AlfalfaGEDB | MsG0880045949.01

M. sativa cultivar ZhongmuNo.1 / MsG0880045949.01

KEGG: -
GO: GO:0004252 GO:0006508
PFAM: PF00082

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045949.01.T01	XP_003608462.1	100	102	0	0	1	102	239	340	3.70E-61	210

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045949.01.T01	O65351	87.736	106	13	0	1	106	241	346	5.20E-58	194

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045949.01.T01	G7JCT4	100.000	102	0	0	1	102	239	340	1.77e-61	210

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080049008.01	MsG0880045949.01	0.876985	9.029603e-69	4.466528e-65
MsG0180000535.01	MsG0880045949.01	0.841412	4.828122e-58	7.088751e-55
MsG0880044356.01	MsG0880045949.01	0.802515	5.409738e-49	2.655036e-46
MsG0880045949.01	MsG0880045963.01	0.919171	6.284424e-87	1.989719e-82
MsG0880045949.01	MsG0880046080.01	0.805590	1.240263e-49	6.587311e-47
MsG0880045949.01	MsG0880047057.01	0.803564	3.283189e-49	1.655312e-46
MsG0180003637.01	MsG0880045949.01	0.812429	4.258586e-51	2.707208e-48
MsG0180004121.01	MsG0880045949.01	0.810448	1.146964e-50	6.915381e-48
MsG0180004366.01	MsG0880045949.01	0.826153	3.171933e-54	2.950601e-51
MsG0180005096.01	MsG0880045949.01	0.823480	1.353943e-53	1.167185e-50
MsG0180005367.01	MsG0880045949.01	0.828050	1.114987e-54	1.095824e-51
MsG0180005898.01	MsG0880045949.01	-0.803959	2.717335e-49	1.383991e-46
MsG0180006076.01	MsG0880045949.01	-0.832316	1.013457e-55	1.128522e-52
MsG0180006182.01	MsG0880045949.01	0.811417	7.074202e-51	4.376597e-48
MsG0780040323.01	MsG0880045949.01	0.812915	3.333469e-51	2.146217e-48
MsG0780040560.01	MsG0880045949.01	0.847707	9.750339e-60	1.748095e-56
MsG0780040847.01	MsG0880045949.01	0.817216	3.699123e-52	2.677578e-49
MsG0780040978.01	MsG0880045949.01	0.842551	2.412855e-58	3.671520e-55
MsG0780040990.01	MsG0880045949.01	0.849711	2.712593e-60	5.187868e-57
MsG0780041180.01	MsG0880045949.01	0.844865	5.800738e-59	9.491366e-56
MsG0780041354.01	MsG0880045949.01	0.828696	7.787207e-55	7.798374e-52
MsG0780041403.01	MsG0880045949.01	0.823933	1.060686e-53	9.261779e-51
MsG0780041439.01	MsG0880045949.01	0.844806	6.016929e-59	9.827932e-56
MsG0880041992.01	MsG0880045949.01	0.812984	3.220029e-51	2.076984e-48
MsG0880043056.01	MsG0880045949.01	-0.813016	3.167967e-51	2.045243e-48
MsG0880043882.01	MsG0880045949.01	0.800782	1.226355e-48	5.760072e-46
MsG0280011281.01	MsG0880045949.01	-0.801230	9.931731e-49	4.718205e-46
MsG0380011846.01	MsG0880045949.01	0.812705	3.706417e-51	2.373211e-48
MsG0380013843.01	MsG0880045949.01	0.851102	1.104292e-60	2.210736e-57
MsG0680031117.01	MsG0880045949.01	0.814993	1.160603e-51	7.905321e-49
MsG0680031795.01	MsG0880045949.01	0.801551	8.535803e-49	4.087939e-46
MsG0680032416.01	MsG0880045949.01	-0.818346	2.056198e-52	1.535352e-49
MsG0480019171.01	MsG0880045949.01	0.814214	1.726859e-51	1.151635e-48
MsG0480020810.01	MsG0880045949.01	0.802028	6.811940e-49	3.302145e-46
MsG0480021300.01	MsG0880045949.01	0.880515	5.150395e-70	2.911945e-66
MsG0480021753.01	MsG0880045949.01	0.813296	2.750439e-51	1.789188e-48
MsG0480021977.01	MsG0880045949.01	0.800426	1.449034e-48	6.745320e-46
MsG0480022490.01	MsG0880045949.01	0.801215	1.000271e-48	4.750130e-46
MsG0480023064.01	MsG0880045949.01	0.809225	2.102042e-50	1.227218e-47
MsG0480023188.01	MsG0880045949.01	0.826959	2.036831e-54	1.939125e-51
MsG0480023454.01	MsG0880045949.01	0.813798	2.132687e-51	1.406389e-48
MsG0480023851.01	MsG0880045949.01	-0.814312	1.642789e-51	1.098582e-48
MsG0480023944.01	MsG0880045949.01	0.808248	3.400442e-50	1.934681e-47
MsG0480023987.01	MsG0880045949.01	0.806297	8.809416e-50	4.764327e-47
MsG0580025071.01	MsG0880045949.01	0.814559	1.448665e-51	9.752428e-49
MsG0580025464.01	MsG0880045949.01	0.801914	7.191232e-49	3.475917e-46
MsG0380015429.01	MsG0880045949.01	0.815959	7.074788e-52	4.947818e-49
MsG0380015652.01	MsG0880045949.01	0.803002	4.291517e-49	2.132487e-46
MsG0380015656.01	MsG0880045949.01	0.821063	4.927989e-53	3.967920e-50
MsG0380016120.01	MsG0880045949.01	0.820289	7.420838e-53	5.847425e-50
MsG0380016141.01	MsG0880045949.01	0.848263	6.850942e-60	1.250103e-56
MsG0380016485.01	MsG0880045949.01	0.842943	1.898602e-58	2.924167e-55
MsG0380016567.01	MsG0880045949.01	0.871647	5.825239e-67	2.367850e-63
MsG0380016865.01	MsG0880045949.01	0.823822	1.125923e-53	9.801123e-51
MsG0380016872.01	MsG0880045949.01	0.811619	6.393947e-51	3.976647e-48
MsG0380017212.01	MsG0880045949.01	0.820071	8.322646e-53	6.519293e-50
MsG0380017967.01	MsG0880045949.01	0.803945	2.735412e-49	1.392725e-46
MsG0480018111.01	MsG0880045949.01	0.805909	1.063136e-49	5.693057e-47
MsG0580027854.01	MsG0880045949.01	0.806703	7.233024e-50	3.952511e-47
MsG0580028302.01	MsG0880045949.01	0.845398	4.164007e-59	6.930166e-56
MsG0580028364.01	MsG0880045949.01	0.805048	1.610927e-49	8.437709e-47
MsG0580030141.01	MsG0880045949.01	0.804608	1.990975e-49	1.031041e-46
MsG0680030296.01	MsG0880045949.01	0.838618	2.584065e-57	3.480311e-54
MsG0280007598.01	MsG0880045949.01	0.812804	3.525118e-51	2.262842e-48
MsG0280007667.01	MsG0880045949.01	0.850137	2.061861e-60	3.998933e-57
MsG0280009526.01	MsG0880045949.01	0.804681	1.922301e-49	9.973859e-47
MsG0780036481.01	MsG0880045949.01	0.802695	4.966270e-49	2.448714e-46
MsG0780036726.01	MsG0880045949.01	0.812789	3.552082e-51	2.279297e-48
MsG0780036793.01	MsG0880045949.01	0.826564	2.531548e-54	2.382583e-51
MsG0780038647.01	MsG0880045949.01	0.846609	1.950963e-59	3.376771e-56
MsG0780039234.01	MsG0880045949.01	0.813813	2.116399e-51	1.396247e-48
MsG0780039619.01	MsG0880045949.01	0.802129	6.494335e-49	3.156299e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045949.01.T01	MTR_4g095360	100.000	102	0	0	1	102	239	340	4.48e-65	210
MsG0880045949.01.T01	MTR_3g102810	75.490	102	25	0	1	102	233	334	1.11e-49	168
MsG0880045949.01.T01	MTR_5g016120	77.451	102	23	0	1	102	244	345	9.98e-49	166
MsG0880045949.01.T01	MTR_1g018510	74.510	102	26	0	1	102	200	301	1.83e-47	162
MsG0880045949.01.T01	MTR_2g042130	72.549	102	28	0	1	102	257	358	1.30e-46	160
MsG0880045949.01.T01	MTR_0047s0120	75.490	102	25	0	1	102	240	341	4.91e-45	155
MsG0880045949.01.T01	MTR_1g102350	66.667	102	34	0	1	102	259	360	2.01e-44	154
MsG0880045949.01.T01	MTR_8g021130	61.111	108	40	1	1	106	256	363	5.85e-41	144
MsG0880045949.01.T01	MTR_4g125180	71.845	103	28	1	1	102	236	338	3.21e-39	139
MsG0880045949.01.T01	MTR_4g073540	58.182	110	42	2	1	106	244	353	6.69e-38	135
MsG0880045949.01.T01	MTR_7g098630	61.905	105	40	0	1	105	240	344	3.64e-37	134
MsG0880045949.01.T01	MTR_4g134320	61.765	102	35	1	4	101	256	357	5.55e-36	130
MsG0880045949.01.T01	MTR_3g082200	58.407	113	43	1	4	112	257	369	6.96e-36	130
MsG0880045949.01.T01	MTR_3g082200	57.391	115	45	1	2	112	117	231	7.19e-36	129
MsG0880045949.01.T01	MTR_3g082200	57.391	115	45	1	2	112	132	246	8.17e-36	129
MsG0880045949.01.T01	MTR_7g104200	58.763	97	40	0	5	101	240	336	6.92e-35	127
MsG0880045949.01.T01	MTR_8g022870	62.745	102	38	0	1	102	242	343	1.55e-34	126
MsG0880045949.01.T01	MTR_7g098070	58.824	102	38	1	4	101	252	353	8.13e-33	121
MsG0880045949.01.T01	MTR_7g075900	54.902	102	46	0	1	102	255	356	2.05e-32	120
MsG0880045949.01.T01	MTR_5g096750	56.000	100	44	0	2	101	259	358	8.79e-32	118
MsG0880045949.01.T01	MTR_8g033150	57.143	98	41	1	5	101	225	322	1.30e-31	117
MsG0880045949.01.T01	MTR_8g033150	57.143	98	41	1	5	101	252	349	1.44e-31	117
MsG0880045949.01.T01	MTR_5g081280	52.941	102	46	1	2	101	196	297	2.27e-31	113
MsG0880045949.01.T01	MTR_7g118080	57.426	101	43	0	1	101	250	350	4.32e-31	116
MsG0880045949.01.T01	MTR_7g081750	54.630	108	41	2	2	101	255	362	6.75e-31	115
MsG0880045949.01.T01	MTR_1g078110	53.465	101	47	0	1	101	250	350	8.76e-31	115
MsG0880045949.01.T01	MTR_7g079310	50.943	106	52	0	1	106	252	357	1.89e-30	114
MsG0880045949.01.T01	MTR_7g075890	56.122	98	42	1	5	101	398	495	1.99e-30	114
MsG0880045949.01.T01	MTR_7g079300	50.943	106	52	0	1	106	255	360	2.30e-30	114
MsG0880045949.01.T01	MTR_8g079900	54.082	98	44	1	5	101	242	339	2.56e-30	114
MsG0880045949.01.T01	MTR_8g024380	55.446	101	45	0	1	101	251	351	2.76e-30	114
MsG0880045949.01.T01	MTR_8g079900	54.082	98	44	1	5	101	144	241	3.42e-30	114
MsG0880045949.01.T01	MTR_1g079120	52.475	101	48	0	1	101	249	349	3.69e-30	114
MsG0880045949.01.T01	MTR_3g104930	60.396	101	37	1	4	101	241	341	5.28e-30	113
MsG0880045949.01.T01	MTR_5g011280	56.566	99	43	0	1	99	246	344	1.66e-29	112
MsG0880045949.01.T01	MTR_5g085690	54.206	107	42	2	2	101	257	363	1.67e-29	112
MsG0880045949.01.T01	MTR_7g081420	52.830	106	42	2	4	101	258	363	3.29e-29	111
MsG0880045949.01.T01	MTR_8g072440	53.922	102	44	2	2	101	209	309	3.45e-29	111
MsG0880045949.01.T01	MTR_8g072440	53.922	102	44	2	2	101	251	351	3.53e-29	110
MsG0880045949.01.T01	MTR_7g081500	52.830	106	42	2	4	101	257	362	3.99e-29	110
MsG0880045949.01.T01	MTR_6g075370	53.000	100	44	1	5	101	239	338	4.25e-29	110
MsG0880045949.01.T01	MTR_4g071560	50.000	108	51	2	2	106	178	285	6.32e-29	110
MsG0880045949.01.T01	MTR_3g114420	59.406	101	37	2	4	101	245	344	7.19e-29	110
MsG0880045949.01.T01	MTR_8g024420	55.340	103	44	1	1	101	212	314	1.30e-28	109
MsG0880045949.01.T01	MTR_8g024370	54.717	106	43	2	1	101	242	347	1.72e-28	108
MsG0880045949.01.T01	MTR_5g025010	51.961	102	46	2	2	101	246	346	1.74e-28	108
MsG0880045949.01.T01	MTR_5g025010	51.961	102	46	2	2	101	214	314	1.88e-28	108
MsG0880045949.01.T01	MTR_4g102400	55.882	102	40	2	1	99	245	344	2.15e-28	108
MsG0880045949.01.T01	MTR_8g024390	55.238	105	43	2	1	101	246	350	2.47e-28	108
MsG0880045949.01.T01	MTR_4g103430	51.485	101	47	2	2	101	254	353	1.77e-27	106
MsG0880045949.01.T01	MTR_4g103490	50.980	102	47	2	2	101	256	356	2.03e-27	105
MsG0880045949.01.T01	MTR_3g464790	56.000	100	40	2	5	101	225	323	2.96e-27	105
MsG0880045949.01.T01	MTR_7g481600	49.074	108	47	2	2	101	256	363	5.07e-27	105
MsG0880045949.01.T01	MTR_3g114160	53.846	104	44	1	2	101	137	240	6.33e-27	102
MsG0880045949.01.T01	MTR_4g053630	53.922	102	44	2	2	101	220	320	6.38e-27	104
MsG0880045949.01.T01	MTR_7g034380	52.525	99	45	2	5	101	194	292	7.37e-27	104
MsG0880045949.01.T01	MTR_7g081580	49.074	108	47	2	2	101	256	363	7.68e-27	104
MsG0880045949.01.T01	MTR_4g053630	53.922	102	44	2	2	101	143	243	8.22e-27	104
MsG0880045949.01.T01	MTR_8g083220	47.458	118	55	2	2	112	263	380	1.12e-26	103
MsG0880045949.01.T01	MTR_4g103495	48.571	105	49	1	2	101	104	208	1.16e-26	103
MsG0880045949.01.T01	MTR_4g103495	48.571	105	49	1	2	101	253	357	1.22e-26	103
MsG0880045949.01.T01	MTR_4g103450	48.515	101	51	1	2	101	228	328	1.32e-26	103
MsG0880045949.01.T01	MTR_2g018125	49.219	128	54	4	2	119	260	386	1.33e-26	103
MsG0880045949.01.T01	MTR_4g053635	52.941	102	45	2	2	101	166	266	1.35e-26	103
MsG0880045949.01.T01	MTR_4g103480	48.515	101	51	1	2	101	271	371	1.77e-26	103
MsG0880045949.01.T01	MTR_5g011340	59.000	100	40	1	1	99	239	338	2.01e-26	103
MsG0880045949.01.T01	MTR_5g011320	60.000	100	39	1	1	99	235	334	2.44e-26	102
MsG0880045949.01.T01	MTR_2g018135	52.727	110	42	3	2	101	258	367	5.59e-26	102
MsG0880045949.01.T01	MTR_5g011260	57.576	99	42	0	1	99	243	341	6.63e-26	101
MsG0880045949.01.T01	MTR_4g103400	46.535	101	52	2	2	101	255	354	7.77e-26	101
MsG0880045949.01.T01	MTR_8g005710	48.485	99	49	2	5	101	201	299	8.95e-26	101
MsG0880045949.01.T01	MTR_5g011190	60.000	100	39	1	1	99	242	341	1.53e-25	100
MsG0880045949.01.T01	MTR_3g010080	55.556	99	42	2	5	101	233	331	1.73e-25	100
MsG0880045949.01.T01	MTR_5g081100	48.000	100	49	1	5	101	182	281	2.30e-25	99.4
MsG0880045949.01.T01	MTR_7g079295	48.113	106	55	0	1	106	255	360	2.61e-25	99.8
MsG0880045949.01.T01	MTR_8g027260	47.959	98	49	2	5	100	233	330	3.64e-25	99.8
MsG0880045949.01.T01	MTR_5g011370	60.000	100	39	1	1	99	262	361	3.67e-25	99.8
MsG0880045949.01.T01	MTR_5g055920	47.525	101	52	1	2	101	151	251	4.66e-25	99.4
MsG0880045949.01.T01	MTR_5g011310	57.000	100	42	1	1	99	242	341	5.28e-25	99.4
MsG0880045949.01.T01	MTR_5g011270	60.606	99	39	0	1	99	243	341	2.59e-24	97.1
MsG0880045949.01.T01	MTR_7g081380	46.429	112	48	2	2	101	256	367	3.36e-24	97.1
MsG0880045949.01.T01	MTR_6g055570	48.485	99	49	2	5	101	234	332	1.61e-23	94.7
MsG0880045949.01.T01	MTR_8g042670	49.000	100	48	1	5	101	244	343	1.67e-23	94.7
MsG0880045949.01.T01	MTR_8g042670	49.000	100	48	1	5	101	120	219	1.82e-23	94.7
MsG0880045949.01.T01	MTR_6g055410	48.485	99	49	2	5	101	234	332	4.41e-23	93.6
MsG0880045949.01.T01	MTR_8g042710	48.077	104	51	1	6	106	248	351	7.80e-23	92.8
MsG0880045949.01.T01	MTR_3g452290	48.515	101	48	2	5	101	136	236	1.01e-22	92.4
MsG0880045949.01.T01	MTR_3g451220	48.515	101	48	2	5	101	136	236	1.01e-22	92.4
MsG0880045949.01.T01	MTR_3g114410	50.495	101	46	2	4	101	246	345	1.12e-22	92.4
MsG0880045949.01.T01	MTR_1g007030	47.475	99	50	2	5	101	234	332	1.72e-22	92.0
MsG0880045949.01.T01	MTR_1g048110	47.525	101	51	2	2	101	231	330	2.32e-22	91.7
MsG0880045949.01.T01	MTR_8g042710	48.077	104	51	1	6	106	248	351	3.32e-22	91.3
MsG0880045949.01.T01	MTR_2g049200	57.282	103	42	1	1	101	250	352	5.04e-21	87.8
MsG0880045949.01.T01	MTR_2g044630	46.465	99	51	2	5	101	227	325	6.88e-21	87.4
MsG0880045949.01.T01	MTR_8g006680	44.118	102	55	2	2	101	229	330	9.70e-21	87.0
MsG0880045949.01.T01	MTR_8g005300	44.118	102	55	2	2	101	229	330	9.70e-21	87.0
MsG0880045949.01.T01	MTR_8g005640	44.118	102	55	2	2	101	229	330	9.70e-21	87.0
MsG0880045949.01.T01	MTR_3g061110	44.706	85	46	1	18	101	255	339	3.21e-20	85.5
MsG0880045949.01.T01	MTR_1g006990	44.444	99	53	2	5	101	234	332	8.60e-20	84.3
MsG0880045949.01.T01	MTR_2g070250	44.000	100	54	2	5	102	177	276	1.89e-19	82.8
MsG0880045949.01.T01	MTR_2g037850	38.318	107	60	2	1	101	267	373	3.32e-16	73.9
MsG0880045949.01.T01	MTR_4g127480	37.383	107	61	2	1	101	267	373	5.49e-16	73.6
MsG0880045949.01.T01	MTR_2g042640	46.988	83	42	2	5	85	203	285	8.54e-16	72.8
MsG0880045949.01.T01	MTR_3g114140	51.250	80	32	2	26	100	63	140	1.99e-15	71.6
MsG0880045949.01.T01	MTR_4g132620	37.143	105	62	1	1	101	267	371	3.82e-14	68.2
MsG0880045949.01.T01	MTR_2g046740	37.778	135	73	4	1	125	288	421	7.20e-14	67.4
MsG0880045949.01.T01	MTR_2g042650	46.575	73	38	1	30	101	188	260	1.00e-13	67.0
MsG0880045949.01.T01	MTR_8g089230	40.385	104	57	2	1	99	296	399	4.24e-12	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045949.01.T01	AT5G67360	87.736	106	13	0	1	106	241	346	5.30e-59	194
MsG0880045949.01.T01	AT2G05920	74.510	102	26	0	1	102	237	338	1.82e-48	165
MsG0880045949.01.T01	AT5G51750	69.608	102	31	0	1	102	256	357	1.23e-45	157
MsG0880045949.01.T01	AT3G14240	62.745	102	38	0	1	102	239	340	2.37e-40	142
MsG0880045949.01.T01	AT3G14067	59.223	103	40	1	1	101	246	348	3.69e-38	136
MsG0880045949.01.T01	AT1G04110	61.905	105	40	0	1	105	251	355	1.12e-37	135
MsG0880045949.01.T01	AT5G03620	56.701	97	42	0	5	101	243	339	5.51e-35	127
MsG0880045949.01.T01	AT4G34980	57.547	106	41	2	1	102	234	339	6.00e-35	127
MsG0880045949.01.T01	AT5G03620	56.701	97	42	0	5	101	243	339	9.50e-35	127
MsG0880045949.01.T01	AT2G04160	57.944	107	41	2	4	106	255	361	6.08e-33	122
MsG0880045949.01.T01	AT5G59810	55.882	102	41	1	4	101	262	363	6.91e-33	121
MsG0880045949.01.T01	AT1G01900	53.333	105	49	0	1	105	254	358	1.75e-32	120
MsG0880045949.01.T01	AT1G20160	58.252	103	40	1	2	101	201	303	8.80e-31	115
MsG0880045949.01.T01	AT1G20160	58.252	103	40	1	2	101	240	342	1.01e-30	115
MsG0880045949.01.T01	AT1G20160	58.252	103	40	1	2	101	240	342	1.11e-30	115
MsG0880045949.01.T01	AT1G32940	52.252	111	43	2	2	102	247	357	1.36e-29	112
MsG0880045949.01.T01	AT1G32940	52.252	111	43	2	2	102	247	357	1.54e-29	112
MsG0880045949.01.T01	AT1G32940	52.252	111	43	2	2	102	196	306	1.79e-29	112
MsG0880045949.01.T01	AT1G32940	52.252	111	43	2	2	102	196	306	1.79e-29	112
MsG0880045949.01.T01	AT1G66210	54.808	104	43	2	2	101	259	362	5.25e-29	110
MsG0880045949.01.T01	AT4G10510	55.556	108	40	2	2	101	252	359	1.62e-28	109
MsG0880045949.01.T01	AT4G10510	55.556	108	40	2	2	101	240	347	1.73e-28	109
MsG0880045949.01.T01	AT4G10510	55.556	108	40	2	2	101	196	303	1.87e-28	108
MsG0880045949.01.T01	AT4G10510	55.556	108	40	2	2	101	181	288	1.93e-28	108
MsG0880045949.01.T01	AT1G32950	51.724	116	44	3	2	105	246	361	2.30e-28	108
MsG0880045949.01.T01	AT1G32950	51.724	116	44	3	2	105	195	310	2.73e-28	108
MsG0880045949.01.T01	AT4G10520	50.980	102	49	1	2	102	248	349	1.08e-27	107
MsG0880045949.01.T01	AT1G66220	46.957	115	57	2	2	112	257	371	1.55e-27	106
MsG0880045949.01.T01	AT1G32970	48.673	113	49	2	2	105	209	321	1.65e-27	106
MsG0880045949.01.T01	AT1G32960	52.252	111	43	3	2	102	250	360	1.67e-27	106
MsG0880045949.01.T01	AT4G10540	50.893	112	43	3	2	102	248	358	6.29e-27	104
MsG0880045949.01.T01	AT4G10550	49.138	116	47	3	2	105	268	383	1.05e-26	103
MsG0880045949.01.T01	AT4G10550	49.138	116	47	3	2	105	252	367	1.09e-26	103
MsG0880045949.01.T01	AT4G10550	49.138	116	47	3	2	105	196	311	1.42e-26	103
MsG0880045949.01.T01	AT4G10550	49.138	116	47	3	2	105	196	311	1.42e-26	103
MsG0880045949.01.T01	AT5G67090	47.706	109	49	1	1	101	234	342	3.91e-26	102
MsG0880045949.01.T01	AT5G45640	50.000	110	45	2	2	101	230	339	5.83e-26	102
MsG0880045949.01.T01	AT4G15040	48.246	114	58	1	6	119	193	305	1.36e-25	100
MsG0880045949.01.T01	AT4G15040	48.246	114	58	1	6	119	193	305	1.36e-25	100
MsG0880045949.01.T01	AT4G21650	49.558	113	45	3	2	102	269	381	2.02e-25	100
MsG0880045949.01.T01	AT1G20150	49.485	97	49	0	5	101	248	344	2.48e-25	100
MsG0880045949.01.T01	AT5G45650	49.091	110	46	3	2	101	266	375	2.90e-25	100
MsG0880045949.01.T01	AT5G45650	49.091	110	46	3	2	101	266	375	2.90e-25	100
MsG0880045949.01.T01	AT5G58830	49.153	118	58	2	5	121	231	347	3.99e-25	99.8
MsG0880045949.01.T01	AT4G10530	49.057	106	49	2	2	102	248	353	4.51e-25	99.4
MsG0880045949.01.T01	AT3G46840	51.000	100	46	2	5	101	238	337	5.63e-25	99.0
MsG0880045949.01.T01	AT5G59120	44.444	126	68	2	5	129	229	353	7.52e-25	99.0
MsG0880045949.01.T01	AT4G26330	48.649	111	51	2	2	106	205	315	1.50e-24	97.8
MsG0880045949.01.T01	AT4G26330	48.649	111	51	2	2	106	219	329	1.64e-24	97.8
MsG0880045949.01.T01	AT5G11940	46.429	112	51	3	2	105	256	366	1.93e-24	97.4
MsG0880045949.01.T01	AT4G21630	50.000	108	47	3	2	102	267	374	3.08e-24	97.1
MsG0880045949.01.T01	AT5G59090	48.980	98	49	1	5	101	230	327	5.33e-24	96.3
MsG0880045949.01.T01	AT5G59090	48.980	98	49	1	5	101	228	325	5.33e-24	96.3
MsG0880045949.01.T01	AT5G59090	48.980	98	49	1	5	101	230	327	5.54e-24	96.3
MsG0880045949.01.T01	AT4G00230	52.041	98	46	1	5	101	243	340	1.96e-23	94.7
MsG0880045949.01.T01	AT4G00230	52.041	98	46	1	5	101	243	340	2.23e-23	94.4
MsG0880045949.01.T01	AT5G58840	48.980	98	49	1	5	101	233	330	4.57e-23	93.6
MsG0880045949.01.T01	AT5G58840	48.980	98	49	1	5	101	233	330	5.46e-23	93.2
MsG0880045949.01.T01	AT5G58840	48.980	98	49	1	5	101	233	330	6.15e-23	93.2
MsG0880045949.01.T01	AT4G21640	48.113	106	50	1	2	102	271	376	9.05e-23	92.8
MsG0880045949.01.T01	AT5G59130	46.939	98	50	2	5	101	233	329	3.04e-22	91.3
MsG0880045949.01.T01	AT5G59130	46.939	98	50	2	5	101	229	325	3.38e-22	91.3
MsG0880045949.01.T01	AT5G59130	46.939	98	50	2	5	101	194	290	3.56e-22	91.3
MsG0880045949.01.T01	AT5G59130	46.939	98	50	2	5	101	233	329	3.58e-22	91.3
MsG0880045949.01.T01	AT5G59190	50.000	98	47	2	5	101	193	289	5.73e-22	90.5
MsG0880045949.01.T01	AT3G46850	44.167	120	63	3	5	121	237	355	1.92e-21	89.0
MsG0880045949.01.T01	AT4G20430	37.681	138	75	4	1	128	298	434	1.59e-20	86.3
MsG0880045949.01.T01	AT4G20430	37.681	138	75	4	1	128	298	434	2.03e-20	86.3
MsG0880045949.01.T01	AT4G20430	37.681	138	75	4	1	128	298	434	2.03e-20	86.3
MsG0880045949.01.T01	AT4G21323	45.872	109	54	3	2	105	300	408	6.05e-20	84.7
MsG0880045949.01.T01	AT5G58820	43.878	98	54	1	5	101	227	324	6.76e-20	84.7
MsG0880045949.01.T01	AT1G30600	38.333	120	67	3	1	114	276	394	3.72e-19	82.4
MsG0880045949.01.T01	AT5G59100	41.837	98	56	1	5	101	237	334	1.54e-18	80.9
MsG0880045949.01.T01	AT5G44530	38.333	120	67	3	1	114	284	402	1.98e-18	80.5
MsG0880045949.01.T01	AT5G44530	38.333	120	67	3	1	114	284	402	3.81e-18	79.7
MsG0880045949.01.T01	AT5G44530	38.333	120	67	3	1	114	284	402	3.93e-18	79.7
MsG0880045949.01.T01	AT4G21326	40.187	107	57	2	2	101	194	300	9.75e-18	78.6
MsG0880045949.01.T01	AT2G19170	40.187	107	58	2	1	101	263	369	1.03e-17	78.6
MsG0880045949.01.T01	AT2G19170	40.187	107	58	2	1	101	263	369	1.03e-17	78.6
MsG0880045949.01.T01	AT4G30020	40.187	107	58	2	1	101	264	370	1.33e-17	78.2
MsG0880045949.01.T01	AT4G30020	40.187	107	58	2	1	101	264	370	1.33e-17	78.2
MsG0880045949.01.T01	AT4G30020	40.187	107	58	2	1	101	264	370	1.33e-17	78.2
MsG0880045949.01.T01	AT4G30020	40.187	107	58	2	1	101	264	370	1.33e-17	78.2
MsG0880045949.01.T01	AT2G39850	40.367	109	53	3	5	101	229	337	4.52e-17	76.6
MsG0880045949.01.T01	AT1G62340	38.739	111	62	2	1	106	281	390	4.15e-16	73.9

Find 30 sgRNAs with CRISPR-Local

Find 30 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGCTATTGACAAAGCTATTT+CGG	0.272079	8:-66823405	MsG0880045949.01.T01:CDS
ATCAACGGTAACTGAGATTC+CGG	0.396754	8:+66823108	None:intergenic
TTCAGAGACAGTGTAGCTAT+TGG	0.402314	8:-66823332	MsG0880045949.01.T01:CDS
TTGCTGTTTATAAAGTTTGT+TGG	0.409964	8:-66823460	MsG0880045949.01.T01:CDS
AATGTTCTGTCACTTTCTCT+TGG	0.413004	8:-66823374	MsG0880045949.01.T01:CDS
ATTCTAGTTTCTTGTTCAGC+TGG	0.415966	8:-66823284	MsG0880045949.01.T01:CDS
GTGGGATGGCCACACGCGCT+AGG	0.423981	8:-66823484	None:intergenic
TCTTGTTCAGCTGGAAATGC+TGG	0.424168	8:-66823275	MsG0880045949.01.T01:CDS
CTGTCACTTTCTCTTGGTGG+TGG	0.430228	8:-66823368	MsG0880045949.01.T01:CDS
GTTCTGTCACTTTCTCTTGG+TGG	0.460015	8:-66823371	MsG0880045949.01.T01:CDS
CTATCGAGGCAACGCTCTAC+CGG	0.478969	8:-66823127	MsG0880045949.01.T01:CDS
TATAAAGTTTGTTGGAAAGG+TGG	0.532291	8:-66823452	MsG0880045949.01.T01:CDS
GTTTATAAAGTTTGTTGGAA+AGG	0.536571	8:-66823455	MsG0880045949.01.T01:CDS
TGGGATGGCCACACGCGCTA+GGG	0.546556	8:-66823483	None:intergenic
GTCTCTCTAATGTTGCTCCA+TGG	0.549761	8:-66823238	MsG0880045949.01.T01:CDS
TTTCCCGCTTCTGTTAGTCT+CGG	0.552581	8:-66823180	MsG0880045949.01.T01:CDS
GTCAATAGCGGCCAAAATGT+CGG	0.554249	8:+66823418	None:intergenic
TGGATTACTACAGTGGGTGC+TGG	0.582172	8:-66823218	MsG0880045949.01.T01:CDS
TTACCGAGACTAACAGAAGC+GGG	0.584188	8:+66823177	None:intergenic
GCACCCACTGTAGTAATCCA+TGG	0.594833	8:+66823221	None:intergenic
TCCGGTGTGTCGCTCTATCG+AGG	0.603742	8:-66823141	MsG0880045949.01.T01:CDS
AACAGCAACCCTAGCGCGTG+TGG	0.605228	8:+66823475	None:intergenic
CGAAATAGCTTTGTCAATAG+CGG	0.616643	8:+66823406	None:intergenic
TTAGAGAGACTATAAGCACT+TGG	0.620602	8:+66823251	None:intergenic
GCTTCTGTTAGTCTCGGTAA+CGG	0.648843	8:-66823174	MsG0880045949.01.T01:CDS
GCTCCATGGATTACTACAGT+GGG	0.656607	8:-66823224	MsG0880045949.01.T01:CDS
GCCTCGATAGAGCGACACAC+CGG	0.679143	8:+66823140	None:intergenic
GGTAACGGACTTAACTACTC+CGG	0.682480	8:-66823159	MsG0880045949.01.T01:CDS
TGCTCCATGGATTACTACAG+TGG	0.688244	8:-66823225	MsG0880045949.01.T01:CDS
GTTACCGAGACTAACAGAAG+CGG	0.712723	8:+66823176	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GTTTATAAAGTTTGTTGGAA+AGG	-	Chr8:66823133-66823152	MsG0880045949.01.T01:CDS	25.0%
!!!	TTGCTGTTTATAAAGTTTGT+TGG	-	Chr8:66823128-66823147	MsG0880045949.01.T01:CDS	25.0%
!!	TATAAAGTTTGTTGGAAAGG+TGG	-	Chr8:66823136-66823155	MsG0880045949.01.T01:CDS	30.0%
!!!	TTGTTTTAGTTCCGACATTT+TGG	-	Chr8:66823159-66823178	MsG0880045949.01.T01:CDS	30.0%
	CGCTATTGACAAAGCTATTT+CGG	-	Chr8:66823183-66823202	MsG0880045949.01.T01:CDS	35.0%
	TTAGAGAGACTATAAGCACT+TGG	+	Chr8:66823340-66823359	None:intergenic	35.0%
!!	AATGTTCTGTCACTTTCTCT+TGG	-	Chr8:66823214-66823233	MsG0880045949.01.T01:CDS	35.0%
!!	ATTCTAGTTTCTTGTTCAGC+TGG	-	Chr8:66823304-66823323	MsG0880045949.01.T01:CDS	35.0%
!!	CGAAATAGCTTTGTCAATAG+CGG	+	Chr8:66823185-66823204	None:intergenic	35.0%
!!!	TATTGGTGCTTTTTCTGCAA+TGG	-	Chr8:66823273-66823292	MsG0880045949.01.T01:CDS	35.0%
	TTCAGAGACAGTGTAGCTAT+TGG	-	Chr8:66823256-66823275	MsG0880045949.01.T01:CDS	40.0%
!!	GCTTTTTCTGCAATGGAGAA+AGG	-	Chr8:66823280-66823299	MsG0880045949.01.T01:CDS	40.0%
	GTCAATAGCGGCCAAAATGT+CGG	+	Chr8:66823173-66823192	None:intergenic	45.0%
	GTCTCTCTAATGTTGCTCCA+TGG	-	Chr8:66823350-66823369	MsG0880045949.01.T01:CDS	45.0%
	GTTACCGAGACTAACAGAAG+CGG	+	Chr8:66823415-66823434	None:intergenic	45.0%
	TCTTGTTCAGCTGGAAATGC+TGG	-	Chr8:66823313-66823332	MsG0880045949.01.T01:CDS	45.0%
	TTACCGAGACTAACAGAAGC+GGG	+	Chr8:66823414-66823433	None:intergenic	45.0%
!	GCTCCATGGATTACTACAGT+GGG	-	Chr8:66823364-66823383	MsG0880045949.01.T01:CDS	45.0%
!	GCTTCTGTTAGTCTCGGTAA+CGG	-	Chr8:66823414-66823433	MsG0880045949.01.T01:CDS	45.0%
!	TGCTCCATGGATTACTACAG+TGG	-	Chr8:66823363-66823382	MsG0880045949.01.T01:CDS	45.0%
!	TTTCCCGCTTCTGTTAGTCT+CGG	-	Chr8:66823408-66823427	MsG0880045949.01.T01:CDS	45.0%
!!	GGTAACGGACTTAACTACTC+CGG	-	Chr8:66823429-66823448	MsG0880045949.01.T01:CDS	45.0%
!!	GTTCTGTCACTTTCTCTTGG+TGG	-	Chr8:66823217-66823236	MsG0880045949.01.T01:CDS	45.0%
	GCACCCACTGTAGTAATCCA+TGG	+	Chr8:66823370-66823389	None:intergenic	50.0%
	TGGATTACTACAGTGGGTGC+TGG	-	Chr8:66823370-66823389	MsG0880045949.01.T01:CDS	50.0%
!!	CTGTCACTTTCTCTTGGTGG+TGG	-	Chr8:66823220-66823239	MsG0880045949.01.T01:CDS	50.0%
	CTATCGAGGCAACGCTCTAC+CGG	-	Chr8:66823461-66823480	MsG0880045949.01.T01:CDS	55.0%
	AACAGCAACCCTAGCGCGTG+TGG	+	Chr8:66823116-66823135	None:intergenic	60.0%
	GCCTCGATAGAGCGACACAC+CGG	+	Chr8:66823451-66823470	None:intergenic	60.0%
!	TCCGGTGTGTCGCTCTATCG+AGG	-	Chr8:66823447-66823466	MsG0880045949.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	66823109	66823501	66823109	ID=MsG0880045949.01;Name=MsG0880045949.01
Chr8	mRNA	66823109	66823501	66823109	ID=MsG0880045949.01.T01;Parent=MsG0880045949.01;Name=MsG0880045949.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|130
Chr8	exon	66823109	66823501	66823109	ID=MsG0880045949.01.T01:exon:13872;Parent=MsG0880045949.01.T01
Chr8	CDS	66823109	66823501	66823109	ID=MsG0880045949.01.T01:cds;Parent=MsG0880045949.01.T01

Gene Sequence

>MsG0880045949.01.T01

ATGGCCACACGCGCTAGGGTTGCTGTTTATAAAGTTTGTTGGAAAGGTGGTTGTTTTAGTTCCGACATTTTGGCCGCTATTGACAAAGCTATTTCGGACAACGTTAATGTTCTGTCACTTTCTCTTGGTGGTGGAATGTCTGATTATTTCAGAGACAGTGTAGCTATTGGTGCTTTTTCTGCAATGGAGAAAGGAATTCTAGTTTCTTGTTCAGCTGGAAATGCTGGTCCAAGTGCTTATAGTCTCTCTAATGTTGCTCCATGGATTACTACAGTGGGTGCTGGTACTCTTGATCGTGATTTCCCGCTTCTGTTAGTCTCGGTAACGGACTTAACTACTCCGGTGTGTCGCTCTATCGAGGCAACGCTCTACCGGAATCTCAGTTACCGTTGA

Protein sequence

>MsG0880045949.01.T01

MATRARVAVYKVCWKGGCFSSDILAAIDKAISDNVNVLSLSLGGGMSDYFRDSVAIGAFSAMEKGILVSCSAGNAGPSAYSLSNVAPWITTVGAGTLDRDFPLLLVSVTDLTTPVCRSIEATLYRNLSYR*