AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014606.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014606.01.T02 MTR_2g034610 81.091 275 15 2 1 263 1 250 1.68e-146 410
MsG0380014606.01.T01 MTR_2g034610 81.091 275 15 2 1 263 1 250 1.68e-146 410
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014606.01.T02 AT5G14240 58.759 274 73 4 1 259 1 249 1.35e-102 299
MsG0380014606.01.T01 AT5G14240 58.759 274 73 4 1 259 1 249 1.35e-102 299

Find 16 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATACACAAGATTTCTTT+TGG 0.233245 3:-57140780 None:intergenic
TGAAATTAATTTACAATCTA+TGG 0.242814 3:-57140882 None:intergenic
AATCTTGTGTATTGGTATAA+AGG 0.297989 3:+57140788 MsG0380014606.01.T01:three_prime_UTR
GTAGTAGTCACTTCTAACTT+AGG 0.383370 3:+57140826 MsG0380014606.01.T01:intron
TCAAGACAAGCCGTCATTGA+TGG 0.436184 3:+57140557 MsG0380014606.01.T01:CDS
ACAATCTATGGTCTAGCAAA+TGG 0.436319 3:-57140870 None:intergenic
TTGATTCCTCGTCTCTGCTC+TGG 0.446620 3:-57140538 None:intergenic
CCAAAAGAAATCTTGTGTAT+TGG 0.460868 3:+57140780 MsG0380014606.01.T01:three_prime_UTR
TAGTAGTCACTTCTAACTTA+GGG 0.471900 3:+57140827 MsG0380014606.01.T01:intron
TGTAACATCAGGTGTTGCAT+TGG 0.483525 3:+57140481 MsG0380014606.01.T01:intron
CTCTGGCCATCATTAAGTAC+AGG 0.512172 3:-57140521 None:intergenic
TCAGATCCTGTACTTAATGA+TGG 0.527646 3:+57140515 MsG0380014606.01.T01:CDS
CATTAAGTACAGGATCTGAT+TGG 0.532522 3:-57140511 None:intergenic
CTTGCGAACTCCATCAATGA+CGG 0.628030 3:-57140567 None:intergenic
TCATTGATGGAGTTCGCAAG+AGG 0.640944 3:+57140570 MsG0380014606.01.T01:CDS
TGATGGCCAGAGCAGAGACG+AGG 0.668974 3:+57140532 MsG0380014606.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTGAAAGA+AGG + Chr3:57139590-57139609 MsG0380014606.01.T01:intron 10.0%
!! AATATACTCAGTATAAATTT+AGG - Chr3:57140149-57140168 None:intergenic 15.0%
!! CTATAAATCTTAAATAATAC+TGG - Chr3:57139290-57139309 None:intergenic 15.0%
!! TGAAATTAATTTACAATCTA+TGG - Chr3:57140885-57140904 None:intergenic 15.0%
!!! AAAAATGAATTATGATTTTG+AGG - Chr3:57140103-57140122 None:intergenic 15.0%
!!! ATTTTATTTGATTTGATACA+AGG + Chr3:57139005-57139024 MsG0380014606.01.T01:intron 15.0%
!!! TTTATTGTTTTCTTTCTTTT+TGG + Chr3:57140667-57140686 MsG0380014606.01.T01:three_prime_UTR 15.0%
!!! TTTTTTAGTGTTGTAAATTA+AGG + Chr3:57140932-57140951 MsG0380014606.01.T01:three_prime_UTR 15.0%
!! AACTATACAAGAACTTAAAA+AGG - Chr3:57140382-57140401 None:intergenic 20.0%
!!! AAGTTGTGATTTTTTTTATG+TGG + Chr3:57138884-57138903 MsG0380014606.01.T01:intron 20.0%
!!! AATCAAAATCTACTTTGTTT+AGG + Chr3:57138981-57139000 MsG0380014606.01.T01:intron 20.0%
!!! AGTTGTGATTTTTTTTATGT+GGG + Chr3:57138885-57138904 MsG0380014606.01.T01:intron 20.0%
!!! ATTTCCTTTTTTTTTTCATG+TGG + Chr3:57138821-57138840 MsG0380014606.01.T01:intron 20.0%
!!! TTTCCTTTTTTTTTTCATGT+GGG + Chr3:57138822-57138841 MsG0380014606.01.T01:intron 20.0%
!!! TTTTTTTTTTGAAAGAAGGA+CGG + Chr3:57139594-57139613 MsG0380014606.01.T01:intron 20.0%
! AAAATGTTGTGTTAGATGTA+TGG + Chr3:57139073-57139092 MsG0380014606.01.T01:intron 25.0%
! AACACTTATAGTAGAAATGA+TGG + Chr3:57139154-57139173 MsG0380014606.01.T01:intron 25.0%
! ACAAAACAAGCAAAGAATTA+AGG - Chr3:57140464-57140483 None:intergenic 25.0%
! AGATTATCACTTCATATACA+AGG + Chr3:57138559-57138578 MsG0380014606.01.T01:CDS 25.0%
! ATCAAAGAAAACATGAACAA+TGG - Chr3:57139943-57139962 None:intergenic 25.0%
! ATTGATCCATGATTTATCTT+TGG - Chr3:57138705-57138724 None:intergenic 25.0%
! CAAAACAAGCAAAGAATTAA+GGG - Chr3:57140463-57140482 None:intergenic 25.0%
! GAAATTATGTTGGTATGAAT+AGG + Chr3:57139861-57139880 MsG0380014606.01.T01:intron 25.0%
! GTATTTAAAAATGCAATCAG+TGG - Chr3:57139789-57139808 None:intergenic 25.0%
! TAATGAGTTTGATCGAAATA+TGG + Chr3:57139312-57139331 MsG0380014606.01.T01:intron 25.0%
! TACAAGAATTAAATACCTTC+AGG - Chr3:57139905-57139924 None:intergenic 25.0%
! TGTAAAACTTAGGAAATACT+AGG - Chr3:57140222-57140241 None:intergenic 25.0%
! TTGATCCATGATTTATCTTT+GGG - Chr3:57138704-57138723 None:intergenic 25.0%
!! AATACACAAGATTTCTTTTG+GGG - Chr3:57140781-57140800 None:intergenic 25.0%
!! AATCTTGTGTATTGGTATAA+AGG + Chr3:57140788-57140807 MsG0380014606.01.T01:three_prime_UTR 25.0%
!! AATGTGTTACTGTAAAACTT+AGG - Chr3:57140232-57140251 None:intergenic 25.0%
!! AGTAGTATCATTGATTGAAA+AGG + Chr3:57140044-57140063 MsG0380014606.01.T01:intron 25.0%
!! CAATACACAAGATTTCTTTT+GGG - Chr3:57140782-57140801 None:intergenic 25.0%
!! TGATTGCATTTTTAAATACC+CGG + Chr3:57139790-57139809 MsG0380014606.01.T01:CDS 25.0%
!!! ATTTGGTAATGTAGTGTTTT+AGG + Chr3:57138955-57138974 MsG0380014606.01.T01:intron 25.0%
!!! TCATTTTTGCAATTACATGA+TGG + Chr3:57140115-57140134 MsG0380014606.01.T01:intron 25.0%
!!! TGAAGGTATTTAATTCTTGT+AGG + Chr3:57139904-57139923 MsG0380014606.01.T01:intron 25.0%
!!! TTTGGTAATGTAGTGTTTTA+GGG + Chr3:57138956-57138975 MsG0380014606.01.T01:intron 25.0%
!!! TTTTTTTTTGAAAGAAGGAC+GGG + Chr3:57139595-57139614 MsG0380014606.01.T01:intron 25.0%
AAAGTAGGAAGATTACAATC+CGG - Chr3:57139812-57139831 None:intergenic 30.0%
ACTTATAGTAGAAATGATGG+TGG + Chr3:57139157-57139176 MsG0380014606.01.T01:intron 30.0%
AGAATGAGATTAGACGATAT+AGG + Chr3:57139098-57139117 MsG0380014606.01.T01:intron 30.0%
ATCGAAATATGGTTTCTGAT+AGG + Chr3:57139323-57139342 MsG0380014606.01.T01:intron 30.0%
ATGACAACATTAGATAGAGT+TGG + Chr3:57139128-57139147 MsG0380014606.01.T01:intron 30.0%
ATGTTGGTATGAATAGGTTT+GGG + Chr3:57139867-57139886 MsG0380014606.01.T01:intron 30.0%
CAACCCACATGAAAAAAAAA+AGG - Chr3:57138828-57138847 None:intergenic 30.0%
CCAAAAGAAATCTTGTGTAT+TGG + Chr3:57140780-57140799 MsG0380014606.01.T01:three_prime_UTR 30.0%
GCTGTTAAAGGAAATTATGT+TGG + Chr3:57139851-57139870 MsG0380014606.01.T01:CDS 30.0%
GCTTAAAGAACATTAACAAC+AGG - Chr3:57139971-57139990 None:intergenic 30.0%
GTTGTTTATAGAATTCTCTC+TGG + Chr3:57140179-57140198 MsG0380014606.01.T01:intron 30.0%
TAAAAAGGTAAAGATGTGCA+AGG - Chr3:57140367-57140386 None:intergenic 30.0%
TAGTAGTCACTTCTAACTTA+GGG + Chr3:57140827-57140846 MsG0380014606.01.T01:intron 30.0%
TATGTTGGTATGAATAGGTT+TGG + Chr3:57139866-57139885 MsG0380014606.01.T01:intron 30.0%
TGACAACATTAGATAGAGTT+GGG + Chr3:57139129-57139148 MsG0380014606.01.T01:intron 30.0%
TTCATATACAAGGATCTAGA+AGG + Chr3:57138569-57138588 MsG0380014606.01.T01:CDS 30.0%
TTGTAATCTTCCTACTTTGT+TGG + Chr3:57139814-57139833 MsG0380014606.01.T01:CDS 30.0%
! ATACAGGTACTCTACATTTT+CGG + Chr3:57138790-57138809 MsG0380014606.01.T01:CDS 30.0%
! ATCTTCACAAATTTTGTTGC+AGG - Chr3:57139761-57139780 None:intergenic 30.0%
! CCAATACACAAGATTTCTTT+TGG - Chr3:57140783-57140802 None:intergenic 30.0%
! GCAATTACATGATGGAATTA+GGG + Chr3:57140123-57140142 MsG0380014606.01.T01:intron 30.0%
! GTTTCTCTTATAGTTTTTCC+AGG - Chr3:57139268-57139287 None:intergenic 30.0%
! TGCAATTACATGATGGAATT+AGG + Chr3:57140122-57140141 MsG0380014606.01.T01:intron 30.0%
! TTTGCTATGATAGAAAGAAG+AGG + Chr3:57139428-57139447 MsG0380014606.01.T01:CDS 30.0%
!!! ATGTGGGTTGTTTTTCTTTA+TGG + Chr3:57138838-57138857 MsG0380014606.01.T01:intron 30.0%
!!! TTTGCTTGTTTTGTAACATC+AGG + Chr3:57140470-57140489 MsG0380014606.01.T01:intron 30.0%
AAGTAGGAAGATTACAATCC+GGG - Chr3:57139811-57139830 None:intergenic 35.0%
AATGCAATGCGTTGAAGAAT+TGG + Chr3:57139724-57139743 MsG0380014606.01.T01:CDS 35.0%
ACAATCTATGGTCTAGCAAA+TGG - Chr3:57140873-57140892 None:intergenic 35.0%
ACGAAATCAGATCCTGAAAT+GGG - Chr3:57139505-57139524 None:intergenic 35.0%
ACTTTGTTGGTGTACAACAA+CGG + Chr3:57139827-57139846 MsG0380014606.01.T01:CDS 35.0%
AGCGACACAATAAAAGTGAA+AGG - Chr3:57138912-57138931 None:intergenic 35.0%
ATGACTGTAAGTAGCAATCA+AGG - Chr3:57140336-57140355 None:intergenic 35.0%
CAAATTCAAGTGCATTAACC+TGG - Chr3:57138940-57138959 None:intergenic 35.0%
CAGGTTAATGCACTTGAATT+TGG + Chr3:57138938-57138957 MsG0380014606.01.T01:intron 35.0%
CATCATCAAGATCATCTTCA+AGG - Chr3:57138754-57138773 None:intergenic 35.0%
CATTAAGTACAGGATCTGAT+TGG - Chr3:57140514-57140533 None:intergenic 35.0%
CCATTCCCAAAGATAAATCA+TGG + Chr3:57138696-57138715 MsG0380014606.01.T01:CDS 35.0%
GACAACATTAGATAGAGTTG+GGG + Chr3:57139130-57139149 MsG0380014606.01.T01:intron 35.0%
GACGATATTCAAACCAAACT+TGG + Chr3:57138608-57138627 MsG0380014606.01.T01:CDS 35.0%
GGACAACTTCAACTAGATAA+GGG - Chr3:57140312-57140331 None:intergenic 35.0%
GTAGTAGTCACTTCTAACTT+AGG + Chr3:57140826-57140845 MsG0380014606.01.T01:intron 35.0%
GTTGTCATTCTTTACAAGGA+CGG + Chr3:57139562-57139581 MsG0380014606.01.T01:CDS 35.0%
TACGAAATCAGATCCTGAAA+TGG - Chr3:57139506-57139525 None:intergenic 35.0%
TCAATAGGATTCCTGAATGT+GGG + Chr3:57139696-57139715 MsG0380014606.01.T01:intron 35.0%
TCAGATCCTGTACTTAATGA+TGG + Chr3:57140515-57140534 MsG0380014606.01.T01:CDS 35.0%
TCTCTTGTGTTCTGTTCAAT+AGG + Chr3:57139681-57139700 MsG0380014606.01.T01:intron 35.0%
TGACTGTAAGTAGCAATCAA+GGG - Chr3:57140335-57140354 None:intergenic 35.0%
TGGTTTCTGATAGGACATTA+TGG + Chr3:57139332-57139351 MsG0380014606.01.T01:intron 35.0%
TTCAATAGGATTCCTGAATG+TGG + Chr3:57139695-57139714 MsG0380014606.01.T01:intron 35.0%
TTGTCATTCTTTACAAGGAC+GGG + Chr3:57139563-57139582 MsG0380014606.01.T01:CDS 35.0%
TTGTTGTACACCAACAAAGT+AGG - Chr3:57139827-57139846 None:intergenic 35.0%
TTTGTATGTGAGATGCTGAT+AGG - Chr3:57140283-57140302 None:intergenic 35.0%
! AAGGTCTTCAAGTTCATCAT+GGG - Chr3:57138735-57138754 None:intergenic 35.0%
! ATGTAGAGTACCTGTATTGT+TGG - Chr3:57138787-57138806 None:intergenic 35.0%
! CCATGATTTATCTTTGGGAA+TGG - Chr3:57138699-57138718 None:intergenic 35.0%
! TACAGGTACTCTACATTTTC+GGG + Chr3:57138791-57138810 MsG0380014606.01.T01:CDS 35.0%
! TATCTTTGGGAATGGAATCA+GGG - Chr3:57138691-57138710 None:intergenic 35.0%
! TTATCTTTGGGAATGGAATC+AGG - Chr3:57138692-57138711 None:intergenic 35.0%
!! TGATTTTGAGGAGCTACTAT+AGG - Chr3:57140091-57140110 None:intergenic 35.0%
!! TTCAAGTTCATCATGGGTTT+TGG - Chr3:57138729-57138748 None:intergenic 35.0%
!!! CTCTGTTATTTTGATTAGCG+TGG + Chr3:57139042-57139061 MsG0380014606.01.T01:intron 35.0%
!!! TTATTGTGTCGCTTTTATCC+AGG + Chr3:57138919-57138938 MsG0380014606.01.T01:intron 35.0%
AAGACATGTAGATGAGACGA+AGG + Chr3:57139213-57139232 MsG0380014606.01.T01:intron 40.0%
AAGGATAGTCATGTCACTAG+AGG + Chr3:57139232-57139251 MsG0380014606.01.T01:intron 40.0%
ACTGTAAGTAGCAATCAAGG+GGG - Chr3:57140333-57140352 None:intergenic 40.0%
AGAAGGTTCCACAACTCAAT+GGG + Chr3:57138586-57138605 MsG0380014606.01.T01:CDS 40.0%
GAAACTACACTTAGTGGTTC+GGG + Chr3:57139179-57139198 MsG0380014606.01.T01:intron 40.0%
GACTGTAAGTAGCAATCAAG+GGG - Chr3:57140334-57140353 None:intergenic 40.0%
GCAAAAATGCTAATCGCTTG+AGG - Chr3:57140642-57140661 None:intergenic 40.0%
GGAAACTACACTTAGTGGTT+CGG + Chr3:57139178-57139197 MsG0380014606.01.T01:intron 40.0%
GGGACAACTTCAACTAGATA+AGG - Chr3:57140313-57140332 None:intergenic 40.0%
GGTGGTTGTCATTCTTTACA+AGG + Chr3:57139558-57139577 MsG0380014606.01.T01:CDS 40.0%
TACAACAACGGAGCTGTTAA+AGG + Chr3:57139839-57139858 MsG0380014606.01.T01:CDS 40.0%
TAGAAGGTTCCACAACTCAA+TGG + Chr3:57138585-57138604 MsG0380014606.01.T01:CDS 40.0%
TGCATTAACATCCCACATTC+AGG - Chr3:57139710-57139729 None:intergenic 40.0%
! AATATCGTCCCATTGAGTTG+TGG - Chr3:57138597-57138616 None:intergenic 40.0%
! ATGGCTTAATTTGATCCACC+TGG + Chr3:57139351-57139370 MsG0380014606.01.T01:intron 40.0%
! ATGGTGGAAACTACACTTAG+TGG + Chr3:57139173-57139192 MsG0380014606.01.T01:intron 40.0%
! CAAGGTCTTCAAGTTCATCA+TGG - Chr3:57138736-57138755 None:intergenic 40.0%
! GAAGAGGTTAGCTGAGATAA+AGG + Chr3:57139444-57139463 MsG0380014606.01.T01:CDS 40.0%
! TAGAGTACCTGTATTGTTGG+AGG - Chr3:57138784-57138803 None:intergenic 40.0%
! TGTAACATCAGGTGTTGCAT+TGG + Chr3:57140481-57140500 MsG0380014606.01.T01:intron 40.0%
!!! GCAGCTAAAGTTTTGAGGTT+TGG + Chr3:57139469-57139488 MsG0380014606.01.T01:CDS 40.0%
ACAACCACCCAAACATCAGA+TGG - Chr3:57139547-57139566 None:intergenic 45.0%
ACATGAACAATGGAGCTTGC+AGG - Chr3:57139933-57139952 None:intergenic 45.0%
AGGAGGAAGATTGCCAAGTT+TGG - Chr3:57138624-57138643 None:intergenic 45.0%
AGGATCTGATTTCGTACGAG+AGG + Chr3:57139510-57139529 MsG0380014606.01.T01:CDS 45.0%
AGGTAAAGATGTGCAAGGAG+AGG - Chr3:57140362-57140381 None:intergenic 45.0%
ATCGCTTCCTCCAACAATAC+AGG + Chr3:57138774-57138793 MsG0380014606.01.T01:CDS 45.0%
CTCTGGCCATCATTAAGTAC+AGG - Chr3:57140524-57140543 None:intergenic 45.0%
CTTGCGAACTCCATCAATGA+CGG - Chr3:57140570-57140589 None:intergenic 45.0%
TCAAGACAAGCCGTCATTGA+TGG + Chr3:57140557-57140576 MsG0380014606.01.T01:CDS 45.0%
TCATTGATGGAGTTCGCAAG+AGG + Chr3:57140570-57140589 MsG0380014606.01.T01:CDS 45.0%
! AAAGGTGGTGGTTTGAAAGC+GGG - Chr3:57138653-57138672 None:intergenic 45.0%
! AGGAGGCAGCTAAAGTTTTG+AGG + Chr3:57139464-57139483 MsG0380014606.01.T01:CDS 45.0%
! AGTCATGTCACTAGAGGCAT+AGG + Chr3:57139238-57139257 MsG0380014606.01.T01:intron 45.0%
! GAAAGGTGGTGGTTTGAAAG+CGG - Chr3:57138654-57138673 None:intergenic 45.0%
! GAGGTTAGCTGAGATAAAGG+AGG + Chr3:57139447-57139466 MsG0380014606.01.T01:CDS 45.0%
ATGGAATCAGGGTCAATGGC+AGG - Chr3:57138680-57138699 None:intergenic 50.0%
GCAGGCTCCATCTGATGTTT+GGG + Chr3:57139537-57139556 MsG0380014606.01.T01:CDS 50.0%
GGATCAGTGACTCCCATTTC+AGG + Chr3:57139490-57139509 MsG0380014606.01.T01:CDS 50.0%
GGGAATGGAATCAGGGTCAA+TGG - Chr3:57138684-57138703 None:intergenic 50.0%
GGTTTGAAAGCGGGTGGTTT+AGG - Chr3:57138644-57138663 None:intergenic 50.0%
TGGAATCAGGGTCAATGGCA+GGG - Chr3:57138679-57138698 None:intergenic 50.0%
TTGAAAGCGGGTGGTTTAGG+AGG - Chr3:57138641-57138660 None:intergenic 50.0%
TTGATTCCTCGTCTCTGCTC+TGG - Chr3:57140541-57140560 None:intergenic 50.0%
TTTCGTACGAGAGGTTTCGC+AGG + Chr3:57139519-57139538 MsG0380014606.01.T01:CDS 50.0%
! ACTAGAGGCATAGGAAGACC+TGG + Chr3:57139247-57139266 MsG0380014606.01.T01:intron 50.0%
CGCAGGCTCCATCTGATGTT+TGG + Chr3:57139536-57139555 MsG0380014606.01.T01:CDS 55.0%
GGAATCAGGGTCAATGGCAG+GGG - Chr3:57138678-57138697 None:intergenic 55.0%
GGCTCCATCTGATGTTTGGG+TGG + Chr3:57139540-57139559 MsG0380014606.01.T01:CDS 55.0%
GGGCGAAGATGTACTCCTGA+AGG + Chr3:57139887-57139906 MsG0380014606.01.T01:intron 55.0%
TCAATGGCAGGGGAGAAAGG+TGG - Chr3:57138668-57138687 None:intergenic 55.0%
! TTGATCCACCTGGTGTCAGC+AGG + Chr3:57139361-57139380 MsG0380014606.01.T01:intron 55.0%
ATGGCAGGGGAGAAAGGTGG+TGG - Chr3:57138665-57138684 None:intergenic 60.0%
CAACACCACCTGCTGACACC+AGG - Chr3:57139372-57139391 None:intergenic 60.0%
GGGTCAATGGCAGGGGAGAA+AGG - Chr3:57138671-57138690 None:intergenic 60.0%
TGATGGCCAGAGCAGAGACG+AGG + Chr3:57140532-57140551 MsG0380014606.01.T01:CDS 60.0%
! ATCCACCTGGTGTCAGCAGG+TGG + Chr3:57139364-57139383 MsG0380014606.01.T01:intron 60.0%
! GGTGGTGGTTTGAAAGCGGG+TGG - Chr3:57138650-57138669 None:intergenic 60.0%
CACCACCTGCTGACACCAGG+TGG - Chr3:57139369-57139388 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 57138554 57140975 57138554 ID=MsG0380014606.01;Name=MsG0380014606.01
Chr3 mRNA 57138554 57140959 57138554 ID=MsG0380014606.01.T01;Parent=MsG0380014606.01;Name=MsG0380014606.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0.5|0.4|1|0.5|0.4|5|272|263
Chr3 exon 57140492 57140812 57140492 ID=MsG0380014606.01.T01:exon:16177;Parent=MsG0380014606.01.T01
Chr3 exon 57140848 57140959 57140848 ID=MsG0380014606.01.T01:exon:16178;Parent=MsG0380014606.01.T01
Chr3 CDS 57138554 57138812 57138554 ID=MsG0380014606.01.T01:cds;Parent=MsG0380014606.01.T01
Chr3 CDS 57139383 57139584 57139383 ID=MsG0380014606.01.T01:cds;Parent=MsG0380014606.01.T01
Chr3 CDS 57139703 57139872 57139703 ID=MsG0380014606.01.T01:cds;Parent=MsG0380014606.01.T01
Chr3 CDS 57140492 57140652 57140492 ID=MsG0380014606.01.T01:cds;Parent=MsG0380014606.01.T01
Chr3 three_prime_UTR 57140653 57140812 57140653 ID=MsG0380014606.01.T01:three_prime_utr;Parent=MsG0380014606.01.T01
Chr3 three_prime_UTR 57140848 57140959 57140848 ID=MsG0380014606.01.T01:three_prime_utr;Parent=MsG0380014606.01.T01
Chr3 mRNA 57138554 57140975 57138554 ID=MsG0380014606.01.T02;Parent=MsG0380014606.01;Name=MsG0380014606.01.T02;_AED=0.49;_eAED=0.50;_QI=0|0.33|0.25|1|0.66|0.75|4|323|263
Chr3 exon 57140492 57140975 57140492 ID=MsG0380014606.01.T02:exon:16179;Parent=MsG0380014606.01.T02
Chr3 CDS 57138554 57138812 57138554 ID=MsG0380014606.01.T02:cds;Parent=MsG0380014606.01.T02
Chr3 CDS 57139383 57139584 57139383 ID=MsG0380014606.01.T02:cds;Parent=MsG0380014606.01.T02
Chr3 CDS 57139703 57139872 57139703 ID=MsG0380014606.01.T02:cds;Parent=MsG0380014606.01.T02
Chr3 CDS 57140492 57140652 57140492 ID=MsG0380014606.01.T02:cds;Parent=MsG0380014606.01.T02
Chr3 three_prime_UTR 57140653 57140975 57140653 ID=MsG0380014606.01.T02:three_prime_utr;Parent=MsG0380014606.01.T02
Gene Sequence

>MsG0380014606.01.T02

ATGGGAGATTATCACTTCATATACAAGGATCTAGAAGGTTCCACAACTCAATGGGACGATATTCAAACCAAACTTGGCAATCTTCCTCCTAAACCACCCGCTTTCAAACCACCACCTTTCTCCCCTGCCATTGACCCTGATTCCATTCCCAAAGATAAATCATGGATCAATTCCAAAACCCATGATGAACTTGAAGACCTTGAAGATGATCTTGATGATGATCGCTTCCTCCAACAATACAGGTACTCTACATTTTCGGGTGGTGTTGTTGTTTTTTCAGTAACATGTTCTAAGTTGAGTCATTTTTGCTATGATAGAAAGAAGAGGTTAGCTGAGATAAAGGAGGCAGCTAAAGTTTTGAGGTTTGGATCAGTGACTCCCATTTCAGGATCTGATTTCGTACGAGAGGTTTCGCAGGCTCCATCTGATGTTTGGGTGGTTGTCATTCTTTACAAGGACGGGATTCCTGAATGTGGGATGTTAATGCAATGCGTTGAAGAATTGGCTACAATGTATCCTGCAACAAAATTTGTGAAGATAATATCCACTGATTGCATTTTTAAATACCCGGATTGTAATCTTCCTACTTTGTTGGTGTACAACAACGGAGCTGTTAAAGGAAATTATGTTGGTGTTGCATTGGTCTTGTGCCAATCAGATCCTGTACTTAATGATGGCCAGAGCAGAGACGAGGAATCAAGACAAGCCGTCATTGATGGAGTTCGCAAGAGGTTCATAGAGAAAGTTGTTGCTGATCATGAAGAGCGTGATGACGACTCCTCAAGCGATTAG

>MsG0380014606.01.T01

ATGGGAGATTATCACTTCATATACAAGGATCTAGAAGGTTCCACAACTCAATGGGACGATATTCAAACCAAACTTGGCAATCTTCCTCCTAAACCACCCGCTTTCAAACCACCACCTTTCTCCCCTGCCATTGACCCTGATTCCATTCCCAAAGATAAATCATGGATCAATTCCAAAACCCATGATGAACTTGAAGACCTTGAAGATGATCTTGATGATGATCGCTTCCTCCAACAATACAGGTACTCTACATTTTCGGGTGGTGTTGTTGTTTTTTCAGTAACATGTTCTAAGTTGAGTCATTTTTGCTATGATAGAAAGAAGAGGTTAGCTGAGATAAAGGAGGCAGCTAAAGTTTTGAGGTTTGGATCAGTGACTCCCATTTCAGGATCTGATTTCGTACGAGAGGTTTCGCAGGCTCCATCTGATGTTTGGGTGGTTGTCATTCTTTACAAGGACGGGATTCCTGAATGTGGGATGTTAATGCAATGCGTTGAAGAATTGGCTACAATGTATCCTGCAACAAAATTTGTGAAGATAATATCCACTGATTGCATTTTTAAATACCCGGATTGTAATCTTCCTACTTTGTTGGTGTACAACAACGGAGCTGTTAAAGGAAATTATGTTGGTGTTGCATTGGTCTTGTGCCAATCAGATCCTGTACTTAATGATGGCCAGAGCAGAGACGAGGAATCAAGACAAGCCGTCATTGATGGAGTTCGCAAGAGGTTCATAGAGAAAGTTGTTGCTGATCATGAAGAGCGTGATGACGACTCCTCAAGCGATTAG
Protein sequence

>MsG0380014606.01.T02

MGDYHFIYKDLEGSTTQWDDIQTKLGNLPPKPPAFKPPPFSPAIDPDSIPKDKSWINSKTHDELEDLEDDLDDDRFLQQYRYSTFSGGVVVFSVTCSKLSHFCYDRKKRLAEIKEAAKVLRFGSVTPISGSDFVREVSQAPSDVWVVVILYKDGIPECGMLMQCVEELATMYPATKFVKIISTDCIFKYPDCNLPTLLVYNNGAVKGNYVGVALVLCQSDPVLNDGQSRDEESRQAVIDGVRKRFIEKVVADHEERDDDSSSD*

>MsG0380014606.01.T01

MGDYHFIYKDLEGSTTQWDDIQTKLGNLPPKPPAFKPPPFSPAIDPDSIPKDKSWINSKTHDELEDLEDDLDDDRFLQQYRYSTFSGGVVVFSVTCSKLSHFCYDRKKRLAEIKEAAKVLRFGSVTPISGSDFVREVSQAPSDVWVVVILYKDGIPECGMLMQCVEELATMYPATKFVKIISTDCIFKYPDCNLPTLLVYNNGAVKGNYVGVALVLCQSDPVLNDGQSRDEESRQAVIDGVRKRFIEKVVADHEERDDDSSSD*