AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015471.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015471.01.T01 MTR_3g070720 96.639 595 18 1 1 595 1 593 0.0 1195
MsG0380015471.01.T01 MTR_3g069280 90.924 595 31 2 1 595 1 572 0.0 1014
MsG0380015471.01.T01 MTR_3g070720 95.992 499 18 1 1 499 1 497 0.0 995
MsG0380015471.01.T01 MTR_5g082620 76.142 591 133 5 7 594 3 588 0.0 933
MsG0380015471.01.T01 MTR_3g070720 95.745 470 18 1 1 470 1 468 0.0 930
MsG0380015471.01.T01 MTR_3g070720 95.933 418 15 1 1 418 1 416 0.0 827
MsG0380015471.01.T01 MTR_5g071010 62.982 597 206 7 9 595 3 594 0.0 768
MsG0380015471.01.T01 MTR_5g082590 60.413 581 198 9 28 594 19 581 0.0 693
MsG0380015471.01.T01 MTR_5g071040 52.605 595 244 9 3 594 13 572 0.0 602
MsG0380015471.01.T01 MTR_5g082580 51.167 600 258 8 18 594 19 606 0.0 597
MsG0380015471.01.T01 MTR_3g070710 50.847 590 270 9 12 594 10 586 0.0 580
MsG0380015471.01.T01 MTR_3g070560 51.695 590 267 9 12 594 9 587 0.0 576
MsG0380015471.01.T01 MTR_3g070560 55.714 420 178 4 175 594 3 414 3.10e-162 470
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015471.01.T01 AT3G08510 70.169 590 164 6 7 595 3 581 0.0 859
MsG0380015471.01.T01 AT3G08510 70.169 590 164 6 7 595 3 581 0.0 859
MsG0380015471.01.T01 AT3G55940 66.892 592 183 7 7 595 3 584 0.0 802
MsG0380015471.01.T01 AT3G08510 66.102 590 159 7 7 595 3 552 0.0 784
MsG0380015471.01.T01 AT3G08510 66.102 590 159 7 7 595 3 552 0.0 784
MsG0380015471.01.T01 AT2G40116 60.573 558 199 7 44 594 69 612 0.0 682
MsG0380015471.01.T01 AT5G58700 56.551 603 248 7 1 595 1 597 0.0 680
MsG0380015471.01.T01 AT5G58700 56.551 603 248 7 1 595 1 597 0.0 680
MsG0380015471.01.T01 AT5G58700 63.673 490 171 4 109 595 4 489 0.0 637
MsG0380015471.01.T01 AT5G58690 52.167 600 246 7 9 595 7 578 0.0 627
MsG0380015471.01.T01 AT5G58690 52.167 600 246 7 9 595 7 578 0.0 627
MsG0380015471.01.T01 AT5G58690 53.516 583 229 8 27 595 5 559 0.0 620
MsG0380015471.01.T01 AT5G58670 52.641 587 245 4 7 592 2 556 0.0 615
MsG0380015471.01.T01 AT4G38530 49.744 587 259 8 8 592 3 555 0.0 578
MsG0380015471.01.T01 AT3G47290 39.648 512 248 10 84 594 79 530 2.42e-118 362
MsG0380015471.01.T01 AT3G47290 39.839 497 238 10 84 579 79 515 2.54e-114 352
MsG0380015471.01.T01 AT3G47220 36.851 578 289 13 27 594 19 530 7.21e-112 345

Find 163 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATTATAATCCATTAAT+TGG 0.072901 3:+70651878 MsG0380015471.01.T01:CDS
AAGATAGTTGGTTACCTTCT+TGG 0.190932 3:+70653086 MsG0380015471.01.T01:CDS
CAAATGTTTGACGTCTATTA+AGG 0.229990 3:+70650701 MsG0380015471.01.T01:CDS
GGTATTTACACGAATATCTA+AGG 0.236103 3:+70653435 MsG0380015471.01.T01:three_prime_UTR
CCATGCATCCACCCAATTAA+TGG 0.240859 3:-70651890 None:intergenic
AGGATCGAAAACCTCATTAA+TGG 0.247589 3:-70652332 None:intergenic
CGAATTCCCGCTTTCTGTTC+CGG 0.255565 3:+70653120 MsG0380015471.01.T01:CDS
TGGTTCTTTGGCAGGGTTAT+GGG 0.259926 3:+70652221 MsG0380015471.01.T01:intron
TAATTAGGTGACTGTATATA+TGG 0.261260 3:+70652511 MsG0380015471.01.T01:intron
GTGGTTCTTTGGCAGGGTTA+TGG 0.264327 3:+70652220 MsG0380015471.01.T01:intron
CTTAGACGTCTCACTTTATC+AGG 0.266369 3:-70651416 None:intergenic
CCCGCTTTCTGTTCCGGAGC+TGG 0.275180 3:+70653126 MsG0380015471.01.T01:CDS
GGTAGTCAACTGATGTATTT+TGG 0.286294 3:-70651328 None:intergenic
CTTATGCAGGTTGGAATTGC+TGG 0.289356 3:+70653022 MsG0380015471.01.T01:intron
ATGTCTGAGAAGGATGATTT+TGG 0.308425 3:+70653181 MsG0380015471.01.T01:CDS
AGGGTTATGGGAGATCTCTT+TGG 0.311117 3:+70652233 MsG0380015471.01.T01:intron
TCAATAAAATAAACAGTATA+TGG 0.315863 3:-70653396 None:intergenic
TTCGATGGCAAATGAGCTTT+AGG 0.326162 3:-70652352 None:intergenic
TATTCCACCTTTAGGCTTCC+CGG 0.346071 3:-70651372 None:intergenic
CTCTGAAGTGCTTTGATGAT+GGG 0.355562 3:-70650487 None:intergenic
GGGTGATTGAATTGGATATA+TGG 0.356065 3:+70650518 MsG0380015471.01.T01:CDS
GTTGTATTTATCTCCTTTGC+GGG 0.362756 3:-70653266 None:intergenic
AATCAAACAAAACACACTTT+TGG 0.363285 3:-70653498 None:intergenic
AGATGTGTCTCATTGTGTTT+TGG 0.366904 3:+70653545 MsG0380015471.01.T01:three_prime_UTR
CCACCTTACTCCTGATCTTC+AGG 0.370917 3:+70650773 MsG0380015471.01.T01:CDS
GGTCATAATTCATATCTAAC+TGG 0.373291 3:+70650433 MsG0380015471.01.T01:CDS
CCACAGAAGGGAAAGCCTTT+AGG 0.373754 3:+70651078 MsG0380015471.01.T01:CDS
GGATCGAAAACCTCATTAAT+GGG 0.374497 3:-70652331 None:intergenic
CTTCGTTGCGTCAGAATATC+CGG 0.378354 3:+70650731 MsG0380015471.01.T01:CDS
AAGGGTGTGAGAATAATTAT+TGG 0.381965 3:+70653454 MsG0380015471.01.T01:three_prime_UTR
TATGTTTCTGCTGCCGGCGC+GGG 0.383483 3:+70649154 MsG0380015471.01.T01:CDS
CTTAATAGACGTCAAACATT+TGG 0.383621 3:-70650700 None:intergenic
AGGTGTTAGGGTGATTGAAT+TGG 0.383680 3:+70650510 MsG0380015471.01.T01:CDS
CATTCCACTATTCCACCTTT+AGG 0.387588 3:-70651380 None:intergenic
TAGATGGTTAGTCAAACATT+TGG 0.388756 3:+70650919 MsG0380015471.01.T01:intron
AAGCACTTCAGAGAGGTGTT+AGG 0.389332 3:+70650497 MsG0380015471.01.T01:CDS
GCCACTTTGGCCTGAAGATC+AGG 0.391390 3:-70650783 None:intergenic
AGGAGTAAGGTGGTCTTCTA+AGG 0.392968 3:-70650763 None:intergenic
GGAGGCACCGCCGGAGATAA+AGG 0.396433 3:+70649194 MsG0380015471.01.T01:CDS
GCCATCGAAAACTACTTTGA+AGG 0.398900 3:+70652366 MsG0380015471.01.T01:CDS
TTTAGGTGATGAAGAAGCTT+GGG 0.407451 3:+70651095 MsG0380015471.01.T01:CDS
CCTCAATCAGAAAGCTTCTC+AGG 0.413075 3:-70649266 None:intergenic
CCTGAGAAGCTTTCTGATTG+AGG 0.413824 3:+70649266 MsG0380015471.01.T01:CDS
GAAACACAAGCCATCATTGA+TGG 0.419375 3:+70649318 MsG0380015471.01.T01:CDS
TCTCTGAAGTGCTTTGATGA+TGG 0.427275 3:-70650488 None:intergenic
TCCTACCTCAGAAACCTTGA+AGG 0.435352 3:+70650957 MsG0380015471.01.T01:CDS
TGTTGTATTTATCTCCTTTG+CGG 0.442914 3:-70653267 None:intergenic
TCTCCTTTGCGGGAATGTAA+TGG 0.444112 3:-70653256 None:intergenic
CATACCCTTGCATAGAAGTC+TGG 0.448430 3:-70652587 None:intergenic
AGTTTCTTCAAGTTTCTCTT+CGG 0.450799 3:+70649387 MsG0380015471.01.T01:CDS
GATGATGTTGATGTCCTTCA+TGG 0.453099 3:+70650556 MsG0380015471.01.T01:CDS
TCTTCTAAGGTTATTACAAC+CGG 0.454332 3:-70650750 None:intergenic
CAAATTATAATCCATTAATT+GGG 0.455647 3:+70651879 MsG0380015471.01.T01:CDS
ATGCGAAGCAGCGCCAGCTC+CGG 0.456222 3:-70653139 None:intergenic
CGGGTTTAAACTCGGCGTAT+TGG 0.456988 3:+70649173 MsG0380015471.01.T01:CDS
CGCTTAATTGCTATTCATGC+CGG 0.460356 3:+70651353 MsG0380015471.01.T01:CDS
AAGGTACTCCTTAGGCGGCT+TGG 0.465613 3:-70651025 None:intergenic
ATAGTACCGCCTCTCAAACT+AGG 0.474142 3:-70651129 None:intergenic
CATACGGAAAAGAAATTGTC+AGG 0.475072 3:+70651474 MsG0380015471.01.T01:CDS
CAAAGTCAATAGAAGATAGT+TGG 0.476057 3:+70653074 MsG0380015471.01.T01:CDS
TCACATTATTATATATTCAC+TGG 0.476852 3:+70650412 MsG0380015471.01.T01:CDS
CCTAAAGGCTTTCCCTTCTG+TGG 0.479774 3:-70651078 None:intergenic
GAGGTAATGCGTGTACCTTT+CGG 0.479808 3:-70651854 None:intergenic
TACCATCGTTACTCCGATGA+AGG 0.479952 3:+70649222 MsG0380015471.01.T01:CDS
TTGGTTACCTTCTTGGAATG+AGG 0.482651 3:+70653093 MsG0380015471.01.T01:CDS
GTTTAAACTCGGCGTATTGG+AGG 0.484480 3:+70649176 MsG0380015471.01.T01:CDS
ACTCTTGCGTTATAATGTAA+TGG 0.486009 3:-70653358 None:intergenic
AACAAAACCGCATCCTCCAT+TGG 0.486065 3:-70652278 None:intergenic
CCATTAATTGGGTGGATGCA+TGG 0.487420 3:+70651890 MsG0380015471.01.T01:CDS
TGTTGATGAAGATGATCTTA+AGG 0.488941 3:+70651271 MsG0380015471.01.T01:CDS
TCTTCAGGCCAAAGTGGCTC+AGG 0.489930 3:+70650788 MsG0380015471.01.T01:CDS
GAAAACTGGTCCCATTAATG+AGG 0.492864 3:+70652321 MsG0380015471.01.T01:CDS
GATGGTTGCATTTAACATGC+AGG 0.494100 3:+70651919 MsG0380015471.01.T01:CDS
CAAGCTTCTTCATCACCTAA+AGG 0.494465 3:-70651093 None:intergenic
AAGGACATCAACATCATCCT+TGG 0.498603 3:-70650551 None:intergenic
CTTTAGGTGATGAAGAAGCT+TGG 0.501759 3:+70651094 MsG0380015471.01.T01:CDS
GGAAAATGAGGAACCACAGA+AGG 0.504129 3:+70651065 MsG0380015471.01.T01:CDS
ATATTCGTGTAAATACCATA+AGG 0.513293 3:-70653429 None:intergenic
TCCTTCAAGGTTTCTGAGGT+AGG 0.514356 3:-70650958 None:intergenic
AAAAGACGAAAAGGAAAATG+AGG 0.515925 3:+70651053 MsG0380015471.01.T01:CDS
AGCACTTCAGAGAGGTGTTA+GGG 0.516302 3:+70650498 MsG0380015471.01.T01:CDS
CGGTACTATAGCTGATTACA+AGG 0.516593 3:+70651143 MsG0380015471.01.T01:CDS
CGGCGTATTGGAGGCACCGC+CGG 0.517697 3:+70649185 MsG0380015471.01.T01:CDS
GTAACTAACCTGAGCCACTT+TGG 0.519283 3:-70650796 None:intergenic
AAACATTTGGTAAGTGCCAC+AGG 0.519573 3:-70650687 None:intergenic
CAAGGAATGTTTAAAGCCAA+TGG 0.521167 3:+70652262 MsG0380015471.01.T01:CDS
GAAGCCTAAAGGTGGAATAG+TGG 0.521864 3:+70651376 MsG0380015471.01.T01:CDS
CCTTGAAGCAAAAGACGAAA+AGG 0.523072 3:+70651044 MsG0380015471.01.T01:CDS
ATCGTTACTCCGATGAAGGC+GGG 0.525010 3:+70649226 MsG0380015471.01.T01:CDS
TGCCGGCGCGGGTTTAAACT+CGG 0.525526 3:+70649165 MsG0380015471.01.T01:CDS
TCTGAAGTGCTTTGATGATG+GGG 0.529577 3:-70650486 None:intergenic
AGGTGAAGGAAATTCCTTCA+AGG 0.530092 3:-70650971 None:intergenic
AATTAGGTGACTGTATATAT+GGG 0.530266 3:+70652512 MsG0380015471.01.T01:intron
TGGCCTGAAGATCAGGAGTA+AGG 0.530572 3:-70650776 None:intergenic
TGAAGATGATCTTAAGGAGG+AGG 0.532033 3:+70651277 MsG0380015471.01.T01:CDS
CATATCAACCAAGCCGCCTA+AGG 0.532591 3:+70651017 MsG0380015471.01.T01:CDS
TTTGCTTCAAGGTACTCCTT+AGG 0.533133 3:-70651033 None:intergenic
ATTATAATCCATTAATTGGG+TGG 0.536189 3:+70651882 MsG0380015471.01.T01:CDS
ACAGCGTATGTTTCTGCTGC+CGG 0.536369 3:+70649148 MsG0380015471.01.T01:CDS
ATTCATGCCGGGAAGCCTAA+AGG 0.537834 3:+70651365 MsG0380015471.01.T01:CDS
TATTCGTGTAAATACCATAA+GGG 0.540833 3:-70653428 None:intergenic
TGGTAAAGCTCCTTTATCTC+CGG 0.542445 3:-70649204 None:intergenic
TGTCATAATCCCGCCTTCAT+CGG 0.543605 3:-70649235 None:intergenic
TTTAAAGCCAATGGAGGATG+CGG 0.547215 3:+70652271 MsG0380015471.01.T01:CDS
GCCAGCTCCGGAACAGAAAG+CGG 0.549635 3:-70653127 None:intergenic
AAGTGAGTCACAGCTCGAAA+AGG 0.551984 3:+70651442 MsG0380015471.01.T01:CDS
AATATATAATAATGTGACAA+TGG 0.552360 3:-70650406 None:intergenic
GCTTAATTGCTATTCATGCC+GGG 0.555867 3:+70651354 MsG0380015471.01.T01:CDS
CGGATATTCTGACGCAACGA+AGG 0.555918 3:-70650730 None:intergenic
CCAGCTCCGGAACAGAAAGC+GGG 0.556338 3:-70653126 None:intergenic
ACTCCAGTGGAAGGTAAAAG+AGG 0.556646 3:-70649423 None:intergenic
TAGTACCGCCTCTCAAACTA+GGG 0.558608 3:-70651128 None:intergenic
ACATCATCCTTGGAGTCATT+AGG 0.558879 3:-70650541 None:intergenic
ACAATGGTAAACTCATATCT+TGG 0.558961 3:-70650390 None:intergenic
TAATGGATTATAATTTGATG+AGG 0.561590 3:-70651873 None:intergenic
GTGGATGCATGGAGCTCAGA+TGG 0.561990 3:+70651901 MsG0380015471.01.T01:CDS
ATGTCTATGACCATCAATGA+TGG 0.562595 3:-70649328 None:intergenic
TTGAGTATCTTTCATCGTAG+AGG 0.565571 3:+70649351 MsG0380015471.01.T01:CDS
TCCTGATCTTCAGGCCAAAG+TGG 0.568046 3:+70650782 MsG0380015471.01.T01:CDS
GTATGTTTCTGCTGCCGGCG+CGG 0.570250 3:+70649153 MsG0380015471.01.T01:CDS
GAAAAGGCTGCTGAAACATA+CGG 0.572490 3:+70651458 MsG0380015471.01.T01:CDS
CTGAAGTGCTTTGATGATGG+GGG 0.576975 3:-70650485 None:intergenic
GCTTCAAGGTACTCCTTAGG+CGG 0.576983 3:-70651030 None:intergenic
AGATCTCTTTGGTTGATGCA+AGG 0.584104 3:+70652244 MsG0380015471.01.T01:CDS
CATCGTTACTCCGATGAAGG+CGG 0.584531 3:+70649225 MsG0380015471.01.T01:CDS
GACAAACATGCTTGCCTGTG+TGG 0.587256 3:+70653206 MsG0380015471.01.T01:CDS
GGTAAACTTACATTCCATGA+AGG 0.589047 3:-70650570 None:intergenic
AAAAGGATTACTCCAGTGGA+AGG 0.592170 3:-70649432 None:intergenic
GTGACTGTATATATGGGAGA+AGG 0.593969 3:+70652518 MsG0380015471.01.T01:CDS
CGCCGAGTTTAAACCCGCGC+CGG 0.595676 3:-70649167 None:intergenic
CTGTATATATGGGAGAAGGA+TGG 0.596370 3:+70652522 MsG0380015471.01.T01:CDS
GTATTTACACGAATATCTAA+GGG 0.597571 3:+70653436 MsG0380015471.01.T01:three_prime_UTR
ATTCCATTACATTCCCGCAA+AGG 0.598056 3:+70653253 MsG0380015471.01.T01:CDS
CGCCTTCATCGGAGTAACGA+TGG 0.598173 3:-70649224 None:intergenic
CACCTCCAGACTTCTATGCA+AGG 0.598961 3:+70652582 MsG0380015471.01.T01:CDS
GGTGTGAGAATAATTATTGG+TGG 0.599924 3:+70653457 MsG0380015471.01.T01:three_prime_UTR
TTCTATCTTTAGCAAAACAG+TGG 0.603639 3:+70651248 MsG0380015471.01.T01:intron
AAATTCCTTCAAGGTTTCTG+AGG 0.606668 3:-70650962 None:intergenic
ACCTCCAGACTTCTATGCAA+GGG 0.606755 3:+70652583 MsG0380015471.01.T01:CDS
GGAGGAAGATTCTGATGAAG+CGG 0.606856 3:+70651295 MsG0380015471.01.T01:CDS
GAAAATGAGGAACCACAGAA+GGG 0.607163 3:+70651066 MsG0380015471.01.T01:CDS
TGATGAAGATGATCTTAAGG+AGG 0.607713 3:+70651274 MsG0380015471.01.T01:CDS
AAAGAAGTCCCTAGTTTGAG+AGG 0.608524 3:+70651120 MsG0380015471.01.T01:CDS
TATATGGCCTAATGACTCCA+AGG 0.611089 3:+70650534 MsG0380015471.01.T01:CDS
TCGAACACCTCATTCCAAGA+AGG 0.611637 3:-70653100 None:intergenic
ACAAACATGCTTGCCTGTGT+GGG 0.623346 3:+70653207 MsG0380015471.01.T01:CDS
TAAAGCTCCTTTATCTCCGG+CGG 0.638010 3:-70649201 None:intergenic
TGAATATGACATGTCTGAGA+AGG 0.639315 3:+70653171 MsG0380015471.01.T01:CDS
CAGGACATTGACGACTCCTG+TGG 0.642402 3:+70650671 MsG0380015471.01.T01:intron
ACCCTTGCATAGAAGTCTGG+AGG 0.646972 3:-70652584 None:intergenic
CCAGTGGAAGGTAAAAGAGG+AGG 0.651028 3:-70649420 None:intergenic
TTAGGTGATGAAGAAGCTTG+GGG 0.654802 3:+70651096 MsG0380015471.01.T01:CDS
CCACTTCTTAGTTCCCACAC+AGG 0.655020 3:-70653220 None:intergenic
AATAGTGGAATGTCTCAAAG+TGG 0.664523 3:+70651391 MsG0380015471.01.T01:CDS
CATGAATAGCAATTAAGCGT+CGG 0.671424 3:-70651349 None:intergenic
CTGTACAAAATATATAGCAG+AGG 0.673015 3:-70653335 None:intergenic
CCTGAAGATCAGGAGTAAGG+TGG 0.674793 3:-70650773 None:intergenic
GGAATGTTTAAAGCCAATGG+AGG 0.677096 3:+70652265 MsG0380015471.01.T01:CDS
CCTGTGTGGGAACTAAGAAG+TGG 0.678789 3:+70653220 MsG0380015471.01.T01:CDS
ATATTGCGAGTGTATCCGAA+AGG 0.679225 3:+70651839 MsG0380015471.01.T01:CDS
GAAGTCCCTAGTTTGAGAGG+CGG 0.688180 3:+70651123 MsG0380015471.01.T01:CDS
CATGCCGGGAAGCCTAAAGG+TGG 0.692926 3:+70651368 MsG0380015471.01.T01:CDS
ATCATCAAAGCACTTCAGAG+AGG 0.716058 3:+70650490 MsG0380015471.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGCAAAAATAAATATATTAA+TGG - Chr3:70652196-70652215 None:intergenic 10.0%
!! ATAAATTATTTCAATAACAA+AGG - Chr3:70652816-70652835 None:intergenic 10.0%
!! AAATTTCATTGTAAAAACAA+AGG - Chr3:70649836-70649855 None:intergenic 15.0%
!! AATAAAGTTAAGAGAAAAAA+AGG - Chr3:70649452-70649471 None:intergenic 15.0%
!! AATATATAATAATGTGACAA+TGG - Chr3:70650409-70650428 None:intergenic 15.0%
!! CAAATTATAATCCATTAATT+GGG + Chr3:70651879-70651898 MsG0380015471.01.T01:CDS 15.0%
!! TCAAATAAAATAATTCATAC+AGG - Chr3:70652637-70652656 None:intergenic 15.0%
!! TCAAATTATAATCCATTAAT+TGG + Chr3:70651878-70651897 MsG0380015471.01.T01:CDS 15.0%
!! TCAATAAAATAAACAGTATA+TGG - Chr3:70653399-70653418 None:intergenic 15.0%
!! TTGTAACTCATAATAATATT+GGG + Chr3:70649633-70649652 MsG0380015471.01.T01:intron 15.0%
!! TTTGTAACTCATAATAATAT+TGG + Chr3:70649632-70649651 MsG0380015471.01.T01:intron 15.0%
!!! AATATATTTATTTTTGCTGT+GGG + Chr3:70652198-70652217 MsG0380015471.01.T01:intron 15.0%
!!! ATTTTGGGTAATAATTTTTA+AGG + Chr3:70652020-70652039 MsG0380015471.01.T01:intron 15.0%
!!! ATTTTTGATAAATCAATTTC+GGG - Chr3:70650141-70650160 None:intergenic 15.0%
!!! CATTTTTGATAAATCAATTT+CGG - Chr3:70650142-70650161 None:intergenic 15.0%
!!! TAAGATTTAAGATGATTTAT+GGG + Chr3:70652611-70652630 MsG0380015471.01.T01:intron 15.0%
!!! TAATATATTTATTTTTGCTG+TGG + Chr3:70652197-70652216 MsG0380015471.01.T01:intron 15.0%
!! AAATATATAGATGCTATAAC+TGG - Chr3:70652909-70652928 None:intergenic 20.0%
!! AATGTTGTATATAAATTGCA+AGG + Chr3:70651180-70651199 MsG0380015471.01.T01:intron 20.0%
!! CTAACTCTATAAATTATGTT+TGG - Chr3:70650165-70650184 None:intergenic 20.0%
!! TAGATAAAGTGATTTATGTT+TGG + Chr3:70650005-70650024 MsG0380015471.01.T01:intron 20.0%
!! TATCTCATATTTCTTTAATC+CGG - Chr3:70651598-70651617 None:intergenic 20.0%
!! TCACATTATTATATATTCAC+TGG + Chr3:70650412-70650431 MsG0380015471.01.T01:CDS 20.0%
!! TTTAGATTAAATAACCTTGT+TGG + Chr3:70649581-70649600 MsG0380015471.01.T01:intron 20.0%
!!! CATTTATATTCAATTAGCTT+TGG + Chr3:70651727-70651746 MsG0380015471.01.T01:intron 20.0%
!!! CTAAGATTTAAGATGATTTA+TGG + Chr3:70652610-70652629 MsG0380015471.01.T01:intron 20.0%
!!! GTAATTTGATTGTGTTTTTT+TGG + Chr3:70649484-70649503 MsG0380015471.01.T01:intron 20.0%
!!! GTAATTTTTATGAACTATGT+TGG + Chr3:70650312-70650331 MsG0380015471.01.T01:intron 20.0%
!!! TAATGGATTATAATTTGATG+AGG - Chr3:70651876-70651895 None:intergenic 20.0%
!!! TTTAATTTTGTATGTGAGAT+TGG + Chr3:70651206-70651225 MsG0380015471.01.T01:intron 20.0%
!!! TTTTTGATAAATCAATTTCG+GGG - Chr3:70650140-70650159 None:intergenic 20.0%
! AACCATCTAAAAATTGAACA+GGG - Chr3:70650908-70650927 None:intergenic 25.0%
! AATTAGGTGACTGTATATAT+GGG + Chr3:70652512-70652531 MsG0380015471.01.T01:intron 25.0%
! AGAAACAGAGAATCAAAAAA+TGG + Chr3:70649101-70649120 MsG0380015471.01.T01:exon 25.0%
! ATATTCGTGTAAATACCATA+AGG - Chr3:70653432-70653451 None:intergenic 25.0%
! ATTATAATCCATTAATTGGG+TGG + Chr3:70651882-70651901 MsG0380015471.01.T01:CDS 25.0%
! ATTGAATTTAATAGCCAACA+AGG - Chr3:70649598-70649617 None:intergenic 25.0%
! GTATTTACACGAATATCTAA+GGG + Chr3:70653436-70653455 MsG0380015471.01.T01:three_prime_UTR 25.0%
! TAACCATCTAAAAATTGAAC+AGG - Chr3:70650909-70650928 None:intergenic 25.0%
! TAACTTCATTTGTCTATGTT+TGG + Chr3:70649685-70649704 MsG0380015471.01.T01:intron 25.0%
! TAATTAGGTGACTGTATATA+TGG + Chr3:70652511-70652530 MsG0380015471.01.T01:intron 25.0%
! TATTCGTGTAAATACCATAA+GGG - Chr3:70653431-70653450 None:intergenic 25.0%
! TATTTGATAAACTCTTATGC+AGG + Chr3:70653009-70653028 MsG0380015471.01.T01:intron 25.0%
! TGTTGGAGATATAATTCAAA+TGG - Chr3:70650594-70650613 None:intergenic 25.0%
! TTCATATATAATTGACTGCA+AGG - Chr3:70652943-70652962 None:intergenic 25.0%
!! AATCAAACAAAACACACTTT+TGG - Chr3:70653501-70653520 None:intergenic 25.0%
!! TATAATTTTACCTGTTGCAT+TGG + Chr3:70651546-70651565 MsG0380015471.01.T01:intron 25.0%
!! TCATCATGATTTTCTATAAC+TGG + Chr3:70649659-70649678 MsG0380015471.01.T01:intron 25.0%
!! TCATGCATGTATTTTACTAA+TGG + Chr3:70650627-70650646 MsG0380015471.01.T01:intron 25.0%
!! TGCTTTTCTTACTCTTAATT+AGG + Chr3:70652496-70652515 MsG0380015471.01.T01:intron 25.0%
!! TTGAGTAATGACTTTTACAA+GGG + Chr3:70652412-70652431 MsG0380015471.01.T01:intron 25.0%
!! TTGTTTGTTCAGTTTCTTTT+TGG + Chr3:70649529-70649548 MsG0380015471.01.T01:intron 25.0%
!! TTTGAGTAATGACTTTTACA+AGG + Chr3:70652411-70652430 MsG0380015471.01.T01:intron 25.0%
!!! AGAATCAATTCTAGAATCAA+AGG + Chr3:70650078-70650097 MsG0380015471.01.T01:intron 25.0%
!!! ATCCTTTTTTTAAGTGATTC+AGG - Chr3:70650994-70651013 None:intergenic 25.0%
!!! ATTGATTTTTTTTGCCCTTA+TGG + Chr3:70653414-70653433 MsG0380015471.01.T01:three_prime_UTR 25.0%
!!! CTCACTTTTAATTGTATGTT+TGG + Chr3:70649912-70649931 MsG0380015471.01.T01:intron 25.0%
!!! GGATACTGATTGAAAATTTT+GGG + Chr3:70652005-70652024 MsG0380015471.01.T01:intron 25.0%
!!! TTAGAACACTGTTTTTTAGA+TGG + Chr3:70651656-70651675 MsG0380015471.01.T01:intron 25.0%
AAAAGACGAAAAGGAAAATG+AGG + Chr3:70651053-70651072 MsG0380015471.01.T01:CDS 30.0%
AAAGTGAGTTACATGTAAAG+TGG - Chr3:70649900-70649919 None:intergenic 30.0%
AATCAAAGGCTACAAATTGT+AGG + Chr3:70650092-70650111 MsG0380015471.01.T01:intron 30.0%
ACAAAATGATGCAATCTTAC+AGG + Chr3:70650652-70650671 MsG0380015471.01.T01:intron 30.0%
ACAATGGTAAACTCATATCT+TGG - Chr3:70650393-70650412 None:intergenic 30.0%
ACTCTTGCGTTATAATGTAA+TGG - Chr3:70653361-70653380 None:intergenic 30.0%
ATAACTGGAACATAACTGTT+TGG - Chr3:70652894-70652913 None:intergenic 30.0%
ATGAATCTTCGTCAAATTGT+TGG - Chr3:70650611-70650630 None:intergenic 30.0%
CAAAGTCAATAGAAGATAGT+TGG + Chr3:70653074-70653093 MsG0380015471.01.T01:CDS 30.0%
CAAATGTTTGACGTCTATTA+AGG + Chr3:70650701-70650720 MsG0380015471.01.T01:CDS 30.0%
CACCTGAATCACTTAAAAAA+AGG + Chr3:70650989-70651008 MsG0380015471.01.T01:CDS 30.0%
CATGTAAAGTGGTTTATGTT+TGG - Chr3:70649889-70649908 None:intergenic 30.0%
CTGTACAAAATATATAGCAG+AGG - Chr3:70653338-70653357 None:intergenic 30.0%
CTTAATAGACGTCAAACATT+TGG - Chr3:70650703-70650722 None:intergenic 30.0%
GGTATTTACACGAATATCTA+AGG + Chr3:70653435-70653454 MsG0380015471.01.T01:three_prime_UTR 30.0%
GGTCATAATTCATATCTAAC+TGG + Chr3:70650433-70650452 MsG0380015471.01.T01:CDS 30.0%
TATATAACAAGAAACCTGTG+AGG + Chr3:70651974-70651993 MsG0380015471.01.T01:intron 30.0%
TCTAGACTTGATTCTAACAA+AGG + Chr3:70652470-70652489 MsG0380015471.01.T01:intron 30.0%
TGTTGTATTTATCTCCTTTG+CGG - Chr3:70653270-70653289 None:intergenic 30.0%
TTCTATCTTTAGCAAAACAG+TGG + Chr3:70651248-70651267 MsG0380015471.01.T01:intron 30.0%
TTTAATCCGGTAACAATAAC+AGG - Chr3:70651585-70651604 None:intergenic 30.0%
! AAGGGTGTGAGAATAATTAT+TGG + Chr3:70653454-70653473 MsG0380015471.01.T01:three_prime_UTR 30.0%
! AGTTTCTTCAAGTTTCTCTT+CGG + Chr3:70649387-70649406 MsG0380015471.01.T01:CDS 30.0%
! ATTGATTCTATCTTGAAGCT+AGG + Chr3:70649802-70649821 MsG0380015471.01.T01:intron 30.0%
! ATTTTGTATGTGAGATTGGT+TGG + Chr3:70651210-70651229 MsG0380015471.01.T01:intron 30.0%
! CCAGTTTTCAATAGAAAATC+AGG - Chr3:70652310-70652329 None:intergenic 30.0%
! CCTGATTTTCTATTGAAAAC+TGG + Chr3:70652307-70652326 MsG0380015471.01.T01:CDS 30.0%
! TAGATGGTTAGTCAAACATT+TGG + Chr3:70650919-70650938 MsG0380015471.01.T01:intron 30.0%
! TGAGTAATGACTTTTACAAG+GGG + Chr3:70652413-70652432 MsG0380015471.01.T01:intron 30.0%
! TGTTGATGAAGATGATCTTA+AGG + Chr3:70651271-70651290 MsG0380015471.01.T01:CDS 30.0%
! TTTTTAGATGGCATATCGAA+CGG + Chr3:70651668-70651687 MsG0380015471.01.T01:intron 30.0%
!! CGGATACTGATTGAAAATTT+TGG + Chr3:70652004-70652023 MsG0380015471.01.T01:intron 30.0%
!! CTTTGGAATAAACACATTAC+AGG + Chr3:70651744-70651763 MsG0380015471.01.T01:intron 30.0%
!! GAACTATGTTGGTTTGATAA+TGG + Chr3:70650323-70650342 MsG0380015471.01.T01:intron 30.0%
!! TATAGAGTTAGAGTTGCTTT+TGG + Chr3:70650174-70650193 MsG0380015471.01.T01:intron 30.0%
!! TCTTCTAAGGTTATTACAAC+CGG - Chr3:70650753-70650772 None:intergenic 30.0%
!!! ACGCTGTATGTTTGTTTTTT+CGG - Chr3:70649135-70649154 None:intergenic 30.0%
!!! ATATTTATTTTTGCTGTGGG+TGG + Chr3:70652201-70652220 MsG0380015471.01.T01:intron 30.0%
!!! TCAGTTTCTTTTTGGTGTTA+TGG + Chr3:70649537-70649556 MsG0380015471.01.T01:intron 30.0%
!!! TTTTTAAGTGATTCAGGTGA+AGG - Chr3:70650988-70651007 None:intergenic 30.0%
AAATTCCTTCAAGGTTTCTG+AGG - Chr3:70650965-70650984 None:intergenic 35.0%
AAGATAGTTGGTTACCTTCT+TGG + Chr3:70653086-70653105 MsG0380015471.01.T01:CDS 35.0%
AATCGGTGAAACTATTGTCA+AGG - Chr3:70651630-70651649 None:intergenic 35.0%
AATGTCTTGATACAGCTGAA+AGG - Chr3:70652125-70652144 None:intergenic 35.0%
AGGATCGAAAACCTCATTAA+TGG - Chr3:70652335-70652354 None:intergenic 35.0%
AGTCTAGAGACACTTAATGA+TGG - Chr3:70652458-70652477 None:intergenic 35.0%
ATGTCTATGACCATCAATGA+TGG - Chr3:70649331-70649350 None:intergenic 35.0%
CATACGGAAAAGAAATTGTC+AGG + Chr3:70651474-70651493 MsG0380015471.01.T01:CDS 35.0%
CATGAATAGCAATTAAGCGT+CGG - Chr3:70651352-70651371 None:intergenic 35.0%
CTCAAATCTCAAAGCTGTAA+AGG - Chr3:70652397-70652416 None:intergenic 35.0%
GAAAAAAAGGATTACTCCAG+TGG - Chr3:70649439-70649458 None:intergenic 35.0%
GGATCGAAAACCTCATTAAT+GGG - Chr3:70652334-70652353 None:intergenic 35.0%
GGGTGATTGAATTGGATATA+TGG + Chr3:70650518-70650537 MsG0380015471.01.T01:CDS 35.0%
GGTAAACTTACATTCCATGA+AGG - Chr3:70650573-70650592 None:intergenic 35.0%
GGTGTGAGAATAATTATTGG+TGG + Chr3:70653457-70653476 MsG0380015471.01.T01:three_prime_UTR 35.0%
GTTGTATTTATCTCCTTTGC+GGG - Chr3:70653269-70653288 None:intergenic 35.0%
TGAATATGACATGTCTGAGA+AGG + Chr3:70653171-70653190 MsG0380015471.01.T01:CDS 35.0%
TGATAAACTCTTATGCAGGT+TGG + Chr3:70653013-70653032 MsG0380015471.01.T01:intron 35.0%
TGATGAAGATGATCTTAAGG+AGG + Chr3:70651274-70651293 MsG0380015471.01.T01:CDS 35.0%
TTCGATCCTGTTATTGTTAC+CGG + Chr3:70651576-70651595 MsG0380015471.01.T01:intron 35.0%
TTGAGTATCTTTCATCGTAG+AGG + Chr3:70649351-70649370 MsG0380015471.01.T01:CDS 35.0%
TTTAGGTGATGAAGAAGCTT+GGG + Chr3:70651095-70651114 MsG0380015471.01.T01:CDS 35.0%
! AACCTATCTTAGAGAGCTTT+TGG - Chr3:70652752-70652771 None:intergenic 35.0%
! AATAGTGGAATGTCTCAAAG+TGG + Chr3:70651391-70651410 MsG0380015471.01.T01:CDS 35.0%
! ACCTTCAAAGTAGTTTTCGA+TGG - Chr3:70652370-70652389 None:intergenic 35.0%
! AGATGTGTCTCATTGTGTTT+TGG + Chr3:70653545-70653564 MsG0380015471.01.T01:three_prime_UTR 35.0%
! ATGTCTGAGAAGGATGATTT+TGG + Chr3:70653181-70653200 MsG0380015471.01.T01:CDS 35.0%
! CAAGGAATGTTTAAAGCCAA+TGG + Chr3:70652262-70652281 MsG0380015471.01.T01:CDS 35.0%
! CTGTTTCTTTGTGTGATTTC+AGG + Chr3:70650363-70650382 MsG0380015471.01.T01:intron 35.0%
! GGTAGTCAACTGATGTATTT+TGG - Chr3:70651331-70651350 None:intergenic 35.0%
! TCAATTTTGTCTGCTCCAAA+CGG - Chr3:70649715-70649734 None:intergenic 35.0%
! TTTTGTCTTGACTTTCACTG+TGG + Chr3:70652072-70652091 MsG0380015471.01.T01:intron 35.0%
!! AGCCCTGTTCAATTTTTAGA+TGG + Chr3:70650903-70650922 MsG0380015471.01.T01:intron 35.0%
!! CAAATGATAGAAGCACTGAA+GGG - Chr3:70652984-70653003 None:intergenic 35.0%
!! CAGTGTTCTAAGAAGACAAT+CGG - Chr3:70651647-70651666 None:intergenic 35.0%
!! TCAAATGATAGAAGCACTGA+AGG - Chr3:70652985-70653004 None:intergenic 35.0%
!! TTCCAAAAGCTCTCTAAGAT+AGG + Chr3:70652747-70652766 MsG0380015471.01.T01:intron 35.0%
AAAAGGATTACTCCAGTGGA+AGG - Chr3:70649435-70649454 None:intergenic 40.0%
AAACATTTGGTAAGTGCCAC+AGG - Chr3:70650690-70650709 None:intergenic 40.0%
AAAGAAGTCCCTAGTTTGAG+AGG + Chr3:70651120-70651139 MsG0380015471.01.T01:CDS 40.0%
AAGGACATCAACATCATCCT+TGG - Chr3:70650554-70650573 None:intergenic 40.0%
ACAGATCCAAACATGCACTT+AGG + Chr3:70650262-70650281 MsG0380015471.01.T01:intron 40.0%
ACATCATCCTTGGAGTCATT+AGG - Chr3:70650544-70650563 None:intergenic 40.0%
AGGTGAAGGAAATTCCTTCA+AGG - Chr3:70650974-70650993 None:intergenic 40.0%
AGGTGTTAGGGTGATTGAAT+TGG + Chr3:70650510-70650529 MsG0380015471.01.T01:CDS 40.0%
ATATTGCGAGTGTATCCGAA+AGG + Chr3:70651839-70651858 MsG0380015471.01.T01:CDS 40.0%
ATTCCATTACATTCCCGCAA+AGG + Chr3:70653253-70653272 MsG0380015471.01.T01:CDS 40.0%
CAAGCTTCTTCATCACCTAA+AGG - Chr3:70651096-70651115 None:intergenic 40.0%
CATTCCACTATTCCACCTTT+AGG - Chr3:70651383-70651402 None:intergenic 40.0%
CCTTGAAGCAAAAGACGAAA+AGG + Chr3:70651044-70651063 MsG0380015471.01.T01:CDS 40.0%
CGGTACTATAGCTGATTACA+AGG + Chr3:70651143-70651162 MsG0380015471.01.T01:CDS 40.0%
CTGTATATATGGGAGAAGGA+TGG + Chr3:70652522-70652541 MsG0380015471.01.T01:CDS 40.0%
CTTAGACGTCTCACTTTATC+AGG - Chr3:70651419-70651438 None:intergenic 40.0%
CTTTAGGTGATGAAGAAGCT+TGG + Chr3:70651094-70651113 MsG0380015471.01.T01:CDS 40.0%
GAAAACTGGTCCCATTAATG+AGG + Chr3:70652321-70652340 MsG0380015471.01.T01:CDS 40.0%
GAAAAGGCTGCTGAAACATA+CGG + Chr3:70651458-70651477 MsG0380015471.01.T01:CDS 40.0%
GAAAATGAGGAACCACAGAA+GGG + Chr3:70651066-70651085 MsG0380015471.01.T01:CDS 40.0%
GAAACACAAGCCATCATTGA+TGG + Chr3:70649318-70649337 MsG0380015471.01.T01:CDS 40.0%
GATGATGTTGATGTCCTTCA+TGG + Chr3:70650556-70650575 MsG0380015471.01.T01:CDS 40.0%
GATGGTTGCATTTAACATGC+AGG + Chr3:70651919-70651938 MsG0380015471.01.T01:CDS 40.0%
GCCATCGAAAACTACTTTGA+AGG + Chr3:70652366-70652385 MsG0380015471.01.T01:CDS 40.0%
GTGACTGTATATATGGGAGA+AGG + Chr3:70652518-70652537 MsG0380015471.01.T01:CDS 40.0%
TATATGGCCTAATGACTCCA+AGG + Chr3:70650534-70650553 MsG0380015471.01.T01:CDS 40.0%
TCAACACCTAAGTGCATGTT+TGG - Chr3:70650271-70650290 None:intergenic 40.0%
TGAAGATGATCTTAAGGAGG+AGG + Chr3:70651277-70651296 MsG0380015471.01.T01:CDS 40.0%
TGGTAAAGCTCCTTTATCTC+CGG - Chr3:70649207-70649226 None:intergenic 40.0%
TGTCGTGTTTGATTGCTCTT+GGG + Chr3:70649758-70649777 MsG0380015471.01.T01:intron 40.0%
TTAGGTGATGAAGAAGCTTG+GGG + Chr3:70651096-70651115 MsG0380015471.01.T01:CDS 40.0%
TTCGATGGCAAATGAGCTTT+AGG - Chr3:70652355-70652374 None:intergenic 40.0%
TTGATCCTCTGATTGTTGAC+AGG + Chr3:70651801-70651820 MsG0380015471.01.T01:intron 40.0%
TTGGTTACCTTCTTGGAATG+AGG + Chr3:70653093-70653112 MsG0380015471.01.T01:CDS 40.0%
TTGTCGTGTTTGATTGCTCT+TGG + Chr3:70649757-70649776 MsG0380015471.01.T01:intron 40.0%
! AATGACTTTTACAAGGGGCA+AGG + Chr3:70652418-70652437 MsG0380015471.01.T01:intron 40.0%
! AGATCTCTTTGGTTGATGCA+AGG + Chr3:70652244-70652263 MsG0380015471.01.T01:CDS 40.0%
! ATCATCAAAGCACTTCAGAG+AGG + Chr3:70650490-70650509 MsG0380015471.01.T01:CDS 40.0%
! ATGACTTTTACAAGGGGCAA+GGG + Chr3:70652419-70652438 MsG0380015471.01.T01:intron 40.0%
! CCTTTTCGTCTTTTGCTTCA+AGG - Chr3:70651047-70651066 None:intergenic 40.0%
! CGAAAACTACTTTGAAGGTG+AGG + Chr3:70652371-70652390 MsG0380015471.01.T01:intron 40.0%
! CGCTTAATTGCTATTCATGC+CGG + Chr3:70651353-70651372 MsG0380015471.01.T01:CDS 40.0%
! GCTTAATTGCTATTCATGCC+GGG + Chr3:70651354-70651373 MsG0380015471.01.T01:CDS 40.0%
! GGAATGTTTAAAGCCAATGG+AGG + Chr3:70652265-70652284 MsG0380015471.01.T01:CDS 40.0%
! TCTGAGAAGGATGATTTTGG+AGG + Chr3:70653184-70653203 MsG0380015471.01.T01:CDS 40.0%
! TTTAAAGCCAATGGAGGATG+CGG + Chr3:70652271-70652290 MsG0380015471.01.T01:CDS 40.0%
! TTTGCTTCAAGGTACTCCTT+AGG - Chr3:70651036-70651055 None:intergenic 40.0%
!! CTCTGAAGTGCTTTGATGAT+GGG - Chr3:70650490-70650509 None:intergenic 40.0%
!! GCACTTGAAAAGCACTTGTA+AGG + Chr3:70650196-70650215 MsG0380015471.01.T01:intron 40.0%
!! TCTATGTTTGGTTCTCCGTT+TGG + Chr3:70649697-70649716 MsG0380015471.01.T01:intron 40.0%
!! TCTCTGAAGTGCTTTGATGA+TGG - Chr3:70650491-70650510 None:intergenic 40.0%
!! TCTGAAGTGCTTTGATGATG+GGG - Chr3:70650489-70650508 None:intergenic 40.0%
AACAAAACCGCATCCTCCAT+TGG - Chr3:70652281-70652300 None:intergenic 45.0%
AAGTGAGTCACAGCTCGAAA+AGG + Chr3:70651442-70651461 MsG0380015471.01.T01:CDS 45.0%
ACAAACATGCTTGCCTGTGT+GGG + Chr3:70653207-70653226 MsG0380015471.01.T01:CDS 45.0%
ACCTCCAGACTTCTATGCAA+GGG + Chr3:70652583-70652602 MsG0380015471.01.T01:CDS 45.0%
ACTCCAGTGGAAGGTAAAAG+AGG - Chr3:70649426-70649445 None:intergenic 45.0%
AGGAGTAAGGTGGTCTTCTA+AGG - Chr3:70650766-70650785 None:intergenic 45.0%
AGGGTTATGGGAGATCTCTT+TGG + Chr3:70652233-70652252 MsG0380015471.01.T01:intron 45.0%
ATAGTACCGCCTCTCAAACT+AGG - Chr3:70651132-70651151 None:intergenic 45.0%
CATACCCTTGCATAGAAGTC+TGG - Chr3:70652590-70652609 None:intergenic 45.0%
CCATGCATCCACCCAATTAA+TGG - Chr3:70651893-70651912 None:intergenic 45.0%
CCATTAATTGGGTGGATGCA+TGG + Chr3:70651890-70651909 MsG0380015471.01.T01:CDS 45.0%
CCTCAATCAGAAAGCTTCTC+AGG - Chr3:70649269-70649288 None:intergenic 45.0%
CCTGAGAAGCTTTCTGATTG+AGG + Chr3:70649266-70649285 MsG0380015471.01.T01:CDS 45.0%
CTTCGTTGCGTCAGAATATC+CGG + Chr3:70650731-70650750 MsG0380015471.01.T01:CDS 45.0%
GAAGCCTAAAGGTGGAATAG+TGG + Chr3:70651376-70651395 MsG0380015471.01.T01:CDS 45.0%
GAATCAAGAGCCAATGCAAC+AGG - Chr3:70651559-70651578 None:intergenic 45.0%
GAGGTAATGCGTGTACCTTT+CGG - Chr3:70651857-70651876 None:intergenic 45.0%
GGAAAATGAGGAACCACAGA+AGG + Chr3:70651065-70651084 MsG0380015471.01.T01:CDS 45.0%
GGAGGAAGATTCTGATGAAG+CGG + Chr3:70651295-70651314 MsG0380015471.01.T01:CDS 45.0%
GTAACTAACCTGAGCCACTT+TGG - Chr3:70650799-70650818 None:intergenic 45.0%
GTGAACCTGTCAACAATCAG+AGG - Chr3:70651809-70651828 None:intergenic 45.0%
GTTTAAACTCGGCGTATTGG+AGG + Chr3:70649176-70649195 MsG0380015471.01.T01:CDS 45.0%
TAAAGCTCCTTTATCTCCGG+CGG - Chr3:70649204-70649223 None:intergenic 45.0%
TACCATCGTTACTCCGATGA+AGG + Chr3:70649222-70649241 MsG0380015471.01.T01:CDS 45.0%
TAGTACCGCCTCTCAAACTA+GGG - Chr3:70651131-70651150 None:intergenic 45.0%
TATTCCACCTTTAGGCTTCC+CGG - Chr3:70651375-70651394 None:intergenic 45.0%
TCCTACCTCAGAAACCTTGA+AGG + Chr3:70650957-70650976 MsG0380015471.01.T01:CDS 45.0%
TCGAACACCTCATTCCAAGA+AGG - Chr3:70653103-70653122 None:intergenic 45.0%
TCTCCTTTGCGGGAATGTAA+TGG - Chr3:70653259-70653278 None:intergenic 45.0%
TCTTGACTTTCACTGTGGTG+AGG + Chr3:70652077-70652096 MsG0380015471.01.T01:intron 45.0%
TGGTTCTTTGGCAGGGTTAT+GGG + Chr3:70652221-70652240 MsG0380015471.01.T01:intron 45.0%
TGTCATAATCCCGCCTTCAT+CGG - Chr3:70649238-70649257 None:intergenic 45.0%
! AGTGGCTCAGGTTAGTTACT+TGG + Chr3:70650800-70650819 MsG0380015471.01.T01:intron 45.0%
! CTTATGCAGGTTGGAATTGC+TGG + Chr3:70653022-70653041 MsG0380015471.01.T01:intron 45.0%
!! AAGCACTTCAGAGAGGTGTT+AGG + Chr3:70650497-70650516 MsG0380015471.01.T01:CDS 45.0%
!! AGCACTTCAGAGAGGTGTTA+GGG + Chr3:70650498-70650517 MsG0380015471.01.T01:CDS 45.0%
!! CTGAAGTGCTTTGATGATGG+GGG - Chr3:70650488-70650507 None:intergenic 45.0%
!! TCCTTCAAGGTTTCTGAGGT+AGG - Chr3:70650961-70650980 None:intergenic 45.0%
!! TTTTGCTGTGGGTGGTTCTT+TGG + Chr3:70652209-70652228 MsG0380015471.01.T01:intron 45.0%
!! TATTAAATTCAATTTATAAA+TGG + Chr3:70649605-70649624 MsG0380015471.01.T01:intron 5.0%
ACCCTTGCATAGAAGTCTGG+AGG - Chr3:70652587-70652606 None:intergenic 50.0%
ATCGTTACTCCGATGAAGGC+GGG + Chr3:70649226-70649245 MsG0380015471.01.T01:CDS 50.0%
ATTCATGCCGGGAAGCCTAA+AGG + Chr3:70651365-70651384 MsG0380015471.01.T01:CDS 50.0%
CACCTCCAGACTTCTATGCA+AGG + Chr3:70652582-70652601 MsG0380015471.01.T01:CDS 50.0%
CATATCAACCAAGCCGCCTA+AGG + Chr3:70651017-70651036 MsG0380015471.01.T01:CDS 50.0%
CATCGTTACTCCGATGAAGG+CGG + Chr3:70649225-70649244 MsG0380015471.01.T01:CDS 50.0%
CCACAGAAGGGAAAGCCTTT+AGG + Chr3:70651078-70651097 MsG0380015471.01.T01:CDS 50.0%
CCACCTTACTCCTGATCTTC+AGG + Chr3:70650773-70650792 MsG0380015471.01.T01:CDS 50.0%
CCACTTCTTAGTTCCCACAC+AGG - Chr3:70653223-70653242 None:intergenic 50.0%
CCAGTGGAAGGTAAAAGAGG+AGG - Chr3:70649423-70649442 None:intergenic 50.0%
CCTAAAGGCTTTCCCTTCTG+TGG - Chr3:70651081-70651100 None:intergenic 50.0%
CCTGAAGATCAGGAGTAAGG+TGG - Chr3:70650776-70650795 None:intergenic 50.0%
CCTGTGTGGGAACTAAGAAG+TGG + Chr3:70653220-70653239 MsG0380015471.01.T01:CDS 50.0%
CGAATTCCCGCTTTCTGTTC+CGG + Chr3:70653120-70653139 MsG0380015471.01.T01:CDS 50.0%
CGGATATTCTGACGCAACGA+AGG - Chr3:70650733-70650752 None:intergenic 50.0%
CGGGTTTAAACTCGGCGTAT+TGG + Chr3:70649173-70649192 MsG0380015471.01.T01:CDS 50.0%
GAAACCTGTGAGGTCTAGCA+CGG + Chr3:70651984-70652003 MsG0380015471.01.T01:intron 50.0%
GAAGTCCCTAGTTTGAGAGG+CGG + Chr3:70651123-70651142 MsG0380015471.01.T01:CDS 50.0%
GACAAACATGCTTGCCTGTG+TGG + Chr3:70653206-70653225 MsG0380015471.01.T01:CDS 50.0%
GTGGTTCTTTGGCAGGGTTA+TGG + Chr3:70652220-70652239 MsG0380015471.01.T01:intron 50.0%
TCCTGATCTTCAGGCCAAAG+TGG + Chr3:70650782-70650801 MsG0380015471.01.T01:CDS 50.0%
TGGCCTGAAGATCAGGAGTA+AGG - Chr3:70650779-70650798 None:intergenic 50.0%
! ACAGCGTATGTTTCTGCTGC+CGG + Chr3:70649148-70649167 MsG0380015471.01.T01:CDS 50.0%
! CCTCCTCTTTTACCTTCCAC+TGG + Chr3:70649420-70649439 MsG0380015471.01.T01:CDS 50.0%
! GCTTCAAGGTACTCCTTAGG+CGG - Chr3:70651033-70651052 None:intergenic 50.0%
CAGGACATTGACGACTCCTG+TGG + Chr3:70650671-70650690 MsG0380015471.01.T01:intron 55.0%
CGCCTTCATCGGAGTAACGA+TGG - Chr3:70649227-70649246 None:intergenic 55.0%
CTGTGGGTGGTTCTTTGGCA+GGG + Chr3:70652214-70652233 MsG0380015471.01.T01:intron 55.0%
GTATCCGTGCTAGACCTCAC+AGG - Chr3:70651991-70652010 None:intergenic 55.0%
GTGGATGCATGGAGCTCAGA+TGG + Chr3:70651901-70651920 MsG0380015471.01.T01:CDS 55.0%
TCTTCAGGCCAAAGTGGCTC+AGG + Chr3:70650788-70650807 MsG0380015471.01.T01:CDS 55.0%
! AAGGTACTCCTTAGGCGGCT+TGG - Chr3:70651028-70651047 None:intergenic 55.0%
! GCCACTTTGGCCTGAAGATC+AGG - Chr3:70650786-70650805 None:intergenic 55.0%
CATGCCGGGAAGCCTAAAGG+TGG + Chr3:70651368-70651387 MsG0380015471.01.T01:CDS 60.0%
CCAGCTCCGGAACAGAAAGC+GGG - Chr3:70653129-70653148 None:intergenic 60.0%
GCCAGCTCCGGAACAGAAAG+CGG - Chr3:70653130-70653149 None:intergenic 60.0%
GCTGTGGGTGGTTCTTTGGC+AGG + Chr3:70652213-70652232 MsG0380015471.01.T01:intron 60.0%
TGCCGGCGCGGGTTTAAACT+CGG + Chr3:70649165-70649184 MsG0380015471.01.T01:CDS 60.0%
! GTATGTTTCTGCTGCCGGCG+CGG + Chr3:70649153-70649172 MsG0380015471.01.T01:CDS 60.0%
! TATGTTTCTGCTGCCGGCGC+GGG + Chr3:70649154-70649173 MsG0380015471.01.T01:CDS 60.0%
ATGCGAAGCAGCGCCAGCTC+CGG - Chr3:70653142-70653161 None:intergenic 65.0%
CCCGCTTTCTGTTCCGGAGC+TGG + Chr3:70653126-70653145 MsG0380015471.01.T01:CDS 65.0%
CGCCGAGTTTAAACCCGCGC+CGG - Chr3:70649170-70649189 None:intergenic 65.0%
!! GGAGGCACCGCCGGAGATAA+AGG + Chr3:70649194-70649213 MsG0380015471.01.T01:CDS 65.0%
!! CGGCGTATTGGAGGCACCGC+CGG + Chr3:70649185-70649204 MsG0380015471.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 70649069 70653573 70649069 ID=MsG0380015471.01;Name=MsG0380015471.01
Chr3 mRNA 70649069 70653573 70649069 ID=MsG0380015471.01.T01;Parent=MsG0380015471.01;Name=MsG0380015471.01.T01;_AED=0.43;_eAED=0.43;_QI=51|1|1|1|1|1|9|249|595
Chr3 exon 70649069 70649443 70649069 ID=MsG0380015471.01.T01:exon:13871;Parent=MsG0380015471.01.T01
Chr3 exon 70650385 70650581 70650385 ID=MsG0380015471.01.T01:exon:13872;Parent=MsG0380015471.01.T01
Chr3 exon 70650674 70650809 70650674 ID=MsG0380015471.01.T01:exon:13873;Parent=MsG0380015471.01.T01
Chr3 exon 70650922 70651164 70650922 ID=MsG0380015471.01.T01:exon:13874;Parent=MsG0380015471.01.T01
Chr3 exon 70651260 70651495 70651260 ID=MsG0380015471.01.T01:exon:13875;Parent=MsG0380015471.01.T01
Chr3 exon 70651823 70651940 70651823 ID=MsG0380015471.01.T01:exon:13876;Parent=MsG0380015471.01.T01
Chr3 exon 70652235 70652387 70652235 ID=MsG0380015471.01.T01:exon:13877;Parent=MsG0380015471.01.T01
Chr3 exon 70652518 70652604 70652518 ID=MsG0380015471.01.T01:exon:13878;Parent=MsG0380015471.01.T01
Chr3 exon 70653031 70653573 70653031 ID=MsG0380015471.01.T01:exon:13879;Parent=MsG0380015471.01.T01
Chr3 five_prime_UTR 70649069 70649119 70649069 ID=MsG0380015471.01.T01:five_prime_utr;Parent=MsG0380015471.01.T01
Chr3 CDS 70649120 70649443 70649120 ID=MsG0380015471.01.T01:cds;Parent=MsG0380015471.01.T01
Chr3 CDS 70650385 70650581 70650385 ID=MsG0380015471.01.T01:cds;Parent=MsG0380015471.01.T01
Chr3 CDS 70650674 70650809 70650674 ID=MsG0380015471.01.T01:cds;Parent=MsG0380015471.01.T01
Chr3 CDS 70650922 70651164 70650922 ID=MsG0380015471.01.T01:cds;Parent=MsG0380015471.01.T01
Chr3 CDS 70651260 70651495 70651260 ID=MsG0380015471.01.T01:cds;Parent=MsG0380015471.01.T01
Chr3 CDS 70651823 70651940 70651823 ID=MsG0380015471.01.T01:cds;Parent=MsG0380015471.01.T01
Chr3 CDS 70652235 70652387 70652235 ID=MsG0380015471.01.T01:cds;Parent=MsG0380015471.01.T01
Chr3 CDS 70652518 70652604 70652518 ID=MsG0380015471.01.T01:cds;Parent=MsG0380015471.01.T01
Chr3 CDS 70653031 70653324 70653031 ID=MsG0380015471.01.T01:cds;Parent=MsG0380015471.01.T01
Chr3 three_prime_UTR 70653325 70653573 70653325 ID=MsG0380015471.01.T01:three_prime_utr;Parent=MsG0380015471.01.T01
Gene Sequence

>MsG0380015471.01.T01

ATGGCTTCTAAACCGAAAAAACAAACATACAGCGTATGTTTCTGCTGCCGGCGCGGGTTTAAACTCGGCGTATTGGAGGCACCGCCGGAGATAAAGGAGCTTTACCATCGTTACTCCGATGAAGGCGGGATTATGACAGCATCTCACCTGAGAAGCTTTCTGATTGAGGTGCAGAAAGAAGAGAAAATCACAGAAGAAGAAACACAAGCCATCATTGATGGTCATAGACATTTGAGTATCTTTCATCGTAGAGGTCTTAATCTTGAAAGTTTCTTCAAGTTTCTCTTCGGTGATGATAATCCTCCTCTTTTACCTTCCACTGGAGTGCACCAAGATATGAGTTTACCATTGTCACATTATTATATATTCACTGGTCATAATTCATATCTAACTGGAAATCAGCTCAGTAGTGACTGCAGTGATGCCCCCATCATCAAAGCACTTCAGAGAGGTGTTAGGGTGATTGAATTGGATATATGGCCTAATGACTCCAAGGATGATGTTGATGTCCTTCATGGAATGACATTGACGACTCCTGTGGCACTTACCAAATGTTTGACGTCTATTAAGGAGTATGCCTTCGTTGCGTCAGAATATCCGGTTGTAATAACCTTAGAAGACCACCTTACTCCTGATCTTCAGGCCAAAGTGGCTCAGATGGTTAGTCAAACATTTGGAGACATACTGTTTTGTCCTACCTCAGAAACCTTGAAGGAATTTCCTTCACCTGAATCACTTAAAAAAAGGATTATCATATCAACCAAGCCGCCTAAGGAGTACCTTGAAGCAAAAGACGAAAAGGAAAATGAGGAACCACAGAAGGGAAAGCCTTTAGGTGATGAAGAAGCTTGGGGCAAAGAAGTCCCTAGTTTGAGAGGCGGTACTATAGCTGATTACAAGCAAAACAGTGGTGTTGATGAAGATGATCTTAAGGAGGAGGAAGATTCTGATGAAGCGGAAAAGTCACGCCAAAATACATCAGTTGACTACCGACGCTTAATTGCTATTCATGCCGGGAAGCCTAAAGGTGGAATAGTGGAATGTCTCAAAGTGGAGCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGTCACAGCTCGAAAAGGCTGCTGAAACATACGGAAAAGAAATTGTCAGGTTCACTCAGCAGAATATATTGCGAGTGTATCCGAAAGGTACACGCATTACCTCATCAAATTATAATCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGTTATGGGAGATCTCTTTGGTTGATGCAAGGAATGTTTAAAGCCAATGGAGGATGCGGTTTTGTTAAAAAACCTGATTTTCTATTGAAAACTGGTCCCATTAATGAGGTTTTCGATCCTAAAGCTCATTTGCCATCGAAAACTACTTTGAAGGTGACTGTATATATGGGAGAAGGATGGTATTATGATTTCAAGCATACACATTTTGATCAATTCTCACCTCCAGACTTCTATGCAAGGGTTGGAATTGCTGGAGTCCCTTTTGATACTGTTATGAAAAAAACAAAGTCAATAGAAGATAGTTGGTTACCTTCTTGGAATGAGGTGTTCGAATTCCCGCTTTCTGTTCCGGAGCTGGCGCTGCTTCGCATAGAAGTTCATGAATATGACATGTCTGAGAAGGATGATTTTGGAGGACAAACATGCTTGCCTGTGTGGGAACTAAGAAGTGGAATTCGAGCAATTCCATTACATTCCCGCAAAGGAGATAAATACAACAATGTAAAGCTTCTCATGCGCTTTGAATTCATCTGA
Protein sequence

>MsG0380015471.01.T01

MASKPKKQTYSVCFCCRRGFKLGVLEAPPEIKELYHRYSDEGGIMTASHLRSFLIEVQKEEKITEEETQAIIDGHRHLSIFHRRGLNLESFFKFLFGDDNPPLLPSTGVHQDMSLPLSHYYIFTGHNSYLTGNQLSSDCSDAPIIKALQRGVRVIELDIWPNDSKDDVDVLHGMTLTTPVALTKCLTSIKEYAFVASEYPVVITLEDHLTPDLQAKVAQMVSQTFGDILFCPTSETLKEFPSPESLKKRIIISTKPPKEYLEAKDEKENEEPQKGKPLGDEEAWGKEVPSLRGGTIADYKQNSGVDEDDLKEEEDSDEAEKSRQNTSVDYRRLIAIHAGKPKGGIVECLKVEPDKVRRLSLSESQLEKAAETYGKEIVRFTQQNILRVYPKGTRITSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGFVKKPDFLLKTGPINEVFDPKAHLPSKTTLKVTVYMGEGWYYDFKHTHFDQFSPPDFYARVGIAGVPFDTVMKKTKSIEDSWLPSWNEVFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVWELRSGIRAIPLHSRKGDKYNNVKLLMRFEFI*