AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015653.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015653.01.T01 MTR_3g074230 97.108 657 18 1 1 657 1 656 0.0 1323
MsG0380015653.01.T01 MTR_3g074230 97.204 608 16 1 1 608 1 607 0.0 1226
MsG0380015653.01.T01 MTR_5g063200 65.926 675 186 9 15 657 14 676 0.0 863
MsG0380015653.01.T01 MTR_2g078020 47.200 500 247 5 169 656 201 695 2.86e-152 457
MsG0380015653.01.T01 MTR_3g087480 57.983 357 149 1 190 545 220 576 1.86e-148 442
MsG0380015653.01.T01 MTR_2g078020 46.919 422 209 4 169 580 201 617 2.16e-125 385
MsG0380015653.01.T01 MTR_7g090940 25.946 370 226 10 199 520 663 1032 8.34e-17 85.5
MsG0380015653.01.T01 MTR_2g090135 30.714 140 89 2 402 533 74 213 3.35e-15 76.6
MsG0380015653.01.T01 MTR_7g059150 33.621 116 70 1 425 533 95 210 5.66e-15 75.9
MsG0380015653.01.T01 MTR_2g090135 33.333 120 72 2 402 513 74 193 5.30e-13 68.9
MsG0380015653.01.T01 MTR_1g030300 38.202 89 55 0 193 281 182 270 1.24e-12 70.9
MsG0380015653.01.T01 MTR_1g084100 32.500 160 83 4 145 280 20 178 9.43e-12 68.2
MsG0380015653.01.T01 MTR_1g084100 33.333 120 73 2 425 538 91 209 3.80e-11 66.2
MsG0380015653.01.T01 MTR_1g041435 26.772 127 92 1 427 552 13 139 1.14e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015653.01.T01 AT5G65160 57.103 359 153 1 190 547 234 592 1.11e-142 429
MsG0380015653.01.T01 AT1G78120 51.073 466 212 6 107 558 64 527 6.78e-141 422
MsG0380015653.01.T01 AT2G42580 44.748 476 247 5 191 655 219 689 1.00e-129 398
MsG0380015653.01.T01 AT1G53300 44.421 475 255 5 191 657 226 699 1.56e-129 398
MsG0380015653.01.T01 AT5G10090 54.875 359 161 1 190 547 235 593 1.01e-127 390
MsG0380015653.01.T01 AT3G14950 43.038 474 259 5 191 655 257 728 8.45e-123 382
MsG0380015653.01.T01 AT1G78120 50.966 414 187 6 107 506 64 475 8.98e-121 368
MsG0380015653.01.T01 AT3G58620 41.296 494 278 7 164 649 185 674 3.17e-120 373
MsG0380015653.01.T01 AT3G58620 41.060 453 255 8 164 608 185 633 6.39e-104 330
MsG0380015653.01.T01 AT2G41520 26.913 379 225 11 193 520 554 931 2.85e-22 102
MsG0380015653.01.T01 AT2G41520 26.913 379 225 11 193 520 454 831 3.51e-22 102
MsG0380015653.01.T01 AT5G12430 27.027 370 216 11 199 520 615 978 1.08e-21 100
MsG0380015653.01.T01 AT2G41520 25.886 367 213 10 193 520 554 900 2.65e-18 90.1
MsG0380015653.01.T01 AT1G04190 29.545 132 92 1 422 552 12 143 1.35e-13 72.8
MsG0380015653.01.T01 AT1G04190 31.613 155 86 4 195 343 18 158 1.19e-11 67.0
MsG0380015653.01.T01 AT1G56440 33.793 145 80 4 171 304 42 181 4.91e-13 72.4
MsG0380015653.01.T01 AT1G56440 33.793 145 80 4 171 304 52 191 5.78e-13 72.0
MsG0380015653.01.T01 AT4G08320 37.500 88 55 0 193 280 176 263 4.72e-12 68.9
MsG0380015653.01.T01 AT4G08320 37.500 88 55 0 193 280 176 263 5.18e-12 68.9
MsG0380015653.01.T01 AT4G30480 31.897 116 72 1 425 533 105 220 1.08e-11 66.6

Find 150 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTGGTGTAACAAATTATT+TGG 0.119279 3:-73142135 MsG0380015653.01.T01:CDS
ATGTTTACCTTGGTTTATTT+TGG 0.128517 3:+73140565 None:intergenic
CTTGAAATTTGGTTCAAATT+TGG 0.134743 3:-73141181 MsG0380015653.01.T01:CDS
CTTCAATTGCTTTCTCAAAT+TGG 0.170655 3:+73141509 None:intergenic
CAAATCTTTGCTTGGGGACT+TGG 0.181486 3:+73143287 None:intergenic
CACCAATCAAGGTCAAATTT+TGG 0.193161 3:+73142150 None:intergenic
TTCTTTGTAACACTTGTTCT+TGG 0.222622 3:+73143213 None:intergenic
ACAATGATAAGTCGCCTTAT+TGG 0.250669 3:+73142975 None:intergenic
ATTACATTAATAATTTAAAA+TGG 0.256366 3:+73140296 None:intergenic
GATGTTAAGGACTTGAAATT+TGG 0.295798 3:-73141192 MsG0380015653.01.T01:CDS
TCTAGTATTCTGTTGCTTCT+AGG 0.307407 3:+73143093 None:intergenic
GTGTGCTCAAATCTTTGCTT+GGG 0.322112 3:+73143280 None:intergenic
TCATGTATTGCACATTGGTT+TGG 0.330623 3:-73140384 MsG0380015653.01.T01:three_prime_UTR
GCAATGCTATACATTCTCTT+TGG 0.334798 3:+73140516 None:intergenic
AGTAAATTCCCAGTGAGTTT+TGG 0.337635 3:+73143258 None:intergenic
TTGAGTGTGAGGAAGCTATT+AGG 0.340035 3:-73142903 MsG0380015653.01.T01:CDS
AATCCTTTGAATGTTTGATT+AGG 0.351113 3:-73140431 MsG0380015653.01.T01:three_prime_UTR
CCCATTGATTTCAATACCTC+AGG 0.351885 3:+73143069 None:intergenic
GCCAGTTCCGAATCAAAATA+TGG 0.356186 3:+73142515 None:intergenic
AGTGCTTACCTTCTGATGAT+AGG 0.363405 3:-73142102 MsG0380015653.01.T01:CDS
TTTCTTGCTTGAGTCTCTGT+TGG 0.365146 3:+73143453 None:intergenic
CATGTATTGCACATTGGTTT+GGG 0.377023 3:-73140383 MsG0380015653.01.T01:three_prime_UTR
TATTGCTATTGATTCCAATA+AGG 0.379818 3:-73142989 MsG0380015653.01.T01:CDS
TGTATTAGGCTGCACTTTCA+TGG 0.380183 3:-73143604 MsG0380015653.01.T01:CDS
TGCCAAAATTTGACCTTGAT+TGG 0.383026 3:-73142152 MsG0380015653.01.T01:CDS
GGTGTGCTCAAATCTTTGCT+TGG 0.384189 3:+73143279 None:intergenic
TTAGGGAAGTTTATAGGAAA+AGG 0.386820 3:-73140485 MsG0380015653.01.T01:three_prime_UTR
TCTTTGTAACACTTGTTCTT+GGG 0.393667 3:+73143214 None:intergenic
TTTGCATCTCAAGCAATGAT+AGG 0.404294 3:-73141158 MsG0380015653.01.T01:CDS
GAGTGCTGCTTTGATTGGTT+TGG 0.405309 3:-73142947 MsG0380015653.01.T01:CDS
GATTGAGGACCATCCTTACT+TGG 0.416894 3:-73140808 MsG0380015653.01.T01:CDS
CGCTTTCTGTGATGCTGTCC+CGG 0.418844 3:+73141735 None:intergenic
AGTGCTGCTTTGATTGGTTT+GGG 0.424114 3:-73142946 MsG0380015653.01.T01:CDS
AATCAAAGGAACATAATTGC+TGG 0.424856 3:-73140276 MsG0380015653.01.T01:three_prime_UTR
TCTGTGAATAACAGTGTAAT+GGG 0.425818 3:-73143162 MsG0380015653.01.T01:CDS
TATATGCTTCTTGATGCCTT+AGG 0.427924 3:+73142190 None:intergenic
TCTTTGGTTTCAACTTTCCA+TGG 0.431528 3:+73140532 None:intergenic
CAGGGGATGAGGAGGTTGCT+AGG 0.435241 3:-73141260 MsG0380015653.01.T01:CDS
GATAGGAGCACAAGTTTACT+TGG 0.437598 3:-73142085 MsG0380015653.01.T01:CDS
CTAATCTTTCTAACATCTCA+TGG 0.437641 3:+73140703 None:intergenic
ATAATTTGTTACACCAATCA+AGG 0.440498 3:+73142139 None:intergenic
GAGCCTAATGGTAATTCCTT+AGG 0.441683 3:-73143372 MsG0380015653.01.T01:CDS
AGAAGGTAAGCACTAGAAAC+TGG 0.443158 3:+73142111 None:intergenic
GCTACGTGGCGAAGATGTTA+AGG 0.443207 3:-73141205 MsG0380015653.01.T01:CDS
GTATTGTTAACACTCTTGAT+AGG 0.444808 3:+73143522 None:intergenic
GTTTGGCGACAATATACTTC+AGG 0.446146 3:-73142849 MsG0380015653.01.T01:intron
AATAAGAGTGCTGCTTTGAT+TGG 0.447678 3:-73142952 MsG0380015653.01.T01:CDS
TCTTGATTCAAAATTAATCA+TGG 0.448826 3:-73143661 MsG0380015653.01.T01:exon
TCCTAGAGCTCATAGCCGTT+TGG 0.451864 3:-73142866 MsG0380015653.01.T01:CDS
AGCATTGCCTTGCTATAATT+AGG 0.454187 3:+73141460 None:intergenic
CCCTGAGGTATTGAAATCAA+TGG 0.454730 3:-73143070 MsG0380015653.01.T01:CDS
CTTGCTATAATTAGGCTGAA+TGG 0.454968 3:+73141468 None:intergenic
GAGTGGTAACTTGCTCTTCA+AGG 0.459194 3:-73141638 MsG0380015653.01.T01:CDS
CATAACAGAACTGAATTGAA+TGG 0.462474 3:+73141562 None:intergenic
GAGCAAGTTACCACTCAATC+TGG 0.463121 3:+73141645 None:intergenic
TAAGCAAGTAGTATTGGTAT+TGG 0.464410 3:-73140985 MsG0380015653.01.T01:CDS
AAGAGAAAAGCCAGGGGATG+AGG 0.467297 3:-73141271 MsG0380015653.01.T01:CDS
CCAAGGTAAACATGCTTACA+AGG 0.469735 3:-73140555 MsG0380015653.01.T01:three_prime_UTR
CTAGCAACCTCCTCATCCCC+TGG 0.470836 3:+73141261 None:intergenic
CTATGAGCTCTAGGATAAGA+AGG 0.473281 3:+73142874 None:intergenic
AGTCCTAAGGAATTACCATT+AGG 0.477516 3:+73143369 None:intergenic
GCATATAATAGTTGGAAAGA+TGG 0.477770 3:-73141326 MsG0380015653.01.T01:intron
CCTTGTAAGCATGTTTACCT+TGG 0.478125 3:+73140555 None:intergenic
ATTCAACAGAAAGAGCCTAA+TGG 0.478774 3:-73143384 MsG0380015653.01.T01:CDS
GGCGACAGGTTTGAGGATGC+CGG 0.483819 3:-73141754 MsG0380015653.01.T01:intron
ACATCCACATCGGTGTTGCT+TGG 0.484135 3:+73141700 None:intergenic
TAAATTATTAATGTAATCAA+AGG 0.484394 3:-73140290 MsG0380015653.01.T01:three_prime_UTR
CCTGAGGTATTGAAATCAAT+GGG 0.486524 3:-73143069 MsG0380015653.01.T01:CDS
ATGTGGATGTAGTGGTAAGA+AGG 0.488979 3:-73141687 MsG0380015653.01.T01:CDS
CTGCTTTGATTGGTTTGGGA+AGG 0.490544 3:-73142942 MsG0380015653.01.T01:CDS
TCAAGGGTTAAAGAAATTCC+TGG 0.492325 3:-73140732 MsG0380015653.01.T01:CDS
TTTATGTGGCGACAGGTTTG+AGG 0.493616 3:-73141761 MsG0380015653.01.T01:intron
GAACTTGAAGAGCCTGAGCT+TGG 0.496261 3:+73142489 None:intergenic
CAGCCTAATCAAACATTCAA+AGG 0.500495 3:+73140428 None:intergenic
TTCTGTGAATAACAGTGTAA+TGG 0.500685 3:-73143163 MsG0380015653.01.T01:CDS
GCGACAGGTTTGAGGATGCC+GGG 0.502376 3:-73141753 MsG0380015653.01.T01:intron
GGAACTGGCTGTCCAAGCTC+AGG 0.503496 3:-73142501 MsG0380015653.01.T01:CDS
AGGGGATGAGGAGGTTGCTA+GGG 0.504601 3:-73141259 MsG0380015653.01.T01:CDS
AGGCTAGGAAAGTCAAGGAT+TGG 0.505066 3:-73142448 MsG0380015653.01.T01:CDS
CATATAATAGTTGGAAAGAT+GGG 0.505585 3:-73141325 MsG0380015653.01.T01:intron
CAGGTTGGGAGAAGCAGAGA+AGG 0.505897 3:-73142561 MsG0380015653.01.T01:CDS
AACTCATAAGCAAGTAGTAT+TGG 0.509236 3:-73140991 MsG0380015653.01.T01:CDS
AAGCCTTGTTGAAGCTCCTA+AGG 0.509270 3:-73142206 MsG0380015653.01.T01:CDS
AAGTTTACTTGGCAGCCGGC+AGG 0.513297 3:-73142074 MsG0380015653.01.T01:intron
ACACAGTCTGCAATATCCTT+AGG 0.513535 3:-73142407 MsG0380015653.01.T01:CDS
GGATTGGAAAGTTATATTGA+AGG 0.516728 3:-73142432 MsG0380015653.01.T01:CDS
AAATATACAAGAATGGATCA+AGG 0.517212 3:-73140749 MsG0380015653.01.T01:CDS
GTATTAGGCTGCACTTTCAT+GGG 0.517698 3:-73143603 MsG0380015653.01.T01:CDS
GCATGTGCGGTATACAATGA+AGG 0.518061 3:-73141598 MsG0380015653.01.T01:CDS
GGGAATATAATGAGGAAAAG+TGG 0.520529 3:-73143141 MsG0380015653.01.T01:CDS
ACTTATTCTTGCAAGTCCTA+AGG 0.526997 3:+73143356 None:intergenic
GCACAAGTTTACTTGGCAGC+CGG 0.529380 3:-73142078 MsG0380015653.01.T01:CDS
TTGAGCACACCAAAACTCAC+TGG 0.539356 3:-73143267 MsG0380015653.01.T01:CDS
ATCTTTCATGTATTGCACAT+TGG 0.541077 3:-73140389 MsG0380015653.01.T01:three_prime_UTR
CTTCAAGGCATCAAAGTTCA+CGG 0.543080 3:-73141623 MsG0380015653.01.T01:CDS
TTAACAAATGCACTGAGGCT+AGG 0.544105 3:-73142463 MsG0380015653.01.T01:CDS
CTTGAATCTTAATATTGTGA+TGG 0.548093 3:+73143792 None:intergenic
GCTTTCAAAATATACAAGAA+TGG 0.548305 3:-73140756 MsG0380015653.01.T01:CDS
GAGCTTCTTGCAGAATCTGT+AGG 0.551456 3:+73143408 None:intergenic
AGGTGTGGATTCAGCTCCAA+AGG 0.554776 3:-73142387 MsG0380015653.01.T01:intron
AGACATTATGTAACTTCACC+TGG 0.555609 3:-73141132 MsG0380015653.01.T01:intron
TAAACATGCTTACAAGGCCA+TGG 0.556884 3:-73140549 MsG0380015653.01.T01:three_prime_UTR
ACCTTAAGAAAATTAACTGA+TGG 0.557145 3:+73140942 None:intergenic
GATTCAAAATTAATCATGGA+AGG 0.558610 3:-73143657 MsG0380015653.01.T01:exon
TGAAGTATATTGTCGCCAAA+CGG 0.565594 3:+73142851 None:intergenic
GACTTGGTTTCGCTGTCGCG+TGG 0.566037 3:+73143303 None:intergenic
ACTCAATCTGGCAGATGTTG+CGG 0.570103 3:+73141657 None:intergenic
CCATTGATTTCAATACCTCA+GGG 0.573023 3:+73143070 None:intergenic
GCCAAACGGCTATGAGCTCT+AGG 0.574655 3:+73142865 None:intergenic
AGAAAAGCCAGGGGATGAGG+AGG 0.578947 3:-73141268 MsG0380015653.01.T01:CDS
GTCTGCAATATCCTTAGGTG+TGG 0.580763 3:-73142402 MsG0380015653.01.T01:CDS
GCGAGCTGATTGCAATGCCA+AGG 0.582247 3:-73141434 MsG0380015653.01.T01:intron
AATATACAAGAATGGATCAA+GGG 0.584426 3:-73140748 MsG0380015653.01.T01:CDS
TGGAGCTGAATCCACACCTA+AGG 0.584616 3:+73142391 None:intergenic
GTGTAATGGGGAATATAATG+AGG 0.585539 3:-73143149 MsG0380015653.01.T01:CDS
CAACACCGATGTGGATGTAG+TGG 0.587230 3:-73141695 MsG0380015653.01.T01:CDS
AGCAAAGAAGAAAAGAGAGA+AGG 0.587879 3:+73143750 None:intergenic
GGAAATGAAGCTTACAAGCA+AGG 0.589526 3:-73143048 MsG0380015653.01.T01:CDS
ATGTTAATAAGAGAAAAGCC+AGG 0.590083 3:-73141279 MsG0380015653.01.T01:CDS
AATGTGCAATACATGAAAGA+TGG 0.592794 3:+73140391 None:intergenic
TGTTAATAAGAGAAAAGCCA+GGG 0.601275 3:-73141278 MsG0380015653.01.T01:CDS
CATTCAGCCTAATTATAGCA+AGG 0.602621 3:-73141467 MsG0380015653.01.T01:CDS
CTTGTGCTCCTATCATCAGA+AGG 0.605013 3:+73142094 None:intergenic
TGTGCTCAAATCTTTGCTTG+GGG 0.607808 3:+73143281 None:intergenic
CGGGACAGCATCACAGAAAG+CGG 0.609310 3:-73141734 MsG0380015653.01.T01:CDS
GCAACATCTGCCAGATTGAG+TGG 0.609313 3:-73141655 MsG0380015653.01.T01:CDS
GCAGCTTGTCGTTCTAAGCT+CGG 0.609881 3:-73141532 MsG0380015653.01.T01:CDS
TGAAGTCACAGAAGTAAGAG+TGG 0.610816 3:+73143711 None:intergenic
CATGTGCGGTATACAATGAA+GGG 0.611028 3:-73141597 MsG0380015653.01.T01:CDS
TGTGGATGTAGTGGTAAGAA+GGG 0.614347 3:-73141686 MsG0380015653.01.T01:CDS
ATGCCTTAGGAGCTTCAACA+AGG 0.615341 3:+73142203 None:intergenic
CACTGAGGCTAGGAAAGTCA+AGG 0.615808 3:-73142453 MsG0380015653.01.T01:CDS
ATTATAGCAAGGCAATGCTA+CGG 0.627435 3:-73141456 MsG0380015653.01.T01:CDS
AAAGTTCACGGAAGCATGTG+CGG 0.635125 3:-73141611 MsG0380015653.01.T01:CDS
TATGAGCTCTAGGATAAGAA+GGG 0.639646 3:+73142875 None:intergenic
TGATCCAAGCAACACCGATG+TGG 0.649575 3:-73141704 MsG0380015653.01.T01:CDS
ATAATGAGGAAAAGTGGTGA+TGG 0.650834 3:-73143135 MsG0380015653.01.T01:CDS
TGAGCACACCAAAACTCACT+GGG 0.651240 3:-73143266 MsG0380015653.01.T01:CDS
GCATGCAATTGTTGAGTGTG+AGG 0.654525 3:-73142914 MsG0380015653.01.T01:CDS
AGAAAACCCAAAATAAACCA+AGG 0.669668 3:-73140572 MsG0380015653.01.T01:three_prime_UTR
AGGAAGAATCAATAAGAACA+AGG 0.671229 3:-73143637 MsG0380015653.01.T01:CDS
AAGAATCAATAAGAACAAGG+TGG 0.684298 3:-73143634 MsG0380015653.01.T01:CDS
CAACAGAATACTAGACCCTG+AGG 0.714984 3:-73143085 MsG0380015653.01.T01:CDS
CTAAAACTCAAAATGCTACG+TGG 0.718615 3:-73141219 MsG0380015653.01.T01:CDS
GTTAATAAGAGAAAAGCCAG+GGG 0.722465 3:-73141277 MsG0380015653.01.T01:CDS
TCTTACCACTACATCCACAT+CGG 0.722631 3:+73141690 None:intergenic
CTGTGAATAACAGTGTAATG+GGG 0.729138 3:-73143161 MsG0380015653.01.T01:CDS
GTTATTCACAGAACAAGACA+CGG 0.733993 3:+73143173 None:intergenic
TAAATGAACAGGCATGTCTG+TGG 0.736229 3:-73141033 MsG0380015653.01.T01:intron
TCACTTTAACAAATGCACTG+AGG 0.748098 3:-73142468 MsG0380015653.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTATTAATGTAATCAA+AGG - Chr3:73143758-73143777 MsG0380015653.01.T01:five_prime_UTR 10.0%
!!! GGATTTATAATTTTATTTTT+AGG - Chr3:73143213-73143232 MsG0380015653.01.T01:CDS 10.0%
!!! TTTATAATTTTATTTTTAGG+TGG - Chr3:73143216-73143235 MsG0380015653.01.T01:CDS 10.0%
!! ATTAAACTTTACTATATACT+TGG - Chr3:73142658-73142677 MsG0380015653.01.T01:intron 15.0%
!! TATTTAATTACAAATTGATC+TGG + Chr3:73141394-73141413 None:intergenic 15.0%
!!! AAAAATACTGTTTCTTATAA+TGG - Chr3:73143192-73143211 MsG0380015653.01.T01:CDS 15.0%
!!! ATGTATAAGTTATATTTTAG+AGG - Chr3:73143710-73143729 MsG0380015653.01.T01:five_prime_UTR 15.0%
!! ACAAATAATTGAAACTCATT+TGG - Chr3:73142225-73142244 MsG0380015653.01.T01:CDS 20.0%
!! ATAAAAATGCAAAACAACTT+AGG + Chr3:73142272-73142291 None:intergenic 20.0%
!! ATTTATTTAATCAGCATAAG+AGG + Chr3:73141781-73141800 None:intergenic 20.0%
!! TAAAAATGCAAAACAACTTA+GGG + Chr3:73142271-73142290 None:intergenic 20.0%
!! TAAAATAAAACATTTGACCA+AGG + Chr3:73141694-73141713 None:intergenic 20.0%
!! TCTTGATTCAAAATTAATCA+TGG - Chr3:73140387-73140406 MsG0380015653.01.T01:three_prime_UTR 20.0%
!! TTTATTTAATCAGCATAAGA+GGG + Chr3:73141780-73141799 None:intergenic 20.0%
!!! ACATATAAAAAAAAGTGTTC+AGG + Chr3:73143694-73143713 None:intergenic 20.0%
!!! AGAATTGAAAATTTTAATGC+AGG - Chr3:73141468-73141487 MsG0380015653.01.T01:CDS 20.0%
!!! CCTACATTTTTTAATCATAT+GGG - Chr3:73141719-73141738 MsG0380015653.01.T01:CDS 20.0%
!!! TCCTACATTTTTTAATCATA+TGG - Chr3:73141718-73141737 MsG0380015653.01.T01:CDS 20.0%
!!! TCTTATGCTGATTAAATAAA+TGG - Chr3:73141780-73141799 MsG0380015653.01.T01:intron 20.0%
!!! TTAGATTTTTCAGAATGAAA+GGG - Chr3:73143447-73143466 MsG0380015653.01.T01:CDS 20.0%
! AAATATACAAGAATGGATCA+AGG - Chr3:73143299-73143318 MsG0380015653.01.T01:CDS 25.0%
! AAATTCGATTGCATAGAATA+TGG + Chr3:73142958-73142977 None:intergenic 25.0%
! AACACCAATTTAGGAAATAA+GGG - Chr3:73142071-73142090 MsG0380015653.01.T01:intron 25.0%
! AATATACAAGAATGGATCAA+GGG - Chr3:73143300-73143319 MsG0380015653.01.T01:CDS 25.0%
! AATCCTTTGAATGTTTGATT+AGG - Chr3:73143617-73143636 MsG0380015653.01.T01:CDS 25.0%
! ACCTTAAGAAAATTAACTGA+TGG + Chr3:73143109-73143128 None:intergenic 25.0%
! CAAAAAAAGAACACCAATTT+AGG - Chr3:73142062-73142081 MsG0380015653.01.T01:intron 25.0%
! CATATAATAGTTGGAAAGAT+GGG - Chr3:73142723-73142742 MsG0380015653.01.T01:intron 25.0%
! CCCATATGATTAAAAAATGT+AGG + Chr3:73141722-73141741 None:intergenic 25.0%
! GATTCAAAATTAATCATGGA+AGG - Chr3:73140391-73140410 MsG0380015653.01.T01:three_prime_UTR 25.0%
! GATTGGTGTAACAAATTATT+TGG - Chr3:73141913-73141932 MsG0380015653.01.T01:intron 25.0%
! GCTTTCAAAATATACAAGAA+TGG - Chr3:73143292-73143311 MsG0380015653.01.T01:CDS 25.0%
!! ATGTTTACCTTGGTTTATTT+TGG + Chr3:73143486-73143505 None:intergenic 25.0%
!! ATTTAGAAATTAAAGCACCT+TGG + Chr3:73142634-73142653 None:intergenic 25.0%
!! CTTGAAATTTGGTTCAAATT+TGG - Chr3:73142867-73142886 MsG0380015653.01.T01:CDS 25.0%
!! CTTTACTATATACTTGGTTT+TGG - Chr3:73142664-73142683 MsG0380015653.01.T01:intron 25.0%
!! TCAGTTAATTTTCTTAAGGT+TGG - Chr3:73143109-73143128 MsG0380015653.01.T01:CDS 25.0%
!! TCCATCAGTTAATTTTCTTA+AGG - Chr3:73143105-73143124 MsG0380015653.01.T01:CDS 25.0%
!! TGTTTTTCGCATATAATAGT+TGG - Chr3:73142714-73142733 MsG0380015653.01.T01:intron 25.0%
!!! AATGAATTTGTTGCCAAAAA+AGG + Chr3:73142162-73142181 None:intergenic 25.0%
!!! AGAAACTCCATATTTTGATT+CGG - Chr3:73141526-73141545 MsG0380015653.01.T01:CDS 25.0%
!!! AGTTGTTTTGCATTTTTATG+TGG - Chr3:73142273-73142292 MsG0380015653.01.T01:intron 25.0%
!!! ATAATTTGTTACACCAATCA+AGG + Chr3:73141912-73141931 None:intergenic 25.0%
!!! ATGAATTTGTTGCCAAAAAA+GGG + Chr3:73142161-73142180 None:intergenic 25.0%
!!! GTTAGATTTTTCAGAATGAA+AGG - Chr3:73143446-73143465 MsG0380015653.01.T01:CDS 25.0%
!!! TAAGTTATATTTTAGAGGAG+TGG - Chr3:73143715-73143734 MsG0380015653.01.T01:five_prime_UTR 25.0%
!!! TATTGCTATTGATTCCAATA+AGG - Chr3:73141059-73141078 MsG0380015653.01.T01:intron 25.0%
!!! TGAAAATTTTAATGCAGGTT+GGG - Chr3:73141473-73141492 MsG0380015653.01.T01:CDS 25.0%
!!! TGCTTTTTAACATTTCAATG+TGG + Chr3:73142098-73142117 None:intergenic 25.0%
!!! TGTTTACCTTGGTTTATTTT+GGG + Chr3:73143485-73143504 None:intergenic 25.0%
!!! TTCTTGTATATTTTGAAAGC+TGG + Chr3:73143292-73143311 None:intergenic 25.0%
!!! TTGAAAATTTTAATGCAGGT+TGG - Chr3:73141472-73141491 MsG0380015653.01.T01:CDS 25.0%
AACTCATAAGCAAGTAGTAT+TGG - Chr3:73143057-73143076 MsG0380015653.01.T01:CDS 30.0%
AAGAATCAATAAGAACAAGG+TGG - Chr3:73140414-73140433 MsG0380015653.01.T01:three_prime_UTR 30.0%
AAGGTGGAAAAAGTTGTATT+AGG - Chr3:73140430-73140449 MsG0380015653.01.T01:three_prime_UTR 30.0%
AATCAAAGGAACATAATTGC+TGG - Chr3:73143772-73143791 MsG0380015653.01.T01:five_prime_UTR 30.0%
AATGTGCAATACATGAAAGA+TGG + Chr3:73143660-73143679 None:intergenic 30.0%
ACACAGCAAAAAGAATCAAA+AGG - Chr3:73140547-73140566 MsG0380015653.01.T01:three_prime_UTR 30.0%
AGAAAACCCAAAATAAACCA+AGG - Chr3:73143476-73143495 MsG0380015653.01.T01:CDS 30.0%
AGGAAGAATCAATAAGAACA+AGG - Chr3:73140411-73140430 MsG0380015653.01.T01:three_prime_UTR 30.0%
ATCTTTCATGTATTGCACAT+TGG - Chr3:73143659-73143678 MsG0380015653.01.T01:exon 30.0%
ATGTTAATAAGAGAAAAGCC+AGG - Chr3:73142769-73142788 MsG0380015653.01.T01:intron 30.0%
CACAGCAAAAAGAATCAAAA+GGG - Chr3:73140548-73140567 MsG0380015653.01.T01:three_prime_UTR 30.0%
CATAACAGAACTGAATTGAA+TGG + Chr3:73142489-73142508 None:intergenic 30.0%
CTAATCTTTCTAACATCTCA+TGG + Chr3:73143348-73143367 None:intergenic 30.0%
CTTCAATTGCTTTCTCAAAT+TGG + Chr3:73142542-73142561 None:intergenic 30.0%
GAACACCAATTTAGGAAATA+AGG - Chr3:73142070-73142089 MsG0380015653.01.T01:intron 30.0%
GATGTTAAGGACTTGAAATT+TGG - Chr3:73142856-73142875 MsG0380015653.01.T01:CDS 30.0%
GCATATAATAGTTGGAAAGA+TGG - Chr3:73142722-73142741 MsG0380015653.01.T01:intron 30.0%
GGATTGGAAAGTTATATTGA+AGG - Chr3:73141616-73141635 MsG0380015653.01.T01:CDS 30.0%
GTATTGTTAACACTCTTGAT+AGG + Chr3:73140529-73140548 None:intergenic 30.0%
TCTGTGAATAACAGTGTAAT+GGG - Chr3:73140886-73140905 MsG0380015653.01.T01:intron 30.0%
TCTTTGTAACACTTGTTCTT+GGG + Chr3:73140837-73140856 None:intergenic 30.0%
TGTTAATAAGAGAAAAGCCA+GGG - Chr3:73142770-73142789 MsG0380015653.01.T01:intron 30.0%
TTAGGGAAGTTTATAGGAAA+AGG - Chr3:73143563-73143582 MsG0380015653.01.T01:CDS 30.0%
TTCTGTGAATAACAGTGTAA+TGG - Chr3:73140885-73140904 MsG0380015653.01.T01:intron 30.0%
TTCTTTGTAACACTTGTTCT+TGG + Chr3:73140838-73140857 None:intergenic 30.0%
! TGATGAATTTCTGAGCTTTT+TGG + Chr3:73140491-73140510 None:intergenic 30.0%
!! TAAGCAAGTAGTATTGGTAT+TGG - Chr3:73143063-73143082 MsG0380015653.01.T01:CDS 30.0%
!! TAGCTTTTAGGGAAGTTTAT+AGG - Chr3:73143557-73143576 MsG0380015653.01.T01:CDS 30.0%
!!! GTAGCATTTTGAGTTTTAGT+TGG + Chr3:73142828-73142847 None:intergenic 30.0%
!!! TTATTTTTAGGTGGAGATTG+AGG - Chr3:73143225-73143244 MsG0380015653.01.T01:CDS 30.0%
AATCAGCATAAGAGGGTTAT+TGG + Chr3:73141773-73141792 None:intergenic 35.0%
ACAATGATAAGTCGCCTTAT+TGG + Chr3:73141076-73141095 None:intergenic 35.0%
ACTTATTCTTGCAAGTCCTA+AGG + Chr3:73140695-73140714 None:intergenic 35.0%
AGACATTATGTAACTTCACC+TGG - Chr3:73142916-73142935 MsG0380015653.01.T01:CDS 35.0%
AGCAAAGAAGAAAAGAGAGA+AGG + Chr3:73140301-73140320 None:intergenic 35.0%
AGTCCTAAGGAATTACCATT+AGG + Chr3:73140682-73140701 None:intergenic 35.0%
ATAATGAGGAAAAGTGGTGA+TGG - Chr3:73140913-73140932 MsG0380015653.01.T01:intron 35.0%
ATTATAGCAAGGCAATGCTA+CGG - Chr3:73142592-73142611 MsG0380015653.01.T01:intron 35.0%
ATTCAACAGAAAGAGCCTAA+TGG - Chr3:73140664-73140683 MsG0380015653.01.T01:exon 35.0%
CAACAAAGACTTATCAGTTG+TGG - Chr3:73142991-73143010 MsG0380015653.01.T01:CDS 35.0%
CAGCCTAATCAAACATTCAA+AGG + Chr3:73143623-73143642 None:intergenic 35.0%
CATTCAGCCTAATTATAGCA+AGG - Chr3:73142581-73142600 MsG0380015653.01.T01:intron 35.0%
CTAAAACTCAAAATGCTACG+TGG - Chr3:73142829-73142848 MsG0380015653.01.T01:intron 35.0%
CTGTGAATAACAGTGTAATG+GGG - Chr3:73140887-73140906 MsG0380015653.01.T01:intron 35.0%
CTTAATCCTCTGAATTACGA+GGG - Chr3:73141278-73141297 MsG0380015653.01.T01:CDS 35.0%
GCAATGCTATACATTCTCTT+TGG + Chr3:73143535-73143554 None:intergenic 35.0%
GGGAATATAATGAGGAAAAG+TGG - Chr3:73140907-73140926 MsG0380015653.01.T01:intron 35.0%
GTTAATAAGAGAAAAGCCAG+GGG - Chr3:73142771-73142790 MsG0380015653.01.T01:intron 35.0%
GTTATTCACAGAACAAGACA+CGG + Chr3:73140878-73140897 None:intergenic 35.0%
TATATGCTTCTTGATGCCTT+AGG + Chr3:73141861-73141880 None:intergenic 35.0%
TCAAGGGTTAAAGAAATTCC+TGG - Chr3:73143316-73143335 MsG0380015653.01.T01:CDS 35.0%
TCACTTTAACAAATGCACTG+AGG - Chr3:73141580-73141599 MsG0380015653.01.T01:CDS 35.0%
TCAGTTGTGGATAAATGAAC+AGG - Chr3:73143004-73143023 MsG0380015653.01.T01:CDS 35.0%
TCTTAATCCTCTGAATTACG+AGG - Chr3:73141277-73141296 MsG0380015653.01.T01:CDS 35.0%
TGAAGTATATTGTCGCCAAA+CGG + Chr3:73141200-73141219 None:intergenic 35.0%
TGCCAAAATTTGACCTTGAT+TGG - Chr3:73141896-73141915 MsG0380015653.01.T01:intron 35.0%
TTAATCCTCTGAATTACGAG+GGG - Chr3:73141279-73141298 MsG0380015653.01.T01:CDS 35.0%
TTTGCATCTCAAGCAATGAT+AGG - Chr3:73142890-73142909 MsG0380015653.01.T01:CDS 35.0%
! ACCAAGAGTTATTTCAATCG+GGG - Chr3:73141352-73141371 MsG0380015653.01.T01:intron 35.0%
! AGCATTGCCTTGCTATAATT+AGG + Chr3:73142591-73142610 None:intergenic 35.0%
! AGTAAATTCCCAGTGAGTTT+TGG + Chr3:73140793-73140812 None:intergenic 35.0%
! ATAGCATTGCTGTAGCTTTT+AGG - Chr3:73143545-73143564 MsG0380015653.01.T01:CDS 35.0%
! CACCAATCAAGGTCAAATTT+TGG + Chr3:73141901-73141920 None:intergenic 35.0%
! CTTGCTATAATTAGGCTGAA+TGG + Chr3:73142583-73142602 None:intergenic 35.0%
! CTTTCTGATTTTGCCAAGTA+AGG + Chr3:73143256-73143275 None:intergenic 35.0%
! GACCAAGAGTTATTTCAATC+GGG - Chr3:73141351-73141370 MsG0380015653.01.T01:intron 35.0%
! GGACCAAGAGTTATTTCAAT+CGG - Chr3:73141350-73141369 MsG0380015653.01.T01:intron 35.0%
! GTGTAATGGGGAATATAATG+AGG - Chr3:73140899-73140918 MsG0380015653.01.T01:intron 35.0%
! TAGCATTGCTGTAGCTTTTA+GGG - Chr3:73143546-73143565 MsG0380015653.01.T01:CDS 35.0%
! TCATGTATTGCACATTGGTT+TGG - Chr3:73143664-73143683 MsG0380015653.01.T01:exon 35.0%
! TCTAGTATTCTGTTGCTTCT+AGG + Chr3:73140958-73140977 None:intergenic 35.0%
! TCTTTGGTTTCAACTTTCCA+TGG + Chr3:73143519-73143538 None:intergenic 35.0%
! TGGTCCCTTATTTCCTAAAT+TGG + Chr3:73142078-73142097 None:intergenic 35.0%
!! AATAAGAGTGCTGCTTTGAT+TGG - Chr3:73141096-73141115 MsG0380015653.01.T01:intron 35.0%
!! CATGTATTGCACATTGGTTT+GGG - Chr3:73143665-73143684 MsG0380015653.01.T01:five_prime_UTR 35.0%
!! CCATTGATTTCAATACCTCA+GGG + Chr3:73140981-73141000 None:intergenic 35.0%
!! CCTGAGGTATTGAAATCAAT+GGG - Chr3:73140979-73140998 MsG0380015653.01.T01:CDS 35.0%
!! GGAACTTTTGACTCATGATT+TGG + Chr3:73140577-73140596 None:intergenic 35.0%
!! TATGAGCTCTAGGATAAGAA+GGG + Chr3:73141176-73141195 None:intergenic 35.0%
!!! AAATCAGGCTTTCCCTTTTT+TGG - Chr3:73142146-73142165 MsG0380015653.01.T01:CDS 35.0%
!!! TCCATATTTTGATTCGGAAC+TGG - Chr3:73141532-73141551 MsG0380015653.01.T01:CDS 35.0%
ACACAGTCTGCAATATCCTT+AGG - Chr3:73141641-73141660 MsG0380015653.01.T01:CDS 40.0%
ACCCCGATTGAAATAACTCT+TGG + Chr3:73141356-73141375 None:intergenic 40.0%
AGAAGGTAAGCACTAGAAAC+TGG + Chr3:73141940-73141959 None:intergenic 40.0%
AGGGTTATTGGTCAATGAGT+TGG + Chr3:73141761-73141780 None:intergenic 40.0%
AGTGCTTACCTTCTGATGAT+AGG - Chr3:73141946-73141965 MsG0380015653.01.T01:intron 40.0%
ATCCGAACTCAAGATTACCA+GGG + Chr3:73141313-73141332 None:intergenic 40.0%
ATGTGGATGTAGTGGTAAGA+AGG - Chr3:73142361-73142380 MsG0380015653.01.T01:intron 40.0%
CAGTTTGTAAAGCATAGACC+TGG + Chr3:73141822-73141841 None:intergenic 40.0%
CATGTGCGGTATACAATGAA+GGG - Chr3:73142451-73142470 MsG0380015653.01.T01:CDS 40.0%
CCAAGGTAAACATGCTTACA+AGG - Chr3:73143493-73143512 MsG0380015653.01.T01:CDS 40.0%
CCTTGTAAGCATGTTTACCT+TGG + Chr3:73143496-73143515 None:intergenic 40.0%
GAGCCTAATGGTAATTCCTT+AGG - Chr3:73140676-73140695 MsG0380015653.01.T01:exon 40.0%
GAGCTCAATCGCTTAGTTAA+TGG - Chr3:73141430-73141449 MsG0380015653.01.T01:intron 40.0%
GCCAGTTCCGAATCAAAATA+TGG + Chr3:73141536-73141555 None:intergenic 40.0%
GGAAATGAAGCTTACAAGCA+AGG - Chr3:73141000-73141019 MsG0380015653.01.T01:CDS 40.0%
GGAATCAAACATGACTTACC+AGG + Chr3:73142937-73142956 None:intergenic 40.0%
GGATGGGAAGTAAGTTAAGT+CGG - Chr3:73141329-73141348 MsG0380015653.01.T01:intron 40.0%
GGTTATGACTTATGTCTACC+AGG - Chr3:73141801-73141820 MsG0380015653.01.T01:intron 40.0%
GTATTAGGCTGCACTTTCAT+GGG - Chr3:73140445-73140464 MsG0380015653.01.T01:three_prime_UTR 40.0%
GTGTGCTCAAATCTTTGCTT+GGG + Chr3:73140771-73140790 None:intergenic 40.0%
GTTTGGCGACAATATACTTC+AGG - Chr3:73141199-73141218 MsG0380015653.01.T01:CDS 40.0%
TAAACATGCTTACAAGGCCA+TGG - Chr3:73143499-73143518 MsG0380015653.01.T01:CDS 40.0%
TAAATGAACAGGCATGTCTG+TGG - Chr3:73143015-73143034 MsG0380015653.01.T01:CDS 40.0%
TAATCCTCTGAATTACGAGG+GGG - Chr3:73141280-73141299 MsG0380015653.01.T01:CDS 40.0%
TCTTACCACTACATCCACAT+CGG + Chr3:73142361-73142380 None:intergenic 40.0%
TGAAGTCACAGAAGTAAGAG+TGG + Chr3:73140340-73140359 None:intergenic 40.0%
TGACCAAGGAAACTAACCTT+TGG + Chr3:73141680-73141699 None:intergenic 40.0%
TGGTAATCTTGAGTTCGGAT+GGG - Chr3:73141313-73141332 MsG0380015653.01.T01:CDS 40.0%
TGTATTAGGCTGCACTTTCA+TGG - Chr3:73140444-73140463 MsG0380015653.01.T01:three_prime_UTR 40.0%
TGTGCTCAAATCTTTGCTTG+GGG + Chr3:73140770-73140789 None:intergenic 40.0%
TGTGGATGTAGTGGTAAGAA+GGG - Chr3:73142362-73142381 MsG0380015653.01.T01:intron 40.0%
TTAACAAATGCACTGAGGCT+AGG - Chr3:73141585-73141604 MsG0380015653.01.T01:CDS 40.0%
TTCAATCGGGGTTCAAACTT+GGG - Chr3:73141364-73141383 MsG0380015653.01.T01:intron 40.0%
TTGAGTGTGAGGAAGCTATT+AGG - Chr3:73141145-73141164 MsG0380015653.01.T01:CDS 40.0%
TTTCAATCGGGGTTCAAACT+TGG - Chr3:73141363-73141382 MsG0380015653.01.T01:intron 40.0%
TTTCTTGCTTGAGTCTCTGT+TGG + Chr3:73140598-73140617 None:intergenic 40.0%
! AAACATTTTCACCAACCTGC+CGG + Chr3:73141992-73142011 None:intergenic 40.0%
! AACATCTCATGGTTTTTGCC+AGG + Chr3:73143337-73143356 None:intergenic 40.0%
! CAAGCAAGGAAGATTTTCTG+AGG - Chr3:73141014-73141033 MsG0380015653.01.T01:CDS 40.0%
! CTGATTTTGCCAAGTAAGGA+TGG + Chr3:73143252-73143271 None:intergenic 40.0%
! CTTCAAGGCATCAAAGTTCA+CGG - Chr3:73142425-73142444 MsG0380015653.01.T01:CDS 40.0%
! GATAGGAGCACAAGTTTACT+TGG - Chr3:73141963-73141982 MsG0380015653.01.T01:intron 40.0%
! TTGCATTTTTATGTGGCGAC+AGG - Chr3:73142280-73142299 MsG0380015653.01.T01:intron 40.0%
!! AGTGCTGCTTTGATTGGTTT+GGG - Chr3:73141102-73141121 MsG0380015653.01.T01:intron 40.0%
!! CCCATTGATTTCAATACCTC+AGG + Chr3:73140982-73141001 None:intergenic 40.0%
!! CCCTGAGGTATTGAAATCAA+TGG - Chr3:73140978-73140997 MsG0380015653.01.T01:CDS 40.0%
!! CTATGAGCTCTAGGATAAGA+AGG + Chr3:73141177-73141196 None:intergenic 40.0%
!! GATGCTAAGTGCTGAAAATC+AGG - Chr3:73142131-73142150 MsG0380015653.01.T01:CDS 40.0%
!!! AGGAAGATTTTCTGAGGCTT+TGG - Chr3:73141020-73141039 MsG0380015653.01.T01:CDS 40.0%
ACTCAATCTGGCAGATGTTG+CGG + Chr3:73142394-73142413 None:intergenic 45.0%
AGGCTAGGAAAGTCAAGGAT+TGG - Chr3:73141600-73141619 MsG0380015653.01.T01:CDS 45.0%
ATGCCTTAGGAGCTTCAACA+AGG + Chr3:73141848-73141867 None:intergenic 45.0%
CAAATCTTTGCTTGGGGACT+TGG + Chr3:73140764-73140783 None:intergenic 45.0%
CAACAGAATACTAGACCCTG+AGG - Chr3:73140963-73140982 MsG0380015653.01.T01:CDS 45.0%
CATCCGAACTCAAGATTACC+AGG + Chr3:73141314-73141333 None:intergenic 45.0%
CTGGTAATCTTGAGTTCGGA+TGG - Chr3:73141312-73141331 MsG0380015653.01.T01:CDS 45.0%
CTTGTGCTCCTATCATCAGA+AGG + Chr3:73141957-73141976 None:intergenic 45.0%
GACCCTGGTAATCTTGAGTT+CGG - Chr3:73141308-73141327 MsG0380015653.01.T01:CDS 45.0%
GAGCAAGTTACCACTCAATC+TGG + Chr3:73142406-73142425 None:intergenic 45.0%
GAGCTTCTTGCAGAATCTGT+AGG + Chr3:73140643-73140662 None:intergenic 45.0%
GATTGAGGACCATCCTTACT+TGG - Chr3:73143240-73143259 MsG0380015653.01.T01:CDS 45.0%
GCATGCAATTGTTGAGTGTG+AGG - Chr3:73141134-73141153 MsG0380015653.01.T01:CDS 45.0%
GCATGTGCGGTATACAATGA+AGG - Chr3:73142450-73142469 MsG0380015653.01.T01:CDS 45.0%
GGTGTGCTCAAATCTTTGCT+TGG + Chr3:73140772-73140791 None:intergenic 45.0%
GTCTGCAATATCCTTAGGTG+TGG - Chr3:73141646-73141665 MsG0380015653.01.T01:CDS 45.0%
TGAGCACACCAAAACTCACT+GGG - Chr3:73140782-73140801 MsG0380015653.01.T01:CDS 45.0%
TTGAGCACACCAAAACTCAC+TGG - Chr3:73140781-73140800 MsG0380015653.01.T01:CDS 45.0%
TTTATGTGGCGACAGGTTTG+AGG - Chr3:73142287-73142306 MsG0380015653.01.T01:intron 45.0%
! AAAGTTCACGGAAGCATGTG+CGG - Chr3:73142437-73142456 MsG0380015653.01.T01:CDS 45.0%
! TGTGGTGCTCTTTTGCAACA+AGG - Chr3:73143033-73143052 MsG0380015653.01.T01:CDS 45.0%
!! AAGCCTTGTTGAAGCTCCTA+AGG - Chr3:73141842-73141861 MsG0380015653.01.T01:intron 45.0%
!! CTGCTTTGATTGGTTTGGGA+AGG - Chr3:73141106-73141125 MsG0380015653.01.T01:intron 45.0%
!! GAGTGCTGCTTTGATTGGTT+TGG - Chr3:73141101-73141120 MsG0380015653.01.T01:intron 45.0%
!! GAGTGGTAACTTGCTCTTCA+AGG - Chr3:73142410-73142429 MsG0380015653.01.T01:CDS 45.0%
!! GCTCCAAAGGTTAGTTTCCT+TGG - Chr3:73141674-73141693 MsG0380015653.01.T01:CDS 45.0%
!! ATTACATTAATAATTTAAAA+TGG + Chr3:73143755-73143774 None:intergenic 5.0%
!! TAATAAATTATTTAAATGTT+AGG - Chr3:73142026-73142045 MsG0380015653.01.T01:intron 5.0%
AAGAGAAAAGCCAGGGGATG+AGG - Chr3:73142777-73142796 MsG0380015653.01.T01:intron 50.0%
AGGTGTGGATTCAGCTCCAA+AGG - Chr3:73141661-73141680 MsG0380015653.01.T01:CDS 50.0%
CAACACCGATGTGGATGTAG+TGG - Chr3:73142353-73142372 MsG0380015653.01.T01:intron 50.0%
CACTGAGGCTAGGAAAGTCA+AGG - Chr3:73141595-73141614 MsG0380015653.01.T01:CDS 50.0%
CTTTCCCCCTCGTAATTCAG+AGG + Chr3:73141287-73141306 None:intergenic 50.0%
GAACTTGAAGAGCCTGAGCT+TGG + Chr3:73141562-73141581 None:intergenic 50.0%
GCAACATCTGCCAGATTGAG+TGG - Chr3:73142393-73142412 MsG0380015653.01.T01:CDS 50.0%
GCACAAGTTTACTTGGCAGC+CGG - Chr3:73141970-73141989 MsG0380015653.01.T01:intron 50.0%
GCTACGTGGCGAAGATGTTA+AGG - Chr3:73142843-73142862 MsG0380015653.01.T01:intron 50.0%
TCCTAGAGCTCATAGCCGTT+TGG - Chr3:73141182-73141201 MsG0380015653.01.T01:CDS 50.0%
TGATCCAAGCAACACCGATG+TGG - Chr3:73142344-73142363 MsG0380015653.01.T01:intron 50.0%
TGGAGCTGAATCCACACCTA+AGG + Chr3:73141660-73141679 None:intergenic 50.0%
! GCAGCTTGTCGTTCTAAGCT+CGG - Chr3:73142516-73142535 MsG0380015653.01.T01:CDS 50.0%
!! ACATCCACATCGGTGTTGCT+TGG + Chr3:73142351-73142370 None:intergenic 50.0%
AAGTTTACTTGGCAGCCGGC+AGG - Chr3:73141974-73141993 MsG0380015653.01.T01:intron 55.0%
AGAAAAGCCAGGGGATGAGG+AGG - Chr3:73142780-73142799 MsG0380015653.01.T01:intron 55.0%
AGGGGATGAGGAGGTTGCTA+GGG - Chr3:73142789-73142808 MsG0380015653.01.T01:intron 55.0%
CGCTTTCTGTGATGCTGTCC+CGG + Chr3:73142316-73142335 None:intergenic 55.0%
CGGGACAGCATCACAGAAAG+CGG - Chr3:73142314-73142333 MsG0380015653.01.T01:intron 55.0%
GCCAAACGGCTATGAGCTCT+AGG + Chr3:73141186-73141205 None:intergenic 55.0%
GCGAGCTGATTGCAATGCCA+AGG - Chr3:73142614-73142633 MsG0380015653.01.T01:intron 55.0%
! CAGGTTGGGAGAAGCAGAGA+AGG - Chr3:73141487-73141506 MsG0380015653.01.T01:CDS 55.0%
CAGGGGATGAGGAGGTTGCT+AGG - Chr3:73142788-73142807 MsG0380015653.01.T01:intron 60.0%
CTAGCAACCTCCTCATCCCC+TGG + Chr3:73142790-73142809 None:intergenic 60.0%
GCGACAGGTTTGAGGATGCC+GGG - Chr3:73142295-73142314 MsG0380015653.01.T01:intron 60.0%
GGAACTGGCTGTCCAAGCTC+AGG - Chr3:73141547-73141566 MsG0380015653.01.T01:CDS 60.0%
GGCGACAGGTTTGAGGATGC+CGG - Chr3:73142294-73142313 MsG0380015653.01.T01:intron 60.0%
TACGAGGGGGAAAGTGACCC+TGG - Chr3:73141293-73141312 MsG0380015653.01.T01:CDS 60.0%
TTACTTGGCAGCCGGCAGGT+TGG - Chr3:73141978-73141997 MsG0380015653.01.T01:intron 60.0%
! GACTTGGTTTCGCTGTCGCG+TGG + Chr3:73140748-73140767 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 73140258 73143812 73140258 ID=MsG0380015653.01;Name=MsG0380015653.01
Chr3 mRNA 73140258 73143812 73140258 ID=MsG0380015653.01.T01;Parent=MsG0380015653.01;Name=MsG0380015653.01.T01;_AED=0.47;_eAED=0.47;_QI=148|1|1|1|1|1|7|425|657
Chr3 exon 73140258 73140835 73140258 ID=MsG0380015653.01.T01:exon:807;Parent=MsG0380015653.01.T01
Chr3 exon 73140944 73141044 73140944 ID=MsG0380015653.01.T01:exon:806;Parent=MsG0380015653.01.T01
Chr3 exon 73141133 73141337 73141133 ID=MsG0380015653.01.T01:exon:805;Parent=MsG0380015653.01.T01
Chr3 exon 73141435 73141768 73141435 ID=MsG0380015653.01.T01:exon:804;Parent=MsG0380015653.01.T01
Chr3 exon 73142075 73142247 73142075 ID=MsG0380015653.01.T01:exon:803;Parent=MsG0380015653.01.T01
Chr3 exon 73142388 73142580 73142388 ID=MsG0380015653.01.T01:exon:802;Parent=MsG0380015653.01.T01
Chr3 exon 73142850 73143812 73142850 ID=MsG0380015653.01.T01:exon:801;Parent=MsG0380015653.01.T01
Chr3 five_prime_UTR 73143665 73143812 73143665 ID=MsG0380015653.01.T01:five_prime_utr;Parent=MsG0380015653.01.T01
Chr3 CDS 73142850 73143664 73142850 ID=MsG0380015653.01.T01:cds;Parent=MsG0380015653.01.T01
Chr3 CDS 73142388 73142580 73142388 ID=MsG0380015653.01.T01:cds;Parent=MsG0380015653.01.T01
Chr3 CDS 73142075 73142247 73142075 ID=MsG0380015653.01.T01:cds;Parent=MsG0380015653.01.T01
Chr3 CDS 73141435 73141768 73141435 ID=MsG0380015653.01.T01:cds;Parent=MsG0380015653.01.T01
Chr3 CDS 73141133 73141337 73141133 ID=MsG0380015653.01.T01:cds;Parent=MsG0380015653.01.T01
Chr3 CDS 73140944 73141044 73140944 ID=MsG0380015653.01.T01:cds;Parent=MsG0380015653.01.T01
Chr3 CDS 73140683 73140835 73140683 ID=MsG0380015653.01.T01:cds;Parent=MsG0380015653.01.T01
Chr3 three_prime_UTR 73140258 73140682 73140258 ID=MsG0380015653.01.T01:three_prime_utr;Parent=MsG0380015653.01.T01
Gene Sequence

>MsG0380015653.01.T01

ATGGAAGGAAGAATCAATAAGAACAAGGTGGAAAAAGTTGTATTAGGCTGCACTTTCATGGGAAAAATCTTCAAATTCAAGACCAAAAAGCTCAGAAATTCATCATCTGTTCATTCACTACCTATCAAGAGTGTTAACAATACACAGCAAAAAGAATCAAAAGGGTCACCAAATCATGAGTCAAAAGTTCCAACAGAGACTCAAGCAAGAAAAAGCATCACTTTTTCTCACACACCTACAGATTCTGCAAGAAGCTCAATTCAACAGAAAGAGCCTAATGGTAATTCCTTAGGACTTGCAAGAATAAGTACTAGTACTAGTATTACTACTACTACTCGTCCACGCGACAGCGAAACCAAGTCCCCAAGCAAAGATTTGAGCACACCAAAACTCACTGGGAATTTACTTATGAATAGTAGCTATAGCAGCCCAAGAACAAGTGTTACAAAGAATAACAAAGAGTTGAATTCCGTGTCTTGTTCTGTGAATAACAGTGTAATGGGGAATATAATGAGGAAAAGTGGTGATGGTGTGTCGCAATTTCGAAGTCCTAGAAGCAACAGAATACTAGACCCTGAGGTATTGAAATCAATGGGAAATGAAGCTTACAAGCAAGGAAGATTTTCTGAGGCTTTGGCTTTATATGAACGAGCTATTGCTATTGATTCCAATAAGGCGACTTATCATTGTAATAAGAGTGCTGCTTTGATTGGTTTGGGAAGGTTTCAGCATGCAATTGTTGAGTGTGAGGAAGCTATTAGGATTGACCCTTCTTATCCTAGAGCTCATAGCCGTTTGGCGACAATATACTTCAGGTTGGGAGAAGCAGAGAAGGCATTGAATTGCGTTAAAGAAACTCCATATTTTGATTCGGAACTGGCTGTCCAAGCTCAGGCTCTTCAAGTTCACTTTAACAAATGCACTGAGGCTAGGAAAGTCAAGGATTGGAAAGTTATATTGAAGGAAACACAGTCTGCAATATCCTTAGGTGTGGATTCAGCTCCAAAGGTCTATGCTTTACAAACTGAAGCCTTGTTGAAGCTCCTAAGGCATCAAGAAGCATATATAATTTATGAGAGAATGCCAAAATTTGACCTTGATTGGTGTAACAAATTATTTGGACCAGTTTCTAGTGCTTACCTTCTGATGATAGGAGCACAAGTTTACTTGGCAGCCGGCAGGTTTGAGGATGCCGGGACAGCATCACAGAAAGCGGCTAAACTTGATCCAAGCAACACCGATGTGGATGTAGTGGTAAGAAGGGCAAGAGCCGCAACATCTGCCAGATTGAGTGGTAACTTGCTCTTCAAGGCATCAAAGTTCACGGAAGCATGTGCGGTATACAATGAAGGGCTAGAGTATGATCCATTCAATTCAGTTCTGTTATGTAACAGAGCAGCTTGTCGTTCTAAGCTCGGCCAATTTGAGAAAGCAATTGAAGACTGCAATGTAGCTCTTACCATTCAGCCTAATTATAGCAAGGCAATGCTACGGCGAGCTGATTGCAATGCCAAGTTGGAAAGATGGGAAGCTGCAATTCAAGACTACGAAATGTTAATAAGAGAAAAGCCAGGGGATGAGGAGGTTGCTAGGGCTTTGTTTGAAATCCAACTAAAACTCAAAATGCTACGTGGCGAAGATGTTAAGGACTTGAAATTTGGTTCAAATTTGGTTTGCATCTCAAGCAATGATAGGTTTAGACATTATGTAACTTCACCTGGCATGTCTGTGGTGCTCTTTTGCAACAAGGCAACTCATAAGCAAGTAGTATTGGTATTGGAGCAAACTTGCAAGAGATTTCCATCAGTTAATTTTCTTAAGGTGGAGATTGAGGACCATCCTTACTTGGCAAAATCAGAAAGTGTGAACTCTGTACCAGCTTTCAAAATATACAAGAATGGATCAAGGGTTAAAGAAATTCCTGGCAAAAACCATGAGATGTTAGAAAGATTAGTTAAATTATATAGCAGCTGA
Protein sequence

>MsG0380015653.01.T01

MEGRINKNKVEKVVLGCTFMGKIFKFKTKKLRNSSSVHSLPIKSVNNTQQKESKGSPNHESKVPTETQARKSITFSHTPTDSARSSIQQKEPNGNSLGLARISTSTSITTTTRPRDSETKSPSKDLSTPKLTGNLLMNSSYSSPRTSVTKNNKELNSVSCSVNNSVMGNIMRKSGDGVSQFRSPRSNRILDPEVLKSMGNEAYKQGRFSEALALYERAIAIDSNKATYHCNKSAALIGLGRFQHAIVECEEAIRIDPSYPRAHSRLATIYFRLGEAEKALNCVKETPYFDSELAVQAQALQVHFNKCTEARKVKDWKVILKETQSAISLGVDSAPKVYALQTEALLKLLRHQEAYIIYERMPKFDLDWCNKLFGPVSSAYLLMIGAQVYLAAGRFEDAGTASQKAAKLDPSNTDVDVVVRRARAATSARLSGNLLFKASKFTEACAVYNEGLEYDPFNSVLLCNRAACRSKLGQFEKAIEDCNVALTIQPNYSKAMLRRADCNAKLERWEAAIQDYEMLIREKPGDEEVARALFEIQLKLKMLRGEDVKDLKFGSNLVCISSNDRFRHYVTSPGMSVVLFCNKATHKQVVLVLEQTCKRFPSVNFLKVEIEDHPYLAKSESVNSVPAFKIYKNGSRVKEIPGKNHEMLERLVKLYSS*