AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015382.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015382.01.T01 MTR_3g069280 95.280 572 12 1 1 557 1 572 0.0 1122
MsG0380015382.01.T01 MTR_3g070720 89.580 595 22 4 1 557 1 593 0.0 983
MsG0380015382.01.T01 MTR_5g082620 72.474 574 132 6 7 556 17 588 0.0 853
MsG0380015382.01.T01 MTR_3g070720 88.978 499 15 4 1 461 1 497 0.0 791
MsG0380015382.01.T01 MTR_3g070720 91.209 455 15 3 1 432 1 453 0.0 738
MsG0380015382.01.T01 MTR_5g071010 59.831 590 198 8 2 557 10 594 0.0 705
MsG0380015382.01.T01 MTR_5g082590 58.059 577 194 9 14 556 19 581 0.0 660
MsG0380015382.01.T01 MTR_3g070720 90.670 418 14 3 1 395 1 416 0.0 657
MsG0380015382.01.T01 MTR_5g082580 49.167 600 244 12 6 556 19 606 0.0 556
MsG0380015382.01.T01 MTR_3g070710 48.630 584 255 10 6 556 15 586 0.0 540
MsG0380015382.01.T01 MTR_3g070560 49.220 577 250 9 12 556 22 587 0.0 538
MsG0380015382.01.T01 MTR_5g071040 49.481 578 238 10 2 556 26 572 0.0 524
MsG0380015382.01.T01 MTR_3g070560 52.143 420 178 5 152 556 3 414 4.40e-147 430
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015382.01.T01 AT3G08510 66.839 579 160 7 2 557 12 581 0.0 791
MsG0380015382.01.T01 AT3G08510 66.839 579 160 7 2 557 12 581 0.0 791
MsG0380015382.01.T01 AT3G55940 64.706 578 177 7 2 557 12 584 0.0 746
MsG0380015382.01.T01 AT3G08510 65.071 564 166 8 2 557 12 552 0.0 734
MsG0380015382.01.T01 AT3G08510 65.071 564 166 8 2 557 12 552 0.0 734
MsG0380015382.01.T01 AT5G58700 55.461 586 221 9 6 557 18 597 0.0 642
MsG0380015382.01.T01 AT5G58700 55.461 586 221 9 6 557 18 597 0.0 642
MsG0380015382.01.T01 AT2G40116 57.348 558 193 8 30 556 69 612 0.0 632
MsG0380015382.01.T01 AT5G58700 61.633 490 166 5 86 557 4 489 0.0 616
MsG0380015382.01.T01 AT5G58690 50.600 583 222 8 13 557 24 578 0.0 576
MsG0380015382.01.T01 AT5G58690 50.600 583 222 8 13 557 24 578 0.0 576
MsG0380015382.01.T01 AT5G58690 50.600 583 222 8 13 557 5 559 0.0 575
MsG0380015382.01.T01 AT5G58670 49.562 571 227 5 11 554 20 556 0.0 540
MsG0380015382.01.T01 AT4G38530 47.130 575 250 8 3 554 12 555 1.22e-176 511
MsG0380015382.01.T01 AT3G47290 38.824 510 236 10 63 556 81 530 4.44e-115 352
MsG0380015382.01.T01 AT3G47290 38.690 504 230 11 63 550 81 521 2.39e-111 343
MsG0380015382.01.T01 AT3G47220 35.034 588 284 12 2 556 8 530 1.95e-106 330

Find 149 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATTATAATCCATTAAT+TGG 0.072901 3:-69342014 MsG0380015382.01.T01:CDS
AGGATCGAAAACCTCATTAT+TGG 0.216160 3:+69341593 None:intergenic
CAAATGTTTGACGTCTATTA+AGG 0.230837 3:-69343283 MsG0380015382.01.T01:CDS
CCATGCATCCACCCAATTAA+TGG 0.240859 3:+69342002 None:intergenic
TAATTAGGTCACTGTATATA+TGG 0.245203 3:-69341422 MsG0380015382.01.T01:intron
TGGTTCTTTGGCAGGGTTAT+GGG 0.259926 3:-69341704 MsG0380015382.01.T01:intron
GGTGCTGACTTTGGCCAAAA+AGG 0.261231 3:+69340490 None:intergenic
TGTAGTCATCTGATGCATTT+TGG 0.262746 3:+69342656 None:intergenic
GTGGTTCTTTGGCAGGGTTA+TGG 0.264327 3:-69341705 MsG0380015382.01.T01:intron
CTTAGACGTCTCACTTTATC+AGG 0.266369 3:+69342568 None:intergenic
ATAATAGTTGGATGCCTTCT+TGG 0.270038 3:-69340847 MsG0380015382.01.T01:CDS
CCCGCTTTCTGTTCCGGAGC+TGG 0.275180 3:-69340807 MsG0380015382.01.T01:CDS
CTTATGCAGGTTGGAATTGC+TGG 0.289356 3:-69340911 MsG0380015382.01.T01:intron
CAAGTGGGGAGGTGATAAAT+AGG 0.305677 3:+69340546 None:intergenic
TGAATTCCCGCTTTCTGTTC+CGG 0.306917 3:-69340813 MsG0380015382.01.T01:CDS
AGGGTTATGGGAGATCTCTT+TGG 0.311117 3:-69341692 MsG0380015382.01.T01:CDS
CATCTGATGCAAGTTAAAAT+AGG 0.325145 3:-69340615 MsG0380015382.01.T01:exon
GGATCGAAAACCTCATTATT+GGG 0.335505 3:+69341594 None:intergenic
CTCTGAAGTGCTTCGATGAT+GGG 0.355533 3:+69343497 None:intergenic
CCACCTTACTCCTGATCTTC+AGG 0.370917 3:-69343211 MsG0380015382.01.T01:CDS
GGTCATAATTCATATCTAAC+TGG 0.373291 3:-69343551 MsG0380015382.01.T01:CDS
TAGATGGTTACTCAAACATT+TGG 0.373406 3:-69343065 MsG0380015382.01.T01:CDS
TCACAGAAGGGAAAGCCTTT+AGG 0.380419 3:-69342906 MsG0380015382.01.T01:CDS
ATGTCTGAGAAGGATGATTT+TGG 0.381957 3:-69340752 MsG0380015382.01.T01:CDS
TATATGGCCTAATGACTCTA+AGG 0.383342 3:-69343450 MsG0380015382.01.T01:CDS
CATTCCACTATTCCACCTTT+AGG 0.387588 3:+69342604 None:intergenic
GCCACTTTGGCCTGAAGATC+AGG 0.391390 3:+69343201 None:intergenic
CGCTTAATTGCTATTCATGC+TGG 0.391854 3:-69342631 MsG0380015382.01.T01:CDS
AGGAGTAAGGTGGTCTTCTA+AGG 0.392968 3:+69343221 None:intergenic
GAGTGATTGAATTGGATATA+TGG 0.394919 3:-69343466 MsG0380015382.01.T01:CDS
GGAGGCACCGCCGGAGATAA+AGG 0.402355 3:-69344570 MsG0380015382.01.T01:CDS
TTTAGGTGATGAAGAAGCTT+GGG 0.407451 3:-69342889 MsG0380015382.01.T01:CDS
TCTCTGAAGTGCTTCGATGA+TGG 0.421908 3:+69343496 None:intergenic
ACGAGTACAAATATGTGTTA+TGG 0.424472 3:+69340449 None:intergenic
AGGTGTTAGAGTGATTGAAT+TGG 0.428703 3:-69343474 MsG0380015382.01.T01:CDS
CTTTGTTGCGTCTGAATATC+CGG 0.433810 3:-69343253 MsG0380015382.01.T01:CDS
ACCTCCCCACTTGAGATACT+TGG 0.439420 3:-69340536 MsG0380015382.01.T01:three_prime_UTR
CAAAGTCAACAGATAATAGT+TGG 0.440108 3:-69340859 MsG0380015382.01.T01:CDS
CATACCCTTGCATAGAAGTC+TGG 0.448430 3:+69341346 None:intergenic
TCTCCTTCGCGGGAATGTAA+TGG 0.452778 3:+69340677 None:intergenic
GATGATGTTGATGTCCTTCA+TGG 0.454017 3:-69343428 MsG0380015382.01.T01:CDS
TCTTCTAAGGTTATTACAAC+CGG 0.454332 3:+69343234 None:intergenic
CAAATTATAATCCATTAATT+GGG 0.455647 3:-69342013 MsG0380015382.01.T01:CDS
ATGCGAAGCAGCGCCAGCTC+CGG 0.456222 3:+69340794 None:intergenic
CATATGGAAAAGAAATTGTC+AGG 0.456553 3:-69342510 MsG0380015382.01.T01:intron
AGATTCCGATGAAGCGGAAA+AGG 0.459147 3:-69342683 MsG0380015382.01.T01:CDS
CCTTGAAGCTAAAGAAGAAA+AGG 0.464912 3:-69342940 MsG0380015382.01.T01:CDS
AAATCATGCTTGGAAAGTTA+AGG 0.464924 3:+69340380 None:intergenic
AAGGTACTCCTTAGGCGGCT+TGG 0.465613 3:+69342959 None:intergenic
GAAAAGGCTGCTGAAACATA+TGG 0.467059 3:-69342526 MsG0380015382.01.T01:CDS
ATAGTACCGCCTCTCAAACT+AGG 0.474142 3:+69342855 None:intergenic
GAGGTAATGCGTGTACCTTT+CGG 0.479808 3:+69342038 None:intergenic
AGCTAAAGAAGAAAAGGAAA+AGG 0.484145 3:-69342934 MsG0380015382.01.T01:CDS
AACAAAACCGCATCCTCCAT+TGG 0.486065 3:+69341647 None:intergenic
CCATTAATTGGGTGGATGCA+TGG 0.487420 3:-69342002 MsG0380015382.01.T01:CDS
TATCATCGTTACTCCGATGA+AGG 0.489870 3:-69344542 MsG0380015382.01.T01:CDS
TCTTCAGGCCAAAGTGGCTC+AGG 0.489930 3:-69343196 MsG0380015382.01.T01:intron
TCACATTATTACATATTCAC+TGG 0.491218 3:-69343572 MsG0380015382.01.T01:CDS
AATTAGGTCACTGTATATAT+GGG 0.492839 3:-69341421 MsG0380015382.01.T01:intron
GATGGTTGCATTTAACATGC+AGG 0.494100 3:-69341973 MsG0380015382.01.T01:intron
CAAGCTTCTTCATCACCTAA+AGG 0.494465 3:+69342891 None:intergenic
ATAGGGTGTATATTTGCAAA+TGG 0.495055 3:+69340564 None:intergenic
CTTTAGGTGATGAAGAAGCT+TGG 0.501759 3:-69342890 MsG0380015382.01.T01:CDS
TAAAGAAGAAAAGGAAAAGG+AGG 0.506940 3:-69342931 MsG0380015382.01.T01:CDS
ATGCAAGATGGTGCTGACTT+TGG 0.509067 3:+69340481 None:intergenic
TGTCGATGAAGATGATCTTA+AGG 0.513054 3:-69342713 MsG0380015382.01.T01:CDS
AAGTGGGGAGGTGATAAATA+GGG 0.513511 3:+69340547 None:intergenic
GAAAACTGGTCCCAATAATG+AGG 0.515061 3:-69341604 MsG0380015382.01.T01:intron
CGGTACTATAGCTGATTACA+AGG 0.516593 3:-69342841 MsG0380015382.01.T01:intron
GTTGTATTTATCTCCTTCGC+GGG 0.517351 3:+69340667 None:intergenic
ATCGTTACTCCGATGAAGGC+GGG 0.518193 3:-69344538 MsG0380015382.01.T01:CDS
CAGCGTATCGGAGGCACCGC+CGG 0.519501 3:-69344579 MsG0380015382.01.T01:CDS
CAAGGAATGTTTAAAGCCAA+TGG 0.521167 3:-69341663 MsG0380015382.01.T01:CDS
GTAACTAACCTGAGCCACTT+TGG 0.521221 3:+69343188 None:intergenic
GAAGCCTAAAGGTGGAATAG+TGG 0.523615 3:-69342608 MsG0380015382.01.T01:CDS
TTAGCTTCAAGGTACTCCTT+AGG 0.524662 3:+69342951 None:intergenic
TCTGAAGTGCTTCGATGATG+GGG 0.528251 3:+69343498 None:intergenic
AAGATCTCCACGATCAATGA+TGG 0.528390 3:+69344436 None:intergenic
TGGCCTGAAGATCAGGAGTA+AGG 0.530572 3:+69343208 None:intergenic
TGTCATGATCCCGCCTTCAT+CGG 0.531322 3:+69344529 None:intergenic
CATATCAACCAAGCCGCCTA+AGG 0.532591 3:-69342967 MsG0380015382.01.T01:CDS
TTGGATGCCTTCTTGGAATG+AGG 0.533729 3:-69340840 MsG0380015382.01.T01:CDS
TCCTTCGAGGTTTCTGAGGT+AGG 0.535636 3:+69343026 None:intergenic
TGTTGTATTTATCTCCTTCG+CGG 0.535824 3:+69340666 None:intergenic
ATTATAATCCATTAATTGGG+TGG 0.536189 3:-69342010 MsG0380015382.01.T01:CDS
GGAAAAGGAGGAATCACAGA+AGG 0.541089 3:-69342919 MsG0380015382.01.T01:CDS
TTTAAAGCCAATGGAGGATG+CGG 0.547215 3:-69341654 MsG0380015382.01.T01:CDS
CATGACAATAGATAATAAAG+TGG 0.548639 3:-69340409 MsG0380015382.01.T01:three_prime_UTR
ATTCATGCTGGGAAGCCTAA+AGG 0.548804 3:-69342619 MsG0380015382.01.T01:CDS
GCCAGCTCCGGAACAGAAAG+CGG 0.549635 3:+69340806 None:intergenic
AAGTGAGTCACAGCTCGAAA+AGG 0.551984 3:-69342542 MsG0380015382.01.T01:CDS
AGAAAGCCAAGTATCTCAAG+TGG 0.555526 3:+69340530 None:intergenic
CCAGCTCCGGAACAGAAAGC+GGG 0.556338 3:+69340807 None:intergenic
GCTTAATTGCTATTCATGCT+GGG 0.557069 3:-69342630 MsG0380015382.01.T01:CDS
CTTCAATCAGAAAGCTTCTG+AGG 0.557081 3:+69344498 None:intergenic
TGATAAAGCTCCTTTATCTC+CGG 0.557185 3:+69344560 None:intergenic
TAGTACCGCCTCTCAAACTA+GGG 0.558608 3:+69342856 None:intergenic
TGAAGATGATCTTAAGGAGG+AGG 0.558834 3:-69342707 MsG0380015382.01.T01:CDS
ACAATGGTAAACTCATATCT+TGG 0.558961 3:+69343594 None:intergenic
TAATGGATTATAATTTGATG+AGG 0.561590 3:+69342019 None:intergenic
GTGGATGCATGGAGCTCAGA+TGG 0.561990 3:-69341991 MsG0380015382.01.T01:CDS
ACCCCAGTGGAAGGTAAAAG+AGG 0.562878 3:+69344368 None:intergenic
ACATCATCCTTAGAGTCATT+AGG 0.562946 3:+69343443 None:intergenic
TCCTGATCTTCAGGCCAAAG+TGG 0.568046 3:-69343202 MsG0380015382.01.T01:CDS
CATCGTTACTCCGATGAAGG+CGG 0.573076 3:-69344539 MsG0380015382.01.T01:CDS
CCTGTGTGGGAACTAAGAAA+CGG 0.577952 3:-69340713 MsG0380015382.01.T01:CDS
ATCTCCAGACTTCTATGCAA+GGG 0.579812 3:-69341350 MsG0380015382.01.T01:intron
GCTTCAAGGTACTCCTTAGG+CGG 0.582171 3:+69342954 None:intergenic
CGGATATTCAGACGCAACAA+AGG 0.583069 3:+69343254 None:intergenic
AGATCTCTTTGGTTGATGCA+AGG 0.584104 3:-69341681 MsG0380015382.01.T01:CDS
CTGAAGTGCTTCGATGATGG+GGG 0.585163 3:+69343499 None:intergenic
GTCACTGTATATATGGGAGA+AGG 0.587116 3:-69341415 MsG0380015382.01.T01:CDS
TCAAATACCTCATTCCAAGA+AGG 0.587279 3:+69340833 None:intergenic
CATCTCCAGACTTCTATGCA+AGG 0.588070 3:-69341351 MsG0380015382.01.T01:CDS
AGGTGAAAGAAATTCCTTCG+AGG 0.590767 3:+69343013 None:intergenic
AAGAGGATTACCCCAGTGGA+AGG 0.591185 3:+69344359 None:intergenic
GGAGGAAGATTCCGATGAAG+CGG 0.594226 3:-69342689 MsG0380015382.01.T01:CDS
GTTCCATTACATTCCCGCGA+AGG 0.594715 3:-69340680 MsG0380015382.01.T01:CDS
GGTAAACATACATTCCATGA+AGG 0.597062 3:+69343414 None:intergenic
TTCTATCTTTAGCAAAACAG+TGG 0.603639 3:-69342736 MsG0380015382.01.T01:intron
GAAAAGGAGGAATCACAGAA+GGG 0.605582 3:-69342918 MsG0380015382.01.T01:CDS
CGATGAAGATGATCTTAAGG+AGG 0.606898 3:-69342710 MsG0380015382.01.T01:CDS
AAAGAAGTCCCTAGTTTGAG+AGG 0.608524 3:-69342864 MsG0380015382.01.T01:CDS
AAACATTTGATAAGTGCCAC+AGG 0.609405 3:+69343297 None:intergenic
AAATTCCTTCGAGGTTTCTG+AGG 0.611142 3:+69343022 None:intergenic
GAAAGCCAAGTATCTCAAGT+GGG 0.618638 3:+69340531 None:intergenic
AATATGTAATAATGTGACAA+TGG 0.622860 3:+69343578 None:intergenic
CCGTTTCTTAGTTCCCACAC+AGG 0.623175 3:+69340713 None:intergenic
TGGAACTTAAAGATGCAAGA+TGG 0.627322 3:+69340469 None:intergenic
CTGTATATATGGGAGAAGGA+TGG 0.631132 3:-69341411 MsG0380015382.01.T01:CDS
ACAAACATGCTTACCTGTGT+GGG 0.631770 3:-69340726 MsG0380015382.01.T01:CDS
TGAATATGACATGTCTGAGA+AGG 0.639315 3:-69340762 MsG0380015382.01.T01:CDS
CAGGACATTGACGACTCCTG+TGG 0.642402 3:-69343313 MsG0380015382.01.T01:CDS
TAAAGCTCCTTTATCTCCGG+CGG 0.645354 3:+69344563 None:intergenic
ACACAAGCCATCATTGATCG+TGG 0.646149 3:-69344443 MsG0380015382.01.T01:CDS
GCCAAGTATCTCAAGTGGGG+AGG 0.648452 3:+69340535 None:intergenic
TTAGGTGATGAAGAAGCTTG+GGG 0.654802 3:-69342888 MsG0380015382.01.T01:CDS
TCCTACCTCAGAAACCTCGA+AGG 0.659294 3:-69343027 MsG0380015382.01.T01:CDS
AATAGTGGAATGTCTCAAAG+TGG 0.664523 3:-69342593 MsG0380015382.01.T01:CDS
GACAAACATGCTTACCTGTG+TGG 0.665048 3:-69340727 MsG0380015382.01.T01:CDS
CCAGTGGAAGGTAAAAGAGG+AGG 0.668421 3:+69344371 None:intergenic
CCTGAAGATCAGGAGTAAGG+TGG 0.674793 3:+69343211 None:intergenic
GGAATGTTTAAAGCCAATGG+AGG 0.677096 3:-69341660 MsG0380015382.01.T01:CDS
CATGCTGGGAAGCCTAAAGG+TGG 0.677747 3:-69342616 MsG0380015382.01.T01:CDS
ATATTGCGAGTGTATCCGAA+AGG 0.679225 3:-69342053 MsG0380015382.01.T01:CDS
GAAGTCCCTAGTTTGAGAGG+CGG 0.688180 3:-69342861 MsG0380015382.01.T01:CDS
AAAGCCAAGTATCTCAAGTG+GGG 0.694884 3:+69340532 None:intergenic
GTAAAAGAGGATTACCCCAG+TGG 0.701192 3:+69344355 None:intergenic
ATCATCGAAGCACTTCAGAG+AGG 0.734048 3:-69343494 MsG0380015382.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTATTTCAATAACAA+AGG + Chr3:69343879-69343898 None:intergenic 10.0%
!!! ATTTTTAGATAAATCAATTT+TGG + Chr3:69341138-69341157 None:intergenic 10.0%
!!! TTTTTAGATAAATCAATTTT+GGG + Chr3:69341137-69341156 None:intergenic 10.0%
!! CAAATTATAATCCATTAATT+GGG - Chr3:69342983-69343002 MsG0380015382.01.T01:CDS 15.0%
!! TCAAATAAAATAATTCATAC+AGG + Chr3:69343700-69343719 None:intergenic 15.0%
!! TCAAATTATAATCCATTAAT+TGG - Chr3:69342982-69343001 MsG0380015382.01.T01:CDS 15.0%
!! TGTAACTCATAATATATATT+GGG - Chr3:69340702-69340721 MsG0380015382.01.T01:CDS 15.0%
!! TTGTAACTCATAATATATAT+TGG - Chr3:69340701-69340720 MsG0380015382.01.T01:CDS 15.0%
!! TTTGATTATGAGTTATTAAA+CGG + Chr3:69342683-69342702 None:intergenic 15.0%
!!! TAAGATTTAAGATGATTTAT+GGG - Chr3:69343674-69343693 MsG0380015382.01.T01:intron 15.0%
!!! TTTTAGATAAATCAATTTTG+GGG + Chr3:69341136-69341155 None:intergenic 15.0%
!! AAAATGCCAAACATAATTTA+TGG - Chr3:69341153-69341172 MsG0380015382.01.T01:intron 20.0%
!! AATATGTAATAATGTGACAA+TGG + Chr3:69341421-69341440 None:intergenic 20.0%
!! AATGTTGTATATAAATTGCA+AGG - Chr3:69342192-69342211 MsG0380015382.01.T01:intron 20.0%
!! CGAAGAATTAGAAAAATATA+TGG + Chr3:69343985-69344004 None:intergenic 20.0%
!! GAATTACATTAAATGTAAAG+TGG + Chr3:69340904-69340923 None:intergenic 20.0%
!! TATCTCATATTTCTTTAATC+CGG + Chr3:69342610-69342629 None:intergenic 20.0%
!!! AACCATCTAAAATTTGAATA+GGG + Chr3:69341920-69341939 None:intergenic 20.0%
!!! ATTTAATTTAATAGCCAACA+AGG + Chr3:69340666-69340685 None:intergenic 20.0%
!!! CTAAGATTTAAGATGATTTA+TGG - Chr3:69343673-69343692 MsG0380015382.01.T01:intron 20.0%
!!! GTAATTTTTATGAACTATGT+TGG - Chr3:69341322-69341341 MsG0380015382.01.T01:intron 20.0%
!!! TAACCATCTAAAATTTGAAT+AGG + Chr3:69341921-69341940 None:intergenic 20.0%
!!! TAATGGATTATAATTTGATG+AGG + Chr3:69342980-69342999 None:intergenic 20.0%
!!! TTTTCATAACAGTATCAAAA+GGG + Chr3:69344114-69344133 None:intergenic 20.0%
!!! TTTTTCATAACAGTATCAAA+AGG + Chr3:69344115-69344134 None:intergenic 20.0%
! AAATATATGGATGCTATAAC+TGG + Chr3:69343972-69343991 None:intergenic 25.0%
! AATGTAAAGTGGTTTATGTT+TGG + Chr3:69340893-69340912 None:intergenic 25.0%
! AATTAGGTCACTGTATATAT+GGG - Chr3:69343575-69343594 MsG0380015382.01.T01:CDS 25.0%
! ATGAGATAAATATTTGTCCT+TGG - Chr3:69342622-69342641 MsG0380015382.01.T01:CDS 25.0%
! ATTATAATCCATTAATTGGG+TGG - Chr3:69342986-69343005 MsG0380015382.01.T01:CDS 25.0%
! ATTTATCTTCGTCAAATTGT+TGG + Chr3:69341623-69341642 None:intergenic 25.0%
! CATGACAATAGATAATAAAG+TGG - Chr3:69344587-69344606 MsG0380015382.01.T01:CDS 25.0%
! CATTTATATTCAATCAGCTT+TGG - Chr3:69342831-69342850 MsG0380015382.01.T01:intron 25.0%
! GTTGTCATTAGTAAAATACA+TGG + Chr3:69341646-69341665 None:intergenic 25.0%
! TAATTAGGTCACTGTATATA+TGG - Chr3:69343574-69343593 MsG0380015382.01.T01:CDS 25.0%
! TAATTGATAAACTCTTATGC+AGG - Chr3:69344072-69344091 MsG0380015382.01.T01:intron 25.0%
! TCACATTATTACATATTCAC+TGG - Chr3:69341424-69341443 MsG0380015382.01.T01:intron 25.0%
! TGTTGGAGATATAATTCAAA+CGG + Chr3:69341606-69341625 None:intergenic 25.0%
! TTTAATCCGGTAACAATAAA+AGG + Chr3:69342597-69342616 None:intergenic 25.0%
! TTTCCAACTTGACAAAATAA+CGG - Chr3:69342719-69342738 MsG0380015382.01.T01:CDS 25.0%
!! TAGATAAAGTGATTTGTGTT+TGG - Chr3:69341006-69341025 MsG0380015382.01.T01:intron 25.0%
!! TATAATTTTACCTGTTGCAT+TGG - Chr3:69342558-69342577 MsG0380015382.01.T01:CDS 25.0%
!! TCTAATTTTGTATGTGAGAT+TGG - Chr3:69342218-69342237 MsG0380015382.01.T01:intron 25.0%
!! TGCTTTTCTTACTCTTAATT+AGG - Chr3:69343559-69343578 MsG0380015382.01.T01:CDS 25.0%
!! TTAATGGACGAAAATGATAT+CGG - Chr3:69342768-69342787 MsG0380015382.01.T01:intron 25.0%
!! TTCAATCCTTTTATTGTTAC+CGG - Chr3:69342588-69342607 MsG0380015382.01.T01:CDS 25.0%
!! TTTTGTCTTGAATTTCTCTT+TGG - Chr3:69343173-69343192 MsG0380015382.01.T01:intron 25.0%
!!! ATCCTTTTTTTAAGTGAATC+AGG + Chr3:69342006-69342025 None:intergenic 25.0%
!!! ATGATATATTATTTTGCCGT+GGG - Chr3:69343269-69343288 MsG0380015382.01.T01:CDS 25.0%
!!! TATGATATATTATTTTGCCG+TGG - Chr3:69343268-69343287 MsG0380015382.01.T01:CDS 25.0%
!!! TTCACTTTTAAGTGTATGTT+TGG - Chr3:69340921-69340940 MsG0380015382.01.T01:intron 25.0%
!!! TTTAACTTACATTCCCTTTT+TGG - Chr3:69344492-69344511 MsG0380015382.01.T01:CDS 25.0%
AACCTATATTAGAGAGCTTA+TGG + Chr3:69343815-69343834 None:intergenic 30.0%
AATAAGTGATAACTTCCCTT+CGG - Chr3:69344029-69344048 MsG0380015382.01.T01:intron 30.0%
ACAAAATGATGCAATCTTAC+AGG - Chr3:69341664-69341683 MsG0380015382.01.T01:CDS 30.0%
ACAATGGTAAACTCATATCT+TGG + Chr3:69341405-69341424 None:intergenic 30.0%
ACGAGTACAAATATGTGTTA+TGG + Chr3:69344550-69344569 None:intergenic 30.0%
ACGGCTACTAATTGAAAATT+TGG - Chr3:69343104-69343123 MsG0380015382.01.T01:intron 30.0%
AGCTAAAGAAGAAAAGGAAA+AGG - Chr3:69342062-69342081 MsG0380015382.01.T01:CDS 30.0%
ATAACTGGAACATAACTGTT+TGG + Chr3:69343957-69343976 None:intergenic 30.0%
ATAGGGTGTATATTTGCAAA+TGG + Chr3:69344435-69344454 None:intergenic 30.0%
ATTAAGCTGAAAACAGCTTA+TGG + Chr3:69343791-69343810 None:intergenic 30.0%
CAAAGTCAACAGATAATAGT+TGG - Chr3:69344137-69344156 MsG0380015382.01.T01:intron 30.0%
CAAATGTTTGACGTCTATTA+AGG - Chr3:69341713-69341732 MsG0380015382.01.T01:intron 30.0%
CACCTGATTCACTTAAAAAA+AGG - Chr3:69342001-69342020 MsG0380015382.01.T01:CDS 30.0%
CATATGGAAAAGAAATTGTC+AGG - Chr3:69342486-69342505 MsG0380015382.01.T01:intron 30.0%
CATCTGATGCAAGTTAAAAT+AGG - Chr3:69344381-69344400 MsG0380015382.01.T01:CDS 30.0%
CGGCTACTAATTGAAAATTT+GGG - Chr3:69343105-69343124 MsG0380015382.01.T01:intron 30.0%
CTCTAGACTTGATTATAACA+AGG - Chr3:69343533-69343552 MsG0380015382.01.T01:CDS 30.0%
GAGTGATTGAATTGGATATA+TGG - Chr3:69341530-69341549 MsG0380015382.01.T01:intron 30.0%
GGCTACTAATTGAAAATTTG+GGG - Chr3:69343106-69343125 MsG0380015382.01.T01:intron 30.0%
GGTCATAATTCATATCTAAC+TGG - Chr3:69341445-69341464 MsG0380015382.01.T01:intron 30.0%
TAAAGAAGAAAAGGAAAAGG+AGG - Chr3:69342065-69342084 MsG0380015382.01.T01:CDS 30.0%
TAAATATTTGTCCTTGGCAA+TGG - Chr3:69342628-69342647 MsG0380015382.01.T01:CDS 30.0%
TAGATGGTTACTCAAACATT+TGG - Chr3:69341931-69341950 MsG0380015382.01.T01:intron 30.0%
TATATAACAAGAAACCTGTG+AGG - Chr3:69343075-69343094 MsG0380015382.01.T01:intron 30.0%
TCGACTCCATAAATTATGTT+TGG + Chr3:69341162-69341181 None:intergenic 30.0%
TTCCATAAGCTCTCTAATAT+AGG - Chr3:69343810-69343829 MsG0380015382.01.T01:intron 30.0%
TTCTATCTTTAGCAAAACAG+TGG - Chr3:69342260-69342279 MsG0380015382.01.T01:intron 30.0%
! AGAATCAATTCTAGAAGCAA+AGG - Chr3:69341072-69341091 MsG0380015382.01.T01:intron 30.0%
! ATTTTGTATGTGAGATTGGT+TGG - Chr3:69342222-69342241 MsG0380015382.01.T01:intron 30.0%
! CCAGTTTTCAATAGAAAATC+AGG + Chr3:69343381-69343400 None:intergenic 30.0%
! CCTGATTTTCTATTGAAAAC+TGG - Chr3:69343378-69343397 MsG0380015382.01.T01:intron 30.0%
! GTAGACAAAATTGGTTTAAG+AGG - Chr3:69340790-69340809 MsG0380015382.01.T01:CDS 30.0%
! TTGAGTAGTGACTTTTACAA+GGG - Chr3:69343482-69343501 MsG0380015382.01.T01:CDS 30.0%
! TTTGAGTAGTGACTTTTACA+AGG - Chr3:69343481-69343500 MsG0380015382.01.T01:CDS 30.0%
!! ACTTTTAAGTGTATGTTTGG+TGG - Chr3:69340924-69340943 MsG0380015382.01.T01:intron 30.0%
!! ATCTACAACTCACTTTTAGT+CGG + Chr3:69340991-69341010 None:intergenic 30.0%
!! TCTTCTAAGGTTATTACAAC+CGG + Chr3:69341765-69341784 None:intergenic 30.0%
!! TTTCCGTTATTTTGTCAAGT+TGG + Chr3:69342725-69342744 None:intergenic 30.0%
!!! AATAGGTGTTGTTGCTTTTA+AGG - Chr3:69344398-69344417 MsG0380015382.01.T01:CDS 30.0%
AAACATTTGATAAGTGCCAC+AGG + Chr3:69341702-69341721 None:intergenic 35.0%
AAGCAAAGGCTACAAATAGT+AGG - Chr3:69341086-69341105 MsG0380015382.01.T01:intron 35.0%
AATAGCCAACAAGGTAAAAG+AGG + Chr3:69340657-69340676 None:intergenic 35.0%
AATGTCTTGATACAGCTGAA+AGG + Chr3:69343226-69343245 None:intergenic 35.0%
ACATCATCCTTAGAGTCATT+AGG + Chr3:69341556-69341575 None:intergenic 35.0%
ACGAAAACAGCTTATAAGCA+AGG - Chr3:69343835-69343854 MsG0380015382.01.T01:intron 35.0%
AGGATCGAAAACCTCATTAT+TGG + Chr3:69343406-69343425 None:intergenic 35.0%
AGGTGTTAGAGTGATTGAAT+TGG - Chr3:69341522-69341541 MsG0380015382.01.T01:intron 35.0%
ATAATAGTTGGATGCCTTCT+TGG - Chr3:69344149-69344168 MsG0380015382.01.T01:intron 35.0%
CCTTGAAGCTAAAGAAGAAA+AGG - Chr3:69342056-69342075 MsG0380015382.01.T01:CDS 35.0%
GGATCGAAAACCTCATTATT+GGG + Chr3:69343405-69343424 None:intergenic 35.0%
GGTAAACATACATTCCATGA+AGG + Chr3:69341585-69341604 None:intergenic 35.0%
TATATGGCCTAATGACTCTA+AGG - Chr3:69341546-69341565 MsG0380015382.01.T01:intron 35.0%
TCAAATACCTCATTCCAAGA+AGG + Chr3:69344166-69344185 None:intergenic 35.0%
TCTTGAATTTCTCTTTGGTG+AGG - Chr3:69343178-69343197 MsG0380015382.01.T01:intron 35.0%
TGAATATGACATGTCTGAGA+AGG - Chr3:69344234-69344253 MsG0380015382.01.T01:intron 35.0%
TGATAAACTCTTATGCAGGT+TGG - Chr3:69344076-69344095 MsG0380015382.01.T01:intron 35.0%
TGATAAAGCTCCTTTATCTC+CGG + Chr3:69340439-69340458 None:intergenic 35.0%
TGCCATCAAAACTACTTTGA+AGG - Chr3:69343436-69343455 MsG0380015382.01.T01:CDS 35.0%
TGGAACTTAAAGATGCAAGA+TGG + Chr3:69344530-69344549 None:intergenic 35.0%
TGTCGATGAAGATGATCTTA+AGG - Chr3:69342283-69342302 MsG0380015382.01.T01:intron 35.0%
TGTTGTATTTATCTCCTTCG+CGG + Chr3:69344333-69344352 None:intergenic 35.0%
TTATAGTAGCTGACAGTTGA+TGG - Chr3:69341894-69341913 MsG0380015382.01.T01:intron 35.0%
TTTAGGTGATGAAGAAGCTT+GGG - Chr3:69342107-69342126 MsG0380015382.01.T01:intron 35.0%
! AATAGTGGAATGTCTCAAAG+TGG - Chr3:69342403-69342422 MsG0380015382.01.T01:intron 35.0%
! ACTATGTTGGTGTCTGATAA+TGG - Chr3:69341335-69341354 MsG0380015382.01.T01:intron 35.0%
! ATGTCTGAGAAGGATGATTT+TGG - Chr3:69344244-69344263 MsG0380015382.01.T01:intron 35.0%
! CAAGGAATGTTTAAAGCCAA+TGG - Chr3:69343333-69343352 MsG0380015382.01.T01:intron 35.0%
! CTGTTTCTTTGTGTGATTTC+AGG - Chr3:69341375-69341394 MsG0380015382.01.T01:CDS 35.0%
! GCTTAATTGCTATTCATGCT+GGG - Chr3:69342366-69342385 MsG0380015382.01.T01:intron 35.0%
! GGCCCTATTCAAATTTTAGA+TGG - Chr3:69341915-69341934 MsG0380015382.01.T01:intron 35.0%
! GTAATCCTCTTTTACCTTGT+TGG - Chr3:69340649-69340668 MsG0380015382.01.T01:CDS 35.0%
! TCAAAACTACTTTGAAGGTG+AGG - Chr3:69343441-69343460 MsG0380015382.01.T01:CDS 35.0%
! TGTAGTCATCTGATGCATTT+TGG + Chr3:69342343-69342362 None:intergenic 35.0%
! TTTGATGGCAAATGAGCTTT+AGG + Chr3:69343426-69343445 None:intergenic 35.0%
!! ATATATTATTTTGCCGTGGG+TGG - Chr3:69343272-69343291 MsG0380015382.01.T01:CDS 35.0%
!! CCTTTTCTTCTTTAGCTTCA+AGG + Chr3:69342059-69342078 None:intergenic 35.0%
!! GCACTTGAAAAGCACTTATA+AGG - Chr3:69341192-69341211 MsG0380015382.01.T01:intron 35.0%
!!! CACCTTCAAAGTAGTTTTGA+TGG + Chr3:69343441-69343460 None:intergenic 35.0%
AAAGAAGTCCCTAGTTTGAG+AGG - Chr3:69342132-69342151 MsG0380015382.01.T01:intron 40.0%
AAAGCCAAGTATCTCAAGTG+GGG + Chr3:69344467-69344486 None:intergenic 40.0%
AAATTCCTTCGAGGTTTCTG+AGG + Chr3:69341977-69341996 None:intergenic 40.0%
AAGATCTCCACGATCAATGA+TGG + Chr3:69340563-69340582 None:intergenic 40.0%
AAGTGGGGAGGTGATAAATA+GGG + Chr3:69344452-69344471 None:intergenic 40.0%
ACAAACATGCTTACCTGTGT+GGG - Chr3:69344270-69344289 MsG0380015382.01.T01:intron 40.0%
ACCGAAAAAACACAGCGTAT+CGG - Chr3:69340405-69340424 MsG0380015382.01.T01:three_prime_UTR 40.0%
AGAAAGCCAAGTATCTCAAG+TGG + Chr3:69344469-69344488 None:intergenic 40.0%
AGGTGAAAGAAATTCCTTCG+AGG + Chr3:69341986-69342005 None:intergenic 40.0%
ATATTGCGAGTGTATCCGAA+AGG - Chr3:69342943-69342962 MsG0380015382.01.T01:CDS 40.0%
ATCTCCAGACTTCTATGCAA+GGG - Chr3:69343646-69343665 MsG0380015382.01.T01:intron 40.0%
ATGCCATCTAAGAAGACAGT+CGG + Chr3:69342659-69342678 None:intergenic 40.0%
CAAGCTTCTTCATCACCTAA+AGG + Chr3:69342108-69342127 None:intergenic 40.0%
CATTCCACTATTCCACCTTT+AGG + Chr3:69342395-69342414 None:intergenic 40.0%
CGAAACGCAGAAACAAACAT+AGG + Chr3:69340769-69340788 None:intergenic 40.0%
CGATGAAGATGATCTTAAGG+AGG - Chr3:69342286-69342305 MsG0380015382.01.T01:intron 40.0%
CGGTACTATAGCTGATTACA+AGG - Chr3:69342155-69342174 MsG0380015382.01.T01:intron 40.0%
CTCAAATCTCAAAGCCGTAA+AGG + Chr3:69343467-69343486 None:intergenic 40.0%
CTGTATATATGGGAGAAGGA+TGG - Chr3:69343585-69343604 MsG0380015382.01.T01:CDS 40.0%
CTTAGACGTCTCACTTTATC+AGG + Chr3:69342431-69342450 None:intergenic 40.0%
CTTCAATCAGAAAGCTTCTG+AGG + Chr3:69340501-69340520 None:intergenic 40.0%
CTTTAGGTGATGAAGAAGCT+TGG - Chr3:69342106-69342125 MsG0380015382.01.T01:intron 40.0%
CTTTGTTGCGTCTGAATATC+CGG - Chr3:69341743-69341762 MsG0380015382.01.T01:intron 40.0%
GAAAACTGGTCCCAATAATG+AGG - Chr3:69343392-69343411 MsG0380015382.01.T01:intron 40.0%
GAAAAGGAGGAATCACAGAA+GGG - Chr3:69342078-69342097 MsG0380015382.01.T01:intron 40.0%
GAAAAGGCTGCTGAAACATA+TGG - Chr3:69342470-69342489 MsG0380015382.01.T01:intron 40.0%
GAAAGCCAAGTATCTCAAGT+GGG + Chr3:69344468-69344487 None:intergenic 40.0%
GATGATGTTGATGTCCTTCA+TGG - Chr3:69341568-69341587 MsG0380015382.01.T01:intron 40.0%
GATGGTTGCATTTAACATGC+AGG - Chr3:69343023-69343042 MsG0380015382.01.T01:CDS 40.0%
GTCACTGTATATATGGGAGA+AGG - Chr3:69343581-69343600 MsG0380015382.01.T01:CDS 40.0%
GTCTAGAGACACTTGAATGA+CGG + Chr3:69343521-69343540 None:intergenic 40.0%
GTTGTATTTATCTCCTTCGC+GGG + Chr3:69344332-69344351 None:intergenic 40.0%
TATCATCGTTACTCCGATGA+AGG - Chr3:69340454-69340473 MsG0380015382.01.T01:three_prime_UTR 40.0%
TCAACACTCAAGTGCATGTT+TGG + Chr3:69341281-69341300 None:intergenic 40.0%
TGAAGATGATCTTAAGGAGG+AGG - Chr3:69342289-69342308 MsG0380015382.01.T01:intron 40.0%
TGGACGAAAATGATATCGGA+CGG - Chr3:69342772-69342791 MsG0380015382.01.T01:intron 40.0%
TTAGGTGATGAAGAAGCTTG+GGG - Chr3:69342108-69342127 MsG0380015382.01.T01:intron 40.0%
TTGATCCTCTGATTGTTGAC+AGG - Chr3:69342905-69342924 MsG0380015382.01.T01:CDS 40.0%
! AGATCTCTTTGGTTGATGCA+AGG - Chr3:69343315-69343334 MsG0380015382.01.T01:intron 40.0%
! CGCTTAATTGCTATTCATGC+TGG - Chr3:69342365-69342384 MsG0380015382.01.T01:intron 40.0%
! GCGTTTCGAGTAGACAAAAT+TGG - Chr3:69340781-69340800 MsG0380015382.01.T01:CDS 40.0%
! GGAATGTTTAAAGCCAATGG+AGG - Chr3:69343336-69343355 MsG0380015382.01.T01:intron 40.0%
! TCTGAGAAGGATGATTTTGG+TGG - Chr3:69344247-69344266 MsG0380015382.01.T01:intron 40.0%
! TTAGCTTCAAGGTACTCCTT+AGG + Chr3:69342048-69342067 None:intergenic 40.0%
! TTTAAAGCCAATGGAGGATG+CGG - Chr3:69343342-69343361 MsG0380015382.01.T01:intron 40.0%
! TTTTCAATTAGTAGCCGTGC+TGG + Chr3:69343102-69343121 None:intergenic 40.0%
!! AGAAATGATAGAAGCACCGA+AGG + Chr3:69344048-69344067 None:intergenic 40.0%
!! CTTTGGAACAAACACATTGC+AGG - Chr3:69342848-69342867 MsG0380015382.01.T01:CDS 40.0%
!! GAAATGATAGAAGCACCGAA+GGG + Chr3:69344047-69344066 None:intergenic 40.0%
!! TTATGGAGTCGAGTTGCTTT+TGG - Chr3:69341170-69341189 MsG0380015382.01.T01:intron 40.0%
!!! TCCGATACGCTGTGTTTTTT+CGG + Chr3:69340409-69340428 None:intergenic 40.0%
AACAAAACCGCATCCTCCAT+TGG + Chr3:69343352-69343371 None:intergenic 45.0%
AAGTGAGTCACAGCTCGAAA+AGG - Chr3:69342454-69342473 MsG0380015382.01.T01:intron 45.0%
ACACAAGCCATCATTGATCG+TGG - Chr3:69340553-69340572 MsG0380015382.01.T01:three_prime_UTR 45.0%
AGATTCCGATGAAGCGGAAA+AGG - Chr3:69342313-69342332 MsG0380015382.01.T01:intron 45.0%
AGGAGTAAGGTGGTCTTCTA+AGG + Chr3:69341778-69341797 None:intergenic 45.0%
AGGGTTATGGGAGATCTCTT+TGG - Chr3:69343304-69343323 MsG0380015382.01.T01:CDS 45.0%
ATAGTACCGCCTCTCAAACT+AGG + Chr3:69342144-69342163 None:intergenic 45.0%
ATTCATGCTGGGAAGCCTAA+AGG - Chr3:69342377-69342396 MsG0380015382.01.T01:intron 45.0%
CAAGTGCATGTTTGGATCTG+CGG + Chr3:69341273-69341292 None:intergenic 45.0%
CAAGTGGGGAGGTGATAAAT+AGG + Chr3:69344453-69344472 None:intergenic 45.0%
CATACCCTTGCATAGAAGTC+TGG + Chr3:69343653-69343672 None:intergenic 45.0%
CATCTCCAGACTTCTATGCA+AGG - Chr3:69343645-69343664 MsG0380015382.01.T01:intron 45.0%
CCATGCATCCACCCAATTAA+TGG + Chr3:69342997-69343016 None:intergenic 45.0%
CCATTAATTGGGTGGATGCA+TGG - Chr3:69342994-69343013 MsG0380015382.01.T01:CDS 45.0%
CCTGTGTGGGAACTAAGAAA+CGG - Chr3:69344283-69344302 MsG0380015382.01.T01:intron 45.0%
CGGATATTCAGACGCAACAA+AGG + Chr3:69341745-69341764 None:intergenic 45.0%
GAAAAAACACAGCGTATCGG+AGG - Chr3:69340408-69340427 MsG0380015382.01.T01:three_prime_UTR 45.0%
GAAGCCTAAAGGTGGAATAG+TGG - Chr3:69342388-69342407 MsG0380015382.01.T01:intron 45.0%
GAATCAAGAGCCAATGCAAC+AGG + Chr3:69342571-69342590 None:intergenic 45.0%
GACAAACATGCTTACCTGTG+TGG - Chr3:69344269-69344288 MsG0380015382.01.T01:intron 45.0%
GAGGTAATGCGTGTACCTTT+CGG + Chr3:69342961-69342980 None:intergenic 45.0%
GGAAAAGGAGGAATCACAGA+AGG - Chr3:69342077-69342096 MsG0380015382.01.T01:intron 45.0%
GTAAAAGAGGATTACCCCAG+TGG + Chr3:69340644-69340663 None:intergenic 45.0%
GTAACTAACCTGAGCCACTT+TGG + Chr3:69341811-69341830 None:intergenic 45.0%
GTGAACCTGTCAACAATCAG+AGG + Chr3:69342913-69342932 None:intergenic 45.0%
TAAAGCTCCTTTATCTCCGG+CGG + Chr3:69340436-69340455 None:intergenic 45.0%
TAGTACCGCCTCTCAAACTA+GGG + Chr3:69342143-69342162 None:intergenic 45.0%
TCACAGAAGGGAAAGCCTTT+AGG - Chr3:69342090-69342109 MsG0380015382.01.T01:intron 45.0%
TGAATTCCCGCTTTCTGTTC+CGG - Chr3:69344183-69344202 MsG0380015382.01.T01:intron 45.0%
TGGTTCTTTGGCAGGGTTAT+GGG - Chr3:69343292-69343311 MsG0380015382.01.T01:CDS 45.0%
TTGGATGCCTTCTTGGAATG+AGG - Chr3:69344156-69344175 MsG0380015382.01.T01:intron 45.0%
! AGTGGCTCAGGTTAGTTACT+AGG - Chr3:69341812-69341831 MsG0380015382.01.T01:intron 45.0%
! ATCATCGAAGCACTTCAGAG+AGG - Chr3:69341502-69341521 MsG0380015382.01.T01:intron 45.0%
! CTCCTCTTTTACCTTCCACT+GGG - Chr3:69340626-69340645 MsG0380015382.01.T01:exon 45.0%
! CTTATGCAGGTTGGAATTGC+TGG - Chr3:69344085-69344104 MsG0380015382.01.T01:intron 45.0%
! CTTTGAAGGTGAGGCCTTTA+CGG - Chr3:69343450-69343469 MsG0380015382.01.T01:CDS 45.0%
! TCACCGACTGTCTTCTTAGA+TGG - Chr3:69342653-69342672 MsG0380015382.01.T01:CDS 45.0%
! TCCTCTTTTACCTTCCACTG+GGG - Chr3:69340627-69340646 MsG0380015382.01.T01:exon 45.0%
! TCTGAAGTGCTTCGATGATG+GGG + Chr3:69341501-69341520 None:intergenic 45.0%
!! ATGCAAGATGGTGCTGACTT+TGG + Chr3:69344518-69344537 None:intergenic 45.0%
!! CTCTGAAGTGCTTCGATGAT+GGG + Chr3:69341502-69341521 None:intergenic 45.0%
!! GTGCTGACTTTGGCCAAAAA+GGG + Chr3:69344508-69344527 None:intergenic 45.0%
!! TCTCTGAAGTGCTTCGATGA+TGG + Chr3:69341503-69341522 None:intergenic 45.0%
!! AGTAATTAAATATTATTTAA+TGG - Chr3:69342752-69342771 MsG0380015382.01.T01:intron 5.0%
!!! TATTAAATTAAATTTGTTAA+TGG - Chr3:69340673-69340692 MsG0380015382.01.T01:CDS 5.0%
AAGAGGATTACCCCAGTGGA+AGG + Chr3:69340640-69340659 None:intergenic 50.0%
ACCCCAGTGGAAGGTAAAAG+AGG + Chr3:69340631-69340650 None:intergenic 50.0%
ACCTCCCCACTTGAGATACT+TGG - Chr3:69344460-69344479 MsG0380015382.01.T01:CDS 50.0%
AGTCGGTGAAACCATTGCCA+AGG + Chr3:69342642-69342661 None:intergenic 50.0%
ATCGTTACTCCGATGAAGGC+GGG - Chr3:69340458-69340477 MsG0380015382.01.T01:three_prime_UTR 50.0%
CATATCAACCAAGCCGCCTA+AGG - Chr3:69342029-69342048 MsG0380015382.01.T01:CDS 50.0%
CATCGTTACTCCGATGAAGG+CGG - Chr3:69340457-69340476 MsG0380015382.01.T01:three_prime_UTR 50.0%
CCACCTTACTCCTGATCTTC+AGG - Chr3:69341785-69341804 MsG0380015382.01.T01:intron 50.0%
CCAGTGGAAGGTAAAAGAGG+AGG + Chr3:69340628-69340647 None:intergenic 50.0%
CCGTTTCTTAGTTCCCACAC+AGG + Chr3:69344286-69344305 None:intergenic 50.0%
CCTGAAGATCAGGAGTAAGG+TGG + Chr3:69341788-69341807 None:intergenic 50.0%
GAAGTCCCTAGTTTGAGAGG+CGG - Chr3:69342135-69342154 MsG0380015382.01.T01:intron 50.0%
GACGTGTTTGCGTTGCTCTT+GGG - Chr3:69340828-69340847 MsG0380015382.01.T01:CDS 50.0%
GGAGGAAGATTCCGATGAAG+CGG - Chr3:69342307-69342326 MsG0380015382.01.T01:intron 50.0%
GTGGTTCTTTGGCAGGGTTA+TGG - Chr3:69343291-69343310 MsG0380015382.01.T01:CDS 50.0%
GTTCCATTACATTCCCGCGA+AGG - Chr3:69344316-69344335 MsG0380015382.01.T01:intron 50.0%
TCCTACCTCAGAAACCTCGA+AGG - Chr3:69341969-69341988 MsG0380015382.01.T01:intron 50.0%
TCCTGATCTTCAGGCCAAAG+TGG - Chr3:69341794-69341813 MsG0380015382.01.T01:intron 50.0%
TCTCCTTCGCGGGAATGTAA+TGG + Chr3:69344322-69344341 None:intergenic 50.0%
TGACGTGTTTGCGTTGCTCT+TGG - Chr3:69340827-69340846 MsG0380015382.01.T01:CDS 50.0%
TGGCCTGAAGATCAGGAGTA+AGG + Chr3:69341791-69341810 None:intergenic 50.0%
TGTCATGATCCCGCCTTCAT+CGG + Chr3:69340470-69340489 None:intergenic 50.0%
! CCTCCTCTTTTACCTTCCAC+TGG - Chr3:69340625-69340644 MsG0380015382.01.T01:exon 50.0%
! CTGAAGTGCTTCGATGATGG+GGG + Chr3:69341500-69341519 None:intergenic 50.0%
! GCTTCAAGGTACTCCTTAGG+CGG + Chr3:69342045-69342064 None:intergenic 50.0%
! TTTTGCCGTGGGTGGTTCTT+TGG - Chr3:69343280-69343299 MsG0380015382.01.T01:CDS 50.0%
!! GGTGCTGACTTTGGCCAAAA+AGG + Chr3:69344509-69344528 None:intergenic 50.0%
!! TCCTTCGAGGTTTCTGAGGT+AGG + Chr3:69341973-69341992 None:intergenic 50.0%
CAGGACATTGACGACTCCTG+TGG - Chr3:69341683-69341702 MsG0380015382.01.T01:CDS 55.0%
CATGCTGGGAAGCCTAAAGG+TGG - Chr3:69342380-69342399 MsG0380015382.01.T01:intron 55.0%
GAAACCTGTGAGGTCCAGCA+CGG - Chr3:69343085-69343104 MsG0380015382.01.T01:intron 55.0%
GCCAAGTATCTCAAGTGGGG+AGG + Chr3:69344464-69344483 None:intergenic 55.0%
GTGGATGCATGGAGCTCAGA+TGG - Chr3:69343005-69343024 MsG0380015382.01.T01:CDS 55.0%
TCTTCAGGCCAAAGTGGCTC+AGG - Chr3:69341800-69341819 MsG0380015382.01.T01:intron 55.0%
! AAGGTACTCCTTAGGCGGCT+TGG + Chr3:69342040-69342059 None:intergenic 55.0%
! GCCACTTTGGCCTGAAGATC+AGG + Chr3:69341798-69341817 None:intergenic 55.0%
! GCGTGCCTTTTCCGCTTCAT+CGG + Chr3:69342321-69342340 None:intergenic 55.0%
CCAGCTCCGGAACAGAAAGC+GGG + Chr3:69344192-69344211 None:intergenic 60.0%
CCCTGCCAAAGAACCACCCA+CGG + Chr3:69343288-69343307 None:intergenic 60.0%
CCGTGGGTGGTTCTTTGGCA+GGG - Chr3:69343285-69343304 MsG0380015382.01.T01:CDS 60.0%
GCCAGCTCCGGAACAGAAAG+CGG + Chr3:69344193-69344212 None:intergenic 60.0%
ATGCGAAGCAGCGCCAGCTC+CGG + Chr3:69344205-69344224 None:intergenic 65.0%
CCCGCTTTCTGTTCCGGAGC+TGG - Chr3:69344189-69344208 MsG0380015382.01.T01:intron 65.0%
GCCGTGGGTGGTTCTTTGGC+AGG - Chr3:69343284-69343303 MsG0380015382.01.T01:CDS 65.0%
GTAGCCGTGCTGGACCTCAC+AGG + Chr3:69343092-69343111 None:intergenic 65.0%
!! GGAGGCACCGCCGGAGATAA+AGG - Chr3:69340426-69340445 MsG0380015382.01.T01:three_prime_UTR 65.0%
!! CAGCGTATCGGAGGCACCGC+CGG - Chr3:69340417-69340436 MsG0380015382.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 69340394 69344624 69340394 ID=MsG0380015382.01;Name=MsG0380015382.01
Chr3 mRNA 69340394 69344624 69340394 ID=MsG0380015382.01.T01;Parent=MsG0380015382.01;Name=MsG0380015382.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0.87|0.77|1|1|1|9|237|557
Chr3 exon 69340394 69340924 69340394 ID=MsG0380015382.01.T01:exon:23496;Parent=MsG0380015382.01.T01
Chr3 exon 69341351 69341437 69341351 ID=MsG0380015382.01.T01:exon:23495;Parent=MsG0380015382.01.T01
Chr3 exon 69341605 69341712 69341605 ID=MsG0380015382.01.T01:exon:23494;Parent=MsG0380015382.01.T01
Chr3 exon 69341974 69342091 69341974 ID=MsG0380015382.01.T01:exon:23493;Parent=MsG0380015382.01.T01
Chr3 exon 69342511 69342746 69342511 ID=MsG0380015382.01.T01:exon:23492;Parent=MsG0380015382.01.T01
Chr3 exon 69342842 69343084 69342842 ID=MsG0380015382.01.T01:exon:23491;Parent=MsG0380015382.01.T01
Chr3 exon 69343197 69343332 69343197 ID=MsG0380015382.01.T01:exon:23490;Parent=MsG0380015382.01.T01
Chr3 exon 69343425 69343621 69343425 ID=MsG0380015382.01.T01:exon:23489;Parent=MsG0380015382.01.T01
Chr3 exon 69344370 69344624 69344370 ID=MsG0380015382.01.T01:exon:23488;Parent=MsG0380015382.01.T01
Chr3 CDS 69344370 69344624 69344370 ID=MsG0380015382.01.T01:cds;Parent=MsG0380015382.01.T01
Chr3 CDS 69343425 69343621 69343425 ID=MsG0380015382.01.T01:cds;Parent=MsG0380015382.01.T01
Chr3 CDS 69343197 69343332 69343197 ID=MsG0380015382.01.T01:cds;Parent=MsG0380015382.01.T01
Chr3 CDS 69342842 69343084 69342842 ID=MsG0380015382.01.T01:cds;Parent=MsG0380015382.01.T01
Chr3 CDS 69342511 69342746 69342511 ID=MsG0380015382.01.T01:cds;Parent=MsG0380015382.01.T01
Chr3 CDS 69341974 69342091 69341974 ID=MsG0380015382.01.T01:cds;Parent=MsG0380015382.01.T01
Chr3 CDS 69341605 69341712 69341605 ID=MsG0380015382.01.T01:cds;Parent=MsG0380015382.01.T01
Chr3 CDS 69341351 69341437 69341351 ID=MsG0380015382.01.T01:cds;Parent=MsG0380015382.01.T01
Chr3 CDS 69340631 69340924 69340631 ID=MsG0380015382.01.T01:cds;Parent=MsG0380015382.01.T01
Chr3 three_prime_UTR 69340394 69340630 69340394 ID=MsG0380015382.01.T01:three_prime_utr;Parent=MsG0380015382.01.T01
Gene Sequence

>MsG0380015382.01.T01

ATGTTTTCTAAACCGAAAAAACACAGCGTATCGGAGGCACCGCCGGAGATAAAGGAGCTTTATCATCGTTACTCCGATGAAGGCGGGATCATGACAGCATCTCACCTCAGAAGCTTTCTGATTGAAGTGCAGAAAGAAGAGAAAATCACAGAAGAAGAAACACAAGCCATCATTGATCGTGGAGATCTTAATCTTGAAAGTTTCTTCAAGTTTCTCTTTGCTGATAATAATCCTCCTCTTTTACCTTCCACTGGGGTGCACCAAGATATGAGTTTACCATTGTCACATTATTACATATTCACTGGTCATAATTCATATCTAACTGGAAATCAGCTTAGTAGTGACTGCAGTGATGCCCCCATCATCGAAGCACTTCAGAGAGGTGTTAGAGTGATTGAATTGGATATATGGCCTAATGACTCTAAGGATGATGTTGATGTCCTTCATGGAATGACATTGACGACTCCTGTGGCACTTATCAAATGTTTGACGTCTATTAAGGAGTATGCCTTTGTTGCGTCTGAATATCCGGTTGTAATAACCTTAGAAGACCACCTTACTCCTGATCTTCAGGCCAAAGTGGCTCAGATGGTTACTCAAACATTTGGAGACATACTGTTTTGTCCTACCTCAGAAACCTCGAAGGAATTTCTTTCACCTGATTCACTTAAAAAAAGGATTATCATATCAACCAAGCCGCCTAAGGAGTACCTTGAAGCTAAAGAAGAAAAGGAAAAGGAGGAATCACAGAAGGGAAAGCCTTTAGGTGATGAAGAAGCTTGGGGCAAAGAAGTCCCTAGTTTGAGAGGCGGTACTATAGCTGATTACAAGCAAAACAGTGGTGTCGATGAAGATGATCTTAAGGAGGAGGAAGATTCCGATGAAGCGGAAAAGGCACGCCAAAATGCATCAGATGACTACAGACGCTTAATTGCTATTCATGCTGGGAAGCCTAAAGGTGGAATAGTGGAATGTCTCAAAGTGGAGCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGTCACAGCTCGAAAAGGCTGCTGAAACATATGGAAAAGAAATTGTCAGGTTCACTCAGCAGAATATATTGCGAGTGTATCCGAAAGGTACACGCATTACCTCATCAAATTATAATCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGTTATGGGAGATCTCTTTGGTTGATGCAAGGAATGTTTAAAGCCAATGGAGGATGCGGTTTTGTTAAAAAACCTGATTTTCTATTGAAAACTGGTCCCAATAATGAGGTCACTGTATATATGGGAGAAGGATGGTATTATGATTTCAAGCATACACATTTTGATCAATTCTCATCTCCAGACTTCTATGCAAGGGTTGGAATTGCTGGAGTCCCTTTTGATACTGTTATGAAAAAAACAAAGTCAACAGATAATAGTTGGATGCCTTCTTGGAATGAGGTATTTGAATTCCCGCTTTCTGTTCCGGAGCTGGCGCTGCTTCGCATAGAAGTTCATGAATATGACATGTCTGAGAAGGATGATTTTGGTGGACAAACATGCTTACCTGTGTGGGAACTAAGAAACGGAATTCGAGCAGTTCCATTACATTCCCGCGAAGGAGATAAATACAACAATGTAAAGCTTCTCATGCGCTTTGAATTCATCTGA
Protein sequence

>MsG0380015382.01.T01

MFSKPKKHSVSEAPPEIKELYHRYSDEGGIMTASHLRSFLIEVQKEEKITEEETQAIIDRGDLNLESFFKFLFADNNPPLLPSTGVHQDMSLPLSHYYIFTGHNSYLTGNQLSSDCSDAPIIEALQRGVRVIELDIWPNDSKDDVDVLHGMTLTTPVALIKCLTSIKEYAFVASEYPVVITLEDHLTPDLQAKVAQMVTQTFGDILFCPTSETSKEFLSPDSLKKRIIISTKPPKEYLEAKEEKEKEESQKGKPLGDEEAWGKEVPSLRGGTIADYKQNSGVDEDDLKEEEDSDEAEKARQNASDDYRRLIAIHAGKPKGGIVECLKVEPDKVRRLSLSESQLEKAAETYGKEIVRFTQQNILRVYPKGTRITSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGFVKKPDFLLKTGPNNEVTVYMGEGWYYDFKHTHFDQFSSPDFYARVGIAGVPFDTVMKKTKSTDNSWMPSWNEVFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVWELRNGIRAVPLHSREGDKYNNVKLLMRFEFI*