Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041598.01.T01 | KDP23430.1 | 82.589 | 224 | 21 | 2 | 8 | 231 | 29 | 234 | 2.05E-121 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041598.01.T01 | Q84JM4 | 75.877 | 228 | 36 | 3 | 3 | 230 | 25 | 233 | 8.93E-108 | 338 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041598.01.T01 | A0A067JTV1 | 82.589 | 224 | 21 | 2 | 8 | 231 | 29 | 234 | 9.80e-122 | 363 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048374.01 | MsG0780041598.01 | 0.843440 | 1.399727e-58 | 2.190192e-55 |
| MsG0180003411.01 | MsG0780041598.01 | 0.841316 | 5.115676e-58 | 7.487641e-55 |
| MsG0180005985.01 | MsG0780041598.01 | 0.807995 | 3.849308e-50 | 2.175390e-47 |
| MsG0280006304.01 | MsG0780041598.01 | 0.842087 | 3.202974e-58 | 4.803150e-55 |
| MsG0780041598.01 | MsG0880042783.01 | 0.802435 | 5.617278e-49 | 2.751485e-46 |
| MsG0780041598.01 | MsG0880045841.01 | 0.828011 | 1.139270e-54 | 1.118480e-51 |
| MsG0280010866.01 | MsG0780041598.01 | 0.800920 | 1.149128e-48 | 5.416723e-46 |
| MsG0280011055.01 | MsG0780041598.01 | 0.819449 | 1.154596e-52 | 8.887934e-50 |
| MsG0280011056.01 | MsG0780041598.01 | 0.801009 | 1.102107e-48 | 5.206997e-46 |
| MsG0280011075.01 | MsG0780041598.01 | 0.819112 | 1.377864e-52 | 1.050774e-49 |
| MsG0380014562.01 | MsG0780041598.01 | 0.811082 | 8.365551e-51 | 5.129924e-48 |
| MsG0480019395.01 | MsG0780041598.01 | 0.843174 | 1.647942e-58 | 2.556715e-55 |
| MsG0480021216.01 | MsG0780041598.01 | 0.801341 | 9.426188e-49 | 4.490613e-46 |
| MsG0480022317.01 | MsG0780041598.01 | 0.835499 | 1.619420e-56 | 1.983944e-53 |
| MsG0480022398.01 | MsG0780041598.01 | 0.882726 | 8.178444e-71 | 5.037812e-67 |
| MsG0480023697.01 | MsG0780041598.01 | 0.809919 | 1.491313e-50 | 8.868194e-48 |
| MsG0580024770.01 | MsG0780041598.01 | 0.859976 | 2.847718e-63 | 7.661967e-60 |
| MsG0580025128.01 | MsG0780041598.01 | 0.845544 | 3.800642e-59 | 6.355446e-56 |
| MsG0380015495.01 | MsG0780041598.01 | 0.811151 | 8.081251e-51 | 4.964605e-48 |
| MsG0380016927.01 | MsG0780041598.01 | 0.803690 | 3.091142e-49 | 1.563461e-46 |
| MsG0380017410.01 | MsG0780041598.01 | 0.807228 | 5.601383e-50 | 3.102894e-47 |
| MsG0580027627.01 | MsG0780041598.01 | 0.801093 | 1.059509e-48 | 5.016313e-46 |
| MsG0580028472.01 | MsG0780041598.01 | 0.819397 | 1.186966e-52 | 9.123208e-50 |
| MsG0580029214.01 | MsG0780041598.01 | 0.846808 | 1.721594e-59 | 2.998901e-56 |
| MsG0280007803.01 | MsG0780041598.01 | 0.823199 | 1.575252e-53 | 1.347215e-50 |
| MsG0280007829.01 | MsG0780041598.01 | 0.815792 | 7.710069e-52 | 5.367921e-49 |
| MsG0280007830.01 | MsG0780041598.01 | 0.828239 | 1.003952e-54 | 9.921260e-52 |
| MsG0780035936.01 | MsG0780041598.01 | 0.801775 | 7.678088e-49 | 3.698114e-46 |
| MsG0780037920.01 | MsG0780041598.01 | 0.816703 | 4.824648e-52 | 3.443397e-49 |
| MsG0780039497.01 | MsG0780041598.01 | 0.816260 | 6.059635e-52 | 4.273174e-49 |
| MsG0780039530.01 | MsG0780041598.01 | 0.852054 | 5.935036e-61 | 1.225087e-57 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041598.01.T01 | MTR_1g083700 | 83.036 | 224 | 20 | 2 | 8 | 231 | 29 | 234 | 2.13e-122 | 375 |
| MsG0780041598.01.T01 | MTR_7g112460 | 88.341 | 223 | 8 | 2 | 8 | 230 | 29 | 233 | 5.41e-120 | 368 |
| MsG0780041598.01.T01 | MTR_4g120900 | 73.991 | 223 | 40 | 2 | 8 | 230 | 29 | 233 | 2.59e-105 | 329 |
| MsG0780041598.01.T01 | MTR_4g009840 | 62.745 | 255 | 71 | 4 | 8 | 256 | 29 | 265 | 1.63e-98 | 311 |
| MsG0780041598.01.T01 | MTR_2g104140 | 69.333 | 225 | 50 | 3 | 8 | 231 | 29 | 235 | 2.34e-98 | 310 |
| MsG0780041598.01.T01 | MTR_2g104140 | 69.333 | 225 | 50 | 3 | 8 | 231 | 44 | 250 | 3.35e-98 | 310 |
| MsG0780041598.01.T01 | MTR_2g104140 | 69.333 | 225 | 50 | 3 | 8 | 231 | 29 | 235 | 3.36e-98 | 310 |
| MsG0780041598.01.T01 | MTR_2g104140 | 69.333 | 225 | 50 | 3 | 8 | 231 | 44 | 250 | 3.96e-98 | 310 |
| MsG0780041598.01.T01 | MTR_2g104140 | 69.333 | 225 | 50 | 3 | 8 | 231 | 44 | 250 | 4.39e-98 | 310 |
| MsG0780041598.01.T01 | MTR_4g114980 | 69.298 | 228 | 50 | 4 | 3 | 229 | 25 | 233 | 2.57e-97 | 308 |
| MsG0780041598.01.T01 | MTR_4g114980 | 69.298 | 228 | 50 | 4 | 3 | 229 | 25 | 233 | 3.36e-97 | 308 |
| MsG0780041598.01.T01 | MTR_2g435370 | 50.000 | 214 | 88 | 3 | 5 | 217 | 26 | 221 | 1.97e-58 | 200 |
| MsG0780041598.01.T01 | MTR_2g065670 | 45.133 | 226 | 100 | 2 | 8 | 232 | 2 | 204 | 1.25e-55 | 190 |
| MsG0780041598.01.T01 | MTR_1g012820 | 56.291 | 151 | 66 | 0 | 8 | 158 | 30 | 180 | 1.56e-53 | 183 |
| MsG0780041598.01.T01 | MTR_1g019450 | 50.336 | 149 | 74 | 0 | 8 | 156 | 31 | 179 | 4.34e-47 | 155 |
| MsG0780041598.01.T01 | MTR_1g019470 | 49.007 | 151 | 77 | 0 | 8 | 158 | 31 | 181 | 9.03e-46 | 152 |
| MsG0780041598.01.T01 | MTR_2g435440 | 38.863 | 211 | 72 | 4 | 8 | 217 | 29 | 183 | 6.25e-37 | 138 |
| MsG0780041598.01.T01 | MTR_4g109730 | 50.407 | 123 | 61 | 0 | 8 | 130 | 30 | 152 | 1.53e-33 | 122 |
| MsG0780041598.01.T01 | MTR_7g069750 | 77.778 | 63 | 14 | 0 | 79 | 141 | 11 | 73 | 4.73e-28 | 102 |
| MsG0780041598.01.T01 | MTR_7g056757 | 60.000 | 55 | 22 | 0 | 8 | 62 | 27 | 81 | 3.69e-19 | 79.7 |
| MsG0780041598.01.T01 | MTR_7g056777 | 34.677 | 124 | 74 | 2 | 1 | 118 | 18 | 140 | 2.59e-18 | 79.3 |
| MsG0780041598.01.T01 | MTR_7g056753 | 53.191 | 47 | 21 | 1 | 1 | 47 | 39 | 84 | 1.61e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041598.01.T01 | AT5G27030 | 75.877 | 228 | 36 | 3 | 3 | 230 | 25 | 233 | 9.11e-109 | 338 |
| MsG0780041598.01.T01 | AT5G27030 | 75.877 | 228 | 36 | 3 | 3 | 230 | 25 | 233 | 1.69e-108 | 338 |
| MsG0780041598.01.T01 | AT3G16830 | 73.991 | 223 | 40 | 2 | 8 | 230 | 29 | 233 | 1.40e-105 | 330 |
| MsG0780041598.01.T01 | AT1G15750 | 63.922 | 255 | 68 | 4 | 8 | 256 | 29 | 265 | 5.93e-102 | 320 |
| MsG0780041598.01.T01 | AT1G15750 | 63.922 | 255 | 68 | 4 | 8 | 256 | 29 | 265 | 5.93e-102 | 320 |
| MsG0780041598.01.T01 | AT1G15750 | 63.922 | 255 | 68 | 4 | 8 | 256 | 29 | 265 | 5.93e-102 | 320 |
| MsG0780041598.01.T01 | AT1G15750 | 63.922 | 255 | 68 | 4 | 8 | 256 | 29 | 265 | 5.93e-102 | 320 |
| MsG0780041598.01.T01 | AT1G80490 | 70.222 | 225 | 48 | 3 | 8 | 231 | 29 | 235 | 4.65e-99 | 312 |
| MsG0780041598.01.T01 | AT1G80490 | 70.222 | 225 | 48 | 3 | 8 | 231 | 29 | 235 | 4.65e-99 | 312 |
| MsG0780041598.01.T01 | AT1G80490 | 70.222 | 225 | 48 | 3 | 8 | 231 | 29 | 235 | 4.83e-99 | 312 |
| MsG0780041598.01.T01 | AT3G15880 | 68.559 | 229 | 52 | 4 | 3 | 230 | 25 | 234 | 1.77e-96 | 306 |
| MsG0780041598.01.T01 | AT3G15880 | 68.559 | 229 | 52 | 4 | 3 | 230 | 25 | 234 | 1.84e-96 | 306 |
| MsG0780041598.01.T01 | AT3G15880 | 68.559 | 229 | 52 | 4 | 3 | 230 | 25 | 234 | 1.84e-96 | 306 |
| MsG0780041598.01.T01 | AT3G15880 | 68.559 | 229 | 52 | 4 | 3 | 230 | 25 | 234 | 1.87e-96 | 306 |
| MsG0780041598.01.T01 | AT2G25420 | 32.609 | 138 | 92 | 1 | 8 | 145 | 32 | 168 | 5.67e-20 | 89.4 |
| MsG0780041598.01.T01 | AT2G25420 | 32.609 | 138 | 92 | 1 | 8 | 145 | 32 | 168 | 6.07e-20 | 89.4 |
| MsG0780041598.01.T01 | AT2G25420 | 32.609 | 138 | 92 | 1 | 8 | 145 | 32 | 168 | 8.76e-20 | 89.0 |
| MsG0780041598.01.T01 | AT2G25420 | 32.609 | 138 | 92 | 1 | 8 | 145 | 32 | 168 | 8.98e-20 | 89.0 |
Find 51 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTAACTCTTACTAATTTC+AGG | 0.225299 | 7:-92869573 | MsG0780041598.01.T01:intron |
| GAAGTTGAGAAGTATTTATC+AGG | 0.235858 | 7:-92869881 | MsG0780041598.01.T01:CDS |
| CATAATCCCTCGAGCAGTTT+TGG | 0.291403 | 7:+92869259 | None:intergenic |
| TGAAAATATTCTTTGAAATC+AGG | 0.312087 | 7:-92869826 | MsG0780041598.01.T01:CDS |
| TTTATATCTGGGTTTGGCCT+TGG | 0.322357 | 7:+92868530 | None:intergenic |
| CTTCAATATGAAATACTTTG+AGG | 0.352288 | 7:-92869930 | MsG0780041598.01.T01:CDS |
| GGCTTTGCAACAGCAGCAAC+TGG | 0.369168 | 7:+92868440 | None:intergenic |
| ACTAATATCTCAACAGCCTT+TGG | 0.391172 | 7:+92869655 | None:intergenic |
| CCTGCTGCTTATACTTCTCT+TGG | 0.397243 | 7:-92868419 | MsG0780041598.01.T01:CDS |
| AATACCTGGAAGCACTTGAT+AGG | 0.415450 | 7:-92869796 | MsG0780041598.01.T01:intron |
| CGTGTAGGTGAGAAAGAATC+CGG | 0.416180 | 7:-92869959 | MsG0780041598.01.T01:CDS |
| TATACCTATCAAGTGCTTCC+AGG | 0.420978 | 7:+92869792 | None:intergenic |
| GATAAGGATTATAGTAGAAT+AGG | 0.428185 | 7:+92868601 | None:intergenic |
| TTTGTTAATACAGTTTGAAC+TGG | 0.432347 | 7:-92868573 | MsG0780041598.01.T01:CDS |
| AATGAGCAGCTGTCTAAGTA+TGG | 0.433756 | 7:-92869287 | MsG0780041598.01.T01:CDS |
| GTATCTATTATCATCAACTT+TGG | 0.452847 | 7:+92869853 | None:intergenic |
| GTATTAACAAAGGGTGGATA+AGG | 0.456618 | 7:+92868585 | None:intergenic |
| AATTAGTAAGAGTTAACAGC+TGG | 0.473156 | 7:+92869578 | None:intergenic |
| CTTCTCTTGGAGGGAGCTCA+TGG | 0.476110 | 7:-92868406 | MsG0780041598.01.T01:CDS |
| ATAATGCTTGTTTACCGTGT+AGG | 0.490744 | 7:-92869974 | MsG0780041598.01.T01:CDS |
| AAAAGTACAGGCTGGTGAAT+GGG | 0.495810 | 7:-92869906 | MsG0780041598.01.T01:CDS |
| GCTGCTTATACTTCTCTTGG+AGG | 0.499796 | 7:-92868416 | MsG0780041598.01.T01:CDS |
| TGTTGGTGCTAGAGGACCAT+TGG | 0.522439 | 7:+92868475 | None:intergenic |
| AAGTTGAGAAGTATTTATCA+GGG | 0.525650 | 7:-92869880 | MsG0780041598.01.T01:CDS |
| CCAAGAGAAGTATAAGCAGC+AGG | 0.528660 | 7:+92868419 | None:intergenic |
| GCAGCAACTGGAAGATTGAC+AGG | 0.535061 | 7:+92868452 | None:intergenic |
| ATCTTGACGACTTCAGAGTA+GGG | 0.535374 | 7:+92869177 | None:intergenic |
| CTGCTTATACTTCTCTTGGA+GGG | 0.539881 | 7:-92868415 | MsG0780041598.01.T01:CDS |
| GTTCAAACTGTATTAACAAA+GGG | 0.562003 | 7:+92868576 | None:intergenic |
| AATCAGGAAGCAGAAATACC+TGG | 0.565513 | 7:-92869810 | MsG0780041598.01.T01:CDS |
| AATCTTGACGACTTCAGAGT+AGG | 0.566734 | 7:+92869176 | None:intergenic |
| AAAGGCTGTTGAGATATTAG+TGG | 0.567393 | 7:-92869653 | MsG0780041598.01.T01:CDS |
| TTGACAGGTGTTGGTGCTAG+AGG | 0.577045 | 7:+92868467 | None:intergenic |
| AGTTCAAACTGTATTAACAA+AGG | 0.587648 | 7:+92868575 | None:intergenic |
| GGATTATAGTAGAATAGGCA+AGG | 0.588614 | 7:+92868606 | None:intergenic |
| CTCTGAAGTCGTCAAGATTG+CGG | 0.590907 | 7:-92869172 | MsG0780041598.01.T01:CDS |
| TGCGGACATTAATCAATCAA+AGG | 0.592300 | 7:-92869154 | MsG0780041598.01.T01:intron |
| AGTATTCTCGACTTTCAATG+AGG | 0.604092 | 7:-92869620 | MsG0780041598.01.T01:CDS |
| CGGATTCTTTCTCACCTACA+CGG | 0.606377 | 7:+92869960 | None:intergenic |
| ACTGGAAGATTGACAGGTGT+TGG | 0.608789 | 7:+92868458 | None:intergenic |
| AAGGCTGTTGAGATATTAGT+GGG | 0.624809 | 7:-92869652 | MsG0780041598.01.T01:CDS |
| CACTCATGTACACCTTCCAA+TGG | 0.625699 | 7:-92868491 | MsG0780041598.01.T01:CDS |
| GGTGACACCAAAACTGCTCG+AGG | 0.627711 | 7:-92869266 | MsG0780041598.01.T01:CDS |
| CAAACTGTATTAACAAAGGG+TGG | 0.628869 | 7:+92868579 | None:intergenic |
| AGTACAGGCTGGTGAATGGG+AGG | 0.637261 | 7:-92869903 | MsG0780041598.01.T01:CDS |
| ATTAGTAAGAGTTAACAGCT+GGG | 0.649458 | 7:+92869579 | None:intergenic |
| TAGGGAAGACAAGCTTATCA+CGG | 0.659481 | 7:+92869195 | None:intergenic |
| GTGACACCAAAACTGCTCGA+GGG | 0.659935 | 7:-92869265 | MsG0780041598.01.T01:CDS |
| GTGTAGGTGAGAAAGAATCC+GGG | 0.661145 | 7:-92869958 | MsG0780041598.01.T01:CDS |
| GGTGCTAGAGGACCATTGGA+AGG | 0.683039 | 7:+92868479 | None:intergenic |
| ACAAGCTTATCACGGAACAG+AGG | 0.688697 | 7:+92869203 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTTTCATTAATTAATT+TGG | - | Chr7:92869456-92869475 | MsG0780041598.01.T01:intron | 10.0% |
| !!! | ATAAATAAAGTTTTTATATC+TGG | + | Chr7:92869793-92869812 | None:intergenic | 10.0% |
| !!! | CATTTTTCATTAATTAATTT+GGG | - | Chr7:92869457-92869476 | MsG0780041598.01.T01:intron | 10.0% |
| !!! | TAAATAAAGTTTTTATATCT+GGG | + | Chr7:92869792-92869811 | None:intergenic | 10.0% |
| !! | ATCCGAAAATATAAATTAAA+TGG | + | Chr7:92869667-92869686 | None:intergenic | 15.0% |
| !! | TCCGAAAATATAAATTAAAT+GGG | + | Chr7:92869666-92869685 | None:intergenic | 15.0% |
| !!! | AAATTAGATTTTTAAGTGTA+AGG | + | Chr7:92869960-92869979 | None:intergenic | 15.0% |
| !!! | ACCCATTTAATTTATATTTT+CGG | - | Chr7:92869662-92869681 | MsG0780041598.01.T01:CDS | 15.0% |
| !!! | GTTTGATGTTTTTAAATTTT+AGG | - | Chr7:92868621-92868640 | MsG0780041598.01.T01:intron | 15.0% |
| !!! | TAAATTCTAATGAATTTTGT+GGG | + | Chr7:92869239-92869258 | None:intergenic | 15.0% |
| !!! | TTAAATGCACAAAATTTTAT+AGG | - | Chr7:92869585-92869604 | MsG0780041598.01.T01:CDS | 15.0% |
| !!! | TTACAATTCTTAATCATTTT+TGG | - | Chr7:92868548-92868567 | MsG0780041598.01.T01:CDS | 15.0% |
| !! | CAAGTATAGAAAAAACTTAT+TGG | - | Chr7:92869523-92869542 | MsG0780041598.01.T01:intron | 20.0% |
| !! | GATATAGTATTTGTATGTAT+TGG | + | Chr7:92869345-92869364 | None:intergenic | 20.0% |
| !!! | AACCAATTTTTTAAAATGCA+AGG | + | Chr7:92869937-92869956 | None:intergenic | 20.0% |
| !!! | GATTTCAAAGAATATTTTCA+TGG | + | Chr7:92868482-92868501 | None:intergenic | 20.0% |
| !!! | GTAAATTCTAATGAATTTTG+TGG | + | Chr7:92869240-92869259 | None:intergenic | 20.0% |
| !!! | TACCTTGCATTTTAAAAAAT+TGG | - | Chr7:92869932-92869951 | MsG0780041598.01.T01:CDS | 20.0% |
| !!! | TGAAAATATTCTTTGAAATC+AGG | - | Chr7:92868482-92868501 | MsG0780041598.01.T01:CDS | 20.0% |
| ! | AAGCAGTTAATTAGAAAACA+CGG | + | Chr7:92869262-92869281 | None:intergenic | 25.0% |
| ! | AGTATTTGTATGTATTGGAA+AGG | + | Chr7:92869340-92869359 | None:intergenic | 25.0% |
| ! | AGTTCAAACTGTATTAACAA+AGG | + | Chr7:92869736-92869755 | None:intergenic | 25.0% |
| ! | ATAATAGTAGATAAATGTGC+AGG | - | Chr7:92869187-92869206 | MsG0780041598.01.T01:CDS | 25.0% |
| ! | CTTCAATATGAAATACTTTG+AGG | - | Chr7:92868378-92868397 | MsG0780041598.01.T01:CDS | 25.0% |
| ! | CTTGATTAATGATAAGAGTT+TGG | - | Chr7:92869424-92869443 | MsG0780041598.01.T01:intron | 25.0% |
| ! | GAAATTGAAAGAAATTTGTG+TGG | - | Chr7:92869308-92869327 | MsG0780041598.01.T01:intron | 25.0% |
| ! | GATAAGGATTATAGTAGAAT+AGG | + | Chr7:92869710-92869729 | None:intergenic | 25.0% |
| ! | GTATCTATTATCATCAACTT+TGG | + | Chr7:92868458-92868477 | None:intergenic | 25.0% |
| ! | GTTCAAACTGTATTAACAAA+GGG | + | Chr7:92869735-92869754 | None:intergenic | 25.0% |
| ! | TGTTAACTCTTACTAATTTC+AGG | - | Chr7:92868735-92868754 | MsG0780041598.01.T01:intron | 25.0% |
| ! | TTTCATATTGAAGAAAAACC+CGG | + | Chr7:92868371-92868390 | None:intergenic | 25.0% |
| ! | TTTGTTAATACAGTTTGAAC+TGG | - | Chr7:92869735-92869754 | MsG0780041598.01.T01:intron | 25.0% |
| !! | AAAGTTTTTATATCTGGGTT+TGG | + | Chr7:92869787-92869806 | None:intergenic | 25.0% |
| !! | TATAGGAAGTTTCTTCTTTT+AGG | - | Chr7:92869602-92869621 | MsG0780041598.01.T01:CDS | 25.0% |
| !!! | AAGTTGAGAAGTATTTATCA+GGG | - | Chr7:92868428-92868447 | MsG0780041598.01.T01:CDS | 25.0% |
| AAGACTCATATAACGATAAC+AGG | - | Chr7:92868874-92868893 | MsG0780041598.01.T01:intron | 30.0% | |
| AATTAGTAAGAGTTAACAGC+TGG | + | Chr7:92868733-92868752 | None:intergenic | 30.0% | |
| AGACTCATATAACGATAACA+GGG | - | Chr7:92868875-92868894 | MsG0780041598.01.T01:intron | 30.0% | |
| AGAGTTAAAAAAGCTCATAG+AGG | - | Chr7:92869077-92869096 | MsG0780041598.01.T01:intron | 30.0% | |
| AGTCTTGCAGCTTAATAAAT+TGG | + | Chr7:92868965-92868984 | None:intergenic | 30.0% | |
| ATTAACTGCTTGTAGTTAGT+TGG | - | Chr7:92869271-92869290 | MsG0780041598.01.T01:CDS | 30.0% | |
| ATTAGTAAGAGTTAACAGCT+GGG | + | Chr7:92868732-92868751 | None:intergenic | 30.0% | |
| TAATAAATTGGCAAGTCTAC+TGG | + | Chr7:92868953-92868972 | None:intergenic | 30.0% | |
| TTAACTGCTTGTAGTTAGTT+GGG | - | Chr7:92869272-92869291 | MsG0780041598.01.T01:CDS | 30.0% | |
| TTGTATGCTGTATCTTATCT+TGG | - | Chr7:92868798-92868817 | MsG0780041598.01.T01:intron | 30.0% | |
| ! | ATACTTTGAGGAAAAAGTAC+AGG | - | Chr7:92868390-92868409 | MsG0780041598.01.T01:CDS | 30.0% |
| ! | ATTCTAATGAATTTTGTGGG+AGG | + | Chr7:92869236-92869255 | None:intergenic | 30.0% |
| ! | CAAACAATTTTGTATTACGC+TGG | + | Chr7:92868781-92868800 | None:intergenic | 30.0% |
| ! | CCTTTTCATTTCATATTGCA+GGG | - | Chr7:92868996-92869015 | MsG0780041598.01.T01:intron | 30.0% |
| ! | TCAACAATCAATTTTACGTG+AGG | + | Chr7:92869396-92869415 | None:intergenic | 30.0% |
| ! | TCCTTTTCATTTCATATTGC+AGG | - | Chr7:92868995-92869014 | MsG0780041598.01.T01:intron | 30.0% |
| !! | GAAGTTGAGAAGTATTTATC+AGG | - | Chr7:92868427-92868446 | MsG0780041598.01.T01:CDS | 30.0% |
| AAAGGCTGTTGAGATATTAG+TGG | - | Chr7:92868655-92868674 | MsG0780041598.01.T01:intron | 35.0% | |
| AAGGCTGTTGAGATATTAGT+GGG | - | Chr7:92868656-92868675 | MsG0780041598.01.T01:intron | 35.0% | |
| AATGATAAGAGTTTGGAAGC+TGG | - | Chr7:92869431-92869450 | MsG0780041598.01.T01:intron | 35.0% | |
| ACTAATATCTCAACAGCCTT+TGG | + | Chr7:92868656-92868675 | None:intergenic | 35.0% | |
| AGTATTCTCGACTTTCAATG+AGG | - | Chr7:92868688-92868707 | MsG0780041598.01.T01:intron | 35.0% | |
| CAAACTGTATTAACAAAGGG+TGG | + | Chr7:92869732-92869751 | None:intergenic | 35.0% | |
| CCCTGCAATATGAAATGAAA+AGG | + | Chr7:92868999-92869018 | None:intergenic | 35.0% | |
| GGATTATAGTAGAATAGGCA+AGG | + | Chr7:92869705-92869724 | None:intergenic | 35.0% | |
| GTATTAACAAAGGGTGGATA+AGG | + | Chr7:92869726-92869745 | None:intergenic | 35.0% | |
| TGCGGACATTAATCAATCAA+AGG | - | Chr7:92869154-92869173 | MsG0780041598.01.T01:intron | 35.0% | |
| TTTCTTAACATGTGCCCTAA+GGG | - | Chr7:92869625-92869644 | MsG0780041598.01.T01:CDS | 35.0% | |
| ! | ATTAACTAACTTGTGCCTTG+AGG | + | Chr7:92869499-92869518 | None:intergenic | 35.0% |
| ! | GTAGTTAGTTGGGTTCTTTT+TGG | - | Chr7:92869282-92869301 | MsG0780041598.01.T01:CDS | 35.0% |
| ! | TTAACTAACTTGTGCCTTGA+GGG | + | Chr7:92869498-92869517 | None:intergenic | 35.0% |
| ! | TTAGTTGGGTTCTTTTTGGA+TGG | - | Chr7:92869286-92869305 | MsG0780041598.01.T01:CDS | 35.0% |
| AATCAGGAAGCAGAAATACC+TGG | - | Chr7:92868498-92868517 | MsG0780041598.01.T01:CDS | 40.0% | |
| AATCTTGACGACTTCAGAGT+AGG | + | Chr7:92869135-92869154 | None:intergenic | 40.0% | |
| AATGAGCAGCTGTCTAAGTA+TGG | - | Chr7:92869021-92869040 | MsG0780041598.01.T01:intron | 40.0% | |
| ATCTTGACGACTTCAGAGTA+GGG | + | Chr7:92869134-92869153 | None:intergenic | 40.0% | |
| CTGCTTATACTTCTCTTGGA+GGG | - | Chr7:92869893-92869912 | MsG0780041598.01.T01:CDS | 40.0% | |
| GCAAGTCTACTGGTCATAAA+AGG | + | Chr7:92868943-92868962 | None:intergenic | 40.0% | |
| GTTTCTTAACATGTGCCCTA+AGG | - | Chr7:92869624-92869643 | MsG0780041598.01.T01:CDS | 40.0% | |
| TAGGGAAGACAAGCTTATCA+CGG | + | Chr7:92869116-92869135 | None:intergenic | 40.0% | |
| TATACCTATCAAGTGCTTCC+AGG | + | Chr7:92868519-92868538 | None:intergenic | 40.0% | |
| TTTATATCTGGGTTTGGCCT+TGG | + | Chr7:92869781-92869800 | None:intergenic | 40.0% | |
| ! | AAAAAGTACAGGCTGGTGAA+TGG | - | Chr7:92868401-92868420 | MsG0780041598.01.T01:CDS | 40.0% |
| ! | AAAAGTACAGGCTGGTGAAT+GGG | - | Chr7:92868402-92868421 | MsG0780041598.01.T01:CDS | 40.0% |
| ! | TTTGAGGAAAAAGTACAGGC+TGG | - | Chr7:92868394-92868413 | MsG0780041598.01.T01:CDS | 40.0% |
| ! | TTTTAGGCAAGACAAGCCAA+AGG | - | Chr7:92868637-92868656 | MsG0780041598.01.T01:intron | 40.0% |
| !! | AATACCTGGAAGCACTTGAT+AGG | - | Chr7:92868512-92868531 | MsG0780041598.01.T01:CDS | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | - | Chr7:92869481-92869500 | MsG0780041598.01.T01:intron | 40.0% |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | + | Chr7:92869642-92869661 | None:intergenic | 40.0% |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | + | Chr7:92869643-92869662 | None:intergenic | 40.0% |
| ACAAGCTTATCACGGAACAG+AGG | + | Chr7:92869108-92869127 | None:intergenic | 45.0% | |
| ACTGGAAGATTGACAGGTGT+TGG | + | Chr7:92869853-92869872 | None:intergenic | 45.0% | |
| CACCAGCTATGCAAAAACCA+AGG | - | Chr7:92869761-92869780 | MsG0780041598.01.T01:intron | 45.0% | |
| CACTCATGTACACCTTCCAA+TGG | - | Chr7:92869817-92869836 | MsG0780041598.01.T01:CDS | 45.0% | |
| CGGATTCTTTCTCACCTACA+CGG | + | Chr7:92868351-92868370 | None:intergenic | 45.0% | |
| CGTGTAGGTGAGAAAGAATC+CGG | - | Chr7:92868349-92868368 | MsG0780041598.01.T01:CDS | 45.0% | |
| GCTGCTTATACTTCTCTTGG+AGG | - | Chr7:92869892-92869911 | MsG0780041598.01.T01:CDS | 45.0% | |
| GTGTAGGTGAGAAAGAATCC+GGG | - | Chr7:92868350-92868369 | MsG0780041598.01.T01:CDS | 45.0% | |
| ! | ATTTTGTGGGAGGAGAGAGT+AGG | + | Chr7:92869226-92869245 | None:intergenic | 45.0% |
| ! | CATAATCCCTCGAGCAGTTT+TGG | + | Chr7:92869052-92869071 | None:intergenic | 45.0% |
| ! | CCAAGAGAAGTATAAGCAGC+AGG | + | Chr7:92869892-92869911 | None:intergenic | 45.0% |
| ! | CCTGCTGCTTATACTTCTCT+TGG | - | Chr7:92869889-92869908 | MsG0780041598.01.T01:CDS | 45.0% |
| !! | CTCTGAAGTCGTCAAGATTG+CGG | - | Chr7:92869136-92869155 | MsG0780041598.01.T01:intron | 45.0% |
| GCAGCAACTGGAAGATTGAC+AGG | + | Chr7:92869859-92869878 | None:intergenic | 50.0% | |
| GTGACACCAAAACTGCTCGA+GGG | - | Chr7:92869043-92869062 | MsG0780041598.01.T01:intron | 50.0% | |
| !! | GGCCTTGGTTTTTGCATAGC+TGG | + | Chr7:92869766-92869785 | None:intergenic | 50.0% |
| !! | TGTTGGTGCTAGAGGACCAT+TGG | + | Chr7:92869836-92869855 | None:intergenic | 50.0% |
| !! | TTGACAGGTGTTGGTGCTAG+AGG | + | Chr7:92869844-92869863 | None:intergenic | 50.0% |
| AGTACAGGCTGGTGAATGGG+AGG | - | Chr7:92868405-92868424 | MsG0780041598.01.T01:CDS | 55.0% | |
| CTTCTCTTGGAGGGAGCTCA+TGG | - | Chr7:92869902-92869921 | MsG0780041598.01.T01:CDS | 55.0% | |
| GGCTTTGCAACAGCAGCAAC+TGG | + | Chr7:92869871-92869890 | None:intergenic | 55.0% | |
| GGTGACACCAAAACTGCTCG+AGG | - | Chr7:92869042-92869061 | MsG0780041598.01.T01:intron | 55.0% | |
| GGTGCTAGAGGACCATTGGA+AGG | + | Chr7:92869832-92869851 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 92868337 | 92869993 | 92868337 | ID=MsG0780041598.01;Name=MsG0780041598.01 |
| Chr7 | mRNA | 92868337 | 92869993 | 92868337 | ID=MsG0780041598.01.T01;Parent=MsG0780041598.01;Name=MsG0780041598.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|4|0|256 |
| Chr7 | exon | 92869797 | 92869993 | 92869797 | ID=MsG0780041598.01.T01:exon:40741;Parent=MsG0780041598.01.T01 |
| Chr7 | exon | 92869574 | 92869687 | 92869574 | ID=MsG0780041598.01.T01:exon:40740;Parent=MsG0780041598.01.T01 |
| Chr7 | exon | 92869155 | 92869313 | 92869155 | ID=MsG0780041598.01.T01:exon:40739;Parent=MsG0780041598.01.T01 |
| Chr7 | exon | 92868337 | 92868637 | 92868337 | ID=MsG0780041598.01.T01:exon:40738;Parent=MsG0780041598.01.T01 |
| Chr7 | CDS | 92869797 | 92869993 | 92869797 | ID=MsG0780041598.01.T01:cds;Parent=MsG0780041598.01.T01 |
| Chr7 | CDS | 92869574 | 92869687 | 92869574 | ID=MsG0780041598.01.T01:cds;Parent=MsG0780041598.01.T01 |
| Chr7 | CDS | 92869155 | 92869313 | 92869155 | ID=MsG0780041598.01.T01:cds;Parent=MsG0780041598.01.T01 |
| Chr7 | CDS | 92868337 | 92868637 | 92868337 | ID=MsG0780041598.01.T01:cds;Parent=MsG0780041598.01.T01 |
| Gene Sequence |
| Protein sequence |
