AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015148.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015148.01.T01 MTR_3g063950 73.455 275 64 3 28 295 54 326 1.05e-130 374
MsG0380015148.01.T01 MTR_3g063940 60.573 279 97 4 27 293 52 329 2.14e-104 308
MsG0380015148.01.T01 MTR_3g063940 55.981 209 79 4 27 223 52 259 6.79e-64 202
MsG0380015148.01.T01 MTR_7g114660 48.971 243 79 5 61 288 175 387 1.35e-57 190
MsG0380015148.01.T01 MTR_8g465010 48.536 239 75 6 64 288 178 382 8.63e-55 182
MsG0380015148.01.T01 MTR_8g031500 60.870 69 26 1 220 288 275 342 9.44e-17 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015148.01.T01 AT1G54520 45.794 214 79 5 82 288 205 388 3.75e-46 160

Find 64 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGTACTTGGTGTCATTT+TGG 0.237747 3:-65888743 MsG0380015148.01.T01:CDS
GTTGTTTAAGGTTGGAATTT+TGG 0.271714 3:-65888518 MsG0380015148.01.T01:intron
CTTTGCAGGTGGATCTTAAA+AGG 0.274049 3:-65886815 MsG0380015148.01.T01:intron
TTCAGGCTGGTGAGGTACTA+TGG 0.302452 3:-65884802 MsG0380015148.01.T01:intron
TTCTTCTTGGTACTTGTACT+TGG 0.329332 3:-65888754 MsG0380015148.01.T01:CDS
GAAGGGAGCTGAATATTTAA+AGG 0.344002 3:-65884972 MsG0380015148.01.T01:CDS
TATTCAGCTCCCTTCATGTT+AGG 0.362444 3:+65884980 None:intergenic
TTTAAATGTCATTCACTTTG+TGG 0.366754 3:+65884548 None:intergenic
CCCTTTCTTCAATTGATAGT+TGG 0.380058 3:+65886763 None:intergenic
CTTATGTTAGGTAACAATAT+TGG 0.386874 3:-65885029 MsG0380015148.01.T01:intron
AGTTACTGTGCTCAAGCTTC+AGG 0.387740 3:-65888686 MsG0380015148.01.T01:intron
AGCATGTTTCTCCACCCTCC+TGG 0.401006 3:+65886790 None:intergenic
TAAACAGCTCACACCTTCCT+TGG 0.423872 3:+65888432 None:intergenic
GGGTTTCATCCTCCCTCTGT+GGG 0.436463 3:+65884777 None:intergenic
ATTCAAGTTCTCGACATGTA+AGG 0.451638 3:-65888852 MsG0380015148.01.T01:CDS
ACCAACTATCAATTGAAGAA+AGG 0.462903 3:-65886764 MsG0380015148.01.T01:CDS
GAAACTTGAGGATGAGGATG+AGG 0.467659 3:+65888906 None:intergenic
CCAACTATCAATTGAAGAAA+GGG 0.475889 3:-65886763 MsG0380015148.01.T01:CDS
TTTGTGGACCTCAATTTCAC+AGG 0.482985 3:+65884564 None:intergenic
ATGAAATATGAATAAACAAG+TGG 0.483886 3:-65884707 MsG0380015148.01.T01:exon
ACTTGAATACCTTGTGGATG+AGG 0.484874 3:+65888867 None:intergenic
CATCATCGTTACTGTAAAGC+AGG 0.498679 3:-65886937 MsG0380015148.01.T01:CDS
CATGTAAGGGCACAACATCA+TGG 0.525179 3:-65888838 MsG0380015148.01.T01:CDS
CAATTCAAAGGGATCTGACT+AGG 0.526381 3:-65888480 MsG0380015148.01.T01:CDS
GAATGATACCGCTCATGGTA+AGG 0.529020 3:-65888815 MsG0380015148.01.T01:CDS
ACAATATTGGTAGCTACTAA+AGG 0.530785 3:-65885016 MsG0380015148.01.T01:CDS
GGATGGGATGTACAATTCAA+AGG 0.534833 3:-65888492 MsG0380015148.01.T01:CDS
ACAGCTCACACCTTCCTTGG+AGG 0.537908 3:+65888435 None:intergenic
AGGGTTTCATCCTCCCTCTG+TGG 0.538506 3:+65884776 None:intergenic
ACTGAAGAAACTTGAGGATG+AGG 0.542158 3:+65888900 None:intergenic
TGCTAAACCGATCATAACTC+TGG 0.546715 3:+65886679 None:intergenic
GAAATTCTTTCAGGCTGGTG+AGG 0.547725 3:-65884810 MsG0380015148.01.T01:intron
GGTGGATCTTAAAAGGAGCC+AGG 0.555856 3:-65886808 MsG0380015148.01.T01:CDS
GATGGGATGTACAATTCAAA+GGG 0.559417 3:-65888491 MsG0380015148.01.T01:CDS
GAGGATGAAACCCTTTCAGA+TGG 0.562833 3:-65884767 MsG0380015148.01.T01:CDS
TTCAAGTTCTCGACATGTAA+GGG 0.567486 3:-65888851 MsG0380015148.01.T01:CDS
ACATAAGCTACCTAACATGA+AGG 0.574557 3:-65884990 MsG0380015148.01.T01:CDS
ATGTAAGGGCACAACATCAT+GGG 0.583859 3:-65888837 MsG0380015148.01.T01:CDS
ATCTGAACTGAAGAAACTTG+AGG 0.585293 3:+65888894 None:intergenic
TCATCGACTTAGCTAGCTGA+GGG 0.590743 3:+65884726 None:intergenic
TTCATCGACTTAGCTAGCTG+AGG 0.592896 3:+65884725 None:intergenic
AGCTGCTAACACATCCTCCA+AGG 0.594189 3:-65888449 MsG0380015148.01.T01:CDS
CATGGGAATGATACCGCTCA+TGG 0.594539 3:-65888820 MsG0380015148.01.T01:CDS
CAGATTCTTCCTCATCCACA+AGG 0.598144 3:-65888876 MsG0380015148.01.T01:CDS
TGAAATATGAATAAACAAGT+GGG 0.602678 3:-65884706 MsG0380015148.01.T01:exon
GATCTTAAAAGGAGCCAGGA+GGG 0.605501 3:-65886804 MsG0380015148.01.T01:CDS
GTTTAGCAATGAATATTCCA+CGG 0.610272 3:-65886664 MsG0380015148.01.T01:intron
ATAAACAAGTGGGTGATGCT+TGG 0.618412 3:-65884696 MsG0380015148.01.T01:exon
CTTAAAAGGAGCCAGGAGGG+TGG 0.619800 3:-65886801 MsG0380015148.01.T01:CDS
TAAGAAGCCAGAGTTATGAT+CGG 0.619942 3:-65886686 MsG0380015148.01.T01:CDS
GCTAACACATCCTCCAAGGA+AGG 0.620009 3:-65888445 MsG0380015148.01.T01:intron
TTTAAAATATGTACTCACTC+CGG 0.626855 3:+65884588 None:intergenic
ACTATGGACCCCACAGAGGG+AGG 0.637734 3:-65884786 MsG0380015148.01.T01:CDS
TTGTGGACCTCAATTTCACA+GGG 0.639290 3:+65884565 None:intergenic
TCTTCAGGAGGTGTCATGGG+AGG 0.650318 3:-65888955 None:intergenic
GGTACTATGGACCCCACAGA+GGG 0.656661 3:-65884789 MsG0380015148.01.T01:CDS
CATAAGCTACCTAACATGAA+GGG 0.659099 3:-65884989 MsG0380015148.01.T01:CDS
GGTTTCATCCTCCCTCTGTG+GGG 0.661433 3:+65884778 None:intergenic
TCGAGAACTTGAATACCTTG+TGG 0.680648 3:+65888861 None:intergenic
ACTTGCAACCTTACCATGAG+CGG 0.690100 3:+65888807 None:intergenic
GGATCTTAAAAGGAGCCAGG+AGG 0.690908 3:-65886805 MsG0380015148.01.T01:CDS
GTTCGACAACAAGTACATAG+TGG 0.695714 3:-65886054 MsG0380015148.01.T01:intron
GTGATGATGAAATTGAAACA+TGG 0.717936 3:-65888786 MsG0380015148.01.T01:CDS
AGGTACTATGGACCCCACAG+AGG 0.727552 3:-65884790 MsG0380015148.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTACTAAAAAAATTAAAAA+TGG + Chr3:65887806-65887825 None:intergenic 10.0%
!!! CTTATATTTTAACATATTTT+TGG - Chr3:65888284-65888303 MsG0380015148.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTAATGTC+CGG - Chr3:65888872-65888891 MsG0380015148.01.T01:CDS 10.0%
!! GTATTAAATTTACTTACAAT+TGG + Chr3:65886446-65886465 None:intergenic 15.0%
!!! AATTTTAAGTTTTCAACTAT+TGG - Chr3:65887266-65887285 MsG0380015148.01.T01:intron 15.0%
!!! ATTTTGTAAAAGCAATTAAA+GGG - Chr3:65886859-65886878 MsG0380015148.01.T01:intron 15.0%
!!! GATATAATTTACTTTTCTTT+GGG - Chr3:65887451-65887470 MsG0380015148.01.T01:intron 15.0%
!!! TATTTTGTAAAAGCAATTAA+AGG - Chr3:65886858-65886877 MsG0380015148.01.T01:intron 15.0%
!!! TGATATAATTTACTTTTCTT+TGG - Chr3:65887450-65887469 MsG0380015148.01.T01:intron 15.0%
!!! TTTTAACTCATTAAATAATG+TGG - Chr3:65885187-65885206 MsG0380015148.01.T01:intron 15.0%
!! ATGAAATATGAATAAACAAG+TGG - Chr3:65888772-65888791 MsG0380015148.01.T01:CDS 20.0%
!! TGAAATATGAATAAACAAGT+GGG - Chr3:65888773-65888792 MsG0380015148.01.T01:CDS 20.0%
!! TTAAAAATTAAATCATACCG+TGG + Chr3:65886835-65886854 None:intergenic 20.0%
!!! AGTATTTTCATTTTCTGTTA+AGG + Chr3:65887993-65888012 None:intergenic 20.0%
!!! CTTCTTTTTTTCAAATTTCT+CGG + Chr3:65887394-65887413 None:intergenic 20.0%
!!! GTATTTTCATTTTCTGTTAA+GGG + Chr3:65887992-65888011 None:intergenic 20.0%
!!! TTCATTTTACACCATAAAAA+AGG + Chr3:65886172-65886191 None:intergenic 20.0%
!!! TTTGATTTGTTTTTTTGAGT+TGG - Chr3:65887483-65887502 MsG0380015148.01.T01:intron 20.0%
! AAACACTTTGATATAGATTG+TGG - Chr3:65885560-65885579 MsG0380015148.01.T01:intron 25.0%
! AGTAATGTATCCAAATTTAC+AGG + Chr3:65888409-65888428 None:intergenic 25.0%
! ATATACCTCATTAACTGATT+TGG + Chr3:65885163-65885182 None:intergenic 25.0%
! ATTCTATATTTGGTATCAGA+GGG - Chr3:65887524-65887543 MsG0380015148.01.T01:intron 25.0%
! CAAACAAGGATAAAATACTA+TGG + Chr3:65887703-65887722 None:intergenic 25.0%
! CTTATGTTAGGTAACAATAT+TGG - Chr3:65888450-65888469 MsG0380015148.01.T01:CDS 25.0%
! GAATATAGTCAAAGTAGTAA+AGG + Chr3:65887835-65887854 None:intergenic 25.0%
! TAATTCGTAGTATTTATCCA+AGG + Chr3:65888205-65888224 None:intergenic 25.0%
! TATAACCTTGAAATTCTTTC+AGG - Chr3:65888660-65888679 MsG0380015148.01.T01:intron 25.0%
! TCTGATACCAAATATAGAAT+CGG + Chr3:65887524-65887543 None:intergenic 25.0%
! TCTTTGTAAAAAATAGCAGT+AGG - Chr3:65888848-65888867 MsG0380015148.01.T01:CDS 25.0%
! TGGTGTAAAATGAAAGATTT+AGG - Chr3:65886178-65886197 MsG0380015148.01.T01:intron 25.0%
! TGTTAGTCAAGTAATTTGAA+TGG + Chr3:65885339-65885358 None:intergenic 25.0%
! TTGATATCTTCCTGTAAATT+TGG - Chr3:65888396-65888415 MsG0380015148.01.T01:intron 25.0%
! TTTAAATGTCATTCACTTTG+TGG + Chr3:65888934-65888953 None:intergenic 25.0%
!! AAGTTACACTATGTAGTTTT+TGG - Chr3:65887568-65887587 MsG0380015148.01.T01:intron 25.0%
!! ACTATTCATGCAATATTTTC+TGG - Chr3:65888085-65888104 MsG0380015148.01.T01:intron 25.0%
!! ATATTGCCTCATATTTTGTT+TGG - Chr3:65888242-65888261 MsG0380015148.01.T01:intron 25.0%
!! ATGAGATTAAACTTTTGTCA+TGG - Chr3:65885717-65885736 MsG0380015148.01.T01:intron 25.0%
!! ATTGATATACTTCTTGTTGT+TGG - Chr3:65886483-65886502 MsG0380015148.01.T01:intron 25.0%
!! CTTCAATTTCAAGTAATATG+CGG - Chr3:65887063-65887082 MsG0380015148.01.T01:intron 25.0%
!! GCTTACTAATAAATTTTTGC+TGG + Chr3:65888563-65888582 None:intergenic 25.0%
!! GTCATTGTAAAACAGTTTTA+CGG + Chr3:65887015-65887034 None:intergenic 25.0%
!! TATTGCATGTGTAAAACTTT+TGG + Chr3:65885127-65885146 None:intergenic 25.0%
!! TATTTGAGATGTCTTATGTT+AGG - Chr3:65888438-65888457 MsG0380015148.01.T01:intron 25.0%
!! TGATATAGTCTTGAAAACAA+CGG + Chr3:65887649-65887668 None:intergenic 25.0%
!! TTCAATTTCAAGTAATATGC+GGG - Chr3:65887064-65887083 MsG0380015148.01.T01:intron 25.0%
!! TTCTGGTTAATGTTGTATAT+GGG + Chr3:65888028-65888047 None:intergenic 25.0%
!! TTGTTATTGATTGCATAAAG+AGG + Chr3:65885542-65885561 None:intergenic 25.0%
!! TTTAAAATATGTACTCACTC+CGG + Chr3:65888894-65888913 None:intergenic 25.0%
!!! AAGCTTATGATTCCATTTTT+CGG - Chr3:65885958-65885977 MsG0380015148.01.T01:intron 25.0%
!!! ACAATTGTTGTTAGATTTTC+TGG + Chr3:65888045-65888064 None:intergenic 25.0%
!!! ATGTTTTTTTAGAAGAGAGT+TGG + Chr3:65887928-65887947 None:intergenic 25.0%
!!! TAGTTTTTGGAAAATCATGT+TGG - Chr3:65887581-65887600 MsG0380015148.01.T01:intron 25.0%
!!! TGTTTTTTTAGAAGAGAGTT+GGG + Chr3:65887927-65887946 None:intergenic 25.0%
!!! TTTCTGGTTAATGTTGTATA+TGG + Chr3:65888029-65888048 None:intergenic 25.0%
AACATCGCATTGTTAAAACA+TGG + Chr3:65887742-65887761 None:intergenic 30.0%
ACAGACATATAGTTATGAAG+AGG + Chr3:65885285-65885304 None:intergenic 30.0%
ACCAACTATCAATTGAAGAA+AGG - Chr3:65886715-65886734 MsG0380015148.01.T01:CDS 30.0%
AGAGGTAAGAAATAAAGGAA+GGG - Chr3:65885596-65885615 MsG0380015148.01.T01:intron 30.0%
AGCCATTAAAAGAGAATTGA+AGG + Chr3:65887135-65887154 None:intergenic 30.0%
ATCCTACACTTTAGATGATT+TGG - Chr3:65885636-65885655 MsG0380015148.01.T01:intron 30.0%
ATTCTATTAACTGTTTGGAC+AGG - Chr3:65885797-65885816 MsG0380015148.01.T01:intron 30.0%
CCAACTATCAATTGAAGAAA+GGG - Chr3:65886716-65886735 MsG0380015148.01.T01:CDS 30.0%
CTATAACTCAAATTGCACTT+TGG + Chr3:65886605-65886624 None:intergenic 30.0%
GAAGAAAGGGAAAAATTTGA+TGG - Chr3:65886729-65886748 MsG0380015148.01.T01:CDS 30.0%
GATTCGACAAAGTTATATGT+CGG - Chr3:65885403-65885422 MsG0380015148.01.T01:intron 30.0%
GATTCTATATTTGGTATCAG+AGG - Chr3:65887523-65887542 MsG0380015148.01.T01:intron 30.0%
GCCATTAAAAGAGAATTGAA+GGG + Chr3:65887134-65887153 None:intergenic 30.0%
GGATAAAATACTATGGTGTT+CGG + Chr3:65887696-65887715 None:intergenic 30.0%
GTTTAGCAATGAATATTCCA+CGG - Chr3:65886815-65886834 MsG0380015148.01.T01:intron 30.0%
TAGAGGTAAGAAATAAAGGA+AGG - Chr3:65885595-65885614 MsG0380015148.01.T01:intron 30.0%
TGTATTGTCTCTGTTAAGAA+AGG + Chr3:65886509-65886528 None:intergenic 30.0%
TGTATTTCCAAATGAAGGAA+AGG - Chr3:65885676-65885695 MsG0380015148.01.T01:intron 30.0%
TTCAAAATAACCATCCAGAA+GGG + Chr3:65886956-65886975 None:intergenic 30.0%
TTTCAAAATAACCATCCAGA+AGG + Chr3:65886957-65886976 None:intergenic 30.0%
! AAAGATTTAGGATTCTGATG+TGG - Chr3:65886190-65886209 MsG0380015148.01.T01:intron 30.0%
! AAGTAGTTTTCCATCTGAAA+GGG + Chr3:65888725-65888744 None:intergenic 30.0%
! ACAATATTGGTAGCTACTAA+AGG - Chr3:65888463-65888482 MsG0380015148.01.T01:CDS 30.0%
! ACCCTTCAATTCTCTTTTAA+TGG - Chr3:65887130-65887149 MsG0380015148.01.T01:intron 30.0%
! AGTTTTACACATGCATCAAA+TGG + Chr3:65885220-65885239 None:intergenic 30.0%
! ATAAATTTTTGCTGGAGAGA+AGG + Chr3:65888555-65888574 None:intergenic 30.0%
! ATGATTTGGAAGACAAGAAA+TGG - Chr3:65885650-65885669 MsG0380015148.01.T01:intron 30.0%
! GTGATGATGAAATTGAAACA+TGG - Chr3:65884693-65884712 MsG0380015148.01.T01:three_prime_UTR 30.0%
! TAAACTTTTGTCATGGAGAT+GGG - Chr3:65885724-65885743 MsG0380015148.01.T01:intron 30.0%
! TAAATTTTTGCTGGAGAGAA+GGG + Chr3:65888554-65888573 None:intergenic 30.0%
! TAAGTAGTTTTCCATCTGAA+AGG + Chr3:65888726-65888745 None:intergenic 30.0%
! TAGTTTGTAGGTGTGATTTA+TGG - Chr3:65886029-65886048 MsG0380015148.01.T01:intron 30.0%
! TGATTTGGAAGACAAGAAAT+GGG - Chr3:65885651-65885670 MsG0380015148.01.T01:intron 30.0%
! TTAAACTTTTGTCATGGAGA+TGG - Chr3:65885723-65885742 MsG0380015148.01.T01:intron 30.0%
! TTAAGGTTGGAATTTTGGAT+GGG - Chr3:65884966-65884985 MsG0380015148.01.T01:CDS 30.0%
! TTCCAAATCATCTAAAGTGT+AGG + Chr3:65885641-65885660 None:intergenic 30.0%
! TTTTAAACCCTGTGAAATTG+AGG - Chr3:65888907-65888926 MsG0380015148.01.T01:CDS 30.0%
!! CCTCATATTTTGTTTGGATT+GGG - Chr3:65888248-65888267 MsG0380015148.01.T01:intron 30.0%
!! GTTGTTTAAGGTTGGAATTT+TGG - Chr3:65884961-65884980 MsG0380015148.01.T01:CDS 30.0%
!! GTTTTTGTGTCTGTTGTTTA+AGG - Chr3:65884949-65884968 MsG0380015148.01.T01:CDS 30.0%
!! TTCACTACCGATTCTATATT+TGG - Chr3:65887514-65887533 MsG0380015148.01.T01:intron 30.0%
!! TTTAAGGTTGGAATTTTGGA+TGG - Chr3:65884965-65884984 MsG0380015148.01.T01:CDS 30.0%
!!! ATGGTTCTTGTTTTTCTTCT+TGG - Chr3:65884712-65884731 MsG0380015148.01.T01:exon 30.0%
!!! CAGTTTCAATTTTGGTTATG+TGG - Chr3:65886104-65886123 MsG0380015148.01.T01:CDS 30.0%
!!! GATGGTTATTTTGAAACTCA+TGG - Chr3:65886961-65886980 MsG0380015148.01.T01:CDS 30.0%
!!! GCTAGTTTGTTTAGTGTTTT+TGG - Chr3:65886318-65886337 MsG0380015148.01.T01:intron 30.0%
!!! TGTTTGCTTAGTTGTTTTTC+TGG - Chr3:65885907-65885926 MsG0380015148.01.T01:intron 30.0%
AAAAAAAGAAGCTTCGCAGT+GGG - Chr3:65887403-65887422 MsG0380015148.01.T01:intron 35.0%
AAAACAACTAAGCAAACAGC+AGG + Chr3:65885905-65885924 None:intergenic 35.0%
AAACTGCCCAAAACAATCTA+GGG + Chr3:65886288-65886307 None:intergenic 35.0%
AAGCCTTGGGATATTCATAA+TGG - Chr3:65888319-65888338 MsG0380015148.01.T01:intron 35.0%
AATTGCACTTTGGCCTAATT+AGG + Chr3:65886595-65886614 None:intergenic 35.0%
ACATAAGCTACCTAACATGA+AGG - Chr3:65888489-65888508 MsG0380015148.01.T01:CDS 35.0%
AGAAATAAAGGAAGGGGATT+TGG - Chr3:65885603-65885622 MsG0380015148.01.T01:intron 35.0%
ATCTGAACTGAAGAAACTTG+AGG + Chr3:65884588-65884607 None:intergenic 35.0%
ATGAGCACAAACAAGTATAG+AGG + Chr3:65884833-65884852 None:intergenic 35.0%
ATTAACTGTTTGGACAGGTA+AGG - Chr3:65885802-65885821 MsG0380015148.01.T01:intron 35.0%
CACTTTGATATAGATTGTGG+AGG - Chr3:65885563-65885582 MsG0380015148.01.T01:intron 35.0%
CATAAGCTACCTAACATGAA+GGG - Chr3:65888490-65888509 MsG0380015148.01.T01:CDS 35.0%
CCCAATCCAAACAAAATATG+AGG + Chr3:65888251-65888270 None:intergenic 35.0%
CTACGAATTAGAGAACCATA+TGG - Chr3:65888215-65888234 MsG0380015148.01.T01:intron 35.0%
GAAGGGAGCTGAATATTTAA+AGG - Chr3:65888507-65888526 MsG0380015148.01.T01:CDS 35.0%
GAGGTAAGAAATAAAGGAAG+GGG - Chr3:65885597-65885616 MsG0380015148.01.T01:intron 35.0%
GATGGGATGTACAATTCAAA+GGG - Chr3:65884988-65885007 MsG0380015148.01.T01:CDS 35.0%
GGAAGATATCAAAATGCAAC+AGG + Chr3:65888388-65888407 None:intergenic 35.0%
GGGATTGTATTTCCAAATGA+AGG - Chr3:65885671-65885690 MsG0380015148.01.T01:intron 35.0%
GGTCTCATGATACTTAAGAA+GGG - Chr3:65887888-65887907 MsG0380015148.01.T01:intron 35.0%
GTGGGATTCTATTAACTGTT+TGG - Chr3:65885792-65885811 MsG0380015148.01.T01:intron 35.0%
GTTCATTCCTTGTCCTAATT+AGG - Chr3:65886579-65886598 MsG0380015148.01.T01:intron 35.0%
TAAAAGAGAATTGAAGGGTG+AGG + Chr3:65887129-65887148 None:intergenic 35.0%
TAACCCCTTTAACACCTATA+GGG + Chr3:65886629-65886648 None:intergenic 35.0%
TAAGAAGCCAGAGTTATGAT+CGG - Chr3:65886793-65886812 MsG0380015148.01.T01:CDS 35.0%
TACCAATTCTGAATTCGTCT+CGG - Chr3:65886394-65886413 MsG0380015148.01.T01:intron 35.0%
TCAAAATAACCATCCAGAAG+GGG + Chr3:65886955-65886974 None:intergenic 35.0%
TCAATTAAGAGAGATTGCAG+TGG + Chr3:65886468-65886487 None:intergenic 35.0%
TGACTAACATACGATAACCA+AGG - Chr3:65885350-65885369 MsG0380015148.01.T01:intron 35.0%
TGAGGCAATATTGAACCATA+TGG + Chr3:65888233-65888252 None:intergenic 35.0%
TGGGTAGAGGTAAGAAATAA+AGG - Chr3:65885591-65885610 MsG0380015148.01.T01:intron 35.0%
TGGTCTCATGATACTTAAGA+AGG - Chr3:65887887-65887906 MsG0380015148.01.T01:intron 35.0%
TGGTTATGTGGTAGTATCTT+CGG - Chr3:65886116-65886135 MsG0380015148.01.T01:CDS 35.0%
TGTAAAAGCAATTAAAGGGC+AGG - Chr3:65886863-65886882 MsG0380015148.01.T01:intron 35.0%
TGTTGCCAAATCAGTTAATG+AGG - Chr3:65885155-65885174 MsG0380015148.01.T01:intron 35.0%
TTAAGTATCATGAGACCACT+TGG + Chr3:65887885-65887904 None:intergenic 35.0%
TTCTTCTTGGTACTTGTACT+TGG - Chr3:65884725-65884744 MsG0380015148.01.T01:CDS 35.0%
TTGATATAGATTGTGGAGGT+GGG - Chr3:65885567-65885586 MsG0380015148.01.T01:intron 35.0%
TTTGATATAGATTGTGGAGG+TGG - Chr3:65885566-65885585 MsG0380015148.01.T01:intron 35.0%
! ATTCAAGTTCTCGACATGTA+AGG - Chr3:65884627-65884646 MsG0380015148.01.T01:three_prime_UTR 35.0%
! ATTTGAGTTATAGCCCCTAT+AGG - Chr3:65886612-65886631 MsG0380015148.01.T01:intron 35.0%
! CCCTTTCTTCAATTGATAGT+TGG + Chr3:65886719-65886738 None:intergenic 35.0%
! CGGAATTTTCTATGCATGTT+TGG + Chr3:65887629-65887648 None:intergenic 35.0%
! CTGCAAAGTTTGTTCATCAA+GGG + Chr3:65886652-65886671 None:intergenic 35.0%
! GAATCATAAGCTTTGTGTCA+GGG + Chr3:65885951-65885970 None:intergenic 35.0%
! TAGTGTCCCTAGATTGTTTT+GGG - Chr3:65886279-65886298 MsG0380015148.01.T01:intron 35.0%
! TATCCTTGTTTGCTCAGTAA+TGG - Chr3:65887711-65887730 MsG0380015148.01.T01:intron 35.0%
! TGAAGCATTCATATAGCGTA+TGG - Chr3:65888122-65888141 MsG0380015148.01.T01:intron 35.0%
! TTCAAGTTCTCGACATGTAA+GGG - Chr3:65884628-65884647 MsG0380015148.01.T01:three_prime_UTR 35.0%
! TTGTGTCTGTTGTTTAAGGT+TGG - Chr3:65884953-65884972 MsG0380015148.01.T01:CDS 35.0%
!! AAAGGTACTGGAAAAAGTAG+TGG - Chr3:65885694-65885713 MsG0380015148.01.T01:intron 35.0%
!! GCCTCATATTTTGTTTGGAT+TGG - Chr3:65888247-65888266 MsG0380015148.01.T01:intron 35.0%
!! TGATTCCATTTTTCGGATGT+AGG - Chr3:65885965-65885984 MsG0380015148.01.T01:intron 35.0%
!!! ACTTGTACTTGGTGTCATTT+TGG - Chr3:65884736-65884755 MsG0380015148.01.T01:CDS 35.0%
AACCCCTTTAACACCTATAG+GGG + Chr3:65886628-65886647 None:intergenic 40.0%
ACCAATTCTGAATTCGTCTC+GGG - Chr3:65886395-65886414 MsG0380015148.01.T01:intron 40.0%
ACCAGCCTGAAAGAATTTCA+AGG + Chr3:65888668-65888687 None:intergenic 40.0%
ACCTTGAAATTCTTTCAGGC+TGG - Chr3:65888664-65888683 MsG0380015148.01.T01:intron 40.0%
ACTGAAGAAACTTGAGGATG+AGG + Chr3:65884582-65884601 None:intergenic 40.0%
ACTTGAATACCTTGTGGATG+AGG + Chr3:65884615-65884634 None:intergenic 40.0%
ACTTTGGCCTAATTAGGACA+AGG + Chr3:65886589-65886608 None:intergenic 40.0%
AGCGTATGGTTCGTTGTTAA+GGG - Chr3:65888136-65888155 MsG0380015148.01.T01:intron 40.0%
ATAAACAAGTGGGTGATGCT+TGG - Chr3:65888783-65888802 MsG0380015148.01.T01:CDS 40.0%
ATAGCCCCTATAGGTGTTAA+AGG - Chr3:65886621-65886640 MsG0380015148.01.T01:intron 40.0%
ATCCGACAGAAACAAATGAG+TGG - Chr3:65887163-65887182 MsG0380015148.01.T01:intron 40.0%
ATCTGCAGAAAGCTAGTAGT+TGG + Chr3:65887345-65887364 None:intergenic 40.0%
ATGAGACCACTTGGACAATA+TGG + Chr3:65887876-65887895 None:intergenic 40.0%
ATGCATAGCAAGGCTAACAT+AGG - Chr3:65885476-65885495 MsG0380015148.01.T01:intron 40.0%
CAAAATAACCATCCAGAAGG+GGG + Chr3:65886954-65886973 None:intergenic 40.0%
CAATTCAAAGGGATCTGACT+AGG - Chr3:65884999-65885018 MsG0380015148.01.T01:CDS 40.0%
CAGCCATTATGAATATCCCA+AGG + Chr3:65888325-65888344 None:intergenic 40.0%
CATCATCGTTACTGTAAAGC+AGG - Chr3:65886542-65886561 MsG0380015148.01.T01:intron 40.0%
CCTTGATGAACAAACTTTGC+AGG - Chr3:65886650-65886669 MsG0380015148.01.T01:intron 40.0%
CTTTGCAGGTGGATCTTAAA+AGG - Chr3:65886664-65886683 MsG0380015148.01.T01:intron 40.0%
GAAAAAAAGAAGCTTCGCAG+TGG - Chr3:65887402-65887421 MsG0380015148.01.T01:intron 40.0%
GAAACTGCCCAAAACAATCT+AGG + Chr3:65886289-65886308 None:intergenic 40.0%
GACATCCTACATCCGAAAAA+TGG + Chr3:65885973-65885992 None:intergenic 40.0%
GATCCATTACTGAGCAAACA+AGG + Chr3:65887717-65887736 None:intergenic 40.0%
GGATGGGATGTACAATTCAA+AGG - Chr3:65884987-65885006 MsG0380015148.01.T01:CDS 40.0%
GGTGTAATATGGCAAAGTAG+TGG + Chr3:65886933-65886952 None:intergenic 40.0%
GGTGTGAGCTGTTTATTGAA+AGG - Chr3:65885055-65885074 MsG0380015148.01.T01:intron 40.0%
GGTGTGATTTATGGCTGATT+TGG - Chr3:65886038-65886057 MsG0380015148.01.T01:intron 40.0%
GTAAAAGGAGAGGTTGTGTT+AGG + Chr3:65885438-65885457 None:intergenic 40.0%
GTAACCCCTTTAACACCTAT+AGG + Chr3:65886630-65886649 None:intergenic 40.0%
GTTCGACAACAAGTACATAG+TGG - Chr3:65887425-65887444 MsG0380015148.01.T01:intron 40.0%
TAAAAAAGGCAGCAGAAGAC+AGG + Chr3:65886158-65886177 None:intergenic 40.0%
TAACAATGCGATGTTGCAAG+TGG - Chr3:65887747-65887766 MsG0380015148.01.T01:intron 40.0%
TAGCCCCTATAGGTGTTAAA+GGG - Chr3:65886622-65886641 MsG0380015148.01.T01:intron 40.0%
TAGCGTATGGTTCGTTGTTA+AGG - Chr3:65888135-65888154 MsG0380015148.01.T01:intron 40.0%
TATGCATGTTTGGTATCTGC+CGG + Chr3:65887619-65887638 None:intergenic 40.0%
TATGTGGTAGTATCTTCGGA+CGG - Chr3:65886120-65886139 MsG0380015148.01.T01:intron 40.0%
TATTCAGCTCCCTTCATGTT+AGG + Chr3:65888502-65888521 None:intergenic 40.0%
TCCAGTACCTTTCCTTCATT+TGG + Chr3:65885686-65885705 None:intergenic 40.0%
TCGAGAACTTGAATACCTTG+TGG + Chr3:65884621-65884640 None:intergenic 40.0%
TCTACATTTGAAAGCAGCAG+TGG - Chr3:65888177-65888196 MsG0380015148.01.T01:intron 40.0%
TGAACATCAACTCTAGCAGT+AGG + Chr3:65886216-65886235 None:intergenic 40.0%
TGATATAGATTGTGGAGGTG+GGG - Chr3:65885568-65885587 MsG0380015148.01.T01:intron 40.0%
TGATGAACAAACTTTGCAGG+TGG - Chr3:65886653-65886672 MsG0380015148.01.T01:intron 40.0%
TGCTAAACCGATCATAACTC+TGG + Chr3:65886803-65886822 None:intergenic 40.0%
TTACGGTGACATTCAATGAG+AGG + Chr3:65886998-65887017 None:intergenic 40.0%
TTGTGGACCTCAATTTCACA+GGG + Chr3:65888917-65888936 None:intergenic 40.0%
TTTGTGGACCTCAATTTCAC+AGG + Chr3:65888918-65888937 None:intergenic 40.0%
! ATGTAAGGGCACAACATCAT+GGG - Chr3:65884642-65884661 MsG0380015148.01.T01:three_prime_UTR 40.0%
! CCTGCAAAGTTTGTTCATCA+AGG + Chr3:65886653-65886672 None:intergenic 40.0%
! GGAATCATAAGCTTTGTGTC+AGG + Chr3:65885952-65885971 None:intergenic 40.0%
! GTAGTGTCCCTAGATTGTTT+TGG - Chr3:65886278-65886297 MsG0380015148.01.T01:intron 40.0%
! GTTGGAATTTTGGATGGGAT+GGG - Chr3:65884971-65884990 MsG0380015148.01.T01:CDS 40.0%
! TCCAAATGAAGGAAAGGTAC+TGG - Chr3:65885682-65885701 MsG0380015148.01.T01:intron 40.0%
! TTCACCGCAGAAACTTTTCA+CGG - Chr3:65887191-65887210 MsG0380015148.01.T01:intron 40.0%
!! AAAATCATGTTGGCTCACAG+TGG - Chr3:65887591-65887610 MsG0380015148.01.T01:intron 40.0%
!! GTAGCAGGTTGTTAGTTTGT+AGG - Chr3:65886017-65886036 MsG0380015148.01.T01:intron 40.0%
!! TGCCACTCATTTGTTTCTGT+CGG + Chr3:65887168-65887187 None:intergenic 40.0%
!!! CTCTAGTTTTTGAGTGTAGC+AGG - Chr3:65886002-65886021 MsG0380015148.01.T01:intron 40.0%
!!! CTTGGTGTCATTTTGGCTAT+AGG - Chr3:65884743-65884762 MsG0380015148.01.T01:CDS 40.0%
!!! GTCTTCTGCTGCCTTTTTTA+TGG - Chr3:65886158-65886177 MsG0380015148.01.T01:intron 40.0%
AAGGCTTATCCCACTAAGTG+GGG - Chr3:65885369-65885388 MsG0380015148.01.T01:intron 45.0%
ACACTGCCATATTGTCCAAG+TGG - Chr3:65887867-65887886 MsG0380015148.01.T01:intron 45.0%
ACCCGAGACGAATTCAGAAT+TGG + Chr3:65886399-65886418 None:intergenic 45.0%
ACTTGCAACCTTACCATGAG+CGG + Chr3:65884675-65884694 None:intergenic 45.0%
AGCCCCTATAGGTGTTAAAG+GGG - Chr3:65886623-65886642 MsG0380015148.01.T01:intron 45.0%
AGTTACTGTGCTCAAGCTTC+AGG - Chr3:65884793-65884812 MsG0380015148.01.T01:CDS 45.0%
ATAGCAAGGCTAACATAGGC+AGG - Chr3:65885480-65885499 MsG0380015148.01.T01:intron 45.0%
ATATTACACCCCCTTCTGGA+TGG - Chr3:65886943-65886962 MsG0380015148.01.T01:CDS 45.0%
ATCCCAAGGCTTCTTTCACT+TGG + Chr3:65888311-65888330 None:intergenic 45.0%
ATTGACCCATCACACAAGCT+AGG + Chr3:65886367-65886386 None:intergenic 45.0%
CAACCAGAAAACTCTCGCTA+AGG + Chr3:65885861-65885880 None:intergenic 45.0%
CAAGGCTTATCCCACTAAGT+GGG - Chr3:65885368-65885387 MsG0380015148.01.T01:intron 45.0%
CAGATTCTTCCTCATCCACA+AGG - Chr3:65884603-65884622 MsG0380015148.01.T01:three_prime_UTR 45.0%
GAAACTTGAGGATGAGGATG+AGG + Chr3:65884576-65884595 None:intergenic 45.0%
GAAATTCTTTCAGGCTGGTG+AGG - Chr3:65888669-65888688 MsG0380015148.01.T01:intron 45.0%
GAATGATACCGCTCATGGTA+AGG - Chr3:65884664-65884683 MsG0380015148.01.T01:three_prime_UTR 45.0%
GAGGATGAAACCCTTTCAGA+TGG - Chr3:65888712-65888731 MsG0380015148.01.T01:CDS 45.0%
GATCTTAAAAGGAGCCAGGA+GGG - Chr3:65886675-65886694 MsG0380015148.01.T01:CDS 45.0%
GATGTAGAGTTGTGTGCTTC+TGG - Chr3:65886236-65886255 MsG0380015148.01.T01:intron 45.0%
GGAAGGGGATTTGGCTAATT+TGG - Chr3:65885612-65885631 MsG0380015148.01.T01:intron 45.0%
GTCCAAGTGAAAGAAGCCTT+GGG - Chr3:65888306-65888325 MsG0380015148.01.T01:intron 45.0%
GTTCATACTGCAGTGTGGTT+GGG - Chr3:65886062-65886081 MsG0380015148.01.T01:CDS 45.0%
TAAACAGCTCACACCTTCCT+TGG + Chr3:65885050-65885069 None:intergenic 45.0%
TCTGCCGTGAAAAGTTTCTG+CGG + Chr3:65887198-65887217 None:intergenic 45.0%
TGTTCATACTGCAGTGTGGT+TGG - Chr3:65886061-65886080 MsG0380015148.01.T01:CDS 45.0%
TGTTTGGACAGGTAAGGAGT+GGG - Chr3:65885808-65885827 MsG0380015148.01.T01:intron 45.0%
TTCATACTGCAGTGTGGTTG+GGG - Chr3:65886063-65886082 MsG0380015148.01.T01:CDS 45.0%
TTCTGAATTCGTCTCGGGTT+CGG - Chr3:65886400-65886419 MsG0380015148.01.T01:intron 45.0%
TTGACCCATCACACAAGCTA+GGG + Chr3:65886366-65886385 None:intergenic 45.0%
! AACTCCCTAGCTTGTGTGAT+GGG - Chr3:65886359-65886378 MsG0380015148.01.T01:intron 45.0%
! AAGTTATATGTCGGTTGCCG+AGG - Chr3:65885412-65885431 MsG0380015148.01.T01:intron 45.0%
! ACACAACCTCTCCTTTTACC+CGG - Chr3:65885439-65885458 MsG0380015148.01.T01:intron 45.0%
! AGTCCTTAGCGAGAGTTTTC+TGG - Chr3:65885855-65885874 MsG0380015148.01.T01:intron 45.0%
! ATCCAGAAGGGGGTGTAATA+TGG + Chr3:65886944-65886963 None:intergenic 45.0%
! ATCTCTGGCGAGGTTTTTAC+TGG - Chr3:65887095-65887114 MsG0380015148.01.T01:intron 45.0%
! ATGGAGATGGGTTTGAGTAG+AGG - Chr3:65885736-65885755 MsG0380015148.01.T01:intron 45.0%
! CATGTAAGGGCACAACATCA+TGG - Chr3:65884641-65884660 MsG0380015148.01.T01:three_prime_UTR 45.0%
! GGTTGGAATTTTGGATGGGA+TGG - Chr3:65884970-65884989 MsG0380015148.01.T01:CDS 45.0%
! GTGCAGGGCAGTTTCAATTT+TGG - Chr3:65886096-65886115 MsG0380015148.01.T01:CDS 45.0%
! TAACTCCCTAGCTTGTGTGA+TGG - Chr3:65886358-65886377 MsG0380015148.01.T01:intron 45.0%
! TCTCTGGCGAGGTTTTTACT+GGG - Chr3:65887096-65887115 MsG0380015148.01.T01:intron 45.0%
! TTGGTGTTCATACTGCAGTG+TGG - Chr3:65886057-65886076 MsG0380015148.01.T01:CDS 45.0%
!! TCATCGACTTAGCTAGCTGA+GGG + Chr3:65888756-65888775 None:intergenic 45.0%
!! TTAGCCTTGCTATGCATAGC+TGG + Chr3:65885473-65885492 None:intergenic 45.0%
!! TTCATCGACTTAGCTAGCTG+AGG + Chr3:65888757-65888776 None:intergenic 45.0%
AACTGCCCTGCACTAAAACG+AGG + Chr3:65886089-65886108 None:intergenic 50.0%
ACTGCCTTCTCTATGAGTGG+AGG - Chr3:65885770-65885789 MsG0380015148.01.T01:intron 50.0%
AGCTGCTAACACATCCTCCA+AGG - Chr3:65885030-65885049 MsG0380015148.01.T01:intron 50.0%
ATAGATTGTGGAGGTGGGGT+GGG - Chr3:65885572-65885591 MsG0380015148.01.T01:intron 50.0%
ATGCGGGAACAGATCATCTC+TGG - Chr3:65887080-65887099 MsG0380015148.01.T01:intron 50.0%
CATGGGAATGATACCGCTCA+TGG - Chr3:65884659-65884678 MsG0380015148.01.T01:three_prime_UTR 50.0%
CCAAGGCTTATCCCACTAAG+TGG - Chr3:65885367-65885386 MsG0380015148.01.T01:intron 50.0%
CCACTTAGTGGGATAAGCCT+TGG + Chr3:65885370-65885389 None:intergenic 50.0%
CCTTCTCTATGAGTGGAGGT+GGG - Chr3:65885774-65885793 MsG0380015148.01.T01:intron 50.0%
CTCACTGCCTTCTCTATGAG+TGG - Chr3:65885767-65885786 MsG0380015148.01.T01:intron 50.0%
CTGTTTGGACAGGTAAGGAG+TGG - Chr3:65885807-65885826 MsG0380015148.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr3:65885373-65885392 MsG0380015148.01.T01:intron 50.0%
GAGACCAGCTATGCATAGCA+AGG - Chr3:65885466-65885485 MsG0380015148.01.T01:intron 50.0%
GCTAACACATCCTCCAAGGA+AGG - Chr3:65885034-65885053 MsG0380015148.01.T01:intron 50.0%
GGATCTTAAAAGGAGCCAGG+AGG - Chr3:65886674-65886693 MsG0380015148.01.T01:CDS 50.0%
GGTCCAAGTGAAAGAAGCCT+TGG - Chr3:65888305-65888324 MsG0380015148.01.T01:intron 50.0%
GGTGGATCTTAAAAGGAGCC+AGG - Chr3:65886671-65886690 MsG0380015148.01.T01:CDS 50.0%
TATAGATTGTGGAGGTGGGG+TGG - Chr3:65885571-65885590 MsG0380015148.01.T01:intron 50.0%
TATAGCCGACCCCACTTAGT+GGG + Chr3:65885381-65885400 None:intergenic 50.0%
TGAAAGCAGCAGTGGTTCCT+TGG - Chr3:65888185-65888204 MsG0380015148.01.T01:intron 50.0%
TGCCATATTACACCCCCTTC+TGG - Chr3:65886939-65886958 MsG0380015148.01.T01:CDS 50.0%
! AATTCGTCTCGGGTTCGGTT+TGG - Chr3:65886405-65886424 MsG0380015148.01.T01:intron 50.0%
! AGCTTTGTGTCAGGGTCAAC+AGG + Chr3:65885943-65885962 None:intergenic 50.0%
! CACAACCTCTCCTTTTACCC+GGG - Chr3:65885440-65885459 MsG0380015148.01.T01:intron 50.0%
! TCTTCGGACGGCAGTTTTTG+CGG - Chr3:65886132-65886151 MsG0380015148.01.T01:intron 50.0%
! TTCAGGCTGGTGAGGTACTA+TGG - Chr3:65888677-65888696 MsG0380015148.01.T01:intron 50.0%
!! ATGTTGGCTCACAGTGGTTC+CGG - Chr3:65887597-65887616 MsG0380015148.01.T01:intron 50.0%
ACAGCTCACACCTTCCTTGG+AGG + Chr3:65885047-65885066 None:intergenic 55.0%
AGCATGTTTCTCCACCCTCC+TGG + Chr3:65886692-65886711 None:intergenic 55.0%
AGGGTTTCATCCTCCCTCTG+TGG + Chr3:65888706-65888725 None:intergenic 55.0%
AGGTAAGGAGTGGGTGAGGA+GGG - Chr3:65885817-65885836 MsG0380015148.01.T01:intron 55.0%
AGGTACTATGGACCCCACAG+AGG - Chr3:65888689-65888708 MsG0380015148.01.T01:CDS 55.0%
CCCACCTCCACTCATAGAGA+AGG + Chr3:65885777-65885796 None:intergenic 55.0%
CTATAGCCGACCCCACTTAG+TGG + Chr3:65885382-65885401 None:intergenic 55.0%
CTTAAAAGGAGCCAGGAGGG+TGG - Chr3:65886678-65886697 MsG0380015148.01.T01:CDS 55.0%
GCCTTCTCTATGAGTGGAGG+TGG - Chr3:65885773-65885792 MsG0380015148.01.T01:intron 55.0%
GGAACAGATCATCTCTGGCG+AGG - Chr3:65887085-65887104 MsG0380015148.01.T01:intron 55.0%
GGAGAGGTTGTGTTAGGCCT+CGG + Chr3:65885432-65885451 None:intergenic 55.0%
GGGTTTCATCCTCCCTCTGT+GGG + Chr3:65888705-65888724 None:intergenic 55.0%
GGTACTATGGACCCCACAGA+GGG - Chr3:65888690-65888709 MsG0380015148.01.T01:CDS 55.0%
GGTTGCTGCTGTCAGTCTGT+GGG - Chr3:65885876-65885895 MsG0380015148.01.T01:intron 55.0%
GGTTTCATCCTCCCTCTGTG+GGG + Chr3:65888704-65888723 None:intergenic 55.0%
GTGCTTCTGGTCTGCAGCTT+TGG - Chr3:65886249-65886268 MsG0380015148.01.T01:intron 55.0%
TCAAGCCCGGGTAAAAGGAG+AGG + Chr3:65885448-65885467 None:intergenic 55.0%
TGGTCTCAAGCCCGGGTAAA+AGG + Chr3:65885453-65885472 None:intergenic 55.0%
TGGTTGCTGCTGTCAGTCTG+TGG - Chr3:65885875-65885894 MsG0380015148.01.T01:intron 55.0%
! CTGGCGAGGTTTTTACTGGG+TGG - Chr3:65887099-65887118 MsG0380015148.01.T01:intron 55.0%
! TGCATAGCTGGTCTCAAGCC+CGG + Chr3:65885461-65885480 None:intergenic 55.0%
!! GAGGAGGGGTACGTTTTGGT+TGG - Chr3:65885832-65885851 MsG0380015148.01.T01:intron 55.0%
!! TGGGGCCTCGTTTTAGTGCA+GGG - Chr3:65886081-65886100 MsG0380015148.01.T01:CDS 55.0%
!! TTGGGGCCTCGTTTTAGTGC+AGG - Chr3:65886080-65886099 MsG0380015148.01.T01:CDS 55.0%
ACTATGGACCCCACAGAGGG+AGG - Chr3:65888693-65888712 MsG0380015148.01.T01:CDS 60.0%
CAGGTAAGGAGTGGGTGAGG+AGG - Chr3:65885816-65885835 MsG0380015148.01.T01:intron 60.0%
GGACAGGTAAGGAGTGGGTG+AGG - Chr3:65885813-65885832 MsG0380015148.01.T01:intron 60.0%
GGTAAGGAGTGGGTGAGGAG+GGG - Chr3:65885818-65885837 MsG0380015148.01.T01:intron 60.0%
TGCTGCTGTCAGTCTGTGGG+AGG - Chr3:65885879-65885898 MsG0380015148.01.T01:intron 60.0%
! GCATAGCTGGTCTCAAGCCC+GGG + Chr3:65885460-65885479 None:intergenic 60.0%
!! GGGTGAGGAGGGGTACGTTT+TGG - Chr3:65885828-65885847 MsG0380015148.01.T01:intron 60.0%
TGTGGAGGTGGGGTGGGTAG+AGG - Chr3:65885578-65885597 MsG0380015148.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 65884539 65888962 65884539 ID=MsG0380015148.01;Name=MsG0380015148.01
Chr3 mRNA 65884539 65888962 65884539 ID=MsG0380015148.01.T01;Parent=MsG0380015148.01;Name=MsG0380015148.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0.83|0.71|1|1|1|7|176|295
Chr3 exon 65884539 65884819 65884539 ID=MsG0380015148.01.T01:exon:22890;Parent=MsG0380015148.01.T01
Chr3 exon 65884925 65885041 65884925 ID=MsG0380015148.01.T01:exon:22889;Parent=MsG0380015148.01.T01
Chr3 exon 65886055 65886138 65886055 ID=MsG0380015148.01.T01:exon:22888;Parent=MsG0380015148.01.T01
Chr3 exon 65886665 65886829 65886665 ID=MsG0380015148.01.T01:exon:22887;Parent=MsG0380015148.01.T01
Chr3 exon 65886927 65886982 65886927 ID=MsG0380015148.01.T01:exon:22886;Parent=MsG0380015148.01.T01
Chr3 exon 65888446 65888530 65888446 ID=MsG0380015148.01.T01:exon:22885;Parent=MsG0380015148.01.T01
Chr3 exon 65888687 65888962 65888687 ID=MsG0380015148.01.T01:exon:22884;Parent=MsG0380015148.01.T01
Chr3 CDS 65888687 65888962 65888687 ID=MsG0380015148.01.T01:cds;Parent=MsG0380015148.01.T01
Chr3 CDS 65888446 65888530 65888446 ID=MsG0380015148.01.T01:cds;Parent=MsG0380015148.01.T01
Chr3 CDS 65886927 65886982 65886927 ID=MsG0380015148.01.T01:cds;Parent=MsG0380015148.01.T01
Chr3 CDS 65886665 65886829 65886665 ID=MsG0380015148.01.T01:cds;Parent=MsG0380015148.01.T01
Chr3 CDS 65886055 65886138 65886055 ID=MsG0380015148.01.T01:cds;Parent=MsG0380015148.01.T01
Chr3 CDS 65884925 65885041 65884925 ID=MsG0380015148.01.T01:cds;Parent=MsG0380015148.01.T01
Chr3 CDS 65884715 65884819 65884715 ID=MsG0380015148.01.T01:cds;Parent=MsG0380015148.01.T01
Chr3 three_prime_UTR 65884539 65884714 65884539 ID=MsG0380015148.01.T01:three_prime_utr;Parent=MsG0380015148.01.T01
Gene Sequence

>MsG0380015148.01.T01

ATGGGAGGAAGTTTCTTCAATTCAGATTCTTCTTCCTCATCCTCATCCTCAAGTTTCTTCAGTTCAGATTCTTCCTCATCCACAAGGTATTCAAGTTCTCGACATGTAAGGGCACAACATCATGGGAATGATACCGCTCATGGTAAGGTTGCAAGTGATGATGAAATTGAAACATGGTTCTTGTTTTTCTTCTTGGTACTTGTACTTGGTGTCATTTTGGCTATAGGTCTTTGTAAAGAAATCGATAAGAATACAGTTACTGTGCTCAAGCTTCAGGTTGGAATTTTGGATGGGATGGGATGTACAATTCAAAGGGATCTGACTAGGATTGCAGAAGCTGCTAACACATCCTCCAAGGAAGAGACAATACAAACTTTAGAGAAACATCATCGTTACTGTAAAGCAGGATATTCATCTGTGGATCTTAAAAGGAGCCAGGAGGGTGGAGAAACATGCTATAACCAACTATCAATTGAAGAAAGGGAAAAATTTGATGGAGAGACATTAGTTAACTTGAGCAACAACAATAAGACACGTATAAGAAGCCAGAGTTATGATCGGTTTAGCAATGAATATTCCACGATTGATGTAGAAAAGAGTTCTGAAGAAACCGAGAAATTTGAAAAAAAGAAGCTTCGCAGTGGGTTCGACAACAAGTACATAGTGGTAACAATATTGGTAGCTACTAAAGGAGCACATAAGCTACCTAACATGAAGGGAGCTGAATATTTAAAGGAAGCTTTGCAAAAACTTACATCCCTTCTCTCCAGCAAAAATTTATTAGCTGGTGAGGTACTATGGACCCCACAGAGGGAGGATGAAACCCTTTCAGATGGAAAACTACTTAAAGATTACCCTCAGCTAGCTAAGTCGATGAAATATGAATAA
Protein sequence

>MsG0380015148.01.T01

MGGSFFNSDSSSSSSSSSFFSSDSSSSTRYSSSRHVRAQHHGNDTAHGKVASDDEIETWFLFFFLVLVLGVILAIGLCKEIDKNTVTVLKLQVGILDGMGCTIQRDLTRIAEAANTSSKEETIQTLEKHHRYCKAGYSSVDLKRSQEGGETCYNQLSIEEREKFDGETLVNLSNNNKTRIRSQSYDRFSNEYSTIDVEKSSEETEKFEKKKLRSGFDNKYIVVTILVATKGAHKLPNMKGAEYLKEALQKLTSLLSSKNLLAGEVLWTPQREDETLSDGKLLKDYPQLAKSMKYE*