTA+GGG + Chr3:56517652-56517671 None:intergenic 30.0%
!!! ATGAGCGAAACTCTTTTTTA+TGG + Chr3:56511996-56512015 None:intergenic 30.0%
!!! GACTAGTTTTCTCTCTTATA+CGG - Chr3:56511012-56511031 MsG0380014562.01.T01:intron 30.0%
!!! GTGAGTTGTTGGTAATTTTA+CGG - Chr3:56513624-56513643 MsG0380014562.01.T01:intron 30.0%
AAACAAAGAAAGGGAAAGGA+AGG - Chr3:56510484-56510503 MsG0380014562.01.T01:CDS 35.0%
AATTGACAACCGCAAAGATA+TGG - Chr3:56517368-56517387 MsG0380014562.01.T01:CDS 35.0%
ACTCAACAAGAAGAAGAAGA+TGG - Chr3:56510597-56510616 MsG0380014562.01.T01:CDS 35.0%
ACTCTGAACATTACGATGAA+CGG + Chr3:56513208-56513227 None:intergenic 35.0%
AGCAATATTAGTGTCCTTGA+TGG + Chr3:56511452-56511471 None:intergenic 35.0%
AGGCACAACTTGGTAAAAAA+AGG - Chr3:56513405-56513424 MsG0380014562.01.T01:intron 35.0%
AGTGGACATATTTGTATGCA+CGG - Chr3:56511204-56511223 MsG0380014562.01.T01:intron 35.0%
AGTGTGTATCTATCTGATGA+TGG - Chr3:56511310-56511329 MsG0380014562.01.T01:intron 35.0%
ATGCCGATGGAAAATGTTAT+AGG - Chr3:56512673-56512692 MsG0380014562.01.T01:intron 35.0%
CATACAAATATGTCCACTTC+TGG + Chr3:56511202-56511221 None:intergenic 35.0%
CTTGGTAAAAAAAGGTGAGT+TGG - Chr3:56513413-56513432 MsG0380014562.01.T01:intron 35.0%
GGATGAACTTCTGATTATCA+GGG - Chr3:56517618-56517637 MsG0380014562.01.T01:intron 35.0%
GTCATTGGGTTCATTGAATT+TGG + Chr3:56511546-56511565 None:intergenic 35.0%
GTGAGTTAAAATTCCAGTGT+AGG + Chr3:56514110-56514129 None:intergenic 35.0%
GTGATGATACAATCCATTGT+AGG + Chr3:56513241-56513260 None:intergenic 35.0%
GTGTTTATTACCATCATTGG+TGG + Chr3:56511247-56511266 None:intergenic 35.0%
GTTAAAATTCCAGTGTAGGT+AGG + Chr3:56514106-56514125 None:intergenic 35.0%
GTTAATAATGTATATGCGGG+CGG + Chr3:56512296-56512315 None:intergenic 35.0%
TAACCAAGTTAATTGTGCCA+TGG + Chr3:56517967-56517986 None:intergenic 35.0%
TGAACAATTCACATAAGGCA+TGG + Chr3:56517462-56517481 None:intergenic 35.0%
TGAAGGAGTTGAAGATTTAC+GGG - Chr3:56512929-56512948 MsG0380014562.01.T01:intron 35.0%
TGCCGATGGAAAATGTTATA+GGG - Chr3:56512674-56512693 MsG0380014562.01.T01:intron 35.0%
TGGATGAACTTCTGATTATC+AGG - Chr3:56517617-56517636 MsG0380014562.01.T01:intron 35.0%
TTGAAGGAGTTGGAGATTAT+TGG - Chr3:56513652-56513671 MsG0380014562.01.T01:intron 35.0%
TTGTAGTTGTGGTGATATTG+AGG + Chr3:56518110-56518129 None:intergenic 35.0%
! AACCTTTTATGCTCTCTTAG+AGG - Chr3:56511345-56511364 MsG0380014562.01.T01:intron 35.0%
! AAGAAGCACGTTTAAAGCAT+AGG - Chr3:56517828-56517847 MsG0380014562.01.T01:intron 35.0%
! AGAAGCACGTTTAAAGCATA+GGG - Chr3:56517829-56517848 MsG0380014562.01.T01:intron 35.0%
! GTCCCTATAACATTTTCCAT+CGG + Chr3:56512679-56512698 None:intergenic 35.0%
! TGTATTTAGCTCGTGAAAAG+AGG - Chr3:56518084-56518103 MsG0380014562.01.T01:CDS 35.0%
!! AAAAAAAGGTGAGTTGGTAG+CGG - Chr3:56513419-56513438 MsG0380014562.01.T01:intron 35.0%
!! ATATTGTTGATTCACACCAG+TGG + Chr3:56514268-56514287 None:intergenic 35.0%
!! GATCTAGAAATGTTGACTTG+TGG + Chr3:56512274-56512293 None:intergenic 35.0%
!! GTGTTAACTCAACGCTTTTT+AGG + Chr3:56517653-56517672 None:intergenic 35.0%
!! TCTAGAAATGTTGACTTGTG+GGG + Chr3:56512272-56512291 None:intergenic 35.0%
!! TGTATCTATCTGATGATGGT+GGG - Chr3:56511314-56511333 MsG0380014562.01.T01:intron 35.0%
!!! CTGCTACTTTTGCAAAACAT+TGG - Chr3:56511368-56511387 MsG0380014562.01.T01:intron 35.0%
!!! TTTTTTACCAAGTTGTGCCT+CGG + Chr3:56513405-56513424 None:intergenic 35.0%
AGAAATAGAGCCACCAATGA+TGG - Chr3:56511234-56511253 MsG0380014562.01.T01:intron 40.0%
AGAAGAAGATGGAGGAAAGT+TGG - Chr3:56510608-56510627 MsG0380014562.01.T01:CDS 40.0%
AGCTGGAGCTATGAATTCAT+TGG - Chr3:56518130-56518149 MsG0380014562.01.T01:CDS 40.0%
AGTCAAATAAAGTCAGACCG+AGG - Chr3:56513385-56513404 MsG0380014562.01.T01:intron 40.0%
ATAGGGACTAAAAATGCCGA+TGG - Chr3:56512660-56512679 MsG0380014562.01.T01:intron 40.0%
CAAATACATGCGTGTGTTTG+TGG + Chr3:56510944-56510963 None:intergenic 40.0%
CAACAAGAAGAAGAAGATGG+AGG - Chr3:56510600-56510619 MsG0380014562.01.T01:CDS 40.0%
CGAGCTAAATACACCAAAGT+TGG + Chr3:56518077-56518096 None:intergenic 40.0%
GAACATTACGATGAACGGTT+TGG + Chr3:56513203-56513222 None:intergenic 40.0%
GATCTAGGTAGAGTAGTTTG+GGG - Chr3:56511865-56511884 MsG0380014562.01.T01:intron 40.0%
GCATATGGCTGCAAATAATG+AGG + Chr3:56510532-56510551 None:intergenic 40.0%
GGAAAGGAAGGCTTATCTAT+AGG - Chr3:56510496-56510515 MsG0380014562.01.T01:CDS 40.0%
GGATCTAGGTAGAGTAGTTT+GGG - Chr3:56511864-56511883 MsG0380014562.01.T01:intron 40.0%
GGTATGTAAGCACTCTCTAT+TGG - Chr3:56511492-56511511 MsG0380014562.01.T01:intron 40.0%
TACACACTCAACTTCTCAGA+TGG + Chr3:56511298-56511317 None:intergenic 40.0%
TATCACCACAACTACAAAGC+TGG - Chr3:56518113-56518132 MsG0380014562.01.T01:CDS 40.0%
TATCCTTCTAGACATGACCA+TGG - Chr3:56517947-56517966 MsG0380014562.01.T01:CDS 40.0%
TCCTCATACTTAAGAGAGAG+AGG + Chr3:56514291-56514310 None:intergenic 40.0%
TCCTCTCTCTCTTAAGTATG+AGG - Chr3:56514287-56514306 MsG0380014562.01.T01:intron 40.0%
TCGTAATGTTCAGAGTTCTG+AGG - Chr3:56513212-56513231 MsG0380014562.01.T01:intron 40.0%
TCTTTGGTAGGATCTAACGA+TGG + Chr3:56513787-56513806 None:intergenic 40.0%
TGAAGGGTTGTCTGAAAACA+AGG + Chr3:56510707-56510726 None:intergenic 40.0%
TGACCATGGCACAATTAACT+TGG - Chr3:56517961-56517980 MsG0380014562.01.T01:CDS 40.0%
TGGTTTCATGTTGCCAACTT+TGG - Chr3:56518061-56518080 MsG0380014562.01.T01:CDS 40.0%
TTCTCACTCAAGCTTTCAGA+TGG - Chr3:56510679-56510698 MsG0380014562.01.T01:intron 40.0%
! AGCATAGGGGATTTTCTCAA+TGG - Chr3:56517843-56517862 MsG0380014562.01.T01:intron 40.0%
! AGCCTCTAAGAGAGCATAAA+AGG + Chr3:56511350-56511369 None:intergenic 40.0%
! ATCATTGGTGGCTCTATTTC+TGG + Chr3:56511235-56511254 None:intergenic 40.0%
! ATTGGCTACCTTTTTGCAAG+AGG - Chr3:56511386-56511405 MsG0380014562.01.T01:intron 40.0%
! CGTAATGTTCAGAGTTCTGA+GGG - Chr3:56513213-56513232 MsG0380014562.01.T01:intron 40.0%
! GAAGCACGTTTAAAGCATAG+GGG - Chr3:56517830-56517849 MsG0380014562.01.T01:intron 40.0%
! GCATAGGGGATTTTCTCAAT+GGG - Chr3:56517844-56517863 MsG0380014562.01.T01:intron 40.0%
! TGCTTTAAACGTGCTTCTTG+AGG + Chr3:56517827-56517846 None:intergenic 40.0%
! TGGTGTCAATCTCATTTGTG+TGG + Chr3:56513280-56513299 None:intergenic 40.0%
! TGTTTTCAGACAACCCTTCA+AGG - Chr3:56510707-56510726 MsG0380014562.01.T01:intron 40.0%
!! AAGATGGAGGAAAGTTGGTA+TGG - Chr3:56510613-56510632 MsG0380014562.01.T01:CDS 40.0%
!! GTGTATCTATCTGATGATGG+TGG - Chr3:56511313-56511332 MsG0380014562.01.T01:intron 40.0%
!! TACGGATTTGTTGAAGGAGT+TGG - Chr3:56513642-56513661 MsG0380014562.01.T01:intron 40.0%
!!! TAAGGTTTTAGGTGACGATG+TGG + Chr3:56513300-56513319 None:intergenic 40.0%
AAAATATGCAGCAGGTGACC+TGG + Chr3:56511425-56511444 None:intergenic 45.0%
AAATATGCAGCAGGTGACCT+GGG + Chr3:56511424-56511443 None:intergenic 45.0%
AACTACTCTACCTAGATCCG+CGG + Chr3:56511863-56511882 None:intergenic 45.0%
ACATCTACTCCTACCTACAC+TGG - Chr3:56514094-56514113 MsG0380014562.01.T01:intron 45.0%
ATACATGCGTGTGTTTGTGG+CGG + Chr3:56510941-56510960 None:intergenic 45.0%
CATACAACTGTTAGGCCTTC+TGG - Chr3:56514234-56514253 MsG0380014562.01.T01:intron 45.0%
CGGATCTAGGTAGAGTAGTT+TGG - Chr3:56511863-56511882 MsG0380014562.01.T01:intron 45.0%
CTTGCTGCAGAACTATGGTT+TGG - Chr3:56510645-56510664 MsG0380014562.01.T01:intron 45.0%
GTAGAGCCAGATGAAGCATA+TGG + Chr3:56510547-56510566 None:intergenic 45.0%
TCAAGGATAGACTCTCCCAA+AGG - Chr3:56510724-56510743 MsG0380014562.01.T01:intron 45.0%
TCAATTGCCAAAAATCGGCG+TGG - Chr3:56512370-56512389 MsG0380014562.01.T01:intron 45.0%
TGAGCATATGTTGCCAGAAG+TGG - Chr3:56511186-56511205 MsG0380014562.01.T01:intron 45.0%
TGGGAGAGTCTATCCTTGAA+GGG + Chr3:56510723-56510742 None:intergenic 45.0%
TTGCAGCCATATGCTTCATC+TGG - Chr3:56510538-56510557 MsG0380014562.01.T01:CDS 45.0%
TTGGGAGAGTCTATCCTTGA+AGG + Chr3:56510724-56510743 None:intergenic 45.0%
! AGAGGTTTAAAGTTGAGCCC+AGG - Chr3:56511404-56511423 MsG0380014562.01.T01:intron 45.0%
! GTATGCTTGCTGCAGAACTA+TGG - Chr3:56510640-56510659 MsG0380014562.01.T01:intron 45.0%
! TAGCTCCAGCTTTGTAGTTG+TGG + Chr3:56518121-56518140 None:intergenic 45.0%
!! GGAGGAAAGTTGGTATGGTT+TGG - Chr3:56510618-56510637 MsG0380014562.01.T01:CDS 45.0%
!! TGTTGATTCACACCAGTGGT+TGG + Chr3:56514264-56514283 None:intergenic 45.0%
!! TTAAATATATTAAGAAAAAT+TGG - Chr3:56518189-56518208 MsG0380014562.01.T01:CDS 5.0%
!!! TAATTTTTCTAATATATAAT+AGG - Chr3:56512138-56512157 MsG0380014562.01.T01:intron 5.0%
!!! TATATTTTAAAAAAAGTATT+AGG + Chr3:56511796-56511815 None:intergenic 5.0%
AAAATCGGCGTGGAAGAGGT+TGG - Chr3:56512380-56512399 MsG0380014562.01.T01:intron 50.0%
AAATCGGCGTGGAAGAGGTT+AGG - Chr3:56512381-56512400 MsG0380014562.01.T01:intron 50.0%
ACAACTGTTAGGCCTTCTGG+AGG - Chr3:56514237-56514256 MsG0380014562.01.T01:intron 50.0%
ACGAGCGTGATTCTTTGTGG+TGG + Chr3:56514184-56514203 None:intergenic 50.0%
AGGAAATTCTAGCCCGTGCT+TGG - Chr3:56514307-56514326 MsG0380014562.01.T01:intron 50.0%
CAACTGTGCTACGACTCTTC+CGG - Chr3:56511889-56511908 MsG0380014562.01.T01:intron 50.0%
GTGCCATGGTCATGTCTAGA+AGG + Chr3:56517953-56517972 None:intergenic 50.0%
TGCACGAGCGTGATTCTTTG+TGG + Chr3:56514187-56514206 None:intergenic 50.0%
!! AGTTCTGAGGGAGCCTACAA+TGG - Chr3:56513225-56513244 MsG0380014562.01.T01:intron 50.0%
!!! ACCTCTTCCACGCCGATTTT+TGG + Chr3:56512380-56512399 None:intergenic 50.0%
AGTCAGACCGAGGCACAACT+TGG - Chr3:56513395-56513414 MsG0380014562.01.T01:intron 55.0%
ATGGAAACCCGTGCCAAGCA+CGG + Chr3:56514323-56514342 None:intergenic 55.0%
ATTCTAGCCCGTGCTTGGCA+CGG - Chr3:56514312-56514331 MsG0380014562.01.T01:intron 55.0%
GCCAAAAATCGGCGTGGAAG+AGG - Chr3:56512376-56512395 MsG0380014562.01.T01:intron 55.0%
CCTAGATCCGCGGCTGTATG+CGG + Chr3:56511853-56511872 None:intergenic 60.0%
CGGCGTGGAAGAGGTTAGGT+TGG - Chr3:56512385-56512404 MsG0380014562.01.T01:intron 60.0%
TGGAAACCCGTGCCAAGCAC+GGG + Chr3:56514322-56514341 None:intergenic 60.0%
TTCTAGCCCGTGCTTGGCAC+GGG - Chr3:56514313-56514332 MsG0380014562.01.T01:intron 60.0%
! CCAGTGGTTGGTCCTCCAGA+AGG + Chr3:56514252-56514271 None:intergenic 60.0%
! CCTTCTGGAGGACCAACCAC+TGG - Chr3:56514249-56514268 MsG0380014562.01.T01:intron 60.0%
ATGGGCAGAGGCAGAGGCAG+AGG - Chr3:56510441-56510460 MsG0380014562.01.T01:CDS 65.0%
CCGCATACAGCCGCGGATCT+AGG - Chr3:56511850-56511869 MsG0380014562.01.T01:intron 65.0%
GTGGACTCCGCATACAGCCG+CGG - Chr3:56511843-56511862 MsG0380014562.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 56510441 56518223 56510441 ID=MsG0380014562.01;Name=MsG0380014562.01
Chr3 mRNA 56510441 56518223 56510441 ID=MsG0380014562.01.T01;Parent=MsG0380014562.01;Name=MsG0380014562.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0.66|0.5|1|0.66|0.75|4|0|339
Chr3 exon 56517862 56518223 56517862 ID=MsG0380014562.01.T01:exon:3097;Parent=MsG0380014562.01.T01
Chr3 exon 56517172 56517481 56517172 ID=MsG0380014562.01.T01:exon:3096;Parent=MsG0380014562.01.T01
Chr3 exon 56510757 56510897 56510757 ID=MsG0380014562.01.T01:exon:3095;Parent=MsG0380014562.01.T01
Chr3 exon 56510441 56510647 56510441 ID=MsG0380014562.01.T01:exon:3094;Parent=MsG0380014562.01.T01
Chr3 CDS 56517862 56518223 56517862 ID=MsG0380014562.01.T01:cds;Parent=MsG0380014562.01.T01
Chr3 CDS 56517172 56517481 56517172 ID=MsG0380014562.01.T01:cds;Parent=MsG0380014562.01.T01
Chr3 CDS 56510757 56510897 56510757 ID=MsG0380014562.01.T01:cds;Parent=MsG0380014562.01.T01
Chr3 CDS 56510441 56510647 56510441 ID=MsG0380014562.01.T01:cds;Parent=MsG0380014562.01.T01
Gene Sequence

>MsG0380014562.01.T01

ATGGGCAGAGGCAGAGGCAGAGGCGTGTACTCTCCTTTGTTTGAAACAAAGAAAGGGAAAGGAAGGCTTATCTATAGGCTCTTTTCAACCTCATTATTTGCAGCCATATGCTTCATCTGGCTCTACAGATTCAACCACATCATAACCACAAACTATACTCAACAAGAAGAAGAAGATGGAGGAAAGTTGGTATGGTTTGGTATGCTTGCTGCAGAACTATGGTTTGGTTTTTATTGGATTCTCACTCAAGCTTTCAGATGGAACCTTGTTTTCAGACAACCCTTCAAGGATAGACTCTCCCAAAGGTCCATTTTATTTTTATCTACTTACACTCATTTTAGATTACCTTATTATTATTTTCTATATGAGCATATGTTGCCAGAAGTGGACATATTTGTATGCACGGCAGATCCAGAAATAGAGCCACCAATGATGGTAATAAACACAGTGTTATCTGTTATGGCTTTTGATTATCCATCTGAGAAGTTGAGTGTGTATCTATCTGATGATGGTGGGTCAGAATTAACCTTTTATGCTCTCTTAGAGGCTGCTACTTTTGCAAAACATTGGCTACCTTTTTGCAAGAGGTTTAAAGTTGAGCCCAGGTCACCTGCTGCATATTTTAATACCATCAAGGACACTAATATTGCTAATGAGTTGGTAGCTATAAAGAAATTGTACAGTGAAATGGAAAAACGAATTGAAGATGCAACGAAGTTGAAAAGAGTACCTCAAGAAGCACGTTTAAAGCATAGGGGATTTTCTCAATGGGATTCATATTCATCTAAACGTGACCATGACACAATTCTTCAAATACTACTTCATAAAAAGGACCCTGATAACTCTAAAGATGTACATGGTTTCATGTTGCCAACTTTGGTGTATTTAGCTCGTGAAAAGAGGCCTCAATATCACCACAACTACAAAGCTGGAGCTATGAATTCATTGGTATACATTACTCCCTCTATCACTTTTTATAAACAATTTAAATATATTAAGAAAAATTGGAAGTGTAACTAA
Protein sequence

>MsG0380014562.01.T01

MGRGRGRGVYSPLFETKKGKGRLIYRLFSTSLFAAICFIWLYRFNHIITTNYTQQEEEDGGKLVWFGMLAAELWFGFYWILTQAFRWNLVFRQPFKDRLSQRSILFLSTYTHFRLPYYYFLYEHMLPEVDIFVCTADPEIEPPMMVINTVLSVMAFDYPSEKLSVYLSDDGGSELTFYALLEAATFAKHWLPFCKRFKVEPRSPAAYFNTIKDTNIANELVAIKKLYSEMEKRIEDATKLKRVPQEARLKHRGFSQWDSYSSKRDHDTILQILLHKKDPDNSKDVHGFMLPTLVYLAREKRPQYHHNYKAGAMNSLVYITPSITFYKQFKYIKKNWKCN*