AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015144.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015144.01.T01 MTR_3g063950 71.006 338 79 4 1 331 1 326 3.15e-141 402
MsG0380015144.01.T01 MTR_3g063940 61.765 340 108 6 1 329 1 329 4.63e-115 336
MsG0380015144.01.T01 MTR_3g063940 56.089 271 95 5 1 259 1 259 2.67e-75 233
MsG0380015144.01.T01 MTR_7g114660 44.545 330 127 7 15 324 94 387 7.56e-61 199
MsG0380015144.01.T01 MTR_8g465010 43.860 342 127 10 5 324 84 382 1.00e-55 186
MsG0380015144.01.T01 MTR_8g031500 60.870 69 26 1 256 324 275 342 1.25e-16 80.1
MsG0380015144.01.T01 MTR_8g031500 52.174 69 25 2 123 184 219 286 5.58e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015144.01.T01 AT1G54520 38.938 339 154 8 5 324 84 388 1.52e-48 167

Find 70 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTCCCCTATTATCAAAA+TGG 0.188351 3:-65846980 None:intergenic
TTCAGGCTGGGGAGGTATTA+TGG 0.228594 3:-65842718 MsG0380015144.01.T01:intron
ACTTGTACTTGGTGTCATTT+TGG 0.237747 3:-65846656 MsG0380015144.01.T01:CDS
GTTGTTTAAGGTTGGAATTT+TGG 0.271714 3:-65846431 MsG0380015144.01.T01:intron
CTTTGCAGGTGGATCTTAAA+AGG 0.280869 3:-65844730 MsG0380015144.01.T01:intron
AACTCAGTTTCAGCCTCTTC+AGG 0.293081 3:-65846883 MsG0380015144.01.T01:CDS
TTCTTCTTGGTACTTGTACT+TGG 0.329332 3:-65846667 MsG0380015144.01.T01:CDS
GAAGGGAGCTGAATATTTAA+AGG 0.344002 3:-65842888 MsG0380015144.01.T01:CDS
TATTCAGCTCCCTTCATGTT+AGG 0.362444 3:+65842896 None:intergenic
CCCTTTCTTCAATTGATAGT+TGG 0.380058 3:+65844678 None:intergenic
CTTATGTTAGGTAACAATAT+TGG 0.386874 3:-65842945 MsG0380015144.01.T01:intron
AGTTACTGTGCTCAAGCTTC+AGG 0.387740 3:-65846599 MsG0380015144.01.T01:intron
TTCTCCCCTATTATCAAAAT+GGG 0.391957 3:-65846979 None:intergenic
AGCATGTTTCTCCACCCTCC+TGG 0.401006 3:+65844705 None:intergenic
CAAAGATCAATTCAATTGCT+AGG 0.416142 3:+65842565 None:intergenic
TAAACAGCTCACACCTTCCT+TGG 0.423872 3:+65846345 None:intergenic
GGGTTTCATCCTCTCTCTGT+GGG 0.434025 3:+65842693 None:intergenic
GCCTCTTCAGGAGGTGTCAT+GGG 0.436835 3:-65846871 MsG0380015144.01.T01:CDS
AAGAGGCTGAAACTGAGTTC+AGG 0.437389 3:+65846887 None:intergenic
ATTCAAGTTCTCGACATGTA+AGG 0.451638 3:-65846765 MsG0380015144.01.T01:CDS
ACCAACTATCAATTGAAGAA+AGG 0.462903 3:-65844679 MsG0380015144.01.T01:CDS
AGCCTCTTCAGGAGGTGTCA+TGG 0.462952 3:-65846872 MsG0380015144.01.T01:CDS
GAAACTTGAGGATGAGGATG+AGG 0.467659 3:+65846819 None:intergenic
CCAACTATCAATTGAAGAAA+GGG 0.475889 3:-65844678 MsG0380015144.01.T01:CDS
ATGAAATATGAATAAACAAG+TGG 0.483886 3:-65842623 MsG0380015144.01.T01:exon
ACTTGAATACCTTGTGGATG+AGG 0.484874 3:+65846780 None:intergenic
CATCATCGTTACTGTATAGC+AGG 0.490864 3:-65844851 MsG0380015144.01.T01:CDS
AAAGATCAATTCAATTGCTA+GGG 0.500110 3:+65842566 None:intergenic
ACAATATTGGTAGCTACTAA+AGG 0.524012 3:-65842932 MsG0380015144.01.T01:CDS
CATGTAAGGGCACAACATCA+TGG 0.525179 3:-65846751 MsG0380015144.01.T01:CDS
CAATTCAAAGGGATCTGACT+AGG 0.526381 3:-65846393 MsG0380015144.01.T01:CDS
GAATGATACCGCTCATGGTA+AGG 0.529020 3:-65846728 MsG0380015144.01.T01:CDS
GGATGGGATGTACAATTCAA+AGG 0.534833 3:-65846405 MsG0380015144.01.T01:CDS
TTCATAGACTTAGCTAGCTG+AGG 0.537869 3:+65842641 None:intergenic
ACAGCTCACACCTTCCTTGG+AGG 0.537908 3:+65846348 None:intergenic
GAGGATGAAACCCTTTCAGA+TGG 0.539392 3:-65842683 MsG0380015144.01.T01:CDS
TCCCATGACACCTCCTGAAG+AGG 0.540118 3:+65846870 None:intergenic
ACTGAAGAAACTTGAGGATG+AGG 0.542158 3:+65846813 None:intergenic
TTTGCACTGAGCTGCGGACA+AGG 0.544166 3:-65842354 MsG0380015144.01.T01:intron
ACATAAGCTACCTAACATGA+AGG 0.544792 3:-65842906 MsG0380015144.01.T01:CDS
TGCTAAACCGATCATAACTC+TGG 0.546715 3:+65844594 None:intergenic
TTGTTCTTTGCACTGAGCTG+CGG 0.547007 3:-65842360 MsG0380015144.01.T01:intron
GAAATTCTTTCAGGCTGGGG+AGG 0.552461 3:-65842726 MsG0380015144.01.T01:intron
GGTGGATCTTAAAAGGAGCC+AGG 0.555856 3:-65844723 MsG0380015144.01.T01:CDS
GATGGGATGTACAATTCAAA+GGG 0.559417 3:-65846404 MsG0380015144.01.T01:CDS
TCATAGACTTAGCTAGCTGA+GGG 0.559467 3:+65842642 None:intergenic
TTCAAGTTCTCGACATGTAA+GGG 0.567486 3:-65846764 MsG0380015144.01.T01:CDS
AGGGTTTCATCCTCTCTCTG+TGG 0.571271 3:+65842692 None:intergenic
ATGTAAGGGCACAACATCAT+GGG 0.583859 3:-65846750 MsG0380015144.01.T01:CDS
ATCTGAACTGAAGAAACTTG+AGG 0.585293 3:+65846807 None:intergenic
TGAAATATGAATAAACAAGT+GGG 0.593094 3:-65842622 MsG0380015144.01.T01:exon
AGCTGCTAACACATCCTCCA+AGG 0.594189 3:-65846362 MsG0380015144.01.T01:CDS
CATGGGAATGATACCGCTCA+TGG 0.594539 3:-65846733 MsG0380015144.01.T01:CDS
TCAGTTTCAGCCTCTTCAGG+AGG 0.594687 3:-65846880 MsG0380015144.01.T01:CDS
CAGATTCTTCCTCATCCACA+AGG 0.598144 3:-65846789 MsG0380015144.01.T01:CDS
ATTATGGACCCCACAGAGAG+AGG 0.599355 3:-65842702 MsG0380015144.01.T01:CDS
GATCTTAAAAGGAGCCAGGA+GGG 0.605501 3:-65844719 MsG0380015144.01.T01:CDS
GTTTAGCAATGAATATTCCA+CGG 0.610272 3:-65844579 MsG0380015144.01.T01:intron
ATAAACAAGTGGGTGATGCT+TGG 0.618412 3:-65842612 MsG0380015144.01.T01:exon
CTTAAAAGGAGCCAGGAGGG+TGG 0.619800 3:-65844716 MsG0380015144.01.T01:CDS
TAAGAAGCCAGAGTTATGAT+CGG 0.619942 3:-65844601 MsG0380015144.01.T01:CDS
GCTAACACATCCTCCAAGGA+AGG 0.620009 3:-65846358 MsG0380015144.01.T01:intron
CATAAGCTACCTAACATGAA+GGG 0.636560 3:-65842905 MsG0380015144.01.T01:CDS
TCTTCAGGAGGTGTCATGGG+AGG 0.650318 3:-65846868 MsG0380015144.01.T01:CDS
GGTTTCATCCTCTCTCTGTG+GGG 0.650477 3:+65842694 None:intergenic
TCGAGAACTTGAATACCTTG+TGG 0.680648 3:+65846774 None:intergenic
ACTTGCAACCTTACCATGAG+CGG 0.690100 3:+65846720 None:intergenic
GGATCTTAAAAGGAGCCAGG+AGG 0.690908 3:-65844720 MsG0380015144.01.T01:CDS
GTTCGACAACAAGTACATAG+TGG 0.695714 3:-65843966 MsG0380015144.01.T01:intron
GTGATGATGAAATTGAAACA+TGG 0.717936 3:-65846699 MsG0380015144.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTACTAAAAAAATTTAAAA+TGG + Chr3:65845725-65845744 None:intergenic 10.0%
!!! CTTATATTTTAACATATTTT+TGG - Chr3:65846199-65846218 MsG0380015144.01.T01:intron 10.0%
!! AAACAAAAAACATATGTATT+TGG + Chr3:65846837-65846856 None:intergenic 15.0%
!!! AATTTTAAGTTTTCAACTAT+TGG - Chr3:65845185-65845204 MsG0380015144.01.T01:intron 15.0%
!!! ATTTTGTAAAAGCTATTAAA+GGG - Chr3:65844775-65844794 MsG0380015144.01.T01:intron 15.0%
!!! GATATAATTTACTTTTCTTT+GGG - Chr3:65845370-65845389 MsG0380015144.01.T01:intron 15.0%
!!! TATTTTGTAAAAGCTATTAA+AGG - Chr3:65844774-65844793 MsG0380015144.01.T01:intron 15.0%
!!! TGATATAATTTACTTTTCTT+TGG - Chr3:65845369-65845388 MsG0380015144.01.T01:intron 15.0%
!!! TTTCTTTTTTTCAAATTTCT+CGG + Chr3:65845313-65845332 None:intergenic 15.0%
!!! TTTTAACTCATTAAATAATG+TGG - Chr3:65843105-65843124 MsG0380015144.01.T01:intron 15.0%
!! ATGAAATATGAATAAACAAG+TGG - Chr3:65846687-65846706 MsG0380015144.01.T01:CDS 20.0%
!! GTGTTAAATTAACTTACAAT+TGG + Chr3:65844362-65844381 None:intergenic 20.0%
!! TGAAATATGAATAAACAAGT+GGG - Chr3:65846688-65846707 MsG0380015144.01.T01:CDS 20.0%
!! TTTAAATTGCAAAACACTAA+TGG - Chr3:65846922-65846941 MsG0380015144.01.T01:CDS 20.0%
!!! AGTATATTAATTTTCTGCTA+AGG + Chr3:65845907-65845926 None:intergenic 20.0%
!!! GTATATTAATTTTCTGCTAA+GGG + Chr3:65845906-65845925 None:intergenic 20.0%
!!! TAATTGGTAGTATTTATCAA+AGG + Chr3:65846120-65846139 None:intergenic 20.0%
!!! TTCAATTTCTAGTAATATGT+GGG - Chr3:65844983-65845002 MsG0380015144.01.T01:intron 20.0%
!!! TTCATTTTACACCATAAAAA+AGG + Chr3:65844090-65844109 None:intergenic 20.0%
!!! TTGTGTTTTTATCATTAACA+TGG - Chr3:65842398-65842417 MsG0380015144.01.T01:intron 20.0%
!!! TTTGATTTGTTTTTTTGAGT+TGG - Chr3:65845402-65845421 MsG0380015144.01.T01:intron 20.0%
! AAACACTTTGATATAGATTG+TGG - Chr3:65843478-65843497 MsG0380015144.01.T01:intron 25.0%
! AAAGATCAATTCAATTGCTA+GGG + Chr3:65846747-65846766 None:intergenic 25.0%
! ACACTAGACAAATTTGAATT+TGG + Chr3:65844316-65844335 None:intergenic 25.0%
! ATATACCTCATTAACTGATT+TGG + Chr3:65843081-65843100 None:intergenic 25.0%
! ATTCAAATTTGTCTAGTGTT+CGG - Chr3:65844317-65844336 MsG0380015144.01.T01:intron 25.0%
! ATTCTATATTTGGTATCAGA+GGG - Chr3:65845443-65845462 MsG0380015144.01.T01:intron 25.0%
! CAAACAAGGATAAAATACTA+TGG + Chr3:65845622-65845641 None:intergenic 25.0%
! CTTATGTTAGGTAACAATAT+TGG - Chr3:65846365-65846384 MsG0380015144.01.T01:CDS 25.0%
! GAATATAGTCAAAGTAGTAA+AGG + Chr3:65845754-65845773 None:intergenic 25.0%
! GTTTAAATATGTACTCACTT+CGG + Chr3:65846873-65846892 None:intergenic 25.0%
! TATAACCTTGAAATTCTTTC+AGG - Chr3:65846575-65846594 MsG0380015144.01.T01:intron 25.0%
! TCAAAAATTAAATCATACCG+TGG + Chr3:65844751-65844770 None:intergenic 25.0%
! TCTGATACCAAATATAGAAT+CGG + Chr3:65845443-65845462 None:intergenic 25.0%
! TCTTTGTAAAAAATAGCAGT+TGG - Chr3:65846762-65846781 MsG0380015144.01.T01:CDS 25.0%
! TGATATAGTCAAGAAAACAA+TGG + Chr3:65845568-65845587 None:intergenic 25.0%
! TGGTGTAAAATGAAAGATTT+AGG - Chr3:65844096-65844115 MsG0380015144.01.T01:intron 25.0%
! TGTTAGTCAAGTAATTTGAA+TGG + Chr3:65843257-65843276 None:intergenic 25.0%
! TTGATATCTTCCTGTAAATT+TGG - Chr3:65846311-65846330 MsG0380015144.01.T01:intron 25.0%
!! AAATGAAAGATTTAGGATTC+TGG - Chr3:65844103-65844122 MsG0380015144.01.T01:intron 25.0%
!! ACAATAGTTGTTAGATTTTC+TGG + Chr3:65845959-65845978 None:intergenic 25.0%
!! ACTATTCATGCAATATTTTC+TGG - Chr3:65845999-65846018 MsG0380015144.01.T01:intron 25.0%
!! ATATTGCCTCATATTTTGTT+TGG - Chr3:65846157-65846176 MsG0380015144.01.T01:intron 25.0%
!! ATGAGATTAAACTTTTGTCA+TGG - Chr3:65843635-65843654 MsG0380015144.01.T01:intron 25.0%
!! GCATGTTTTATAGAGTTTAA+TGG + Chr3:65844963-65844982 None:intergenic 25.0%
!! GCTTACTAATAAATTTTTGC+TGG + Chr3:65846478-65846497 None:intergenic 25.0%
!! GTCATTGTAAAACAGTTTTA+CGG + Chr3:65844931-65844950 None:intergenic 25.0%
!! TATTGCATGTGTAAAACTTT+TGG + Chr3:65843045-65843064 None:intergenic 25.0%
!! TATTTGAGATGTCTTATGTT+AGG - Chr3:65846353-65846372 MsG0380015144.01.T01:intron 25.0%
!! TTCTGGTTAATGTTGTATAT+GGG + Chr3:65845942-65845961 None:intergenic 25.0%
!! TTGTTATTGATTGCATAAAG+AGG + Chr3:65843460-65843479 None:intergenic 25.0%
!!! AAGCTTATGATTCCATTTTT+CGG - Chr3:65843876-65843895 MsG0380015144.01.T01:intron 25.0%
!!! CTTCAATTTCTAGTAATATG+TGG - Chr3:65844982-65845001 MsG0380015144.01.T01:intron 25.0%
!!! TTTCTGGTTAATGTTGTATA+TGG + Chr3:65845943-65845962 None:intergenic 25.0%
AAAAAAAGAAACTTCGCAGT+GGG - Chr3:65845322-65845341 MsG0380015144.01.T01:intron 30.0%
AACATCGCATTGTTAAAACA+TGG + Chr3:65845661-65845680 None:intergenic 30.0%
AATTGCAAAACACTAATGGA+AGG - Chr3:65846926-65846945 MsG0380015144.01.T01:CDS 30.0%
ACAGACATATAGTTATGAAG+AGG + Chr3:65843203-65843222 None:intergenic 30.0%
ACCAACTATCAATTGAAGAA+AGG - Chr3:65844631-65844650 MsG0380015144.01.T01:CDS 30.0%
AGAGGTAAGAAATAAAGGAA+GGG - Chr3:65843514-65843533 MsG0380015144.01.T01:intron 30.0%
AGGATAAAATACTATGGTGT+TGG + Chr3:65845616-65845635 None:intergenic 30.0%
ATCCTACACTTTAGATGATT+TGG - Chr3:65843554-65843573 MsG0380015144.01.T01:intron 30.0%
ATTCTATTAACTGTTTGGAC+AGG - Chr3:65843715-65843734 MsG0380015144.01.T01:intron 30.0%
ATTTAAACCCTATGAGATTG+AGG - Chr3:65846885-65846904 MsG0380015144.01.T01:CDS 30.0%
CAAAGATCAATTCAATTGCT+AGG + Chr3:65846748-65846767 None:intergenic 30.0%
CCAACTATCAATTGAAGAAA+GGG - Chr3:65844632-65844651 MsG0380015144.01.T01:CDS 30.0%
CTATAACTCAAATTGCACTT+TGG + Chr3:65844522-65844541 None:intergenic 30.0%
GAAGAAAGGGAAAAATTTGA+TGG - Chr3:65844645-65844664 MsG0380015144.01.T01:CDS 30.0%
GATTCGACAAAGTTATATGT+CGG - Chr3:65843321-65843340 MsG0380015144.01.T01:intron 30.0%
GATTCTATATTTGGTATCAG+AGG - Chr3:65845442-65845461 MsG0380015144.01.T01:intron 30.0%
GGATAAAATACTATGGTGTT+GGG + Chr3:65845615-65845634 None:intergenic 30.0%
GGTTTCATGATACTTAAGAA+GGG - Chr3:65845807-65845826 MsG0380015144.01.T01:intron 30.0%
GTAAACCTTTAACACCTATA+GGG + Chr3:65844546-65844565 None:intergenic 30.0%
GTTCATTCCTTCTCTTAATT+AGG - Chr3:65844496-65844515 MsG0380015144.01.T01:intron 30.0%
GTTTAGCAATGAATATTCCA+CGG - Chr3:65844731-65844750 MsG0380015144.01.T01:intron 30.0%
TAAACCTTTAACACCTATAG+GGG + Chr3:65844545-65844564 None:intergenic 30.0%
TAGAGGTAAGAAATAAAGGA+AGG - Chr3:65843513-65843532 MsG0380015144.01.T01:intron 30.0%
TGGTTTCATGATACTTAAGA+AGG - Chr3:65845806-65845825 MsG0380015144.01.T01:intron 30.0%
TGTATTGTCTCTGTTAAGAA+AGG + Chr3:65844426-65844445 None:intergenic 30.0%
TGTATTTCCAAATGAAGGAA+AGG - Chr3:65843594-65843613 MsG0380015144.01.T01:intron 30.0%
TTAAGTATCATGAAACCACT+TGG + Chr3:65845804-65845823 None:intergenic 30.0%
TTCAAAATAACCATCCAGAA+GGG + Chr3:65844872-65844891 None:intergenic 30.0%
TTTCAAAATAACCATCCAGA+AGG + Chr3:65844873-65844892 None:intergenic 30.0%
! AAGCTACACTATGTAGTTTT+TGG - Chr3:65845487-65845506 MsG0380015144.01.T01:intron 30.0%
! AAGTAGTTTTCCATCTGAAA+GGG + Chr3:65846640-65846659 None:intergenic 30.0%
! ACAATATTGGTAGCTACTAA+AGG - Chr3:65846378-65846397 MsG0380015144.01.T01:CDS 30.0%
! AGTTTTACACATGCATCAAA+TGG + Chr3:65843138-65843157 None:intergenic 30.0%
! ATAAATTTTTGCTGGAGAGA+AGG + Chr3:65846470-65846489 None:intergenic 30.0%
! ATGATTTGGAAGACAAGAAA+TGG - Chr3:65843568-65843587 MsG0380015144.01.T01:intron 30.0%
! GTGATGATGAAATTGAAACA+TGG - Chr3:65842611-65842630 MsG0380015144.01.T01:three_prime_UTR 30.0%
! TAAACTTTTGTCATGGAGAT+GGG - Chr3:65843642-65843661 MsG0380015144.01.T01:intron 30.0%
! TAAATTTTTGCTGGAGAGAA+GGG + Chr3:65846469-65846488 None:intergenic 30.0%
! TAAGTAGTTTTCCATCTGAA+AGG + Chr3:65846641-65846660 None:intergenic 30.0%
! TAGTTTGTAGGTGTGATTTA+TGG - Chr3:65843947-65843966 MsG0380015144.01.T01:intron 30.0%
! TGATTTGGAAGACAAGAAAT+GGG - Chr3:65843569-65843588 MsG0380015144.01.T01:intron 30.0%
! TGGAATTTTCTATGCATGTT+TGG + Chr3:65845548-65845567 None:intergenic 30.0%
! TTAAACTTTTGTCATGGAGA+TGG - Chr3:65843641-65843660 MsG0380015144.01.T01:intron 30.0%
! TTAAGGTTGGAATTTTGGAT+GGG - Chr3:65842884-65842903 MsG0380015144.01.T01:CDS 30.0%
! TTCCAAATCATCTAAAGTGT+AGG + Chr3:65843559-65843578 None:intergenic 30.0%
!! ATGTCTTTTTAGAAGAGAGT+TGG + Chr3:65845847-65845866 None:intergenic 30.0%
!! CCTCATATTTTGTTTGGATT+GGG - Chr3:65846163-65846182 MsG0380015144.01.T01:intron 30.0%
!! GTTGTTTAAGGTTGGAATTT+TGG - Chr3:65842879-65842898 MsG0380015144.01.T01:CDS 30.0%
!! GTTTTTGTGTCTGTTGTTTA+AGG - Chr3:65842867-65842886 MsG0380015144.01.T01:CDS 30.0%
!! TGATTCCATTTTTCGGATTT+AGG - Chr3:65843883-65843902 MsG0380015144.01.T01:intron 30.0%
!! TGTCTTTTTAGAAGAGAGTT+GGG + Chr3:65845846-65845865 None:intergenic 30.0%
!! TTCACTACCGATTCTATATT+TGG - Chr3:65845433-65845452 MsG0380015144.01.T01:intron 30.0%
!! TTTAAGGTTGGAATTTTGGA+TGG - Chr3:65842883-65842902 MsG0380015144.01.T01:CDS 30.0%
!!! AGCTAGTTTGTTTAGTGTTT+TGG - Chr3:65844235-65844254 MsG0380015144.01.T01:intron 30.0%
!!! ATGGTTCTTGTTTTTCTTCT+TGG - Chr3:65842630-65842649 MsG0380015144.01.T01:exon 30.0%
!!! GATGGTTATTTTGAAACTCA+TGG - Chr3:65844877-65844896 MsG0380015144.01.T01:CDS 30.0%
!!! TGTTTGCTTAGTTGTTTTTC+TGG - Chr3:65843825-65843844 MsG0380015144.01.T01:intron 30.0%
AAAACAACTAAGCAAACAGC+AGG + Chr3:65843823-65843842 None:intergenic 35.0%
AAAATCATGTTTGCTCACAG+TGG - Chr3:65845510-65845529 MsG0380015144.01.T01:intron 35.0%
AATTTGTCTAGTGTTCGGTT+TGG - Chr3:65844322-65844341 MsG0380015144.01.T01:intron 35.0%
ACATAAGCTACCTAACATGA+AGG - Chr3:65846404-65846423 MsG0380015144.01.T01:CDS 35.0%
ACTTTGGCCTAATTAAGAGA+AGG + Chr3:65844506-65844525 None:intergenic 35.0%
AGAAATAAAGGAAGGGGATT+TGG - Chr3:65843521-65843540 MsG0380015144.01.T01:intron 35.0%
AGCCATTAAAAGAGAACTGA+AGG + Chr3:65845054-65845073 None:intergenic 35.0%
AGCGTATGGTTCATTGTTAA+GGG - Chr3:65846050-65846069 MsG0380015144.01.T01:intron 35.0%
ATCTGAACTGAAGAAACTTG+AGG + Chr3:65842506-65842525 None:intergenic 35.0%
ATGAAACCACTTGGACAATA+TGG + Chr3:65845795-65845814 None:intergenic 35.0%
ATGAGCACAAACAAGTATAG+AGG + Chr3:65842751-65842770 None:intergenic 35.0%
ATTAACTGTTTGGACAGGTA+AGG - Chr3:65843720-65843739 MsG0380015144.01.T01:intron 35.0%
CACTTTGATATAGATTGTGG+AGG - Chr3:65843481-65843500 MsG0380015144.01.T01:intron 35.0%
CATAAGCTACCTAACATGAA+GGG - Chr3:65846405-65846424 MsG0380015144.01.T01:CDS 35.0%
CCCAATCCAAACAAAATATG+AGG + Chr3:65846166-65846185 None:intergenic 35.0%
CTACATTTGAAAGCTAGTGT+AGG - Chr3:65846092-65846111 MsG0380015144.01.T01:intron 35.0%
CTGCAAAGATTGTTCATCAA+GGG + Chr3:65844568-65844587 None:intergenic 35.0%
GAAAAAAAGAAACTTCGCAG+TGG - Chr3:65845321-65845340 MsG0380015144.01.T01:intron 35.0%
GAAGGGAGCTGAATATTTAA+AGG - Chr3:65846422-65846441 MsG0380015144.01.T01:CDS 35.0%
GACATCCTAAATCCGAAAAA+TGG + Chr3:65843891-65843910 None:intergenic 35.0%
GAGGTAAGAAATAAAGGAAG+GGG - Chr3:65843515-65843534 MsG0380015144.01.T01:intron 35.0%
GATGGGATGTACAATTCAAA+GGG - Chr3:65842906-65842925 MsG0380015144.01.T01:CDS 35.0%
GCAATTTAAATGTCACTCTG+TGG + Chr3:65846912-65846931 None:intergenic 35.0%
GCCATTAAAAGAGAACTGAA+GGG + Chr3:65845053-65845072 None:intergenic 35.0%
GGAAGATATCAAAATGCAAC+AGG + Chr3:65846303-65846322 None:intergenic 35.0%
GGGATTGTATTTCCAAATGA+AGG - Chr3:65843589-65843608 MsG0380015144.01.T01:intron 35.0%
GGTAAACCTTTAACACCTAT+AGG + Chr3:65844547-65844566 None:intergenic 35.0%
GTGGGATTCTATTAACTGTT+TGG - Chr3:65843710-65843729 MsG0380015144.01.T01:intron 35.0%
TAAGAAGCCAGAGTTATGAT+CGG - Chr3:65844709-65844728 MsG0380015144.01.T01:CDS 35.0%
TAGCGTATGGTTCATTGTTA+AGG - Chr3:65846049-65846068 MsG0380015144.01.T01:intron 35.0%
TCAAAATAACCATCCAGAAG+GGG + Chr3:65844871-65844890 None:intergenic 35.0%
TGACTAACATACGATAACCA+AGG - Chr3:65843268-65843287 MsG0380015144.01.T01:intron 35.0%
TGAGGCAATATTGAACCATA+CGG + Chr3:65846148-65846167 None:intergenic 35.0%
TGGGTAGAGGTAAGAAATAA+AGG - Chr3:65843509-65843528 MsG0380015144.01.T01:intron 35.0%
TGGTTATGTGGTAGTATCTT+CGG - Chr3:65844034-65844053 MsG0380015144.01.T01:intron 35.0%
TGTAAAAGCTATTAAAGGGC+AGG - Chr3:65844779-65844798 MsG0380015144.01.T01:intron 35.0%
TGTTGCCAAATCAGTTAATG+AGG - Chr3:65843073-65843092 MsG0380015144.01.T01:intron 35.0%
TTCTTCTTGGTACTTGTACT+TGG - Chr3:65842643-65842662 MsG0380015144.01.T01:CDS 35.0%
TTGATATAGATTGTGGAGGT+GGG - Chr3:65843485-65843504 MsG0380015144.01.T01:intron 35.0%
TTTGATATAGATTGTGGAGG+TGG - Chr3:65843484-65843503 MsG0380015144.01.T01:intron 35.0%
! AAAGATTTAGGATTCTGGTG+TGG - Chr3:65844108-65844127 MsG0380015144.01.T01:intron 35.0%
! ACCCTTCAGTTCTCTTTTAA+TGG - Chr3:65845049-65845068 MsG0380015144.01.T01:intron 35.0%
! ATTCAAGTTCTCGACATGTA+AGG - Chr3:65842545-65842564 MsG0380015144.01.T01:three_prime_UTR 35.0%
! ATTTGAGTTATAGCCCCTAT+AGG - Chr3:65844529-65844548 MsG0380015144.01.T01:intron 35.0%
! CCCTTTCTTCAATTGATAGT+TGG + Chr3:65844635-65844654 None:intergenic 35.0%
! GAATCATAAGCTTTGTGTCA+GGG + Chr3:65843869-65843888 None:intergenic 35.0%
! TATCCTTGTTTGCTCAGTAA+TGG - Chr3:65845630-65845649 MsG0380015144.01.T01:intron 35.0%
! TGAAGCATTCATATAGCGTA+TGG - Chr3:65846036-65846055 MsG0380015144.01.T01:intron 35.0%
! TTCAAGTTCTCGACATGTAA+GGG - Chr3:65842546-65842565 MsG0380015144.01.T01:three_prime_UTR 35.0%
! TTGTGTCTGTTGTTTAAGGT+TGG - Chr3:65842871-65842890 MsG0380015144.01.T01:CDS 35.0%
!! AAAGGTACTGGAAAAAGTAG+TGG - Chr3:65843612-65843631 MsG0380015144.01.T01:intron 35.0%
!! GCCTCATATTTTGTTTGGAT+TGG - Chr3:65846162-65846181 MsG0380015144.01.T01:intron 35.0%
!!! ACTTGTACTTGGTGTCATTT+TGG - Chr3:65842654-65842673 MsG0380015144.01.T01:CDS 35.0%
!!! CAGTTTCAGTTTTGGTTATG+TGG - Chr3:65844022-65844041 MsG0380015144.01.T01:CDS 35.0%
AAACAGCCCAAAACAACCTA+GGG + Chr3:65844206-65844225 None:intergenic 40.0%
AAGCCTCGGGATATTCATAA+TGG - Chr3:65846234-65846253 MsG0380015144.01.T01:intron 40.0%
ACCTTGAAATTCTTTCAGGC+TGG - Chr3:65846579-65846598 MsG0380015144.01.T01:intron 40.0%
ACTGAAGAAACTTGAGGATG+AGG + Chr3:65842500-65842519 None:intergenic 40.0%
ACTTGAATACCTTGTGGATG+AGG + Chr3:65842533-65842552 None:intergenic 40.0%
ATAAACAAGTGGGTGATGCT+TGG - Chr3:65846698-65846717 MsG0380015144.01.T01:CDS 40.0%
ATAGCCCCTATAGGTGTTAA+AGG - Chr3:65844538-65844557 MsG0380015144.01.T01:intron 40.0%
ATCCGACAGAAACAAATGAG+TGG - Chr3:65845082-65845101 MsG0380015144.01.T01:intron 40.0%
ATCTGCAGAAAGCTAGTAGT+TGG + Chr3:65845264-65845283 None:intergenic 40.0%
ATGCATAGCAAGGCTAACAT+AGG - Chr3:65843394-65843413 MsG0380015144.01.T01:intron 40.0%
CAAAATAACCATCCAGAAGG+GGG + Chr3:65844870-65844889 None:intergenic 40.0%
CAATTCAAAGGGATCTGACT+AGG - Chr3:65842917-65842936 MsG0380015144.01.T01:CDS 40.0%
CATCATCGTTACTGTATAGC+AGG - Chr3:65844459-65844478 MsG0380015144.01.T01:intron 40.0%
CCTGCAAAGATTGTTCATCA+AGG + Chr3:65844569-65844588 None:intergenic 40.0%
CCTTGAAATTCTTTCAGGCT+GGG - Chr3:65846580-65846599 MsG0380015144.01.T01:intron 40.0%
CCTTGATGAACAATCTTTGC+AGG - Chr3:65844566-65844585 MsG0380015144.01.T01:intron 40.0%
CTACCAATTAGAGAACCGTA+TGG - Chr3:65846130-65846149 MsG0380015144.01.T01:intron 40.0%
CTTGAAATTCTTTCAGGCTG+GGG - Chr3:65846581-65846600 MsG0380015144.01.T01:intron 40.0%
CTTTGCAGGTGGATCTTAAA+AGG - Chr3:65844580-65844599 MsG0380015144.01.T01:CDS 40.0%
GAACCATACGGTTCTCTAAT+TGG + Chr3:65846136-65846155 None:intergenic 40.0%
GATCCATTACTGAGCAAACA+AGG + Chr3:65845636-65845655 None:intergenic 40.0%
GATGTAGAGTTATGTGCTTC+TGG - Chr3:65844154-65844173 MsG0380015144.01.T01:intron 40.0%
GGATGGGATGTACAATTCAA+AGG - Chr3:65842905-65842924 MsG0380015144.01.T01:CDS 40.0%
GGTGTAATATGGCAAAGTAG+TGG + Chr3:65844849-65844868 None:intergenic 40.0%
GGTGTGAGCTGTTTATTGAA+AGG - Chr3:65842973-65842992 MsG0380015144.01.T01:intron 40.0%
GGTGTGATTTATGGCTGATT+TGG - Chr3:65843956-65843975 MsG0380015144.01.T01:intron 40.0%
GTAAAAGGAGAGGTTGTGTT+AGG + Chr3:65843356-65843375 None:intergenic 40.0%
GTTCGACAACAAGTACATAG+TGG - Chr3:65845344-65845363 MsG0380015144.01.T01:intron 40.0%
TAAAAAAGGCAGCAGAAGAC+AGG + Chr3:65844076-65844095 None:intergenic 40.0%
TAAAAGAGAACTGAAGGGTG+AGG + Chr3:65845048-65845067 None:intergenic 40.0%
TAACAATGCGATGTTGCAAG+TGG - Chr3:65845666-65845685 MsG0380015144.01.T01:intron 40.0%
TAGCCATTATGAATATCCCG+AGG + Chr3:65846240-65846259 None:intergenic 40.0%
TATGTGGTAGTATCTTCGGA+CGG - Chr3:65844038-65844057 MsG0380015144.01.T01:intron 40.0%
TATTCAGCTCCCTTCATGTT+AGG + Chr3:65846417-65846436 None:intergenic 40.0%
TCATAGACTTAGCTAGCTGA+GGG + Chr3:65846671-65846690 None:intergenic 40.0%
TCCAGTACCTTTCCTTCATT+TGG + Chr3:65843604-65843623 None:intergenic 40.0%
TCGAGAACTTGAATACCTTG+TGG + Chr3:65842539-65842558 None:intergenic 40.0%
TGAACATCAACTCTAGCAGT+AGG + Chr3:65844134-65844153 None:intergenic 40.0%
TGATATAGATTGTGGAGGTG+GGG - Chr3:65843486-65843505 MsG0380015144.01.T01:intron 40.0%
TGATGAACAATCTTTGCAGG+TGG - Chr3:65844569-65844588 MsG0380015144.01.T01:intron 40.0%
TGCTAAACCGATCATAACTC+TGG + Chr3:65844719-65844738 None:intergenic 40.0%
TTACGGTGACATTCAATGAG+AGG + Chr3:65844914-65844933 None:intergenic 40.0%
TTCATAGACTTAGCTAGCTG+AGG + Chr3:65846672-65846691 None:intergenic 40.0%
! ATAGTGTCCCTAGGTTGTTT+TGG - Chr3:65844196-65844215 MsG0380015144.01.T01:intron 40.0%
! ATGTAAGGGCACAACATCAT+GGG - Chr3:65842560-65842579 MsG0380015144.01.T01:three_prime_UTR 40.0%
! GGAATCATAAGCTTTGTGTC+AGG + Chr3:65843870-65843889 None:intergenic 40.0%
! GTTGGAATTTTGGATGGGAT+GGG - Chr3:65842889-65842908 MsG0380015144.01.T01:CDS 40.0%
! TCCAAATGAAGGAAAGGTAC+TGG - Chr3:65843600-65843619 MsG0380015144.01.T01:intron 40.0%
! TTCACCGCAGAAACTTTTCA+CGG - Chr3:65845110-65845129 MsG0380015144.01.T01:intron 40.0%
!! GTAGCAGGTTGTTAGTTTGT+AGG - Chr3:65843935-65843954 MsG0380015144.01.T01:intron 40.0%
!! TAGTGTCCCTAGGTTGTTTT+GGG - Chr3:65844197-65844216 MsG0380015144.01.T01:intron 40.0%
!! TGCCACTCATTTGTTTCTGT+CGG + Chr3:65845087-65845106 None:intergenic 40.0%
!!! CTCTAGTTTTTGAGTGTAGC+AGG - Chr3:65843920-65843939 MsG0380015144.01.T01:intron 40.0%
!!! CTTGGTGTCATTTTGGCTAT+AGG - Chr3:65842661-65842680 MsG0380015144.01.T01:CDS 40.0%
!!! GTCTTCTGCTGCCTTTTTTA+TGG - Chr3:65844076-65844095 MsG0380015144.01.T01:intron 40.0%
AACTCAGTTTCAGCCTCTTC+AGG - Chr3:65842427-65842446 MsG0380015144.01.T01:intron 45.0%
AAGAGGCTGAAACTGAGTTC+AGG + Chr3:65842426-65842445 None:intergenic 45.0%
AAGGCTTATCCCACTAAGTG+GGG - Chr3:65843287-65843306 MsG0380015144.01.T01:intron 45.0%
ACACTGCCATATTGTCCAAG+TGG - Chr3:65845786-65845805 MsG0380015144.01.T01:intron 45.0%
ACTTGCAACCTTACCATGAG+CGG + Chr3:65842593-65842612 None:intergenic 45.0%
AGTTACTGTGCTCAAGCTTC+AGG - Chr3:65842711-65842730 MsG0380015144.01.T01:CDS 45.0%
ATAGCAAGGCTAACATAGGC+AGG - Chr3:65843398-65843417 MsG0380015144.01.T01:intron 45.0%
ATATTACACCCCCTTCTGGA+TGG - Chr3:65844859-65844878 MsG0380015144.01.T01:CDS 45.0%
ATGTGGGAACAGATCATCTC+TGG - Chr3:65844999-65845018 MsG0380015144.01.T01:intron 45.0%
ATGTTTGCTCACAGTGGTTC+TGG - Chr3:65845516-65845535 MsG0380015144.01.T01:intron 45.0%
ATTGACCCATCACACAAGCT+AGG + Chr3:65844284-65844303 None:intergenic 45.0%
CAACCAGAAAACTCTCGCTA+AGG + Chr3:65843779-65843798 None:intergenic 45.0%
CAAGGCTTATCCCACTAAGT+GGG - Chr3:65843286-65843305 MsG0380015144.01.T01:intron 45.0%
CAGATTCTTCCTCATCCACA+AGG - Chr3:65842521-65842540 MsG0380015144.01.T01:three_prime_UTR 45.0%
CCCAGCCTGAAAGAATTTCA+AGG + Chr3:65846583-65846602 None:intergenic 45.0%
CTGTGGACCTCAATCTCATA+GGG + Chr3:65846895-65846914 None:intergenic 45.0%
GAAACAGCCCAAAACAACCT+AGG + Chr3:65844207-65844226 None:intergenic 45.0%
GAAACTTGAGGATGAGGATG+AGG + Chr3:65842494-65842513 None:intergenic 45.0%
GAATGATACCGCTCATGGTA+AGG - Chr3:65842582-65842601 MsG0380015144.01.T01:three_prime_UTR 45.0%
GAGGATGAAACCCTTTCAGA+TGG - Chr3:65846627-65846646 MsG0380015144.01.T01:CDS 45.0%
GATCTTAAAAGGAGCCAGGA+GGG - Chr3:65844591-65844610 MsG0380015144.01.T01:CDS 45.0%
GGAAGGGGATTTGGCTAATT+TGG - Chr3:65843530-65843549 MsG0380015144.01.T01:intron 45.0%
GTTCATACTGCAGTGTGGTT+GGG - Chr3:65843980-65843999 MsG0380015144.01.T01:CDS 45.0%
TAAACAGCTCACACCTTCCT+TGG + Chr3:65842968-65842987 None:intergenic 45.0%
TCTGCCGTGAAAAGTTTCTG+CGG + Chr3:65845117-65845136 None:intergenic 45.0%
TCTGTGGACCTCAATCTCAT+AGG + Chr3:65846896-65846915 None:intergenic 45.0%
TGGTGCATTATAGTGTCCCT+AGG - Chr3:65844187-65844206 MsG0380015144.01.T01:intron 45.0%
TGTTCATACTGCAGTGTGGT+TGG - Chr3:65843979-65843998 MsG0380015144.01.T01:CDS 45.0%
TGTTTGGACAGGTAAGGAGT+GGG - Chr3:65843726-65843745 MsG0380015144.01.T01:intron 45.0%
TTCATACTGCAGTGTGGTTG+GGG - Chr3:65843981-65844000 MsG0380015144.01.T01:CDS 45.0%
TTGTTCTTTGCACTGAGCTG+CGG - Chr3:65846950-65846969 MsG0380015144.01.T01:CDS 45.0%
! AACTGCCTAGCTTGTGTGAT+GGG - Chr3:65844276-65844295 MsG0380015144.01.T01:intron 45.0%
! AAGTTATATGTCGGTTGCCG+AGG - Chr3:65843330-65843349 MsG0380015144.01.T01:intron 45.0%
! ACACAACCTCTCCTTTTACC+CGG - Chr3:65843357-65843376 MsG0380015144.01.T01:intron 45.0%
! AGTCCTTAGCGAGAGTTTTC+TGG - Chr3:65843773-65843792 MsG0380015144.01.T01:intron 45.0%
! ATCCAGAAGGGGGTGTAATA+TGG + Chr3:65844860-65844879 None:intergenic 45.0%
! ATCTCTGGCGAGGTTTTTAC+TGG - Chr3:65845014-65845033 MsG0380015144.01.T01:intron 45.0%
! ATGGAGATGGGTTTGAGTAG+AGG - Chr3:65843654-65843673 MsG0380015144.01.T01:intron 45.0%
! CATGTAAGGGCACAACATCA+TGG - Chr3:65842559-65842578 MsG0380015144.01.T01:three_prime_UTR 45.0%
! GGTTGGAATTTTGGATGGGA+TGG - Chr3:65842888-65842907 MsG0380015144.01.T01:CDS 45.0%
! TAACTGCCTAGCTTGTGTGA+TGG - Chr3:65844275-65844294 MsG0380015144.01.T01:intron 45.0%
! TCTCTGGCGAGGTTTTTACT+GGG - Chr3:65845015-65845034 MsG0380015144.01.T01:intron 45.0%
! TTGGTGTTCATACTGCAGTG+TGG - Chr3:65843975-65843994 MsG0380015144.01.T01:CDS 45.0%
!! TTAGCCTTGCTATGCATAGC+TGG + Chr3:65843391-65843410 None:intergenic 45.0%
AACTGCCCTGCACTAAAACG+AGG + Chr3:65844007-65844026 None:intergenic 50.0%
ACTGCCTTCTCTATGAGTGG+AGG - Chr3:65843688-65843707 MsG0380015144.01.T01:intron 50.0%
AGCTGCTAACACATCCTCCA+AGG - Chr3:65842948-65842967 MsG0380015144.01.T01:intron 50.0%
AGGGTTTCATCCTCTCTCTG+TGG + Chr3:65846621-65846640 None:intergenic 50.0%
ATAGATTGTGGAGGTGGGGT+GGG - Chr3:65843490-65843509 MsG0380015144.01.T01:intron 50.0%
ATCCCGAGGCTTCTTTCACT+TGG + Chr3:65846226-65846245 None:intergenic 50.0%
ATTATGGACCCCACAGAGAG+AGG - Chr3:65846608-65846627 MsG0380015144.01.T01:CDS 50.0%
CATGGGAATGATACCGCTCA+TGG - Chr3:65842577-65842596 MsG0380015144.01.T01:three_prime_UTR 50.0%
CCAAGGCTTATCCCACTAAG+TGG - Chr3:65843285-65843304 MsG0380015144.01.T01:intron 50.0%
CCACTTAGTGGGATAAGCCT+TGG + Chr3:65843288-65843307 None:intergenic 50.0%
CCTTCTCTATGAGTGGAGGT+GGG - Chr3:65843692-65843711 MsG0380015144.01.T01:intron 50.0%
CTCACTGCCTTCTCTATGAG+TGG - Chr3:65843685-65843704 MsG0380015144.01.T01:intron 50.0%
CTGTTTGGACAGGTAAGGAG+TGG - Chr3:65843725-65843744 MsG0380015144.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr3:65843291-65843310 MsG0380015144.01.T01:intron 50.0%
GAAATTCTTTCAGGCTGGGG+AGG - Chr3:65846584-65846603 MsG0380015144.01.T01:intron 50.0%
GAGACCAGCTATGCATAGCA+AGG - Chr3:65843384-65843403 MsG0380015144.01.T01:intron 50.0%
GCTAACACATCCTCCAAGGA+AGG - Chr3:65842952-65842971 MsG0380015144.01.T01:intron 50.0%
GGATCTTAAAAGGAGCCAGG+AGG - Chr3:65844590-65844609 MsG0380015144.01.T01:CDS 50.0%
GGGTTTCATCCTCTCTCTGT+GGG + Chr3:65846620-65846639 None:intergenic 50.0%
GGTCCAAGTGAAAGAAGCCT+CGG - Chr3:65846220-65846239 MsG0380015144.01.T01:intron 50.0%
GGTGGATCTTAAAAGGAGCC+AGG - Chr3:65844587-65844606 MsG0380015144.01.T01:CDS 50.0%
GGTTTCATCCTCTCTCTGTG+GGG + Chr3:65846619-65846638 None:intergenic 50.0%
GTCCAAGTGAAAGAAGCCTC+GGG - Chr3:65846221-65846240 MsG0380015144.01.T01:intron 50.0%
TATAGATTGTGGAGGTGGGG+TGG - Chr3:65843489-65843508 MsG0380015144.01.T01:intron 50.0%
TATAGCCGACCCCACTTAGT+GGG + Chr3:65843299-65843318 None:intergenic 50.0%
TCAGTTTCAGCCTCTTCAGG+AGG - Chr3:65842430-65842449 MsG0380015144.01.T01:intron 50.0%
TGCCATATTACACCCCCTTC+TGG - Chr3:65844855-65844874 MsG0380015144.01.T01:CDS 50.0%
! AGCTTTGTGTCAGGGTCAAC+AGG + Chr3:65843861-65843880 None:intergenic 50.0%
! CACAACCTCTCCTTTTACCC+GGG - Chr3:65843358-65843377 MsG0380015144.01.T01:intron 50.0%
! GTGCAGGGCAGTTTCAGTTT+TGG - Chr3:65844014-65844033 MsG0380015144.01.T01:CDS 50.0%
! TCTTCGGACGGCAGTTTTTG+CGG - Chr3:65844050-65844069 MsG0380015144.01.T01:intron 50.0%
!! TTCAGGCTGGGGAGGTATTA+TGG - Chr3:65846592-65846611 MsG0380015144.01.T01:intron 50.0%
ACAGCTCACACCTTCCTTGG+AGG + Chr3:65842965-65842984 None:intergenic 55.0%
AGCATGTTTCTCCACCCTCC+TGG + Chr3:65844608-65844627 None:intergenic 55.0%
AGGTAAGGAGTGGGTGAGGA+GGG - Chr3:65843735-65843754 MsG0380015144.01.T01:intron 55.0%
CCCACCTCCACTCATAGAGA+AGG + Chr3:65843695-65843714 None:intergenic 55.0%
CTATAGCCGACCCCACTTAG+TGG + Chr3:65843300-65843319 None:intergenic 55.0%
CTTAAAAGGAGCCAGGAGGG+TGG - Chr3:65844594-65844613 MsG0380015144.01.T01:CDS 55.0%
GCCTTCTCTATGAGTGGAGG+TGG - Chr3:65843691-65843710 MsG0380015144.01.T01:intron 55.0%
GGAACAGATCATCTCTGGCG+AGG - Chr3:65845004-65845023 MsG0380015144.01.T01:intron 55.0%
GGAGAGGTTGTGTTAGGCCT+CGG + Chr3:65843350-65843369 None:intergenic 55.0%
GGTTGCTGCTGTCAGTCTGT+GGG - Chr3:65843794-65843813 MsG0380015144.01.T01:intron 55.0%
GTGCTTCTGGTCTGCAGCTT+TGG - Chr3:65844167-65844186 MsG0380015144.01.T01:intron 55.0%
TCAAGCCCGGGTAAAAGGAG+AGG + Chr3:65843366-65843385 None:intergenic 55.0%
TCCCATGACACCTCCTGAAG+AGG + Chr3:65842443-65842462 None:intergenic 55.0%
TGGTCTCAAGCCCGGGTAAA+AGG + Chr3:65843371-65843390 None:intergenic 55.0%
TGGTTGCTGCTGTCAGTCTG+TGG - Chr3:65843793-65843812 MsG0380015144.01.T01:intron 55.0%
TTTGCACTGAGCTGCGGACA+AGG - Chr3:65846956-65846975 MsG0380015144.01.T01:CDS 55.0%
! CTGGCGAGGTTTTTACTGGG+TGG - Chr3:65845018-65845037 MsG0380015144.01.T01:intron 55.0%
! TGCATAGCTGGTCTCAAGCC+CGG + Chr3:65843379-65843398 None:intergenic 55.0%
!! AGCCTCTTCAGGAGGTGTCA+TGG - Chr3:65842438-65842457 MsG0380015144.01.T01:intron 55.0%
!! GAGGAGGGGTACGTTTTGGT+TGG - Chr3:65843750-65843769 MsG0380015144.01.T01:intron 55.0%
!! GCCTCTTCAGGAGGTGTCAT+GGG - Chr3:65842439-65842458 MsG0380015144.01.T01:intron 55.0%
!! TCTTCAGGAGGTGTCATGGG+AGG - Chr3:65842442-65842461 MsG0380015144.01.T01:intron 55.0%
!! TGGGGCCTCGTTTTAGTGCA+GGG - Chr3:65843999-65844018 MsG0380015144.01.T01:CDS 55.0%
!! TTGGGGCCTCGTTTTAGTGC+AGG - Chr3:65843998-65844017 MsG0380015144.01.T01:CDS 55.0%
CAGGTAAGGAGTGGGTGAGG+AGG - Chr3:65843734-65843753 MsG0380015144.01.T01:intron 60.0%
GGACAGGTAAGGAGTGGGTG+AGG - Chr3:65843731-65843750 MsG0380015144.01.T01:intron 60.0%
GGTAAGGAGTGGGTGAGGAG+GGG - Chr3:65843736-65843755 MsG0380015144.01.T01:intron 60.0%
TGCTGCTGTCAGTCTGTGGG+AGG - Chr3:65843797-65843816 MsG0380015144.01.T01:intron 60.0%
! GCATAGCTGGTCTCAAGCCC+GGG + Chr3:65843378-65843397 None:intergenic 60.0%
!! GGGTGAGGAGGGGTACGTTT+TGG - Chr3:65843746-65843765 MsG0380015144.01.T01:intron 60.0%
TGTGGAGGTGGGGTGGGTAG+AGG - Chr3:65843496-65843515 MsG0380015144.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 65842340 65846992 65842340 ID=MsG0380015144.01;Name=MsG0380015144.01
Chr3 mRNA 65842340 65846992 65842340 ID=MsG0380015144.01.T01;Parent=MsG0380015144.01;Name=MsG0380015144.01.T01;_AED=0.49;_eAED=0.49;_QI=9|0.85|0.87|1|0.85|0.75|8|203|331
Chr3 exon 65842340 65842369 65842340 ID=MsG0380015144.01.T01:exon:22872;Parent=MsG0380015144.01.T01
Chr3 exon 65842458 65842735 65842458 ID=MsG0380015144.01.T01:exon:22871;Parent=MsG0380015144.01.T01
Chr3 exon 65842841 65842957 65842841 ID=MsG0380015144.01.T01:exon:22870;Parent=MsG0380015144.01.T01
Chr3 exon 65843967 65844050 65843967 ID=MsG0380015144.01.T01:exon:22869;Parent=MsG0380015144.01.T01
Chr3 exon 65844580 65844744 65844580 ID=MsG0380015144.01.T01:exon:22868;Parent=MsG0380015144.01.T01
Chr3 exon 65844841 65844896 65844841 ID=MsG0380015144.01.T01:exon:22867;Parent=MsG0380015144.01.T01
Chr3 exon 65846359 65846443 65846359 ID=MsG0380015144.01.T01:exon:22866;Parent=MsG0380015144.01.T01
Chr3 exon 65846600 65846992 65846600 ID=MsG0380015144.01.T01:exon:22865;Parent=MsG0380015144.01.T01
Chr3 five_prime_UTR 65846984 65846992 65846984 ID=MsG0380015144.01.T01:five_prime_utr;Parent=MsG0380015144.01.T01
Chr3 CDS 65846600 65846983 65846600 ID=MsG0380015144.01.T01:cds;Parent=MsG0380015144.01.T01
Chr3 CDS 65846359 65846443 65846359 ID=MsG0380015144.01.T01:cds;Parent=MsG0380015144.01.T01
Chr3 CDS 65844841 65844896 65844841 ID=MsG0380015144.01.T01:cds;Parent=MsG0380015144.01.T01
Chr3 CDS 65844580 65844744 65844580 ID=MsG0380015144.01.T01:cds;Parent=MsG0380015144.01.T01
Chr3 CDS 65843967 65844050 65843967 ID=MsG0380015144.01.T01:cds;Parent=MsG0380015144.01.T01
Chr3 CDS 65842841 65842957 65842841 ID=MsG0380015144.01.T01:cds;Parent=MsG0380015144.01.T01
Chr3 CDS 65842631 65842735 65842631 ID=MsG0380015144.01.T01:cds;Parent=MsG0380015144.01.T01
Chr3 three_prime_UTR 65842458 65842630 65842458 ID=MsG0380015144.01.T01:three_prime_utr;Parent=MsG0380015144.01.T01
Chr3 three_prime_UTR 65842340 65842369 65842340 ID=MsG0380015144.01.T01:three_prime_utr;Parent=MsG0380015144.01.T01
Gene Sequence

>MsG0380015144.01.T01

ATGGGTTTGTCAAGAAAACATGTTACGAGTGTTATTGCGCTGTCACTGCTTGTGTTTTTATCATTAACATGGAACCTGAACTCAGTTTCAGCCTCTTCAGGAGGTGTCATGGGAGGAAGTTTCTTCAATTCAGATTCTTCTTCCTCATCCTCATCCTCAAGTTTCTTCAGTTCAGATTCTTCCTCATCCACAAGGTATTCAAGTTCTCGACATGTAAGGGCACAACATCATGGGAATGATACCGCTCATGGTAAGGTTGCAAGTGATGATGAAATTGAAACATGGTTCTTGTTTTTCTTCTTGGTACTTGTACTTGGTGTCATTTTGGCTATAGGTCTTTGTAAAGAAATCGATAAGAATACAGTTACTGTGCTCAAGCTTCAGGTTGGAATTTTGGATGGGATGGGATGTACAATTCAAAGGGATCTGACTAGGATTGCAGAAGCTGCTAACACATCCTCCAAGGAAGAGACAATACAAACTTTAGAGAAACATCATCGTTACTGTATAGCAGGATATTCGTCTGTGGATCTTAAAAGGAGCCAGGAGGGTGGAGAAACATGCTATAACCAACTATCAATTGAAGAAAGGGAAAAATTTGATGGAGAGACATTAGCTAACTTGAACAACAACAACAAGACACGTATAAGAAGCCAGAGTTATGATCGGTTTAGCAATGAATATTCCACGATTGATGTAGAAAAGAGTTCTGAAGAAACCGAGAAATTTGAAAAAAAGAAACTTCGCAGTGGGTTCGACAACAAGTACATAGTGGTAACAATATTGGTAGCTACTAAAGGAACACATAAGCTACCTAACATGAAGGGAGCTGAATATTTAAAGGAAGCTTTGCAAAAACTTACATCCCTTCTCTCCAGCAAAAATTTATTAGCTGGGGAGGTATTATGGACCCCACAGAGAGAGGATGAAACCCTTTCAGATGGAAAACTACTTAAAGATTACCCTCAGCTAGCTAAGTCTATGAAATATGAATAA
Protein sequence

>MsG0380015144.01.T01

MGLSRKHVTSVIALSLLVFLSLTWNLNSVSASSGGVMGGSFFNSDSSSSSSSSSFFSSDSSSSTRYSSSRHVRAQHHGNDTAHGKVASDDEIETWFLFFFLVLVLGVILAIGLCKEIDKNTVTVLKLQVGILDGMGCTIQRDLTRIAEAANTSSKEETIQTLEKHHRYCIAGYSSVDLKRSQEGGETCYNQLSIEEREKFDGETLANLNNNNKTRIRSQSYDRFSNEYSTIDVEKSSEETEKFEKKKLRSGFDNKYIVVTILVATKGTHKLPNMKGAEYLKEALQKLTSLLSSKNLLAGEVLWTPQREDETLSDGKLLKDYPQLAKSMKYE*