AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014872.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014872.01.T01 MTR_3g465510 91.972 436 13 2 1 419 1 431 0.0 797
MsG0380014872.01.T01 MTR_3g465440 81.903 431 59 3 1 412 1 431 0.0 695
MsG0380014872.01.T01 MTR_7g010750 52.681 429 191 3 3 419 2 430 1.13e-155 447
MsG0380014872.01.T01 MTR_7g010790 53.207 421 184 2 12 419 11 431 3.69e-154 443
MsG0380014872.01.T01 MTR_3g033730 53.037 428 188 3 5 419 4 431 1.06e-147 426
MsG0380014872.01.T01 MTR_8g467180 44.499 409 219 3 17 419 1 407 7.71e-123 362
MsG0380014872.01.T01 MTR_8g467190 43.382 408 224 3 17 419 1 406 2.42e-118 351
MsG0380014872.01.T01 MTR_8g465310 41.067 375 219 1 45 419 34 406 1.99e-103 313
MsG0380014872.01.T01 MTR_1g094620 41.689 379 217 3 42 419 164 539 8.73e-102 313
MsG0380014872.01.T01 MTR_1g094620 40.933 386 217 4 42 419 164 546 6.09e-99 306
MsG0380014872.01.T01 MTR_8g467070 42.687 335 178 3 17 342 1 330 1.05e-83 262
MsG0380014872.01.T01 MTR_7g062410 41.840 337 194 2 45 379 51 387 1.64e-81 257
MsG0380014872.01.T01 MTR_7g089910 35.372 376 222 3 42 417 154 508 2.21e-80 256
MsG0380014872.01.T01 MTR_7g062430 34.491 403 237 2 4 379 102 504 8.87e-79 253
MsG0380014872.01.T01 MTR_4g037690 38.245 319 183 4 42 352 146 458 2.39e-74 240
MsG0380014872.01.T01 MTR_1g050328 41.667 264 153 1 45 307 168 431 8.56e-67 219
MsG0380014872.01.T01 MTR_7g089920 36.330 267 170 0 42 308 154 420 4.85e-62 206
MsG0380014872.01.T01 MTR_3g084960 32.258 403 260 7 26 419 72 470 2.03e-54 187
MsG0380014872.01.T01 MTR_2g067090 48.000 100 52 0 113 212 1 100 1.75e-23 100
MsG0380014872.01.T01 MTR_4g133495 48.936 94 48 0 113 206 1 94 1.74e-22 96.7
MsG0380014872.01.T01 MTR_4g133340 48.936 94 48 0 113 206 1 94 1.74e-22 96.7
MsG0380014872.01.T01 MTR_7g107090 23.310 429 278 12 13 415 4 407 4.06e-22 97.8
MsG0380014872.01.T01 MTR_8g080120 24.694 409 275 12 34 416 25 426 1.90e-19 90.5
MsG0380014872.01.T01 MTR_6g022790 23.908 435 291 16 13 416 20 445 2.61e-16 80.9
MsG0380014872.01.T01 MTR_1g093030 24.312 436 283 14 15 416 5 427 1.83e-15 78.2
MsG0380014872.01.T01 MTR_1g093020 22.811 434 288 13 18 418 10 429 2.99e-14 74.7
MsG0380014872.01.T01 MTR_6g022780 24.306 432 281 16 17 416 1 418 8.02e-14 73.2
MsG0380014872.01.T01 MTR_8g073340 24.598 435 260 17 12 415 11 408 1.15e-13 72.8
MsG0380014872.01.T01 MTR_2g096830 23.832 428 284 13 20 416 2 418 1.35e-13 72.4
MsG0380014872.01.T01 MTR_6g023075 24.769 432 279 16 17 416 1 418 2.70e-13 71.6
MsG0380014872.01.T01 MTR_1g050325 30.435 115 79 1 305 419 13 126 2.78e-13 67.0
MsG0380014872.01.T01 MTR_5g024300 25.185 405 242 16 44 417 45 419 4.01e-13 70.9
MsG0380014872.01.T01 MTR_4g103890 22.613 398 272 13 44 416 27 413 5.60e-13 70.5
MsG0380014872.01.T01 MTR_1g093020 22.195 410 272 13 18 394 10 405 1.12e-11 66.6
MsG0380014872.01.T01 MTR_2g101920 23.185 427 286 15 1 394 12 429 2.27e-11 65.9
MsG0380014872.01.T01 MTR_7g089905 27.928 111 79 1 308 418 1 110 6.02e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014872.01.T01 AT3G28960 52.868 401 186 2 18 416 3 402 5.66e-146 421
MsG0380014872.01.T01 AT3G28960 52.868 401 186 2 18 416 3 402 5.66e-146 421
MsG0380014872.01.T01 AT3G28960 52.868 401 186 2 18 416 3 402 5.66e-146 421
MsG0380014872.01.T01 AT3G28960 52.868 401 186 2 18 416 3 402 5.66e-146 421
MsG0380014872.01.T01 AT5G15240 50.000 418 204 3 3 415 2 419 1.58e-142 413
MsG0380014872.01.T01 AT3G28960 55.255 333 149 0 84 416 1 333 6.47e-132 383
MsG0380014872.01.T01 AT5G15240 52.252 333 158 1 84 415 1 333 1.38e-119 352
MsG0380014872.01.T01 AT2G41190 39.523 377 227 1 42 418 159 534 3.44e-102 314
MsG0380014872.01.T01 AT2G39130 39.467 375 226 1 45 419 175 548 8.23e-98 303
MsG0380014872.01.T01 AT2G39130 39.467 375 226 1 45 419 175 548 8.23e-98 303
MsG0380014872.01.T01 AT5G02180 40.054 372 221 2 42 412 171 541 4.66e-96 298
MsG0380014872.01.T01 AT5G02180 40.054 372 221 2 42 412 171 541 4.66e-96 298
MsG0380014872.01.T01 AT5G02170 38.235 340 208 1 42 379 147 486 1.89e-90 283
MsG0380014872.01.T01 AT3G54830 41.463 328 185 1 45 365 165 492 5.53e-90 283
MsG0380014872.01.T01 AT3G54830 41.463 328 185 1 45 365 165 492 5.53e-90 283
MsG0380014872.01.T01 AT3G09340 37.105 380 235 3 42 419 146 523 7.68e-90 282
MsG0380014872.01.T01 AT3G09330 36.842 380 236 3 42 419 146 523 5.58e-89 279
MsG0380014872.01.T01 AT2G39130 40.705 312 185 0 45 356 175 486 1.08e-85 270
MsG0380014872.01.T01 AT2G41190 40.064 312 187 0 42 353 159 470 7.54e-85 268
MsG0380014872.01.T01 AT5G02170 36.202 337 184 2 45 379 150 457 5.11e-78 249
MsG0380014872.01.T01 AT5G16740 32.368 380 247 4 44 419 47 420 5.78e-58 196
MsG0380014872.01.T01 AT5G15240 51.462 171 83 0 245 415 139 309 4.24e-52 177
MsG0380014872.01.T01 AT5G15240 51.049 143 66 2 3 141 2 144 1.18e-38 142
MsG0380014872.01.T01 AT2G42005 24.703 421 227 15 44 418 37 413 3.59e-20 92.4
MsG0380014872.01.T01 AT3G11900 25.622 402 255 13 44 415 45 432 3.27e-16 80.5
MsG0380014872.01.T01 AT3G11900 25.622 402 255 13 44 415 45 432 3.27e-16 80.5
MsG0380014872.01.T01 AT3G01760 21.868 439 297 15 16 419 13 440 6.84e-13 70.5
MsG0380014872.01.T01 AT1G61270 22.500 440 291 17 16 419 16 441 8.02e-13 70.5
MsG0380014872.01.T01 AT4G38250 29.189 185 123 4 231 415 255 431 8.70e-13 70.1
MsG0380014872.01.T01 AT5G40780 22.759 435 287 18 18 413 12 436 2.08e-11 65.9
MsG0380014872.01.T01 AT1G24400 23.500 400 270 13 44 418 45 433 3.77e-11 65.1
MsG0380014872.01.T01 AT5G40780 22.418 397 271 14 44 413 2 388 4.70e-11 64.7
MsG0380014872.01.T01 AT5G40780 22.418 397 271 14 44 413 2 388 4.70e-11 64.7

Find 86 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGTTACTTGAAGATTTC+AGG 0.207447 3:-61795990 MsG0380014872.01.T01:CDS
TCAGAATTTGTAAGTTTCTT+TGG 0.209466 3:-61795862 MsG0380014872.01.T01:exon
GTGTAATGGGAACTTTAATT+TGG 0.236519 3:-61795808 MsG0380014872.01.T01:three_prime_UTR
TTGCAAATTACTTTATTTCT+TGG 0.261053 3:-61795784 MsG0380014872.01.T01:three_prime_UTR
AATTATTCAATAATTGTAAT+GGG 0.293976 3:-61795933 MsG0380014872.01.T01:CDS
TTGTAGAGAGTAGGAAGAAT+TGG 0.296425 3:+61796943 None:intergenic
CTTCATTGAAGTACCACTTT+TGG 0.313880 3:-61800141 MsG0380014872.01.T01:CDS
ATTCTAGGGTACTTAATGTT+TGG 0.324866 3:-61796317 MsG0380014872.01.T01:CDS
GCTGTGACCATTCCCTTGTT+TGG 0.331079 3:-61796074 MsG0380014872.01.T01:CDS
GGATATCTTATGTCACTTGT+TGG 0.334465 3:-61796053 MsG0380014872.01.T01:CDS
TCAGGATCATACAAGAGATA+TGG 0.338350 3:-61795972 MsG0380014872.01.T01:CDS
ATTAGTACATCTTTATTAGT+AGG 0.345425 3:-61796110 MsG0380014872.01.T01:CDS
TATGCAGCAGCAGCAATTCT+AGG 0.350192 3:-61796332 MsG0380014872.01.T01:CDS
TGGACCCAAAGGGAGATTAA+TGG 0.351913 3:-61797328 MsG0380014872.01.T01:CDS
CAGGAAAGGTTCTGATATTA+AGG 0.358857 3:+61797370 None:intergenic
CATGCAATTATTACAACAAA+AGG 0.371747 3:-61796148 MsG0380014872.01.T01:CDS
GATACCATTAATCTCCCTTT+GGG 0.372516 3:+61797324 None:intergenic
GAACTCTATCTTGCTGTTAC+CGG 0.374940 3:-61797285 MsG0380014872.01.T01:CDS
TAATTATTCAATAATTGTAA+TGG 0.375322 3:-61795934 MsG0380014872.01.T01:CDS
ATTGATGGAACAGGGTTTCA+TGG 0.377251 3:-61797039 MsG0380014872.01.T01:CDS
TTGAACTCAACTTTCCTGTT+TGG 0.380826 3:+61796261 None:intergenic
CATTACACCATTCTCTCTAT+AGG 0.381953 3:+61795823 None:intergenic
AACTCAACTTTCCTGTTTGG+AGG 0.384347 3:+61796264 None:intergenic
TGATACCATTAATCTCCCTT+TGG 0.389795 3:+61797323 None:intergenic
TTGTGGAATGGTGCAATTGA+TGG 0.399316 3:-61797054 MsG0380014872.01.T01:CDS
ATACCTTATGCACTAGCATC+TGG 0.414036 3:-61797480 MsG0380014872.01.T01:CDS
ACCAAGTGAATGATTCAAAT+GGG 0.415568 3:-61800103 MsG0380014872.01.T01:CDS
GACATAGGTCAACATGCATT+TGG 0.427451 3:-61797348 MsG0380014872.01.T01:CDS
TATAGAGAGAATGGTGTAAT+GGG 0.427535 3:-61795821 MsG0380014872.01.T01:three_prime_UTR
TACCAAGTGAATGATTCAAA+TGG 0.427716 3:-61800104 MsG0380014872.01.T01:CDS
CCTCCAGATGCTAGTGCATA+AGG 0.428913 3:+61797477 None:intergenic
TCCTTCTAAAATAAGAAAAC+CGG 0.435747 3:+61797266 None:intergenic
CGTTCGGTACTAGTTTGTTA+AGG 0.436402 3:+61797238 None:intergenic
CACCTAGCAGGATTAACAAT+TGG 0.437085 3:-61797207 MsG0380014872.01.T01:CDS
ATCTTCAAGTAACAAATTGA+TGG 0.442901 3:+61795996 None:intergenic
CAACAAAAGGGTCACACATA+TGG 0.446941 3:-61796135 MsG0380014872.01.T01:CDS
GCTAGGTGAATTTGCACGTT+CGG 0.452957 3:+61797222 None:intergenic
AATGGTGCAATTGATGGAAC+AGG 0.475315 3:-61797048 MsG0380014872.01.T01:CDS
CAGGATCATACAAGAGATAT+GGG 0.482137 3:-61795971 MsG0380014872.01.T01:CDS
CAAGAGATATGGGTGTGAAA+TGG 0.484133 3:-61795961 MsG0380014872.01.T01:CDS
CCCCATTTGAATCATTCACT+TGG 0.495081 3:+61800102 None:intergenic
CTATAGAGAGAATGGTGTAA+TGG 0.497514 3:-61795822 MsG0380014872.01.T01:three_prime_UTR
CAAAAGTGGTACTTCAATGA+AGG 0.498351 3:+61800142 None:intergenic
ATGCAATTATTACAACAAAA+GGG 0.498882 3:-61796147 MsG0380014872.01.T01:CDS
ATCACCTTGCTCAGCAGCCA+TGG 0.502801 3:+61800172 None:intergenic
GTAACATTAAACCTCCAAAC+AGG 0.506404 3:-61796275 MsG0380014872.01.T01:CDS
TGGATGAGCACTATAACAAA+AGG 0.515129 3:+61796963 None:intergenic
TGGAGAACAAGTTGAATCAC+AGG 0.523008 3:-61796297 MsG0380014872.01.T01:CDS
GGAACAGGGTTTCATGGTAA+AGG 0.523162 3:-61797033 MsG0380014872.01.T01:CDS
TTATTCAATAATTGTAATGG+GGG 0.524982 3:-61795931 MsG0380014872.01.T01:CDS
ATTATTCAATAATTGTAATG+GGG 0.532250 3:-61795932 MsG0380014872.01.T01:CDS
AATGCATGTTGACCTATGTC+AGG 0.538557 3:+61797351 None:intergenic
TTGTTGTCTTATGTTTCTGC+CGG 0.549030 3:-61797114 MsG0380014872.01.T01:CDS
CAGGGTTTCATGGTAAAGGA+AGG 0.550822 3:-61797029 MsG0380014872.01.T01:CDS
AACGTGCAAATTCACCTAGC+AGG 0.559395 3:-61797219 MsG0380014872.01.T01:CDS
CGATGAAGCTAAAGCACCAC+CGG 0.563358 3:+61797095 None:intergenic
ATGCAGCAGCAGCAATTCTA+GGG 0.573784 3:-61796331 MsG0380014872.01.T01:CDS
CTAGCAGGATTAACAATTGG+TGG 0.578790 3:-61797204 MsG0380014872.01.T01:CDS
TACTCCATGGCTGCTGAGCA+AGG 0.579510 3:-61800176 None:intergenic
AAGATATCCAAACAAGGGAA+TGG 0.582433 3:+61796067 None:intergenic
GCCTGTGTAACAACATGCTA+TGG 0.583300 3:+61797422 None:intergenic
TACACCATTCTCTCTATAGG+AGG 0.584303 3:+61795826 None:intergenic
TTGTCTTATGTTTCTGCCGG+TGG 0.592999 3:-61797111 MsG0380014872.01.T01:CDS
AGGGTTTCATGGTAAAGGAA+GGG 0.593801 3:-61797028 MsG0380014872.01.T01:CDS
GCAAACAAACTAACAGCAGA+AGG 0.594296 3:+61796985 None:intergenic
CAACATGCATTTGGACCCAA+AGG 0.594762 3:-61797339 MsG0380014872.01.T01:CDS
ATGCACTAGCATCTGGAGGA+TGG 0.597399 3:-61797473 MsG0380014872.01.T01:CDS
CCAAGTGAATGATTCAAATG+GGG 0.599010 3:-61800102 MsG0380014872.01.T01:CDS
GCCATAGCATGTTGTTACAC+AGG 0.601297 3:-61797423 MsG0380014872.01.T01:CDS
CAATACCACATGGTTCATGT+TGG 0.622019 3:-61800059 MsG0380014872.01.T01:intron
ATCAGAACCTTTCCTGACAT+AGG 0.626705 3:-61797363 MsG0380014872.01.T01:CDS
AACATGCATTTGGACCCAAA+GGG 0.628001 3:-61797338 MsG0380014872.01.T01:CDS
ATGTCCTCTAACAAAACAGT+AGG 0.628376 3:+61797141 None:intergenic
AGGAAAGTTGAGTTCAAGAG+TGG 0.632537 3:-61796255 MsG0380014872.01.T01:CDS
GACATAAGATATCCAAACAA+GGG 0.638111 3:+61796062 None:intergenic
CACCAATTGTTAATCCTGCT+AGG 0.640186 3:+61797205 None:intergenic
TACTCTCTACAACTCGATGA+GGG 0.644461 3:-61796932 MsG0380014872.01.T01:CDS
TGACATAAGATATCCAAACA+AGG 0.648062 3:+61796061 None:intergenic
ATGTTGACCTATGTCAGGAA+AGG 0.648068 3:+61797356 None:intergenic
CTACTCTCTACAACTCGATG+AGG 0.655719 3:-61796933 MsG0380014872.01.T01:CDS
CCTTATGCACTAGCATCTGG+AGG 0.658489 3:-61797477 MsG0380014872.01.T01:CDS
ATGTTGTTACACAGGCACAT+TGG 0.661935 3:-61797415 MsG0380014872.01.T01:CDS
CTCATCGAGTTGTAGAGAGT+AGG 0.667969 3:+61796934 None:intergenic
AAATAAGGATCAATACCACA+TGG 0.688972 3:-61800069 MsG0380014872.01.T01:CDS
ATGGTGCAATTGATGGAACA+GGG 0.728483 3:-61797047 MsG0380014872.01.T01:CDS
CGTTACCAACATGAACCATG+TGG 0.754534 3:+61800054 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATAAAAAATAATTTTTT+AGG - Chr3:61796574-61796593 MsG0380014872.01.T01:intron 0.0%
!! AATTATTCAATAATTGTAAT+GGG - Chr3:61800002-61800021 MsG0380014872.01.T01:intron 10.0%
!! GATCAAAAAAAAATTAAAAA+AGG + Chr3:61798004-61798023 None:intergenic 10.0%
!! TAATTATTCAATAATTGTAA+TGG - Chr3:61800001-61800020 MsG0380014872.01.T01:intron 10.0%
!!! TAATTAAATTTGTTATTTGA+CGG - Chr3:61796972-61796991 MsG0380014872.01.T01:CDS 10.0%
!!! TTTGAATTTGTTATTTTATT+CGG - Chr3:61796408-61796427 MsG0380014872.01.T01:intron 10.0%
!!! TTTTATTATAAATGTGTTTA+GGG + Chr3:61796563-61796582 None:intergenic 10.0%
!!! TTTTTATTATAAATGTGTTT+AGG + Chr3:61796564-61796583 None:intergenic 10.0%
!! ATTATTCAATAATTGTAATG+GGG - Chr3:61800003-61800022 MsG0380014872.01.T01:intron 15.0%
!! TAATTTAATACTAATGTATG+TGG + Chr3:61796638-61796657 None:intergenic 15.0%
!! TTTATTATAAATGTGTTTAG+GGG + Chr3:61796562-61796581 None:intergenic 15.0%
!!! AATCTTCAACATTTTTTTAA+GGG - Chr3:61796879-61796898 MsG0380014872.01.T01:intron 15.0%
!!! AGTGTATTTTGTTAAAATTT+GGG + Chr3:61797362-61797381 None:intergenic 15.0%
!!! ATTTTAATGTCAATACATAT+GGG - Chr3:61797597-61797616 MsG0380014872.01.T01:intron 15.0%
!!! CAAAAAACTGATTTTAAAAA+GGG - Chr3:61798199-61798218 MsG0380014872.01.T01:intron 15.0%
!!! CAATTTTTTTAATCCAAAAA+TGG - Chr3:61798031-61798050 MsG0380014872.01.T01:intron 15.0%
!!! TAAAAGTTACTTATTTTATG+TGG + Chr3:61797775-61797794 None:intergenic 15.0%
!!! TAATCTTCAACATTTTTTTA+AGG - Chr3:61796878-61796897 MsG0380014872.01.T01:intron 15.0%
!!! TATTTTAATGTCAATACATA+TGG - Chr3:61797596-61797615 MsG0380014872.01.T01:intron 15.0%
!! AAGACATACATATACTTATT+AGG + Chr3:61796467-61796486 None:intergenic 20.0%
!! AATCAAGAAGAACAAATTAA+TGG + Chr3:61796028-61796047 None:intergenic 20.0%
!! ATGCAATTATTACAACAAAA+GGG - Chr3:61799788-61799807 MsG0380014872.01.T01:intron 20.0%
!! ATTAGTACATCTTTATTAGT+AGG - Chr3:61799825-61799844 MsG0380014872.01.T01:intron 20.0%
!! CTTGATAAAAGTTTATATAG+AGG - Chr3:61797085-61797104 MsG0380014872.01.T01:CDS 20.0%
!! TATTGAACAATCAATGTATT+TGG - Chr3:61796599-61796618 MsG0380014872.01.T01:intron 20.0%
!! TGATAAACATACTAAACATT+TGG - Chr3:61799521-61799540 MsG0380014872.01.T01:intron 20.0%
!! TTATTCAATAATTGTAATGG+GGG - Chr3:61800004-61800023 MsG0380014872.01.T01:intron 20.0%
!! TTTATAAATATGATTGGATG+AGG - Chr3:61796686-61796705 MsG0380014872.01.T01:intron 20.0%
!! TTTGATAAGAGTTTATATAG+AGG - Chr3:61797290-61797309 MsG0380014872.01.T01:CDS 20.0%
!!! AAAAGTGTTAGCAAATATAT+TGG - Chr3:61797027-61797046 MsG0380014872.01.T01:CDS 20.0%
!!! AAACCTTATTGTTTTTATTG+AGG - Chr3:61796433-61796452 MsG0380014872.01.T01:intron 20.0%
!!! AAAGTGTTAGCAAATATATT+GGG - Chr3:61797028-61797047 MsG0380014872.01.T01:CDS 20.0%
!!! AGTATATGTATGTCTTATTT+TGG - Chr3:61796471-61796490 MsG0380014872.01.T01:intron 20.0%
!!! ATTAATGCATATTTTGCTAT+TGG + Chr3:61799729-61799748 None:intergenic 20.0%
!!! ATTTATGTTTATTGCAGTTT+TGG - Chr3:61797944-61797963 MsG0380014872.01.T01:intron 20.0%
!!! CAGTGTATTTTGTTAAAATT+TGG + Chr3:61797363-61797382 None:intergenic 20.0%
!!! CCAAAAAACTGATTTTAAAA+AGG - Chr3:61798198-61798217 MsG0380014872.01.T01:intron 20.0%
!!! CCTTTTTAAAATCAGTTTTT+TGG + Chr3:61798201-61798220 None:intergenic 20.0%
!!! GTGTATTTTGTTAAAATTTG+GGG + Chr3:61797361-61797380 None:intergenic 20.0%
!!! TCTTTGTGTCTTTTATTTTT+TGG - Chr3:61796055-61796074 MsG0380014872.01.T01:CDS 20.0%
!!! TTGCAAATTACTTTATTTCT+TGG - Chr3:61800151-61800170 MsG0380014872.01.T01:CDS 20.0%
! AAAACAACACACTAACAAAA+TGG + Chr3:61797834-61797853 None:intergenic 25.0%
! AAACAACACACTAACAAAAT+GGG + Chr3:61797833-61797852 None:intergenic 25.0%
! AGTAGGATCTAATAGAATAA+AGG + Chr3:61797433-61797452 None:intergenic 25.0%
! AGTTATTATATATAGTCGCT+AGG + Chr3:61797639-61797658 None:intergenic 25.0%
! ATCTTCAAGTAACAAATTGA+TGG + Chr3:61799942-61799961 None:intergenic 25.0%
! CACAAAATTACACGTATTAT+GGG + Chr3:61796763-61796782 None:intergenic 25.0%
! CATCACTTTGACAAAAAAAT+AGG - Chr3:61796217-61796236 MsG0380014872.01.T01:CDS 25.0%
! CATGCAATTATTACAACAAA+AGG - Chr3:61799787-61799806 MsG0380014872.01.T01:intron 25.0%
! GATAAAAGTTTATATAGAGG+AGG - Chr3:61797088-61797107 MsG0380014872.01.T01:CDS 25.0%
! GTAGGATCTAATAGAATAAA+GGG + Chr3:61797432-61797451 None:intergenic 25.0%
! TAACAAATTCAAAATGCATG+TGG + Chr3:61796401-61796420 None:intergenic 25.0%
! TAATTTACATGGCATAAAAC+TGG + Chr3:61798130-61798149 None:intergenic 25.0%
! TCACAAAATTACACGTATTA+TGG + Chr3:61796764-61796783 None:intergenic 25.0%
! TCAGAATTTGTAAGTTTCTT+TGG - Chr3:61800073-61800092 MsG0380014872.01.T01:CDS 25.0%
! TTTGATTCTTCTCTAATTTC+AGG - Chr3:61798416-61798435 MsG0380014872.01.T01:intron 25.0%
!! AAAATGTTTGACTGTAGTTT+TGG + Chr3:61798259-61798278 None:intergenic 25.0%
!! AAGATGGATTTATAATGTAC+AGG + Chr3:61798091-61798110 None:intergenic 25.0%
!! ATTTGTTACTTGAAGATTTC+AGG - Chr3:61799945-61799964 MsG0380014872.01.T01:intron 25.0%
!! TTCAATTTTTCATGATCCAA+TGG - Chr3:61797805-61797824 MsG0380014872.01.T01:intron 25.0%
!!! GGATGAGGTAATTTTTTTTA+GGG - Chr3:61796701-61796720 MsG0380014872.01.T01:intron 25.0%
!!! TCCTTCTAAAATAAGAAAAC+CGG + Chr3:61798672-61798691 None:intergenic 25.0%
!!! TGATTTTTAAGTATCATGAG+TGG + Chr3:61796112-61796131 None:intergenic 25.0%
!!! TGGATGAGGTAATTTTTTTT+AGG - Chr3:61796700-61796719 MsG0380014872.01.T01:intron 25.0%
AAACCATCATATCAATCACA+AGG + Chr3:61796191-61796210 None:intergenic 30.0%
AAATAAGGATCAATACCACA+TGG - Chr3:61795866-61795885 MsG0380014872.01.T01:exon 30.0%
AAATTACACGTATTATGGGA+AGG + Chr3:61796759-61796778 None:intergenic 30.0%
ACCAAGTGAATGATTCAAAT+GGG - Chr3:61795832-61795851 MsG0380014872.01.T01:three_prime_UTR 30.0%
ATTATATATAGTCGCTAGGA+TGG + Chr3:61797635-61797654 None:intergenic 30.0%
CTGCCTCAATAAAAACAATA+AGG + Chr3:61796439-61796458 None:intergenic 30.0%
GACATAAGATATCCAAACAA+GGG + Chr3:61799876-61799895 None:intergenic 30.0%
GAGAGACAGTAAAAAAGAAA+GGG + Chr3:61795964-61795983 None:intergenic 30.0%
GAGGTAATGATGTGTAATTA+AGG - Chr3:61797004-61797023 MsG0380014872.01.T01:CDS 30.0%
TAAAAAAGAAAGGGCAAGAA+AGG + Chr3:61795955-61795974 None:intergenic 30.0%
TAACAACACATGATTGAATG+AGG + Chr3:61797739-61797758 None:intergenic 30.0%
TACCAAGTGAATGATTCAAA+TGG - Chr3:61795831-61795850 MsG0380014872.01.T01:three_prime_UTR 30.0%
TAGAGATAACGATATGTGAA+TGG - Chr3:61797546-61797565 MsG0380014872.01.T01:intron 30.0%
TATAGAGAGAATGGTGTAAT+GGG - Chr3:61800114-61800133 MsG0380014872.01.T01:CDS 30.0%
TATGCAAATAGCTGAAGAAA+TGG + Chr3:61797865-61797884 None:intergenic 30.0%
TCAGTCAAATGCTAGTTAAT+TGG + Chr3:61798395-61798414 None:intergenic 30.0%
TCTCAAATTATTAGCAGTGT+CGG - Chr3:61799440-61799459 MsG0380014872.01.T01:intron 30.0%
TGACATAAGATATCCAAACA+AGG + Chr3:61799877-61799896 None:intergenic 30.0%
TGAGAGACAGTAAAAAAGAA+AGG + Chr3:61795965-61795984 None:intergenic 30.0%
TGATACCATGTTGAAATTTG+AGG + Chr3:61797156-61797175 None:intergenic 30.0%
TGGTCTAAATTCCTTTGTTA+TGG - Chr3:61799541-61799560 MsG0380014872.01.T01:intron 30.0%
TTAACGTAGAATCATCAAGA+TGG + Chr3:61798107-61798126 None:intergenic 30.0%
TTCAGTGTAATTATGTGTGT+CGG + Chr3:61799409-61799428 None:intergenic 30.0%
! AAATGCTACGTAACCATTTT+TGG + Chr3:61798047-61798066 None:intergenic 30.0%
! CTAGTTAATTGGTAATCAGT+TGG + Chr3:61798384-61798403 None:intergenic 30.0%
! GCATTCATTTTCAGCTATTT+GGG - Chr3:61797471-61797490 MsG0380014872.01.T01:CDS 30.0%
! GTGTAATGGGAACTTTAATT+TGG - Chr3:61800127-61800146 MsG0380014872.01.T01:CDS 30.0%
! TGCATTCATTTTCAGCTATT+TGG - Chr3:61797470-61797489 MsG0380014872.01.T01:CDS 30.0%
! TGTTATTTGACGGAAATCAA+AGG - Chr3:61796982-61797001 MsG0380014872.01.T01:CDS 30.0%
! TTTTCACTTGCTCATGAAAT+TGG - Chr3:61797975-61797994 MsG0380014872.01.T01:intron 30.0%
!! ATTCTAGGGTACTTAATGTT+TGG - Chr3:61799618-61799637 MsG0380014872.01.T01:intron 30.0%
!! TAGGTTTTTCGATTCAAAAG+TGG + Chr3:61798169-61798188 None:intergenic 30.0%
!!! ACCGGTTTTCTTATTTTAGA+AGG - Chr3:61798668-61798687 MsG0380014872.01.T01:intron 30.0%
!!! ACTTTTTCATCTTCCAAAAG+TGG + Chr3:61795810-61795829 None:intergenic 30.0%
!!! GCATGAAACCTTTGTTTTTA+TGG + Chr3:61799772-61799791 None:intergenic 30.0%
!!! TTTTGCTATTGGATTGACTA+AGG + Chr3:61799718-61799737 None:intergenic 30.0%
AAAAGAAATGGCTTAGTGCA+CGG + Chr3:61799295-61799314 None:intergenic 35.0%
AAGATATCCAAACAAGGGAA+TGG + Chr3:61799871-61799890 None:intergenic 35.0%
ATAGATCATAGCTCAAGTCA+TGG + Chr3:61799318-61799337 None:intergenic 35.0%
ATGAAGTAACTGAAACAGCT+CGG + Chr3:61799056-61799075 None:intergenic 35.0%
ATGCCATGTAAATTACTTGC+TGG - Chr3:61798135-61798154 MsG0380014872.01.T01:intron 35.0%
ATGCTAAAAAGCTTGCAGAT+AGG + Chr3:61799572-61799591 None:intergenic 35.0%
ATGTCCTCTAACAAAACAGT+AGG + Chr3:61798797-61798816 None:intergenic 35.0%
CAAAAGTGGTACTTCAATGA+AGG + Chr3:61795796-61795815 None:intergenic 35.0%
CACATTGGTCAAAAAATGCA+TGG - Chr3:61798535-61798554 MsG0380014872.01.T01:intron 35.0%
CAGGATCATACAAGAGATAT+GGG - Chr3:61799964-61799983 MsG0380014872.01.T01:intron 35.0%
CAGTCATCATTTGGATACAA+TGG + Chr3:61797506-61797525 None:intergenic 35.0%
CATCTAGTTAATGCTATCTC+AGG - Chr3:61795927-61795946 MsG0380014872.01.T01:CDS 35.0%
CATTACACCATTCTCTCTAT+AGG + Chr3:61800115-61800134 None:intergenic 35.0%
CCAAGTGAATGATTCAAATG+GGG - Chr3:61795833-61795852 MsG0380014872.01.T01:three_prime_UTR 35.0%
CGTAATTACAACTTCGTTCA+CGG + Chr3:61796838-61796857 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG + Chr3:61797132-61797151 None:intergenic 35.0%
CTATAGAGAGAATGGTGTAA+TGG - Chr3:61800113-61800132 MsG0380014872.01.T01:CDS 35.0%
CTCAAGTCATGGAAAAGAAA+TGG + Chr3:61799307-61799326 None:intergenic 35.0%
CTGAGATAGCATTAACTAGA+TGG + Chr3:61795929-61795948 None:intergenic 35.0%
CTTAAAACCCACATTGAGAA+TGG + Chr3:61796084-61796103 None:intergenic 35.0%
GAATCGAAAAACCTAAGTGA+CGG - Chr3:61798174-61798193 MsG0380014872.01.T01:intron 35.0%
GACAAAGTGAAAATCAGAGT+AGG + Chr3:61797450-61797469 None:intergenic 35.0%
GATACCATTAATCTCCCTTT+GGG + Chr3:61798614-61798633 None:intergenic 35.0%
GCAATATCTCAGTCATCATT+TGG + Chr3:61797515-61797534 None:intergenic 35.0%
GTAACATTAAACCTCCAAAC+AGG - Chr3:61799660-61799679 MsG0380014872.01.T01:intron 35.0%
GTAATTACAACTTCGTTCAC+GGG + Chr3:61796837-61796856 None:intergenic 35.0%
GTTGTTATCATAAGCTATCC+TGG + Chr3:61799188-61799207 None:intergenic 35.0%
TAACCTATGAAGCACATATG+CGG + Chr3:61799501-61799520 None:intergenic 35.0%
TATTTGACGGAAATCAAAGG+AGG - Chr3:61796985-61797004 MsG0380014872.01.T01:CDS 35.0%
TCAGGATCATACAAGAGATA+TGG - Chr3:61799963-61799982 MsG0380014872.01.T01:intron 35.0%
TGACTGAGATATTGCTTTCA+AGG - Chr3:61797520-61797539 MsG0380014872.01.T01:intron 35.0%
TGATACCATTAATCTCCCTT+TGG + Chr3:61798615-61798634 None:intergenic 35.0%
TGCCATGTAAATTACTTGCT+GGG - Chr3:61798136-61798155 MsG0380014872.01.T01:intron 35.0%
TGGATGAGCACTATAACAAA+AGG + Chr3:61798975-61798994 None:intergenic 35.0%
TGGGGTTGTGTCAAAAAATA+AGG - Chr3:61795851-61795870 MsG0380014872.01.T01:three_prime_UTR 35.0%
TTAGGCCTCAAATTTCAACA+TGG - Chr3:61797148-61797167 MsG0380014872.01.T01:CDS 35.0%
TTGAACTCAACTTTCCTGTT+TGG + Chr3:61799677-61799696 None:intergenic 35.0%
TTGTAGAGAGTAGGAAGAAT+TGG + Chr3:61798995-61799014 None:intergenic 35.0%
! AAAGTCTTATCTATCCGATG+TGG + Chr3:61797272-61797291 None:intergenic 35.0%
! AAATCTGAAGTGAAGAATCC+CGG - Chr3:61798318-61798337 MsG0380014872.01.T01:intron 35.0%
! AAGTCTTATCTATCCGATGT+GGG + Chr3:61797271-61797290 None:intergenic 35.0%
! ATCTTTTCGTTGTTGTGGAA+TGG - Chr3:61798869-61798888 MsG0380014872.01.T01:intron 35.0%
! CAGGAAAGGTTCTGATATTA+AGG + Chr3:61798568-61798587 None:intergenic 35.0%
! CATTCTCAATGTGGGTTTTA+AGG - Chr3:61796082-61796101 MsG0380014872.01.T01:CDS 35.0%
! CTAAATTCCTTTGTTATGGC+AGG - Chr3:61799545-61799564 MsG0380014872.01.T01:intron 35.0%
! CTCATTTTCATAAACTCTCC+AGG - Chr3:61799167-61799186 MsG0380014872.01.T01:intron 35.0%
! CTTTTCCACATTCGTCTTTT+AGG - Chr3:61796810-61796829 MsG0380014872.01.T01:intron 35.0%
! GGATATCTTATGTCACTTGT+TGG - Chr3:61799882-61799901 MsG0380014872.01.T01:intron 35.0%
! TCTTCATCTTTTCGTTGTTG+TGG - Chr3:61798864-61798883 MsG0380014872.01.T01:intron 35.0%
! TCTTCTCTAATTTCAGGTGT+TGG - Chr3:61798422-61798441 MsG0380014872.01.T01:intron 35.0%
! TTGTTGTCTTATGTTTCTGC+CGG - Chr3:61798821-61798840 MsG0380014872.01.T01:intron 35.0%
! TTTTCCTCCTATAGAGAGAA+TGG - Chr3:61800105-61800124 MsG0380014872.01.T01:CDS 35.0%
!! AGCTTTTTAGCATGCACTAT+TGG - Chr3:61799579-61799598 MsG0380014872.01.T01:intron 35.0%
!! CTTCATTGAAGTACCACTTT+TGG - Chr3:61795794-61795813 MsG0380014872.01.T01:three_prime_UTR 35.0%
!! GTAAAGGAAGGGTTTTTAGA+TGG - Chr3:61798918-61798937 MsG0380014872.01.T01:intron 35.0%
!! GTTTTTCGATTCAAAAGTGG+TGG + Chr3:61798166-61798185 None:intergenic 35.0%
!! TTTGCCTACTGTTTTGTTAG+AGG - Chr3:61798790-61798809 MsG0380014872.01.T01:intron 35.0%
AACATGCATTTGGACCCAAA+GGG - Chr3:61798597-61798616 MsG0380014872.01.T01:intron 40.0%
AACTCAACTTTCCTGTTTGG+AGG + Chr3:61799674-61799693 None:intergenic 40.0%
AATGCATGTTGACCTATGTC+AGG + Chr3:61798587-61798606 None:intergenic 40.0%
AATGGTGCAATTGATGGAAC+AGG - Chr3:61798887-61798906 MsG0380014872.01.T01:intron 40.0%
ACAATCCTCACCTTACAAAC+CGG - Chr3:61797315-61797334 MsG0380014872.01.T01:CDS 40.0%
ACTAACAAAATGGGCACCAT+TGG + Chr3:61797824-61797843 None:intergenic 40.0%
AGGAAAGTTGAGTTCAAGAG+TGG - Chr3:61799680-61799699 MsG0380014872.01.T01:intron 40.0%
AGGGAATATGCCAAAACTGA+TGG - Chr3:61796720-61796739 MsG0380014872.01.T01:intron 40.0%
AGGGTTTCATGGTAAAGGAA+GGG - Chr3:61798907-61798926 MsG0380014872.01.T01:intron 40.0%
ATACCTTATGCACTAGCATC+TGG - Chr3:61798455-61798474 MsG0380014872.01.T01:intron 40.0%
ATCACAGCTTGTCGAATTCA+AGG - Chr3:61797172-61797191 MsG0380014872.01.T01:CDS 40.0%
ATCAGAACCTTTCCTGACAT+AGG - Chr3:61798572-61798591 MsG0380014872.01.T01:intron 40.0%
ATCTATCCGATGTGGAACTT+GGG + Chr3:61797059-61797078 None:intergenic 40.0%
ATGGTGCAATTGATGGAACA+GGG - Chr3:61798888-61798907 MsG0380014872.01.T01:intron 40.0%
ATGTTGACCTATGTCAGGAA+AGG + Chr3:61798582-61798601 None:intergenic 40.0%
ATGTTGTTACACAGGCACAT+TGG - Chr3:61798520-61798539 MsG0380014872.01.T01:intron 40.0%
ATTGATGGAACAGGGTTTCA+TGG - Chr3:61798896-61798915 MsG0380014872.01.T01:intron 40.0%
CAACAAAAGGGTCACACATA+TGG - Chr3:61799800-61799819 MsG0380014872.01.T01:intron 40.0%
CAAGAGATATGGGTGTGAAA+TGG - Chr3:61799974-61799993 MsG0380014872.01.T01:intron 40.0%
CAATACCACATGGTTCATGT+TGG - Chr3:61795876-61795895 MsG0380014872.01.T01:CDS 40.0%
CACCAATTGTTAATCCTGCT+AGG + Chr3:61798733-61798752 None:intergenic 40.0%
CACCTAGCAGGATTAACAAT+TGG - Chr3:61798728-61798747 MsG0380014872.01.T01:intron 40.0%
CCCCATTTGAATCATTCACT+TGG + Chr3:61795836-61795855 None:intergenic 40.0%
CGTCCTTGTGATTGATATGA+TGG - Chr3:61796185-61796204 MsG0380014872.01.T01:CDS 40.0%
CTAGCAGGATTAACAATTGG+TGG - Chr3:61798731-61798750 MsG0380014872.01.T01:intron 40.0%
GAAAAACCCAAGTTCCACAT+CGG - Chr3:61797050-61797069 MsG0380014872.01.T01:CDS 40.0%
GACATAGGTCAACATGCATT+TGG - Chr3:61798587-61798606 MsG0380014872.01.T01:intron 40.0%
GAGCTATGATCTATGAAGCA+TGG - Chr3:61799324-61799343 MsG0380014872.01.T01:intron 40.0%
GCAAACAAACTAACAGCAGA+AGG + Chr3:61798953-61798972 None:intergenic 40.0%
GGTCAAAAAATGCATGGACA+TGG - Chr3:61798541-61798560 MsG0380014872.01.T01:intron 40.0%
GTTTCACTAGCTCACGAAAT+TGG + Chr3:61798229-61798248 None:intergenic 40.0%
TACACCATTCTCTCTATAGG+AGG + Chr3:61800112-61800131 None:intergenic 40.0%
TACTCTCTACAACTCGATGA+GGG - Chr3:61799003-61799022 MsG0380014872.01.T01:intron 40.0%
TATCTATCCGATGTGGAACT+TGG + Chr3:61797060-61797079 None:intergenic 40.0%
TCACAGCTTGTCGAATTCAA+GGG - Chr3:61797173-61797192 MsG0380014872.01.T01:CDS 40.0%
TCATATCAATCACAAGGACG+AGG + Chr3:61796185-61796204 None:intergenic 40.0%
TGCCCAGCAAGTAATTTACA+TGG + Chr3:61798141-61798160 None:intergenic 40.0%
TTGGTCTCCATTCTCAATGT+GGG - Chr3:61796074-61796093 MsG0380014872.01.T01:CDS 40.0%
TTGTGGAATGGTGCAATTGA+TGG - Chr3:61798881-61798900 MsG0380014872.01.T01:intron 40.0%
TTTGGTCTCCATTCTCAATG+TGG - Chr3:61796073-61796092 MsG0380014872.01.T01:CDS 40.0%
! AGAGTCTTATCTATCCGATG+TGG + Chr3:61797067-61797086 None:intergenic 40.0%
! GATTAGACATGTTTCGGTGT+TGG - Chr3:61799357-61799376 MsG0380014872.01.T01:intron 40.0%
! TCCTCGGATTAGACATGTTT+CGG - Chr3:61799351-61799370 MsG0380014872.01.T01:intron 40.0%
! TGGAGAACAAGTTGAATCAC+AGG - Chr3:61799638-61799657 MsG0380014872.01.T01:intron 40.0%
!! CCTTACAAAACCGGTTTGTA+AGG + Chr3:61797328-61797347 None:intergenic 40.0%
!! CCTTACAAACCGGTTTTGTA+AGG - Chr3:61797325-61797344 MsG0380014872.01.T01:CDS 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - Chr3:61797130-61797149 MsG0380014872.01.T01:CDS 40.0%
!! CGTTCGGTACTAGTTTGTTA+AGG + Chr3:61798700-61798719 None:intergenic 40.0%
!! GAACTCTATCTTGCTGTTAC+CGG - Chr3:61798650-61798669 MsG0380014872.01.T01:intron 40.0%
!! GGTAATCAGTTGGTAATGCA+GGG + Chr3:61798374-61798393 None:intergenic 40.0%
!! TGGTAATCAGTTGGTAATGC+AGG + Chr3:61798375-61798394 None:intergenic 40.0%
!!! AGTTTTTTGGACCGTCACTT+AGG + Chr3:61798188-61798207 None:intergenic 40.0%
!!! CTCAATGTGGGTTTTAAGGT+GGG - Chr3:61796086-61796105 MsG0380014872.01.T01:CDS 40.0%
!!! TCTCAATGTGGGTTTTAAGG+TGG - Chr3:61796085-61796104 MsG0380014872.01.T01:CDS 40.0%
AACGTGCAAATTCACCTAGC+AGG - Chr3:61798716-61798735 MsG0380014872.01.T01:intron 45.0%
AATGCATGTGGCACATGTGT+TGG + Chr3:61796389-61796408 None:intergenic 45.0%
ACCGAAACATGTCTAATCCG+AGG + Chr3:61799355-61799374 None:intergenic 45.0%
ATCTATCCGATGTGGGACTT+GGG + Chr3:61797264-61797283 None:intergenic 45.0%
ATGAAGCACATATGCGGACA+CGG + Chr3:61799495-61799514 None:intergenic 45.0%
ATGCAGCAGCAGCAATTCTA+GGG - Chr3:61799604-61799623 MsG0380014872.01.T01:intron 45.0%
CAACATGCATTTGGACCCAA+AGG - Chr3:61798596-61798615 MsG0380014872.01.T01:intron 45.0%
CAGGGTTTCATGGTAAAGGA+AGG - Chr3:61798906-61798925 MsG0380014872.01.T01:intron 45.0%
CGTTACCAACATGAACCATG+TGG + Chr3:61795884-61795903 None:intergenic 45.0%
CTACTCTCTACAACTCGATG+AGG - Chr3:61799002-61799021 MsG0380014872.01.T01:intron 45.0%
GAAAAACCCAAGTCCCACAT+CGG - Chr3:61797255-61797274 MsG0380014872.01.T01:CDS 45.0%
GATAGGACCTGCCATAACAA+AGG + Chr3:61799555-61799574 None:intergenic 45.0%
GCCATAGCATGTTGTTACAC+AGG - Chr3:61798512-61798531 MsG0380014872.01.T01:intron 45.0%
GCCTGTGTAACAACATGCTA+TGG + Chr3:61798516-61798535 None:intergenic 45.0%
GCTAGGTGAATTTGCACGTT+CGG + Chr3:61798716-61798735 None:intergenic 45.0%
GGAACAGGGTTTCATGGTAA+AGG - Chr3:61798902-61798921 MsG0380014872.01.T01:intron 45.0%
TATCTATCCGATGTGGGACT+TGG + Chr3:61797265-61797284 None:intergenic 45.0%
TATGAAGCATGGACACTCCT+CGG - Chr3:61799335-61799354 MsG0380014872.01.T01:intron 45.0%
TATGCAGCAGCAGCAATTCT+AGG - Chr3:61799603-61799622 MsG0380014872.01.T01:intron 45.0%
TGGACCCAAAGGGAGATTAA+TGG - Chr3:61798607-61798626 MsG0380014872.01.T01:intron 45.0%
TGTCCGCATATGTGCTTCAT+AGG - Chr3:61799495-61799514 MsG0380014872.01.T01:intron 45.0%
! CTCATCGAGTTGTAGAGAGT+AGG + Chr3:61799004-61799023 None:intergenic 45.0%
! TGGACACTCACCATCAGTTT+TGG + Chr3:61796733-61796752 None:intergenic 45.0%
! TTGTCTTATGTTTCTGCCGG+TGG - Chr3:61798824-61798843 MsG0380014872.01.T01:intron 45.0%
!! CAAAACCGGTTTGTAAGGTG+AGG + Chr3:61797323-61797342 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + Chr3:61797123-61797142 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - Chr3:61797120-61797139 MsG0380014872.01.T01:CDS 45.0%
!! GGAAGGGTTTTTAGATGGAG+TGG - Chr3:61798923-61798942 MsG0380014872.01.T01:intron 45.0%
!! TATGTGTGTCGGTGTCATGT+CGG + Chr3:61799398-61799417 None:intergenic 45.0%
!!! GGGGTTGCTATTGCTGTTTT+TGG - Chr3:61800023-61800042 MsG0380014872.01.T01:intron 45.0%
!!! TTTTTTTTTATAAATATGAT+TGG - Chr3:61796680-61796699 MsG0380014872.01.T01:intron 5.0%
ATGCACTAGCATCTGGAGGA+TGG - Chr3:61798462-61798481 MsG0380014872.01.T01:intron 50.0%
ATGCAGGGACGTTGATATGC+AGG + Chr3:61798359-61798378 None:intergenic 50.0%
CACGTATTATGGGAAGGCTC+TGG + Chr3:61796753-61796772 None:intergenic 50.0%
CCTCCAGATGCTAGTGCATA+AGG + Chr3:61798461-61798480 None:intergenic 50.0%
CCTTATGCACTAGCATCTGG+AGG - Chr3:61798458-61798477 MsG0380014872.01.T01:intron 50.0%
CGGGTCCTAAAAGACGAATG+TGG + Chr3:61796818-61796837 None:intergenic 50.0%
GCAATCCTCACCTTACAAGC+CGG - Chr3:61797110-61797129 MsG0380014872.01.T01:CDS 50.0%
GCTGTGACCATTCCCTTGTT+TGG - Chr3:61799861-61799880 MsG0380014872.01.T01:intron 50.0%
GTCAGTGTCTGTGTTGTGTC+TGG - Chr3:61799466-61799485 MsG0380014872.01.T01:intron 50.0%
TGCAGGGACGTTGATATGCA+GGG + Chr3:61798358-61798377 None:intergenic 50.0%
! CGATGAAGCTAAAGCACCAC+CGG + Chr3:61798843-61798862 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + Chr3:61797118-61797137 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+CGG + Chr3:61797206-61797225 None:intergenic 50.0%
AGGGGTCTGAGTTCGAATCC+GGG + Chr3:61798339-61798358 None:intergenic 55.0%
CAGGGGTCTGAGTTCGAATC+CGG + Chr3:61798340-61798359 None:intergenic 55.0%
GCAGGGACGTTGATATGCAG+GGG + Chr3:61798357-61798376 None:intergenic 55.0%
TTGGTGCGTGAATCGGTAGG+TGG + Chr3:61797199-61797218 None:intergenic 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG - Chr3:61797213-61797232 MsG0380014872.01.T01:CDS 55.0%
CGTCACGCCCAGCACTCTTT+GGG + Chr3:61797223-61797242 None:intergenic 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG - Chr3:61797212-61797231 MsG0380014872.01.T01:CDS 60.0%
!! AAAGAGTGCTGGGCGTGACG+GGG - Chr3:61797223-61797242 MsG0380014872.01.T01:CDS 60.0%
!! CAAAGAGTGCTGGGCGTGAC+GGG - Chr3:61797222-61797241 MsG0380014872.01.T01:CDS 60.0%
!! CCAAAGAGTGCTGGGCGTGA+CGG - Chr3:61797221-61797240 MsG0380014872.01.T01:CDS 60.0%
!! GGCTTGGTGCGTGAATCGGT+AGG + Chr3:61797202-61797221 None:intergenic 60.0%
CCGTCACGCCCAGCACTCTT+TGG + Chr3:61797224-61797243 None:intergenic 65.0%
CGCCCAGCACTCTTTGGGCT+TGG + Chr3:61797218-61797237 None:intergenic 65.0%
!! AAGAGTGCTGGGCGTGACGG+GGG - Chr3:61797224-61797243 MsG0380014872.01.T01:CDS 65.0%
! GGGCGTGACGGGGGTGCATT+GGG - Chr3:61797233-61797252 MsG0380014872.01.T01:CDS 70.0%
! TGGGCGTGACGGGGGTGCAT+TGG - Chr3:61797232-61797251 MsG0380014872.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 61795765 61800192 61795765 ID=MsG0380014872.01;Name=MsG0380014872.01
Chr3 mRNA 61795765 61800192 61795765 ID=MsG0380014872.01.T01;Parent=MsG0380014872.01;Name=MsG0380014872.01.T01;_AED=0.35;_eAED=0.35;_QI=0|0.5|0.66|1|1|1|3|107|419
Chr3 exon 61795765 61796390 61795765 ID=MsG0380014872.01.T01:exon:29343;Parent=MsG0380014872.01.T01
Chr3 exon 61796912 61797519 61796912 ID=MsG0380014872.01.T01:exon:29342;Parent=MsG0380014872.01.T01
Chr3 exon 61800060 61800192 61800060 ID=MsG0380014872.01.T01:exon:29341;Parent=MsG0380014872.01.T01
Chr3 CDS 61800060 61800192 61800060 ID=MsG0380014872.01.T01:cds;Parent=MsG0380014872.01.T01
Chr3 CDS 61796912 61797519 61796912 ID=MsG0380014872.01.T01:cds;Parent=MsG0380014872.01.T01
Chr3 CDS 61795872 61796390 61795872 ID=MsG0380014872.01.T01:cds;Parent=MsG0380014872.01.T01
Chr3 three_prime_UTR 61795765 61795871 61795765 ID=MsG0380014872.01.T01:three_prime_utr;Parent=MsG0380014872.01.T01
Gene Sequence

>MsG0380014872.01.T01

ATGGCTGCTGAGCAAGGTGATCGATTTTCCTTCATTGAAGTACCACTTTTGGAAGATGAAAAAGTTTACCAAGTGAATGATTCAAATGGGGTTGTGTCAAAAAATAAGGATCAATACCACATGGTTCATGTTGGTGTTGGTATTGTCTCAATACCTTATGCACTAGCATCTGGAGGATGGTTAAGCATTTTGCTACTATTCACAATAGCCATAGCATGTTGTTACACAGGCACATTGGTCAAAAAATGCATGGACATGGACCTTAATATCAGAACCTTTCCTGACATAGGTCAACATGCATTTGGACCCAAAGGGAGATTAATGGTATCAATCATCATGAATGCTGAACTCTATCTTGCTGTTACCGGTTTTCTTATTTTAGAAGGAGACAACCTTAACAAACTAGTACCGAACGTGCAAATTCACCTAGCAGGATTAACAATTGGTGGCACAACAATGTTTACTATGATTACTGCTCTTGTTATTTTGCCTACTGTTTTGTTAGAGGACATGAGTTTGTTGTCTTATGTTTCTGCCGGTGGTGCTTTAGCTTCATCGATCTTCATCTTTTCGTTGTTGTGGAATGGTGCAATTGATGGAACAGGGTTTCATGGTAAAGGAAGGGTTTTTAGATGGAGTGGAATACCTTCTGCTGTTAGTTTGTTTGCCTTTTGTTATAGTGCTCATCCAATTCTTCCTACTCTCTACAACTCGATGAGGGACAAAAGTCGTTTTTACAGTGTCCTATCTGCAAGCTTTTTAGCATGCACTATTGGTTATGCAGCAGCAGCAATTCTAGGGTACTTAATGTTTGGAGAACAAGTTGAATCACAGGTAACATTAAACCTCCAAACAGGAAAGTTGAGTTCAAGAGTGGCAATATACACTACCTTAGTCAATCCAATAGCAAAATATGCATTAATGCTTACTCCAGTCATAAATGCCATAAAAACAAAGGTTTCATGCAATTATTACAACAAAAGGGTCACACATATGGTTATTAGTACATCTTTATTAGTAGGTTCTCTTACTATAGCTGTGACCATTCCCTTGTTTGGATATCTTATGTCACTTGTTGGAGCATTGTTAAGTGTCTCAGCTTCAATTTTAGTGCCATCAATTTGTTACTTGAAGATTTCAGGATCATACAAGAGATATGGGTGTGAAATGGTTATTAATTATTCAATAATTGTAATGGGGGTTGCTATTGCTGTTTTTGGTACTTATAGATCTCTTGTAGATATAATTCAGAATTTGTAA
Protein sequence

>MsG0380014872.01.T01

MAAEQGDRFSFIEVPLLEDEKVYQVNDSNGVVSKNKDQYHMVHVGVGIVSIPYALASGGWLSILLLFTIAIACCYTGTLVKKCMDMDLNIRTFPDIGQHAFGPKGRLMVSIIMNAELYLAVTGFLILEGDNLNKLVPNVQIHLAGLTIGGTTMFTMITALVILPTVLLEDMSLLSYVSAGGALASSIFIFSLLWNGAIDGTGFHGKGRVFRWSGIPSAVSLFAFCYSAHPILPTLYNSMRDKSRFYSVLSASFLACTIGYAAAAILGYLMFGEQVESQVTLNLQTGKLSSRVAIYTTLVNPIAKYALMLTPVINAIKTKVSCNYYNKRVTHMVISTSLLVGSLTIAVTIPLFGYLMSLVGALLSVSASILVPSICYLKISGSYKRYGCEMVINYSIIVMGVAIAVFGTYRSLVDIIQNL*