Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014989.01.T01 | PNX55892.1 | 83.908 | 87 | 14 | 0 | 1 | 87 | 8 | 94 | 5.93E-42 | 146 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014989.01.T01 | Q6J540 | 70.115 | 87 | 26 | 0 | 1 | 87 | 330 | 416 | 3.50E-34 | 125 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014989.01.T01 | A0A2K3JPC4 | 83.908 | 87 | 14 | 0 | 1 | 87 | 8 | 94 | 2.83e-42 | 146 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0380014989.01 | MsG0380014990.01 | 0.869753 | 2.445329e-66 | 9.278298e-63 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014989.01.T01 | MTR_3g467220 | 82.558 | 86 | 15 | 0 | 2 | 87 | 326 | 411 | 1.50e-40 | 139 |
MsG0380014989.01.T01 | MTR_3g467200 | 83.333 | 78 | 13 | 0 | 1 | 78 | 330 | 407 | 9.28e-39 | 134 |
MsG0380014989.01.T01 | MTR_3g465300 | 69.767 | 86 | 26 | 0 | 2 | 87 | 328 | 413 | 1.40e-34 | 123 |
MsG0380014989.01.T01 | MTR_8g073950 | 68.421 | 76 | 24 | 0 | 2 | 77 | 324 | 399 | 8.61e-31 | 113 |
MsG0380014989.01.T01 | MTR_8g073960 | 67.532 | 77 | 25 | 0 | 2 | 78 | 328 | 404 | 2.52e-30 | 111 |
MsG0380014989.01.T01 | MTR_8g076390 | 71.831 | 71 | 20 | 0 | 2 | 72 | 340 | 410 | 2.72e-30 | 111 |
MsG0380014989.01.T01 | MTR_3g467290 | 61.628 | 86 | 33 | 0 | 2 | 87 | 336 | 421 | 3.71e-30 | 111 |
MsG0380014989.01.T01 | MTR_8g075500 | 64.286 | 56 | 20 | 0 | 16 | 71 | 1 | 56 | 7.57e-20 | 79.7 |
MsG0380014989.01.T01 | MTR_8g020940 | 48.529 | 68 | 35 | 0 | 9 | 76 | 317 | 384 | 9.39e-18 | 76.6 |
MsG0380014989.01.T01 | MTR_3g436540 | 46.479 | 71 | 38 | 0 | 3 | 73 | 313 | 383 | 1.09e-16 | 73.6 |
MsG0380014989.01.T01 | MTR_4g088170 | 52.459 | 61 | 29 | 0 | 3 | 63 | 307 | 367 | 2.31e-16 | 72.4 |
MsG0380014989.01.T01 | MTR_4g102280 | 46.667 | 75 | 40 | 0 | 3 | 77 | 318 | 392 | 2.35e-16 | 72.4 |
MsG0380014989.01.T01 | MTR_8g020960 | 41.892 | 74 | 43 | 0 | 3 | 76 | 312 | 385 | 2.56e-16 | 72.4 |
MsG0380014989.01.T01 | MTR_3g024520 | 41.667 | 72 | 42 | 0 | 3 | 74 | 309 | 380 | 3.24e-16 | 72.0 |
MsG0380014989.01.T01 | MTR_3g436390 | 43.662 | 71 | 40 | 0 | 3 | 73 | 306 | 376 | 4.77e-16 | 71.6 |
MsG0380014989.01.T01 | MTR_7g056103 | 47.619 | 63 | 33 | 0 | 3 | 65 | 310 | 372 | 5.59e-16 | 71.2 |
MsG0380014989.01.T01 | MTR_3g025230 | 43.056 | 72 | 41 | 0 | 3 | 74 | 309 | 380 | 6.67e-16 | 71.2 |
MsG0380014989.01.T01 | MTR_0171s0010 | 45.205 | 73 | 40 | 0 | 3 | 75 | 316 | 388 | 6.80e-16 | 71.2 |
MsG0380014989.01.T01 | MTR_4g088195 | 50.820 | 61 | 30 | 0 | 3 | 63 | 307 | 367 | 7.58e-16 | 70.9 |
MsG0380014989.01.T01 | MTR_7g092600 | 38.961 | 77 | 47 | 0 | 3 | 79 | 311 | 387 | 8.25e-16 | 70.9 |
MsG0380014989.01.T01 | MTR_4g095050 | 41.892 | 74 | 43 | 0 | 3 | 76 | 309 | 382 | 9.55e-16 | 70.9 |
MsG0380014989.01.T01 | MTR_7g027960 | 54.098 | 61 | 28 | 0 | 3 | 63 | 304 | 364 | 1.99e-15 | 69.7 |
MsG0380014989.01.T01 | MTR_8g076372 | 60.377 | 53 | 21 | 0 | 2 | 54 | 328 | 380 | 3.08e-15 | 69.3 |
MsG0380014989.01.T01 | MTR_7g028020 | 52.459 | 61 | 29 | 0 | 3 | 63 | 304 | 364 | 3.40e-15 | 69.3 |
MsG0380014989.01.T01 | MTR_8g020950 | 40.541 | 74 | 44 | 0 | 3 | 76 | 313 | 386 | 3.56e-15 | 68.9 |
MsG0380014989.01.T01 | MTR_0171s0030 | 46.774 | 62 | 33 | 0 | 2 | 63 | 225 | 286 | 7.71e-15 | 68.2 |
MsG0380014989.01.T01 | MTR_7g087520 | 44.118 | 68 | 38 | 0 | 10 | 77 | 324 | 391 | 1.06e-14 | 67.8 |
MsG0380014989.01.T01 | MTR_4g088160 | 47.541 | 61 | 32 | 0 | 3 | 63 | 307 | 367 | 1.12e-14 | 67.8 |
MsG0380014989.01.T01 | MTR_7g075540 | 44.286 | 70 | 39 | 0 | 2 | 71 | 306 | 375 | 1.19e-14 | 67.8 |
MsG0380014989.01.T01 | MTR_0451s0010 | 39.189 | 74 | 45 | 0 | 3 | 76 | 129 | 202 | 1.35e-14 | 67.0 |
MsG0380014989.01.T01 | MTR_3g020780 | 45.902 | 61 | 33 | 0 | 3 | 63 | 315 | 375 | 1.61e-14 | 67.4 |
MsG0380014989.01.T01 | MTR_8g468780 | 42.857 | 63 | 36 | 0 | 3 | 65 | 243 | 305 | 2.31e-14 | 66.6 |
MsG0380014989.01.T01 | MTR_5g016410 | 41.892 | 74 | 43 | 0 | 3 | 76 | 305 | 378 | 2.60e-14 | 66.6 |
MsG0380014989.01.T01 | MTR_8g469300 | 44.262 | 61 | 34 | 0 | 3 | 63 | 312 | 372 | 3.70e-14 | 66.2 |
MsG0380014989.01.T01 | MTR_0638s0020 | 37.333 | 75 | 47 | 0 | 2 | 76 | 235 | 309 | 5.12e-14 | 65.9 |
MsG0380014989.01.T01 | MTR_2g065360 | 37.838 | 74 | 46 | 0 | 3 | 76 | 279 | 352 | 5.74e-14 | 65.9 |
MsG0380014989.01.T01 | MTR_0171s0020 | 39.726 | 73 | 44 | 0 | 3 | 75 | 314 | 386 | 7.03e-14 | 65.5 |
MsG0380014989.01.T01 | MTR_7g075610 | 41.429 | 70 | 41 | 0 | 2 | 71 | 309 | 378 | 1.34e-13 | 64.7 |
MsG0380014989.01.T01 | MTR_4g102310 | 44.000 | 75 | 42 | 0 | 3 | 77 | 312 | 386 | 1.61e-13 | 64.3 |
MsG0380014989.01.T01 | MTR_3g025260 | 36.111 | 72 | 46 | 0 | 3 | 74 | 309 | 380 | 2.02e-13 | 64.3 |
MsG0380014989.01.T01 | MTR_2g437840 | 37.143 | 70 | 44 | 0 | 9 | 78 | 311 | 380 | 2.07e-13 | 63.9 |
MsG0380014989.01.T01 | MTR_4g078110 | 43.478 | 69 | 39 | 0 | 3 | 71 | 284 | 352 | 2.93e-13 | 63.5 |
MsG0380014989.01.T01 | MTR_4g062500 | 45.902 | 61 | 33 | 0 | 3 | 63 | 316 | 376 | 3.32e-13 | 63.5 |
MsG0380014989.01.T01 | MTR_4g088425 | 43.939 | 66 | 37 | 0 | 11 | 76 | 317 | 382 | 3.55e-13 | 63.5 |
MsG0380014989.01.T01 | MTR_7g075580 | 43.478 | 69 | 39 | 0 | 3 | 71 | 309 | 377 | 5.55e-13 | 62.8 |
MsG0380014989.01.T01 | MTR_4g094775 | 38.158 | 76 | 47 | 0 | 3 | 78 | 305 | 380 | 5.99e-13 | 62.8 |
MsG0380014989.01.T01 | MTR_4g109470 | 37.838 | 74 | 46 | 0 | 3 | 76 | 306 | 379 | 6.25e-13 | 62.8 |
MsG0380014989.01.T01 | MTR_1g037370 | 42.029 | 69 | 40 | 0 | 3 | 71 | 301 | 369 | 9.66e-13 | 62.4 |
MsG0380014989.01.T01 | MTR_8g091680 | 33.766 | 77 | 51 | 0 | 2 | 78 | 257 | 333 | 1.20e-12 | 62.0 |
MsG0380014989.01.T01 | MTR_7g092620 | 36.842 | 76 | 48 | 0 | 3 | 78 | 312 | 387 | 5.39e-12 | 60.1 |
MsG0380014989.01.T01 | MTR_4g077210 | 40.845 | 71 | 42 | 0 | 6 | 76 | 313 | 383 | 6.42e-12 | 59.7 |
MsG0380014989.01.T01 | MTR_4g062510 | 42.623 | 61 | 35 | 0 | 3 | 63 | 320 | 380 | 9.07e-12 | 59.3 |
MsG0380014989.01.T01 | MTR_5g470730 | 35.065 | 77 | 50 | 0 | 2 | 78 | 309 | 385 | 9.79e-12 | 59.3 |
MsG0380014989.01.T01 | MTR_0181s0030 | 38.028 | 71 | 44 | 0 | 3 | 73 | 308 | 378 | 1.11e-11 | 59.3 |
MsG0380014989.01.T01 | MTR_4g094772 | 36.486 | 74 | 47 | 0 | 3 | 76 | 296 | 369 | 1.44e-11 | 58.9 |
MsG0380014989.01.T01 | MTR_5g070920 | 35.526 | 76 | 49 | 0 | 2 | 77 | 308 | 383 | 1.50e-11 | 58.9 |
MsG0380014989.01.T01 | MTR_6g008620 | 44.156 | 77 | 42 | 1 | 3 | 78 | 330 | 406 | 2.06e-11 | 58.5 |
MsG0380014989.01.T01 | MTR_8g046240 | 34.667 | 75 | 49 | 0 | 3 | 77 | 313 | 387 | 2.22e-11 | 58.2 |
MsG0380014989.01.T01 | MTR_8g036185 | 40.984 | 61 | 36 | 0 | 3 | 63 | 316 | 376 | 2.86e-11 | 58.2 |
MsG0380014989.01.T01 | MTR_5g016440 | 34.722 | 72 | 47 | 0 | 3 | 74 | 300 | 371 | 3.27e-11 | 57.8 |
MsG0380014989.01.T01 | MTR_8g091690 | 36.232 | 69 | 43 | 1 | 2 | 70 | 296 | 363 | 3.42e-11 | 57.8 |
MsG0380014989.01.T01 | MTR_1g492820 | 37.333 | 75 | 46 | 1 | 3 | 77 | 322 | 395 | 5.56e-11 | 57.4 |
MsG0380014989.01.T01 | MTR_4g088420 | 35.135 | 74 | 48 | 0 | 3 | 76 | 37 | 110 | 5.63e-11 | 56.6 |
MsG0380014989.01.T01 | MTR_6g008650 | 40.580 | 69 | 41 | 0 | 2 | 70 | 329 | 397 | 9.24e-11 | 56.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380014989.01.T01 | AT4G39950 | 68.000 | 75 | 24 | 0 | 3 | 77 | 339 | 413 | 1.22e-31 | 115 |
MsG0380014989.01.T01 | AT4G39950 | 68.000 | 75 | 24 | 0 | 3 | 77 | 379 | 453 | 1.90e-31 | 115 |
MsG0380014989.01.T01 | AT2G22330 | 66.667 | 75 | 25 | 0 | 3 | 77 | 364 | 438 | 2.34e-31 | 114 |
MsG0380014989.01.T01 | AT2G22330 | 66.667 | 75 | 25 | 0 | 3 | 77 | 341 | 415 | 2.61e-31 | 114 |
MsG0380014989.01.T01 | AT5G05260 | 61.039 | 77 | 30 | 0 | 2 | 78 | 296 | 372 | 1.07e-29 | 109 |
MsG0380014989.01.T01 | AT5G05260 | 61.039 | 77 | 30 | 0 | 2 | 78 | 328 | 404 | 1.26e-29 | 109 |
MsG0380014989.01.T01 | AT1G79370 | 57.895 | 76 | 32 | 0 | 2 | 77 | 339 | 414 | 1.71e-25 | 98.6 |
MsG0380014989.01.T01 | AT1G16400 | 57.895 | 76 | 32 | 0 | 2 | 77 | 330 | 405 | 4.59e-25 | 97.1 |
MsG0380014989.01.T01 | AT1G58260 | 60.526 | 76 | 30 | 0 | 2 | 77 | 322 | 397 | 5.79e-25 | 97.1 |
MsG0380014989.01.T01 | AT1G16410 | 55.263 | 76 | 34 | 0 | 2 | 77 | 331 | 406 | 2.47e-24 | 94.7 |
MsG0380014989.01.T01 | AT1G16410 | 55.263 | 76 | 34 | 0 | 2 | 77 | 331 | 406 | 3.16e-24 | 94.7 |
MsG0380014989.01.T01 | AT5G07990 | 44.444 | 72 | 40 | 0 | 3 | 74 | 305 | 376 | 1.11e-16 | 73.6 |
MsG0380014989.01.T01 | AT1G01280 | 47.059 | 68 | 36 | 0 | 10 | 77 | 317 | 384 | 3.07e-16 | 72.0 |
MsG0380014989.01.T01 | AT3G20120 | 44.262 | 61 | 34 | 0 | 3 | 63 | 313 | 373 | 4.82e-16 | 71.6 |
MsG0380014989.01.T01 | AT3G20120 | 44.262 | 61 | 34 | 0 | 3 | 63 | 177 | 237 | 9.08e-16 | 70.9 |
MsG0380014989.01.T01 | AT3G20120 | 44.262 | 61 | 34 | 0 | 3 | 63 | 177 | 237 | 9.08e-16 | 70.9 |
MsG0380014989.01.T01 | AT3G20120 | 44.262 | 61 | 34 | 0 | 3 | 63 | 177 | 237 | 9.08e-16 | 70.9 |
MsG0380014989.01.T01 | AT1G66540 | 41.892 | 74 | 43 | 0 | 3 | 76 | 190 | 263 | 1.27e-15 | 70.5 |
MsG0380014989.01.T01 | AT1G66540 | 41.892 | 74 | 43 | 0 | 3 | 76 | 131 | 204 | 1.34e-15 | 70.1 |
MsG0380014989.01.T01 | AT4G37340 | 41.892 | 74 | 43 | 0 | 3 | 76 | 303 | 376 | 1.97e-15 | 70.1 |
MsG0380014989.01.T01 | AT4G12300 | 40.789 | 76 | 45 | 0 | 3 | 78 | 317 | 392 | 2.12e-15 | 69.7 |
MsG0380014989.01.T01 | AT4G37360 | 40.541 | 74 | 44 | 0 | 3 | 76 | 303 | 376 | 3.91e-15 | 68.9 |
MsG0380014989.01.T01 | AT1G74540 | 43.056 | 72 | 41 | 0 | 3 | 74 | 295 | 366 | 6.23e-15 | 68.6 |
MsG0380014989.01.T01 | AT1G28430 | 40.541 | 74 | 43 | 1 | 3 | 76 | 312 | 384 | 9.25e-15 | 68.2 |
MsG0380014989.01.T01 | AT3G20140 | 44.262 | 61 | 34 | 0 | 3 | 63 | 314 | 374 | 9.32e-15 | 68.2 |
MsG0380014989.01.T01 | AT3G32047 | 42.623 | 61 | 35 | 0 | 3 | 63 | 313 | 373 | 9.97e-15 | 67.8 |
MsG0380014989.01.T01 | AT3G28740 | 38.158 | 76 | 47 | 0 | 3 | 78 | 311 | 386 | 1.64e-14 | 67.4 |
MsG0380014989.01.T01 | AT4G22710 | 41.558 | 77 | 45 | 0 | 2 | 78 | 326 | 402 | 1.80e-14 | 67.0 |
MsG0380014989.01.T01 | AT4G22690 | 41.558 | 77 | 45 | 0 | 2 | 78 | 357 | 433 | 1.91e-14 | 67.0 |
MsG0380014989.01.T01 | AT2G42250 | 44.262 | 61 | 34 | 0 | 3 | 63 | 313 | 373 | 2.31e-14 | 67.0 |
MsG0380014989.01.T01 | AT2G27000 | 42.623 | 61 | 35 | 0 | 3 | 63 | 312 | 372 | 2.70e-14 | 66.6 |
MsG0380014989.01.T01 | AT1G74550 | 41.667 | 72 | 42 | 0 | 3 | 74 | 289 | 360 | 2.88e-14 | 66.6 |
MsG0380014989.01.T01 | AT5G42580 | 44.262 | 61 | 34 | 0 | 3 | 63 | 299 | 359 | 2.97e-14 | 66.6 |
MsG0380014989.01.T01 | AT5G35917 | 41.558 | 77 | 30 | 1 | 2 | 78 | 332 | 393 | 3.43e-14 | 66.2 |
MsG0380014989.01.T01 | AT3G20950 | 42.623 | 61 | 35 | 0 | 3 | 63 | 318 | 378 | 3.45e-14 | 66.2 |
MsG0380014989.01.T01 | AT4G15330 | 44.776 | 67 | 37 | 0 | 3 | 69 | 282 | 348 | 3.49e-14 | 66.2 |
MsG0380014989.01.T01 | AT4G15330 | 44.776 | 67 | 37 | 0 | 3 | 69 | 310 | 376 | 3.58e-14 | 66.2 |
MsG0380014989.01.T01 | AT3G20100 | 48.276 | 58 | 30 | 0 | 12 | 69 | 323 | 380 | 4.03e-14 | 66.2 |
MsG0380014989.01.T01 | AT4G15380 | 40.000 | 65 | 39 | 0 | 3 | 67 | 310 | 374 | 5.24e-14 | 65.9 |
MsG0380014989.01.T01 | AT3G61040 | 40.506 | 79 | 47 | 0 | 2 | 80 | 301 | 379 | 5.79e-14 | 65.9 |
MsG0380014989.01.T01 | AT3G61040 | 40.506 | 79 | 47 | 0 | 2 | 80 | 301 | 379 | 6.35e-14 | 65.5 |
MsG0380014989.01.T01 | AT2G40890 | 38.667 | 75 | 46 | 0 | 2 | 76 | 301 | 375 | 6.61e-14 | 65.5 |
MsG0380014989.01.T01 | AT2G45550 | 40.541 | 74 | 44 | 0 | 3 | 76 | 314 | 387 | 6.88e-14 | 65.5 |
MsG0380014989.01.T01 | AT5G36220 | 42.647 | 68 | 39 | 0 | 9 | 76 | 169 | 236 | 8.25e-14 | 65.1 |
MsG0380014989.01.T01 | AT5G47990 | 44.828 | 58 | 32 | 0 | 6 | 63 | 318 | 375 | 8.28e-14 | 65.5 |
MsG0380014989.01.T01 | AT3G20130 | 42.623 | 61 | 35 | 0 | 3 | 63 | 314 | 374 | 8.70e-14 | 65.1 |
MsG0380014989.01.T01 | AT4G12320 | 40.580 | 69 | 41 | 0 | 3 | 71 | 319 | 387 | 9.05e-14 | 65.1 |
MsG0380014989.01.T01 | AT1G50560 | 41.270 | 63 | 37 | 0 | 3 | 65 | 318 | 380 | 9.88e-14 | 65.1 |
MsG0380014989.01.T01 | AT5G36220 | 42.647 | 68 | 39 | 0 | 9 | 76 | 315 | 382 | 1.08e-13 | 65.1 |
MsG0380014989.01.T01 | AT4G15350 | 42.623 | 61 | 35 | 0 | 3 | 63 | 308 | 368 | 1.22e-13 | 64.7 |
MsG0380014989.01.T01 | AT3G20130 | 42.623 | 61 | 35 | 0 | 3 | 63 | 286 | 346 | 1.30e-13 | 64.7 |
MsG0380014989.01.T01 | AT2G45570 | 41.892 | 74 | 43 | 0 | 3 | 76 | 315 | 388 | 1.47e-13 | 64.7 |
MsG0380014989.01.T01 | AT4G37320 | 39.189 | 74 | 45 | 0 | 3 | 76 | 303 | 376 | 1.51e-13 | 64.7 |
MsG0380014989.01.T01 | AT4G37330 | 40.541 | 74 | 44 | 0 | 3 | 76 | 300 | 373 | 2.00e-13 | 64.3 |
MsG0380014989.01.T01 | AT2G14100 | 39.344 | 61 | 37 | 0 | 3 | 63 | 315 | 375 | 2.26e-13 | 63.9 |
MsG0380014989.01.T01 | AT4G37430 | 42.647 | 68 | 39 | 0 | 9 | 76 | 309 | 376 | 2.28e-13 | 63.9 |
MsG0380014989.01.T01 | AT3G20090 | 40.984 | 61 | 36 | 0 | 3 | 63 | 316 | 376 | 2.62e-13 | 63.9 |
MsG0380014989.01.T01 | AT5G06905 | 35.366 | 82 | 48 | 2 | 2 | 82 | 303 | 380 | 3.03e-13 | 63.5 |
MsG0380014989.01.T01 | AT3G20940 | 37.313 | 67 | 42 | 0 | 3 | 69 | 315 | 381 | 5.34e-13 | 63.2 |
MsG0380014989.01.T01 | AT3G20110 | 39.344 | 61 | 37 | 0 | 3 | 63 | 311 | 371 | 5.49e-13 | 62.8 |
MsG0380014989.01.T01 | AT4G12310 | 39.130 | 69 | 42 | 0 | 3 | 71 | 321 | 389 | 6.12e-13 | 62.8 |
MsG0380014989.01.T01 | AT3G20090 | 40.984 | 61 | 36 | 0 | 3 | 63 | 178 | 238 | 6.54e-13 | 62.8 |
MsG0380014989.01.T01 | AT4G37410 | 39.706 | 68 | 41 | 0 | 9 | 76 | 306 | 373 | 9.19e-13 | 62.4 |
MsG0380014989.01.T01 | AT2G27010 | 40.984 | 61 | 36 | 0 | 3 | 63 | 290 | 350 | 9.93e-13 | 62.4 |
MsG0380014989.01.T01 | AT2G05180 | 39.344 | 61 | 37 | 0 | 3 | 63 | 314 | 374 | 1.07e-12 | 62.0 |
MsG0380014989.01.T01 | AT2G23190 | 36.986 | 73 | 46 | 0 | 6 | 78 | 350 | 422 | 1.21e-12 | 62.0 |
MsG0380014989.01.T01 | AT3G20960 | 39.344 | 61 | 37 | 0 | 3 | 63 | 314 | 374 | 1.22e-12 | 62.0 |
MsG0380014989.01.T01 | AT5G06900 | 42.623 | 61 | 35 | 0 | 3 | 63 | 307 | 367 | 1.36e-12 | 62.0 |
MsG0380014989.01.T01 | AT3G20960 | 39.344 | 61 | 37 | 0 | 3 | 63 | 211 | 271 | 1.85e-12 | 61.6 |
MsG0380014989.01.T01 | AT3G20080 | 34.884 | 86 | 42 | 1 | 3 | 74 | 178 | 263 | 3.11e-12 | 60.8 |
MsG0380014989.01.T01 | AT3G20080 | 34.884 | 86 | 42 | 1 | 3 | 74 | 178 | 263 | 3.11e-12 | 60.8 |
MsG0380014989.01.T01 | AT3G20080 | 34.884 | 86 | 42 | 1 | 3 | 74 | 178 | 263 | 3.11e-12 | 60.8 |
MsG0380014989.01.T01 | AT3G20080 | 34.884 | 86 | 42 | 1 | 3 | 74 | 178 | 263 | 3.11e-12 | 60.8 |
MsG0380014989.01.T01 | AT3G20080 | 36.709 | 79 | 36 | 1 | 10 | 74 | 322 | 400 | 4.70e-12 | 60.5 |
MsG0380014989.01.T01 | AT3G20080 | 36.709 | 79 | 36 | 1 | 10 | 74 | 322 | 400 | 4.70e-12 | 60.5 |
MsG0380014989.01.T01 | AT1G33720 | 41.538 | 65 | 38 | 0 | 3 | 67 | 182 | 246 | 4.84e-12 | 60.1 |
MsG0380014989.01.T01 | AT1G33720 | 41.538 | 65 | 38 | 0 | 3 | 67 | 182 | 246 | 4.84e-12 | 60.1 |
MsG0380014989.01.T01 | AT1G33720 | 41.538 | 65 | 38 | 0 | 3 | 67 | 182 | 246 | 4.84e-12 | 60.1 |
MsG0380014989.01.T01 | AT1G33720 | 41.538 | 65 | 38 | 0 | 3 | 67 | 207 | 271 | 5.03e-12 | 60.1 |
MsG0380014989.01.T01 | AT2G45560 | 36.486 | 74 | 47 | 0 | 3 | 76 | 314 | 387 | 5.22e-12 | 60.1 |
MsG0380014989.01.T01 | AT1G33720 | 41.538 | 65 | 38 | 0 | 3 | 67 | 314 | 378 | 5.48e-12 | 60.1 |
MsG0380014989.01.T01 | AT3G20935 | 35.821 | 67 | 43 | 0 | 3 | 69 | 140 | 206 | 8.33e-12 | 59.7 |
MsG0380014989.01.T01 | AT5G44620 | 32.895 | 76 | 51 | 0 | 3 | 78 | 321 | 396 | 1.13e-11 | 59.3 |
MsG0380014989.01.T01 | AT4G37370 | 37.838 | 74 | 46 | 0 | 3 | 76 | 302 | 375 | 1.14e-11 | 59.3 |
MsG0380014989.01.T01 | AT5G04630 | 36.000 | 75 | 48 | 0 | 3 | 77 | 314 | 388 | 2.54e-11 | 58.2 |
MsG0380014989.01.T01 | AT4G12330 | 32.895 | 76 | 51 | 0 | 3 | 78 | 320 | 395 | 3.27e-11 | 57.8 |
MsG0380014989.01.T01 | AT4G36220 | 43.103 | 58 | 33 | 0 | 6 | 63 | 325 | 382 | 3.57e-11 | 57.8 |
MsG0380014989.01.T01 | AT2G23220 | 38.571 | 70 | 43 | 0 | 9 | 78 | 324 | 393 | 5.33e-11 | 57.4 |
MsG0380014989.01.T01 | AT1G33730 | 36.486 | 74 | 47 | 0 | 3 | 76 | 178 | 251 | 6.83e-11 | 57.0 |
MsG0380014989.01.T01 | AT1G33730 | 36.486 | 74 | 47 | 0 | 3 | 76 | 178 | 251 | 6.83e-11 | 57.0 |
MsG0380014989.01.T01 | AT4G15360 | 37.705 | 61 | 38 | 0 | 3 | 63 | 314 | 374 | 7.51e-11 | 57.0 |
Find 20 sgRNAs with CRISPR-Local
Find 20 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAATTCTTCTGTGGCTTT+TGG | 0.209981 | 3:-63671515 | None:intergenic |
GTTTAGGAATATCTGATTCT+TGG | 0.271659 | 3:-63671565 | None:intergenic |
TCCAAAAGCCACAGAAGAAT+TGG | 0.337259 | 3:+63671514 | MsG0380014989.01.T01:CDS |
TCCTAAACTAAACTTCTTGA+TGG | 0.355919 | 3:+63671580 | MsG0380014989.01.T01:CDS |
GGAACATTGAAAGCCGTTAT+AGG | 0.370992 | 3:-63671632 | None:intergenic |
GCCATCAAGAAGTTTAGTTT+AGG | 0.379093 | 3:-63671581 | None:intergenic |
GAAGAATTGGACAATATTGT+TGG | 0.396293 | 3:+63671527 | MsG0380014989.01.T01:CDS |
TTTCTGCCTGCATCCTATAA+CGG | 0.456317 | 3:+63671619 | MsG0380014989.01.T01:CDS |
ATCCATCCAATGCTGTTGAA+TGG | 0.482314 | 3:+63671456 | MsG0380014989.01.T01:CDS |
TGAAATTACTTGATACCAAA+GGG | 0.497307 | 3:+63671684 | MsG0380014989.01.T01:CDS |
AATATTGTCCAATTCTTCTG+TGG | 0.519661 | 3:-63671522 | None:intergenic |
AGCAATACATGACTACCCTT+TGG | 0.519982 | 3:-63671699 | None:intergenic |
GTCCATTCAACAGCATTGGA+TGG | 0.522990 | 3:-63671458 | None:intergenic |
TGAAAGCCGTTATAGGATGC+AGG | 0.530087 | 3:-63671625 | None:intergenic |
TTGAAATTACTTGATACCAA+AGG | 0.533984 | 3:+63671683 | MsG0380014989.01.T01:CDS |
TAATGTCCATTCAACAGCAT+TGG | 0.554450 | 3:-63671462 | None:intergenic |
TATTGTTGGAAAAGATAGAC+TGG | 0.561753 | 3:+63671541 | MsG0380014989.01.T01:CDS |
TGTATCATTCGTAGAGACAT+GGG | 0.564941 | 3:-63671654 | None:intergenic |
TTGTATCATTCGTAGAGACA+TGG | 0.592919 | 3:-63671655 | None:intergenic |
GTATCATTCGTAGAGACATG+GGG | 0.704429 | 3:-63671653 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TGAAATTACTTGATACCAAA+GGG | + | Chr3:63671684-63671703 | MsG0380014989.01.T01:CDS | 25.0% |
! | TTGAAATTACTTGATACCAA+AGG | + | Chr3:63671683-63671702 | MsG0380014989.01.T01:CDS | 25.0% |
AATATTGTCCAATTCTTCTG+TGG | - | Chr3:63671525-63671544 | None:intergenic | 30.0% | |
GAAGAATTGGACAATATTGT+TGG | + | Chr3:63671527-63671546 | MsG0380014989.01.T01:CDS | 30.0% | |
GTTTAGGAATATCTGATTCT+TGG | - | Chr3:63671568-63671587 | None:intergenic | 30.0% | |
TATTGTTGGAAAAGATAGAC+TGG | + | Chr3:63671541-63671560 | MsG0380014989.01.T01:CDS | 30.0% | |
TCCTAAACTAAACTTCTTGA+TGG | + | Chr3:63671580-63671599 | MsG0380014989.01.T01:CDS | 30.0% | |
TAATGTCCATTCAACAGCAT+TGG | - | Chr3:63671465-63671484 | None:intergenic | 35.0% | |
TGTATCATTCGTAGAGACAT+GGG | - | Chr3:63671657-63671676 | None:intergenic | 35.0% | |
TTGTATCATTCGTAGAGACA+TGG | - | Chr3:63671658-63671677 | None:intergenic | 35.0% | |
! | GCCATCAAGAAGTTTAGTTT+AGG | - | Chr3:63671584-63671603 | None:intergenic | 35.0% |
ATCCATCCAATGCTGTTGAA+TGG | + | Chr3:63671456-63671475 | MsG0380014989.01.T01:CDS | 40.0% | |
GGAACATTGAAAGCCGTTAT+AGG | - | Chr3:63671635-63671654 | None:intergenic | 40.0% | |
GTATCATTCGTAGAGACATG+GGG | - | Chr3:63671656-63671675 | None:intergenic | 40.0% | |
TCCAAAAGCCACAGAAGAAT+TGG | + | Chr3:63671514-63671533 | MsG0380014989.01.T01:CDS | 40.0% | |
TTTCTGCCTGCATCCTATAA+CGG | + | Chr3:63671619-63671638 | MsG0380014989.01.T01:CDS | 40.0% | |
! | TCCAATTCTTCTGTGGCTTT+TGG | - | Chr3:63671518-63671537 | None:intergenic | 40.0% |
!! | GTGGCTTTTGGAAATAGTTC+TGG | - | Chr3:63671506-63671525 | None:intergenic | 40.0% |
TGAAAGCCGTTATAGGATGC+AGG | - | Chr3:63671628-63671647 | None:intergenic | 45.0% | |
! | GTCCATTCAACAGCATTGGA+TGG | - | Chr3:63671461-63671480 | None:intergenic | 45.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 63671446 | 63671709 | 63671446 | ID=MsG0380014989.01;Name=MsG0380014989.01 |
Chr3 | mRNA | 63671446 | 63671709 | 63671446 | ID=MsG0380014989.01.T01;Parent=MsG0380014989.01;Name=MsG0380014989.01.T01;_AED=0.29;_eAED=0.30;_QI=0|-1|0|1|-1|0|1|0|87 |
Chr3 | exon | 63671446 | 63671709 | 63671446 | ID=MsG0380014989.01.T01:exon:29781;Parent=MsG0380014989.01.T01 |
Chr3 | CDS | 63671446 | 63671709 | 63671446 | ID=MsG0380014989.01.T01:cds;Parent=MsG0380014989.01.T01 |
Gene Sequence |
Protein sequence |