Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015652.01.T02 | XP_013460871.1 | 96.379 | 359 | 11 | 2 | 1 | 358 | 1 | 358 | 0 | 712 |
| MsG0380015652.01.T01 | XP_013460871.1 | 77.871 | 357 | 21 | 4 | 1 | 299 | 2 | 358 | 0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015652.01.T01 | A0A072V9S2 | 77.871 | 357 | 21 | 4 | 1 | 299 | 2 | 358 | 0.0 | 513 |
| MsG0380015652.01.T02 | A0A072V9S2 | 96.379 | 359 | 11 | 2 | 1 | 358 | 1 | 358 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380015652.01 | MsG0880045949.01 | 0.803002 | 4.291517e-49 | 2.132487e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015652.01.T02 | MTR_3g074210 | 96.379 | 359 | 11 | 2 | 1 | 358 | 1 | 358 | 0.0 | 712 |
| MsG0380015652.01.T01 | MTR_3g074210 | 77.871 | 357 | 21 | 4 | 1 | 299 | 2 | 358 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015652.01.T02 | AT1G78110 | 47.721 | 373 | 146 | 11 | 2 | 357 | 1 | 341 | 9.02e-90 | 273 |
| MsG0380015652.01.T02 | AT1G22230 | 44.602 | 352 | 138 | 13 | 14 | 358 | 13 | 314 | 1.80e-66 | 213 |
| MsG0380015652.01.T01 | AT1G78110 | 48.991 | 347 | 122 | 10 | 1 | 298 | 1 | 341 | 2.27e-87 | 265 |
| MsG0380015652.01.T01 | AT1G22230 | 44.025 | 318 | 131 | 11 | 13 | 299 | 13 | 314 | 5.18e-62 | 199 |
Find 74 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGCTCTGAATGCCTAAC+TGG | 0.167564 | 3:-73132201 | None:intergenic |
| CGCTTTGACCTTCGTTGCTT+TGG | 0.246953 | 3:+73132564 | MsG0380015652.01.T01:CDS |
| AAGAAGAATCATGATGAATA+AGG | 0.266905 | 3:+73132083 | None:intergenic |
| TTCATCTTCCGTTGTGATAT+CGG | 0.281888 | 3:-73132601 | None:intergenic |
| AGATATCACTCTGATTATTA+TGG | 0.283828 | 3:+73133062 | MsG0380015652.01.T01:CDS |
| CGTTGCTTTGGATCCTTCTC+TGG | 0.299512 | 3:+73132576 | MsG0380015652.01.T01:CDS |
| TGTCCGGCACATGTAACTTT+TGG | 0.309607 | 3:-73132375 | None:intergenic |
| CGAGAGCTGTGTTCTCAAAA+TGG | 0.327667 | 3:+73132721 | MsG0380015652.01.T01:CDS |
| GTCAATGGGCTCCGAAAATT+CGG | 0.331887 | 3:+73132341 | MsG0380015652.01.T01:CDS |
| TTTGTGGTGGTGGTGTTTGT+TGG | 0.367290 | 3:-73132220 | None:intergenic |
| CTCATGAGCAATAATGCATT+TGG | 0.370611 | 3:-73132840 | None:intergenic |
| GCAAAGTTTAAAGTCATTGA+TGG | 0.382131 | 3:+73132998 | MsG0380015652.01.T01:intron |
| TAACAGTAAGAAAGAGAATC+TGG | 0.410877 | 3:+73133031 | MsG0380015652.01.T01:intron |
| AGCAAAAGAAGCGTCTCAAT+TGG | 0.411201 | 3:+73132481 | MsG0380015652.01.T01:CDS |
| TTGTGGTGGTGGTGTTTGTT+GGG | 0.415129 | 3:-73132219 | None:intergenic |
| ATGCCTAACTGGGCTGCAAA+TGG | 0.428146 | 3:-73132190 | None:intergenic |
| TTTCTTGAAACCGAGAGATT+CGG | 0.439037 | 3:-73132505 | None:intergenic |
| AAGCCGGTAGTCCTATGTTA+TGG | 0.451375 | 3:+73132307 | MsG0380015652.01.T01:CDS |
| GCAAAAGAAGCGTCTCAATT+GGG | 0.453114 | 3:+73132482 | MsG0380015652.01.T01:CDS |
| GGTGGAAGTATTAGTGGTGG+TGG | 0.463437 | 3:+73132279 | MsG0380015652.01.T01:intron |
| CTCAATTGGGCCGAATCTCT+CGG | 0.464050 | 3:+73132495 | MsG0380015652.01.T01:CDS |
| ACTAATACTTCCACCAGCTC+TGG | 0.470456 | 3:-73132271 | None:intergenic |
| ACTGGGCTGCAAATGGGCTT+AGG | 0.471583 | 3:-73132183 | None:intergenic |
| AGAGCTGGTGGAAGTATTAG+TGG | 0.474683 | 3:+73132273 | MsG0380015652.01.T01:intron |
| CAACTTCGACTCCTCGACAT+TGG | 0.483291 | 3:-73133137 | None:intergenic |
| GCACAAGCACATGTAAAGAA+AGG | 0.490006 | 3:+73132975 | MsG0380015652.01.T01:intron |
| AGCCCATTTGCAGCCCAGTT+AGG | 0.490380 | 3:+73132187 | MsG0380015652.01.T01:CDS |
| TGCTTGTAGGAGCTGGCAAT+CGG | 0.499533 | 3:+73132422 | MsG0380015652.01.T01:CDS |
| TGCCTAACTGGGCTGCAAAT+GGG | 0.505285 | 3:-73132189 | None:intergenic |
| TGTGTTCTCAAAATGGTTCA+TGG | 0.508028 | 3:+73132728 | MsG0380015652.01.T01:CDS |
| AAAATTCTGCTTGTAGGAGC+TGG | 0.509660 | 3:+73132415 | MsG0380015652.01.T01:CDS |
| AGAAGAATCATGATGAATAA+GGG | 0.511067 | 3:+73132084 | None:intergenic |
| CATTATTGCTCATGAGATGT+AGG | 0.513158 | 3:+73132847 | MsG0380015652.01.T01:CDS |
| GGAAGTATTAGTGGTGGTGG+TGG | 0.517450 | 3:+73132282 | MsG0380015652.01.T01:intron |
| CACAAGCACATGTAAAGAAA+GGG | 0.523672 | 3:+73132976 | MsG0380015652.01.T01:intron |
| TAGGAGCTGGCAATCGGTGA+TGG | 0.523933 | 3:+73132428 | MsG0380015652.01.T01:CDS |
| AGTCCATAACATAGGACTAC+CGG | 0.524207 | 3:-73132310 | None:intergenic |
| GGTCTGCTCCGGCGAAAAGT+TGG | 0.528204 | 3:+73132868 | MsG0380015652.01.T01:CDS |
| CAATGTCGAGGAGTCGAAGT+TGG | 0.528793 | 3:+73133138 | MsG0380015652.01.T01:CDS |
| GCTAGAGAGACATGGATTGT+TGG | 0.533758 | 3:+73133101 | MsG0380015652.01.T01:CDS |
| AGCAATAATGCATTTGGAGG+AGG | 0.535996 | 3:-73132834 | None:intergenic |
| TTGAGAGAAAGTGAAGAAGA+AGG | 0.536385 | 3:+73132891 | MsG0380015652.01.T01:CDS |
| AAAGATGAAAACTGTGGTGA+TGG | 0.536802 | 3:+73132798 | MsG0380015652.01.T01:CDS |
| TTCACAGAAAGAGAAAGAAA+AGG | 0.548519 | 3:+73132941 | MsG0380015652.01.T01:intron |
| TGGGCTCTGAATGCCTAACT+GGG | 0.550805 | 3:-73132200 | None:intergenic |
| GACGAAGATGAGTTCGAGAT+GGG | 0.554019 | 3:-73132155 | None:intergenic |
| ATGAGCAATAATGCATTTGG+AGG | 0.556402 | 3:-73132837 | None:intergenic |
| TCTCCAAAAGTTACATGTGC+CGG | 0.557213 | 3:+73132372 | MsG0380015652.01.T01:CDS |
| TGTGATATCGGTTCCAGAGA+AGG | 0.557445 | 3:-73132589 | None:intergenic |
| AGTGGTGGTGGTGGCCAAGC+CGG | 0.561066 | 3:+73132291 | MsG0380015652.01.T01:intron |
| AGACGAAGATGAGTTCGAGA+TGG | 0.561451 | 3:-73132156 | None:intergenic |
| ATAACATAGGACTACCGGCT+TGG | 0.562254 | 3:-73132305 | None:intergenic |
| GCAACGAAGGTCAAAGCGTA+TGG | 0.563560 | 3:-73132559 | None:intergenic |
| AGAGAGACATGGATTGTTGG+TGG | 0.564922 | 3:+73133104 | MsG0380015652.01.T01:CDS |
| AGATCAATCTCCAGAGCTGG+TGG | 0.565296 | 3:+73132261 | MsG0380015652.01.T01:intron |
| ATGATGAATAAGGGAAGAGA+AGG | 0.569973 | 3:+73132093 | MsG0380015652.01.T02:CDS |
| AGAGAAAGTGAAGAAGAAGG+TGG | 0.570217 | 3:+73132894 | MsG0380015652.01.T01:CDS |
| AAGAGATCAATCTCCAGAGC+TGG | 0.573199 | 3:+73132258 | MsG0380015652.01.T01:intron |
| AGATTGATCTCTTACGCTGA+TGG | 0.581062 | 3:-73132248 | None:intergenic |
| CATGAGATGTAGGTCTGCTC+CGG | 0.581145 | 3:+73132857 | MsG0380015652.01.T01:CDS |
| CTGATATTGCTAGAGAGACA+TGG | 0.588095 | 3:+73133093 | MsG0380015652.01.T01:CDS |
| GAAGATGAAGAAGATGATGA+TGG | 0.613400 | 3:+73132621 | MsG0380015652.01.T01:CDS |
| ACATACTAACAAATCAGTAG+AGG | 0.620708 | 3:-73132130 | None:intergenic |
| CATACTAACAAATCAGTAGA+GGG | 0.624971 | 3:-73132129 | None:intergenic |
| AGAAGGATCCAAAGCAACGA+AGG | 0.624993 | 3:-73132572 | None:intergenic |
| AAGTTTAAAGTCATTGATGG+AGG | 0.627241 | 3:+73133001 | MsG0380015652.01.T01:intron |
| GAAAAGAAAGATGAAAACTG+TGG | 0.629136 | 3:+73132792 | MsG0380015652.01.T01:CDS |
| GTGTATTATAATGATCATGT+TGG | 0.643736 | 3:+73132666 | MsG0380015652.01.T01:intron |
| GTGCCGGACAGATCAAAATG+AGG | 0.656962 | 3:+73132388 | MsG0380015652.01.T01:CDS |
| GTTGGTGTAGAAGAGAGTCA+TGG | 0.683261 | 3:+73132684 | MsG0380015652.01.T01:intron |
| CTCTGGAACCGATATCACAA+CGG | 0.690197 | 3:+73132593 | MsG0380015652.01.T01:CDS |
| GTTTAACAGATCCAATGTCG+AGG | 0.692057 | 3:+73133126 | MsG0380015652.01.T01:CDS |
| CAGTAAGAAAGAGAATCTGG+TGG | 0.697635 | 3:+73133034 | MsG0380015652.01.T01:intron |
| GCTGGTGGAAGTATTAGTGG+TGG | 0.729898 | 3:+73132276 | MsG0380015652.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AGATATCACTCTGATTATTA+TGG | + | Chr3:73133062-73133081 | MsG0380015652.01.T01:CDS | 25.0% |
| ! | GTGTATTATAATGATCATGT+TGG | + | Chr3:73132666-73132685 | MsG0380015652.01.T01:intron | 25.0% |
| !!! | TTGTTTTTAGTCCATAACAT+AGG | - | Chr3:73132321-73132340 | None:intergenic | 25.0% |
| ACATACTAACAAATCAGTAG+AGG | - | Chr3:73132133-73132152 | None:intergenic | 30.0% | |
| CATACTAACAAATCAGTAGA+GGG | - | Chr3:73132132-73132151 | None:intergenic | 30.0% | |
| GAAAAGAAAGATGAAAACTG+TGG | + | Chr3:73132792-73132811 | MsG0380015652.01.T01:CDS | 30.0% | |
| TAACAGTAAGAAAGAGAATC+TGG | + | Chr3:73133031-73133050 | MsG0380015652.01.T01:intron | 30.0% | |
| TGGACTAAAAACAAGTCAAT+GGG | + | Chr3:73132327-73132346 | MsG0380015652.01.T01:CDS | 30.0% | |
| TTCACAGAAAGAGAAAGAAA+AGG | + | Chr3:73132941-73132960 | MsG0380015652.01.T01:intron | 30.0% | |
| ! | AAGTTTAAAGTCATTGATGG+AGG | + | Chr3:73133001-73133020 | MsG0380015652.01.T01:intron | 30.0% |
| ! | ATGGACTAAAAACAAGTCAA+TGG | + | Chr3:73132326-73132345 | MsG0380015652.01.T01:CDS | 30.0% |
| ! | GCAAAGTTTAAAGTCATTGA+TGG | + | Chr3:73132998-73133017 | MsG0380015652.01.T01:intron | 30.0% |
| AAAGATGAAAACTGTGGTGA+TGG | + | Chr3:73132798-73132817 | MsG0380015652.01.T01:CDS | 35.0% | |
| ATGAGCAATAATGCATTTGG+AGG | - | Chr3:73132840-73132859 | None:intergenic | 35.0% | |
| ATGATGAATAAGGGAAGAGA+AGG | + | Chr3:73132093-73132112 | MsG0380015652.01.T02:CDS | 35.0% | |
| CACAAGCACATGTAAAGAAA+GGG | + | Chr3:73132976-73132995 | MsG0380015652.01.T01:intron | 35.0% | |
| CATTATTGCTCATGAGATGT+AGG | + | Chr3:73132847-73132866 | MsG0380015652.01.T01:CDS | 35.0% | |
| CTCATGAGCAATAATGCATT+TGG | - | Chr3:73132843-73132862 | None:intergenic | 35.0% | |
| GAAGATGAAGAAGATGATGA+TGG | + | Chr3:73132621-73132640 | MsG0380015652.01.T01:CDS | 35.0% | |
| TGTGTTCTCAAAATGGTTCA+TGG | + | Chr3:73132728-73132747 | MsG0380015652.01.T01:CDS | 35.0% | |
| TTCATCTTCCGTTGTGATAT+CGG | - | Chr3:73132604-73132623 | None:intergenic | 35.0% | |
| TTGAGAGAAAGTGAAGAAGA+AGG | + | Chr3:73132891-73132910 | MsG0380015652.01.T01:CDS | 35.0% | |
| TTTCTTGAAACCGAGAGATT+CGG | - | Chr3:73132508-73132527 | None:intergenic | 35.0% | |
| ! | CTCCTACAAGCAGAATTTTT+AGG | - | Chr3:73132414-73132433 | None:intergenic | 35.0% |
| AAAATTCTGCTTGTAGGAGC+TGG | + | Chr3:73132415-73132434 | MsG0380015652.01.T01:CDS | 40.0% | |
| AGAGAAAGTGAAGAAGAAGG+TGG | + | Chr3:73132894-73132913 | MsG0380015652.01.T01:CDS | 40.0% | |
| AGATTGATCTCTTACGCTGA+TGG | - | Chr3:73132251-73132270 | None:intergenic | 40.0% | |
| AGCAATAATGCATTTGGAGG+AGG | - | Chr3:73132837-73132856 | None:intergenic | 40.0% | |
| AGTCCATAACATAGGACTAC+CGG | - | Chr3:73132313-73132332 | None:intergenic | 40.0% | |
| CAGTAAGAAAGAGAATCTGG+TGG | + | Chr3:73133034-73133053 | MsG0380015652.01.T01:intron | 40.0% | |
| CTGATATTGCTAGAGAGACA+TGG | + | Chr3:73133093-73133112 | MsG0380015652.01.T01:CDS | 40.0% | |
| GCACAAGCACATGTAAAGAA+AGG | + | Chr3:73132975-73132994 | MsG0380015652.01.T01:intron | 40.0% | |
| GGCCTAAAAATTCTGCTTGT+AGG | + | Chr3:73132409-73132428 | MsG0380015652.01.T01:CDS | 40.0% | |
| GTTTAACAGATCCAATGTCG+AGG | + | Chr3:73133126-73133145 | MsG0380015652.01.T01:CDS | 40.0% | |
| TCTCCAAAAGTTACATGTGC+CGG | + | Chr3:73132372-73132391 | MsG0380015652.01.T01:CDS | 40.0% | |
| ! | TACGCTGATGGTAAGTTTTG+TGG | - | Chr3:73132239-73132258 | None:intergenic | 40.0% |
| !! | AGAGGTTGGTTCCGAATTTT+CGG | - | Chr3:73132355-73132374 | None:intergenic | 40.0% |
| !! | AGCAAAAGAAGCGTCTCAAT+TGG | + | Chr3:73132481-73132500 | MsG0380015652.01.T01:CDS | 40.0% |
| !! | CATGTAACTTTTGGAGAGGT+TGG | - | Chr3:73132369-73132388 | None:intergenic | 40.0% |
| !! | GCAAAAGAAGCGTCTCAATT+GGG | + | Chr3:73132482-73132501 | MsG0380015652.01.T01:CDS | 40.0% |
| AAGAGATCAATCTCCAGAGC+TGG | + | Chr3:73132258-73132277 | MsG0380015652.01.T01:intron | 45.0% | |
| AAGCCGGTAGTCCTATGTTA+TGG | + | Chr3:73132307-73132326 | MsG0380015652.01.T01:CDS | 45.0% | |
| ACTAATACTTCCACCAGCTC+TGG | - | Chr3:73132274-73132293 | None:intergenic | 45.0% | |
| AGAAGGATCCAAAGCAACGA+AGG | - | Chr3:73132575-73132594 | None:intergenic | 45.0% | |
| AGACGAAGATGAGTTCGAGA+TGG | - | Chr3:73132159-73132178 | None:intergenic | 45.0% | |
| CGAGAGCTGTGTTCTCAAAA+TGG | + | Chr3:73132721-73132740 | MsG0380015652.01.T01:CDS | 45.0% | |
| GACGAAGATGAGTTCGAGAT+GGG | - | Chr3:73132158-73132177 | None:intergenic | 45.0% | |
| GTTGGTGTAGAAGAGAGTCA+TGG | + | Chr3:73132684-73132703 | MsG0380015652.01.T01:intron | 45.0% | |
| ! | AGAGAGACATGGATTGTTGG+TGG | + | Chr3:73133104-73133123 | MsG0380015652.01.T01:CDS | 45.0% |
| ! | ATAACATAGGACTACCGGCT+TGG | - | Chr3:73132308-73132327 | None:intergenic | 45.0% |
| ! | GCTAGAGAGACATGGATTGT+TGG | + | Chr3:73133101-73133120 | MsG0380015652.01.T01:CDS | 45.0% |
| ! | GTCAATGGGCTCCGAAAATT+CGG | + | Chr3:73132341-73132360 | MsG0380015652.01.T01:CDS | 45.0% |
| ! | TCTCTCAACCAACTTTTCGC+CGG | - | Chr3:73132879-73132898 | None:intergenic | 45.0% |
| ! | TGTCCGGCACATGTAACTTT+TGG | - | Chr3:73132378-73132397 | None:intergenic | 45.0% |
| !! | AGAGCTGGTGGAAGTATTAG+TGG | + | Chr3:73132273-73132292 | MsG0380015652.01.T01:intron | 45.0% |
| !! | AGGCCTCATTTTGATCTGTC+CGG | - | Chr3:73132394-73132413 | None:intergenic | 45.0% |
| !! | CTCTGGAACCGATATCACAA+CGG | + | Chr3:73132593-73132612 | MsG0380015652.01.T01:CDS | 45.0% |
| !! | GATGGTAAGTTTTGTGGTGG+TGG | - | Chr3:73132233-73132252 | None:intergenic | 45.0% |
| !! | GCTGATGGTAAGTTTTGTGG+TGG | - | Chr3:73132236-73132255 | None:intergenic | 45.0% |
| !! | GGCACATGTAACTTTTGGAG+AGG | - | Chr3:73132373-73132392 | None:intergenic | 45.0% |
| !! | TGTGATATCGGTTCCAGAGA+AGG | - | Chr3:73132592-73132611 | None:intergenic | 45.0% |
| !! | TTGTGGTGGTGGTGTTTGTT+GGG | - | Chr3:73132222-73132241 | None:intergenic | 45.0% |
| !! | TTTGTGGTGGTGGTGTTTGT+TGG | - | Chr3:73132223-73132242 | None:intergenic | 45.0% |
| AGATCAATCTCCAGAGCTGG+TGG | + | Chr3:73132261-73132280 | MsG0380015652.01.T01:intron | 50.0% | |
| ATGCCTAACTGGGCTGCAAA+TGG | - | Chr3:73132193-73132212 | None:intergenic | 50.0% | |
| CAACTTCGACTCCTCGACAT+TGG | - | Chr3:73133140-73133159 | None:intergenic | 50.0% | |
| CAATGTCGAGGAGTCGAAGT+TGG | + | Chr3:73133138-73133157 | MsG0380015652.01.T01:CDS | 50.0% | |
| CATGAGATGTAGGTCTGCTC+CGG | + | Chr3:73132857-73132876 | MsG0380015652.01.T01:CDS | 50.0% | |
| CGCTTTGACCTTCGTTGCTT+TGG | + | Chr3:73132564-73132583 | MsG0380015652.01.T01:CDS | 50.0% | |
| CTCAATTGGGCCGAATCTCT+CGG | + | Chr3:73132495-73132514 | MsG0380015652.01.T01:CDS | 50.0% | |
| GCAACGAAGGTCAAAGCGTA+TGG | - | Chr3:73132562-73132581 | None:intergenic | 50.0% | |
| GTGCCGGACAGATCAAAATG+AGG | + | Chr3:73132388-73132407 | MsG0380015652.01.T01:CDS | 50.0% | |
| TGCCTAACTGGGCTGCAAAT+GGG | - | Chr3:73132192-73132211 | None:intergenic | 50.0% | |
| TGCTTGTAGGAGCTGGCAAT+CGG | + | Chr3:73132422-73132441 | MsG0380015652.01.T01:CDS | 50.0% | |
| ! | CGTTGCTTTGGATCCTTCTC+TGG | + | Chr3:73132576-73132595 | MsG0380015652.01.T01:CDS | 50.0% |
| !! | GCTGGTGGAAGTATTAGTGG+TGG | + | Chr3:73132276-73132295 | MsG0380015652.01.T01:intron | 50.0% |
| !! | GGAAGTATTAGTGGTGGTGG+TGG | + | Chr3:73132282-73132301 | MsG0380015652.01.T01:intron | 50.0% |
| !! | GGTGGAAGTATTAGTGGTGG+TGG | + | Chr3:73132279-73132298 | MsG0380015652.01.T01:intron | 50.0% |
| !! | TGGGCTCTGAATGCCTAACT+GGG | - | Chr3:73132203-73132222 | None:intergenic | 50.0% |
| !! | TTGGGCTCTGAATGCCTAAC+TGG | - | Chr3:73132204-73132223 | None:intergenic | 50.0% |
| AGCCCATTTGCAGCCCAGTT+AGG | + | Chr3:73132187-73132206 | MsG0380015652.01.T01:CDS | 55.0% | |
| TAGGAGCTGGCAATCGGTGA+TGG | + | Chr3:73132428-73132447 | MsG0380015652.01.T01:CDS | 55.0% | |
| ! | ACTGGGCTGCAAATGGGCTT+AGG | - | Chr3:73132186-73132205 | None:intergenic | 55.0% |
| GGTCTGCTCCGGCGAAAAGT+TGG | + | Chr3:73132868-73132887 | MsG0380015652.01.T01:CDS | 60.0% | |
| !! | AGTGGTGGTGGTGGCCAAGC+CGG | + | Chr3:73132291-73132310 | MsG0380015652.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 73132093 | 73133169 | 73132093 | ID=MsG0380015652.01;Name=MsG0380015652.01 |
| Chr3 | mRNA | 73132096 | 73133169 | 73132096 | ID=MsG0380015652.01.T01;Parent=MsG0380015652.01;Name=MsG0380015652.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|0|0|4|0|299 |
| Chr3 | exon | 73132096 | 73132255 | 73132096 | ID=MsG0380015652.01.T01:exon:767;Parent=MsG0380015652.01.T01 |
| Chr3 | exon | 73132295 | 73132642 | 73132295 | ID=MsG0380015652.01.T01:exon:768;Parent=MsG0380015652.01.T01 |
| Chr3 | exon | 73132691 | 73132957 | 73132691 | ID=MsG0380015652.01.T01:exon:769;Parent=MsG0380015652.01.T01 |
| Chr3 | exon | 73133045 | 73133169 | 73133045 | ID=MsG0380015652.01.T01:exon:770;Parent=MsG0380015652.01.T01 |
| Chr3 | CDS | 73132096 | 73132255 | 73132096 | ID=MsG0380015652.01.T01:cds;Parent=MsG0380015652.01.T01 |
| Chr3 | CDS | 73132295 | 73132642 | 73132295 | ID=MsG0380015652.01.T01:cds;Parent=MsG0380015652.01.T01 |
| Chr3 | CDS | 73132691 | 73132957 | 73132691 | ID=MsG0380015652.01.T01:cds;Parent=MsG0380015652.01.T01 |
| Chr3 | CDS | 73133045 | 73133169 | 73133045 | ID=MsG0380015652.01.T01:cds;Parent=MsG0380015652.01.T01 |
| Chr3 | mRNA | 73132093 | 73133169 | 73132093 | ID=MsG0380015652.01.T02;Parent=MsG0380015652.01;Name=MsG0380015652.01.T02;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|358 |
| Chr3 | exon | 73132093 | 73133169 | 73132093 | ID=MsG0380015652.01.T02:exon:771;Parent=MsG0380015652.01.T02 |
| Chr3 | CDS | 73132093 | 73133169 | 73132093 | ID=MsG0380015652.01.T02:cds;Parent=MsG0380015652.01.T02 |
| Gene Sequence |
| Protein sequence |
