AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024490.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024490.01.T01 MTR_5g012030 88.488 582 10 3 1 526 1 581 0.0 1033
MsG0580024490.01.T01 MTR_5g012050 71.429 105 29 1 185 289 3 106 3.74e-41 151
MsG0580024490.01.T01 MTR_1g041435 36.441 118 75 0 341 458 15 132 2.95e-19 89.4
MsG0580024490.01.T01 MTR_7g115280 34.211 114 75 0 337 450 335 448 1.36e-16 82.8
MsG0580024490.01.T01 MTR_7g115280 44.872 78 43 0 2 79 335 412 2.64e-11 66.2
MsG0580024490.01.T01 MTR_3g452710 45.455 88 48 0 2 89 11 98 1.86e-14 76.3
MsG0580024490.01.T01 MTR_3g452710 32.759 116 78 0 337 452 11 126 5.27e-13 71.6
MsG0580024490.01.T01 MTR_3g452710 45.455 88 48 0 2 89 11 98 3.39e-14 75.5
MsG0580024490.01.T01 MTR_3g452710 32.759 116 78 0 337 452 11 126 5.04e-13 72.0
MsG0580024490.01.T01 MTR_5g009930 38.043 92 57 0 1 92 1 92 2.15e-13 71.6
MsG0580024490.01.T01 MTR_5g009930 28.205 117 84 0 336 452 1 117 2.28e-11 65.5
MsG0580024490.01.T01 MTR_2g078020 30.476 105 73 0 341 445 466 570 4.73e-13 72.0
MsG0580024490.01.T01 MTR_2g078020 30.476 105 73 0 341 445 466 570 5.60e-13 72.0
MsG0580024490.01.T01 MTR_5g009930 38.043 92 57 0 1 92 1 92 5.60e-13 70.9
MsG0580024490.01.T01 MTR_5g009930 28.205 117 84 0 336 452 1 117 2.76e-11 65.9
MsG0580024490.01.T01 MTR_6g053290 40.217 92 55 0 1 92 1 92 1.23e-12 69.7
MsG0580024490.01.T01 MTR_6g053290 26.144 153 110 2 336 487 1 151 4.63e-11 65.1
MsG0580024490.01.T01 MTR_6g053290 40.217 92 55 0 1 92 1 92 1.40e-12 69.7
MsG0580024490.01.T01 MTR_6g053290 26.144 153 110 2 336 487 1 151 5.98e-11 64.7
MsG0580024490.01.T01 MTR_1g030300 31.092 119 81 1 329 446 173 291 1.97e-12 69.7
MsG0580024490.01.T01 MTR_4g094205 37.374 99 62 0 341 439 492 590 3.27e-12 69.3
MsG0580024490.01.T01 MTR_8g107280 29.630 135 89 1 311 439 447 581 1.32e-11 67.4
MsG0580024490.01.T01 MTR_7g059150 27.536 138 85 2 316 446 82 211 6.74e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024490.01.T01 AT1G62740 66.895 583 124 5 1 526 1 571 0.0 773
MsG0580024490.01.T01 AT4G12400 65.913 575 130 5 1 526 1 558 0.0 769
MsG0580024490.01.T01 AT1G12270 66.895 583 125 7 1 526 1 572 0.0 733
MsG0580024490.01.T01 AT4G12400 64.750 539 124 5 1 490 1 522 0.0 706
MsG0580024490.01.T01 AT4G12400 32.258 186 125 1 336 520 1 186 2.98e-22 100
MsG0580024490.01.T01 AT1G04190 39.623 106 64 0 341 446 19 124 9.67e-18 84.7
MsG0580024490.01.T01 AT1G04190 43.678 87 49 0 6 92 19 105 4.99e-14 73.6
MsG0580024490.01.T01 AT2G42810 31.429 140 96 0 333 472 9 148 7.89e-15 77.8
MsG0580024490.01.T01 AT2G42810 38.636 88 54 0 2 89 13 100 6.24e-12 68.6
MsG0580024490.01.T01 AT2G42810 31.429 140 96 0 333 472 9 148 7.93e-15 77.4
MsG0580024490.01.T01 AT2G42810 38.636 88 54 0 2 89 13 100 4.10e-12 68.9
MsG0580024490.01.T01 AT2G42810 31.429 140 96 0 333 472 9 148 7.93e-15 77.4
MsG0580024490.01.T01 AT2G42810 38.636 88 54 0 2 89 13 100 4.10e-12 68.9
MsG0580024490.01.T01 AT2G42810 31.429 140 96 0 333 472 9 148 7.93e-15 77.4
MsG0580024490.01.T01 AT2G42810 38.636 88 54 0 2 89 13 100 4.10e-12 68.9
MsG0580024490.01.T01 AT2G42810 31.429 140 96 0 333 472 9 148 8.04e-15 77.4
MsG0580024490.01.T01 AT2G42810 38.636 88 54 0 2 89 13 100 6.76e-12 68.6
MsG0580024490.01.T01 AT4G08320 33.094 139 86 3 316 452 158 291 5.80e-14 74.3
MsG0580024490.01.T01 AT4G08320 38.750 80 49 0 1 80 174 253 3.78e-11 65.5
MsG0580024490.01.T01 AT4G08320 33.094 139 86 3 316 452 158 291 6.04e-14 74.3
MsG0580024490.01.T01 AT4G08320 38.750 80 49 0 1 80 174 253 2.79e-11 66.2
MsG0580024490.01.T01 AT3G04710 30.841 107 74 0 343 449 334 440 1.27e-13 73.6
MsG0580024490.01.T01 AT3G04710 40.777 103 61 0 8 110 334 436 2.36e-12 69.7
MsG0580024490.01.T01 AT3G04710 30.841 107 74 0 343 449 333 439 1.27e-13 73.6
MsG0580024490.01.T01 AT3G04710 40.777 103 61 0 8 110 333 435 2.44e-12 69.3
MsG0580024490.01.T01 AT3G04710 30.841 107 74 0 343 449 558 664 2.10e-13 73.6
MsG0580024490.01.T01 AT3G04710 40.777 103 61 0 8 110 558 660 1.51e-12 70.9
MsG0580024490.01.T01 AT3G17970 35.922 103 66 0 337 439 474 576 2.77e-12 69.7
MsG0580024490.01.T01 AT4G22670 39.326 89 54 0 2 90 123 211 5.65e-12 68.2
MsG0580024490.01.T01 AT1G53300 28.829 111 79 0 335 445 463 573 6.80e-12 68.6
MsG0580024490.01.T01 AT4G11260 36.957 92 58 0 1 92 1 92 2.32e-11 65.9
MsG0580024490.01.T01 AT3G58620 26.923 156 97 3 293 446 418 558 5.72e-11 65.5
MsG0580024490.01.T01 AT3G58620 26.923 156 97 3 293 446 418 558 7.01e-11 65.5
MsG0580024490.01.T01 AT1G78120 29.600 125 87 1 344 467 166 290 7.09e-11 65.1
MsG0580024490.01.T01 AT1G78120 29.600 125 87 1 344 467 166 290 7.67e-11 64.7

Find 170 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCTCATCAGCCAAATT+TGG 0.136072 5:+5514000 None:intergenic
CAGCTTCATTGAGTTTCTTC+AGG 0.191835 5:+5514064 None:intergenic
AGAATACTTCGATCCAAATT+TGG 0.199740 5:-5514013 MsG0580024490.01.T01:CDS
TTGAGTTTCTTCAGGGTGTC+TGG 0.227086 5:+5514072 None:intergenic
TTGTTGTTCTAGTTCTTTCT+TGG 0.227451 5:+5514035 None:intergenic
CAGAGAGTTATGCAAGCTTT+TGG 0.262229 5:-5516467 MsG0580024490.01.T01:CDS
TCCATCAAATTTACTTCATC+TGG 0.263023 5:+5512940 None:intergenic
TTCCGGCACTGATCAGCTTT+TGG 0.271295 5:+5512967 None:intergenic
GTCCATCACACCCGGGTTCT+TGG 0.290667 5:+5512995 None:intergenic
CATCATGTTTCAACCCTTCC+TGG 0.293057 5:+5513497 None:intergenic
GCAGGTATTGGTTGATTTCC+AGG 0.298727 5:-5513045 MsG0580024490.01.T01:intron
AGCTGCATGTTACACAAAAC+TGG 0.310459 5:-5513650 MsG0580024490.01.T01:CDS
TCCTCCATTGGCTCCGGTTC+CGG 0.312001 5:+5516317 None:intergenic
TCCGAACTGGACGGCATATC+AGG 0.312824 5:+5516395 None:intergenic
AAGCAAACCTGTCTCATAAC+AGG 0.314328 5:+5513143 None:intergenic
TTCCTATTGTGACTTTGATT+TGG 0.317739 5:-5512881 MsG0580024490.01.T01:three_prime_UTR
GGCAATGCCTGAAGGTTTAA+AGG 0.321704 5:-5513626 MsG0580024490.01.T01:CDS
TCCAGATGAAGTAAATTTGA+TGG 0.333610 5:-5512941 MsG0580024490.01.T01:exon
GCTGATGAGGAGAGAGAAAA+AGG 0.335378 5:-5513991 MsG0580024490.01.T01:intron
TTAAAGCGTCAGTGTAATTC+TGG 0.337616 5:+5516862 None:intergenic
AAAACTGAACCGCACCCTTC+CGG 0.339040 5:+5513554 None:intergenic
GTATGTTCCTGTGCAGCCTT+TGG 0.339809 5:+5513017 None:intergenic
TCTGCATCCTTTAAACCTTC+AGG 0.340625 5:+5513619 None:intergenic
TGTCTCTCCTTCAACTCTTC+AGG 0.344507 5:+5513299 None:intergenic
TGGTTATTCAATCTAAATCT+AGG 0.345616 5:-5512717 MsG0580024490.01.T01:three_prime_UTR
AAACTGAACCGCACCCTTCC+GGG 0.362337 5:+5513555 None:intergenic
GAACCCCTTCAAGCAATTCC+TGG 0.364967 5:+5513467 None:intergenic
TTATTCGAAAGCTTTGGAAT+TGG 0.368370 5:-5516183 MsG0580024490.01.T01:CDS
TTACTTCATCTGGACAATTC+CGG 0.371932 5:+5512950 None:intergenic
TAACCGTGCTGCTGTATACT+TGG 0.383148 5:-5516135 MsG0580024490.01.T01:CDS
CTGTAACCCTTTGACCAATC+AGG 0.384513 5:+5516810 None:intergenic
CGTCTCGGTGCCGCTCATCT+TGG 0.384527 5:-5516786 MsG0580024490.01.T01:intron
ATTGGCTCCGGTTCCGGCTC+AGG 0.388295 5:+5516323 None:intergenic
GGAGAATGCAGCGTTGCCTT+TGG 0.390754 5:+5516989 None:intergenic
TCTGCATTATTCGAAAGCTT+TGG 0.393752 5:-5516189 MsG0580024490.01.T01:CDS
TCCGCCTGCTTTGCCACCTC+AGG 0.396836 5:+5516353 None:intergenic
GTCTCATAACAGGGTCTTGA+AGG 0.401205 5:+5513153 None:intergenic
TTCTAGGCCACGTTCTGCGC+CGG 0.406464 5:-5516647 MsG0580024490.01.T01:CDS
TGAAGGATGTTCTGAATCTC+TGG 0.407523 5:+5513170 None:intergenic
TCTTCAGGGTGTCTGGGTTA+CGG 0.408287 5:+5514079 None:intergenic
CAGCGGATCGGTTGGAATAC+AGG 0.412654 5:+5516898 None:intergenic
TGAAGATAAACCCTAGTTGT+AGG 0.413840 5:+5516562 None:intergenic
GTGTAATGCTTAATAGCTTC+AGG 0.414719 5:+5513804 None:intergenic
GCGCCGGGTGCCAATCCGTT+TGG 0.416911 5:-5516631 MsG0580024490.01.T01:CDS
TGGATTGGAAGTACAATAGT+TGG 0.420764 5:-5512845 MsG0580024490.01.T01:three_prime_UTR
TCTAGGCCACGTTCTGCGCC+GGG 0.422100 5:-5516646 MsG0580024490.01.T01:CDS
GATTTGGTATTGGAATAGAT+TGG 0.424663 5:-5512865 MsG0580024490.01.T01:three_prime_UTR
GAAAGAATATGAAAAGGCTT+TGG 0.427879 5:-5513527 MsG0580024490.01.T01:CDS
AGCTTCATTGAGTTTCTTCA+GGG 0.428316 5:+5514065 None:intergenic
TTGTGACTTTGATTTGGTAT+TGG 0.428426 5:-5512875 MsG0580024490.01.T01:three_prime_UTR
TGCTGCTGTATACTTGGAAA+TGG 0.437857 5:-5516129 MsG0580024490.01.T01:CDS
TGAACCTGAGGTGGCAAAGC+AGG 0.443025 5:-5516357 MsG0580024490.01.T01:CDS
CTCAAACCTGATTGGTCAAA+GGG 0.450036 5:-5516816 MsG0580024490.01.T01:CDS
TGAAGAGTTGAAGGAGAGAC+AGG 0.450058 5:-5513297 MsG0580024490.01.T01:intron
TGAGTTTCTTCAGGGTGTCT+GGG 0.451649 5:+5514073 None:intergenic
GGTTGAGCCTGAGCCGGAAC+CGG 0.452769 5:-5516330 MsG0580024490.01.T01:CDS
GGAGGTGGCTGATGAGGAGA+AGG 0.455482 5:-5516297 MsG0580024490.01.T01:CDS
TCATCAGCCACCTCCTCCAT+TGG 0.457433 5:+5516305 None:intergenic
TACCAAATCAAAGTCACAAT+AGG 0.459976 5:+5512879 None:intergenic
TGGATCTTGTCCATCACACC+CGG 0.459995 5:+5512987 None:intergenic
GAGGAAGGCTGAGGCGCAGA+AGG 0.460304 5:-5516264 MsG0580024490.01.T01:CDS
GGCTTTAGCTTCGTCGGCCA+TGG 0.464637 5:+5517010 None:intergenic
TCAAGACCCTGTTATGAGAC+AGG 0.467657 5:-5513150 MsG0580024490.01.T01:intron
CTTAATGTTAAGATTGGAAG+AGG 0.468931 5:-5516437 MsG0580024490.01.T01:CDS
AGCTCTCTTCCTCTCCGAAC+TGG 0.469541 5:+5516382 None:intergenic
GCCTGATATGCCGTCCAGTT+CGG 0.472399 5:-5516396 MsG0580024490.01.T01:CDS
GTCGTGTGCATGCTTTCAAT+TGG 0.473573 5:-5512737 MsG0580024490.01.T01:three_prime_UTR
AGGAACTGCCATGGGTAAAA+CGG 0.477231 5:-5514163 MsG0580024490.01.T01:CDS
CGATCCAAATTTGGCTGATG+AGG 0.478253 5:-5514004 MsG0580024490.01.T01:CDS
GGATTGGAAGTACAATAGTT+GGG 0.482953 5:-5512844 MsG0580024490.01.T01:three_prime_UTR
TGTAACTCCTGAAGAGTTGA+AGG 0.487207 5:-5513306 MsG0580024490.01.T01:CDS
TTTCATGAAAGAATATGAAA+AGG 0.488950 5:-5513533 MsG0580024490.01.T01:CDS
GAAGTAAATTTGATGGAAGA+TGG 0.489595 5:-5512934 MsG0580024490.01.T01:exon
TACTGCTGATCCTACAACTA+GGG 0.494571 5:-5516572 MsG0580024490.01.T01:intron
GGAAAATCCAAAGGCTGCAC+AGG 0.497888 5:-5513024 MsG0580024490.01.T01:CDS
GCGCAGAAGGAGAAGGAGGC+TGG 0.498289 5:-5516251 MsG0580024490.01.T01:CDS
GGTATTGGAATAGATTGGAT+TGG 0.499629 5:-5512860 MsG0580024490.01.T01:three_prime_UTR
ACCCTTCCGGGTATAACCCT+TGG 0.502655 5:+5513567 None:intergenic
GCCACCTCCTCCATTGGCTC+CGG 0.504102 5:+5516311 None:intergenic
TGAGCCGGAACCGGAGCCAA+TGG 0.504535 5:-5516321 MsG0580024490.01.T01:CDS
ATCCAAAAGCTGATCAGTGC+CGG 0.507708 5:-5512969 MsG0580024490.01.T01:CDS
TATAACCCTTGGTGAAGGTC+GGG 0.507749 5:+5513578 None:intergenic
ACCGGAGCCAATGGAGGAGG+TGG 0.508880 5:-5516312 MsG0580024490.01.T01:CDS
AACAACCAGGAATTGCTTGA+AGG 0.509120 5:-5513472 MsG0580024490.01.T01:CDS
GCCTTTGGCTTTAGCTTCGT+CGG 0.510652 5:+5517004 None:intergenic
GTAAGTTTCGCCCACATCTC+CGG 0.511152 5:+5516592 None:intergenic
GGCGGAGGTTGAGCCTGAGC+CGG 0.511864 5:-5516336 MsG0580024490.01.T01:CDS
AGGAGAAGGAAGTGAAGCAG+AGG 0.515007 5:-5516283 MsG0580024490.01.T01:CDS
AGGAGTTACATCCCCACGAC+TGG 0.518165 5:+5513319 None:intergenic
TACCAAGAACCCGGGTGTGA+TGG 0.520879 5:-5512997 MsG0580024490.01.T01:CDS
AGCGTGAGCAGCGGATCGGT+TGG 0.522057 5:+5516890 None:intergenic
GTTGGAATACAGGACGTGAT+TGG 0.525153 5:+5516908 None:intergenic
GAATACAGGACGTGATTGGT+GGG 0.529765 5:+5516912 None:intergenic
GTATAACCCTTGGTGAAGGT+CGG 0.529921 5:+5513577 None:intergenic
TTGCATAAAAGATTGTGATA+AGG 0.530466 5:-5514250 MsG0580024490.01.T01:CDS
ATACAGGACGTGATTGGTGG+GGG 0.535184 5:+5516914 None:intergenic
GCAAGAGCTTTGACAAGGAA+AGG 0.536678 5:-5514183 MsG0580024490.01.T01:CDS
AATGGAGGAGGTGGCTGATG+AGG 0.538534 5:-5516303 MsG0580024490.01.T01:CDS
AGCAGCACGGTTAGTGAGGA+AGG 0.539890 5:+5516145 None:intergenic
TGAGGTGGCAAAGCAGGCGG+AGG 0.540052 5:-5516351 MsG0580024490.01.T01:CDS
CCGTCGAACTCAAACCTGAT+TGG 0.540548 5:-5516824 MsG0580024490.01.T01:CDS
AAAAGCATCACCAAACGGAT+TGG 0.541023 5:+5516621 None:intergenic
GGGTTATACCCGGAAGGGTG+CGG 0.542682 5:-5513563 MsG0580024490.01.T01:CDS
CCAATCAGGTTTGAGTTCGA+CGG 0.546460 5:+5516824 None:intergenic
GGCTGAGGCGCAGAAGGAGA+AGG 0.547847 5:-5516258 MsG0580024490.01.T01:CDS
ACAACCAGGAATTGCTTGAA+GGG 0.548142 5:-5513471 MsG0580024490.01.T01:CDS
GAAACTCAATGAAGCTGAGA+AGG 0.551120 5:-5514058 MsG0580024490.01.T01:CDS
GCTGCTGTATACTTGGAAAT+GGG 0.551340 5:-5516128 MsG0580024490.01.T01:CDS
GGCAACGCTGCATTCTCCTC+CGG 0.551432 5:-5516984 MsG0580024490.01.T01:CDS
GGAACCGGAGCCAATGGAGG+AGG 0.554085 5:-5516315 MsG0580024490.01.T01:CDS
GGAATACAGGACGTGATTGG+TGG 0.554167 5:+5516911 None:intergenic
AGCTTTGGAATTGGATGATG+AGG 0.555608 5:-5516174 MsG0580024490.01.T01:CDS
GAAGAGAGCTGCTGAACCTG+AGG 0.556646 5:-5516369 MsG0580024490.01.T01:CDS
AAATTAATAGAACCAGTCGT+GGG 0.560810 5:-5513331 MsG0580024490.01.T01:CDS
ACTCAAACCTGATTGGTCAA+AGG 0.563775 5:-5516817 MsG0580024490.01.T01:CDS
TCAAAGGGTTACAGCCGTCT+CGG 0.565098 5:-5516801 MsG0580024490.01.T01:CDS
TGGAAGAGGTGGTGATGATG+TGG 0.569802 5:-5516423 MsG0580024490.01.T01:CDS
TGTGATAAGGCTGTTGAAAG+AGG 0.569985 5:-5514237 MsG0580024490.01.T01:CDS
TAATGCTGCGTATAAGAAGA+AGG 0.570012 5:-5516228 MsG0580024490.01.T01:CDS
TCACCAAACGGATTGGCACC+CGG 0.570986 5:+5516628 None:intergenic
CAAGATGAGCGGCACCGAGA+CGG 0.571843 5:+5516787 None:intergenic
TGTATACTTGGAAATGGGAA+AGG 0.572009 5:-5516123 MsG0580024490.01.T01:intron
TTGGCACCCGGCGCAGAACG+TGG 0.574389 5:+5516640 None:intergenic
CACCAAGGGTTATACCCGGA+AGG 0.575257 5:-5513569 MsG0580024490.01.T01:CDS
CTTTGGAAACATACCAGGAA+GGG 0.575984 5:-5513510 MsG0580024490.01.T01:CDS
AATTGCTTGAAGGGGTTCGA+AGG 0.576444 5:-5513462 MsG0580024490.01.T01:intron
GCTGCATGTTACACAAAACT+GGG 0.580641 5:-5513649 MsG0580024490.01.T01:CDS
ACCTGAGGTGGCAAAGCAGG+CGG 0.581309 5:-5516354 MsG0580024490.01.T01:CDS
CCGGGTATAACCCTTGGTGA+AGG 0.581722 5:+5513573 None:intergenic
GAAGGAAGTGAAGCAGAGGA+AGG 0.582452 5:-5516279 MsG0580024490.01.T01:CDS
AGTGAAGCAGAGGAAGGCTG+AGG 0.583668 5:-5516273 MsG0580024490.01.T01:CDS
TGAGGCGCAGAAGGAGAAGG+AGG 0.586945 5:-5516255 MsG0580024490.01.T01:CDS
ATACAGCAGCACGGTTAGTG+AGG 0.589306 5:+5516141 None:intergenic
GAGAGCTGCTGAACCTGAGG+TGG 0.589705 5:-5516366 MsG0580024490.01.T01:CDS
CAAATTAATAGAACCAGTCG+TGG 0.592861 5:-5513332 MsG0580024490.01.T01:CDS
AATACAGGACGTGATTGGTG+GGG 0.593162 5:+5516913 None:intergenic
ACAAGGAAAGGAACTGCCAT+GGG 0.594542 5:-5514171 MsG0580024490.01.T01:CDS
GACAAGGAAAGGAACTGCCA+TGG 0.596247 5:-5514172 MsG0580024490.01.T01:CDS
GCCGGAACCGGAGCCAATGG+AGG 0.596557 5:-5516318 MsG0580024490.01.T01:CDS
TTACTGCTGATCCTACAACT+AGG 0.598575 5:-5516573 MsG0580024490.01.T01:CDS
AAAGGCTTTGGAAACATACC+AGG 0.604647 5:-5513515 MsG0580024490.01.T01:CDS
ACCAAGGGTTATACCCGGAA+GGG 0.604794 5:-5513568 MsG0580024490.01.T01:CDS
AATGTTAAGATTGGAAGAGG+TGG 0.604956 5:-5516434 MsG0580024490.01.T01:CDS
GAGAAGCGTGAGCAGCGGAT+CGG 0.606528 5:+5516886 None:intergenic
GATGGCGGTTGCGAAATCGC+CGG 0.612453 5:+5516965 None:intergenic
CAACCAGGAATTGCTTGAAG+GGG 0.617312 5:-5513470 MsG0580024490.01.T01:CDS
TGATTTCCAGGAAAATCCAA+AGG 0.618569 5:-5513033 MsG0580024490.01.T01:CDS
GCTTTGGAAACATACCAGGA+AGG 0.619719 5:-5513511 MsG0580024490.01.T01:CDS
ACAGGAACATACCAAGAACC+CGG 0.627654 5:-5513006 MsG0580024490.01.T01:CDS
CTTGACCCGACCTTCACCAA+GGG 0.628031 5:-5513583 MsG0580024490.01.T01:CDS
GCCGACGAAGCTAAAGCCAA+AGG 0.634082 5:-5517005 MsG0580024490.01.T01:CDS
CTCTTCCTCTCCGAACTGGA+CGG 0.634577 5:+5516386 None:intergenic
GGCGGTTGCGAAATCGCCGG+AGG 0.634986 5:+5516968 None:intergenic
CCTTCACCAAGGGTTATACC+CGG 0.641665 5:-5513573 MsG0580024490.01.T01:CDS
TGATGGCATCTGAGAAGTGA+CGG 0.645347 5:+5516943 None:intergenic
GGATCTTGTCCATCACACCC+GGG 0.653989 5:+5512988 None:intergenic
AGCAAACCTGTCTCATAACA+GGG 0.656878 5:+5513144 None:intergenic
GAAACATGATGCAAACAACC+AGG 0.657221 5:-5513485 MsG0580024490.01.T01:CDS
GCTTGACCCGACCTTCACCA+AGG 0.659770 5:-5513584 MsG0580024490.01.T01:CDS
AATTAATAGAACCAGTCGTG+GGG 0.662286 5:-5513330 MsG0580024490.01.T01:CDS
ATCTGAGAAGTGACGGATGG+CGG 0.664337 5:+5516950 None:intergenic
CTGGAGAGAAGCGTGAGCAG+CGG 0.667719 5:+5516881 None:intergenic
GGCATCTGAGAAGTGACGGA+TGG 0.670607 5:+5516947 None:intergenic
TGATAGCAAGAGCTTTGACA+AGG 0.676277 5:-5514188 MsG0580024490.01.T01:CDS
CAGGAACATACCAAGAACCC+GGG 0.680404 5:-5513005 MsG0580024490.01.T01:CDS
TTTCCAAGTATACAGCAGCA+CGG 0.692729 5:+5516132 None:intergenic
CTGCATGTTACACAAAACTG+GGG 0.696032 5:-5513648 MsG0580024490.01.T01:CDS
TTGAGAAAGACCAAGATGAG+CGG 0.707072 5:+5516776 None:intergenic
TGCATGTTACACAAAACTGG+GGG 0.723034 5:-5513647 MsG0580024490.01.T01:CDS
ATATGCCGTCCAGTTCGGAG+AGG 0.733223 5:-5516391 MsG0580024490.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATGATATATGTAT+TGG - Chr5:5514294-5514313 MsG0580024490.01.T01:intron 10.0%
!! TTTGTCAAAAATATATAAAT+AGG + Chr5:5513626-5513645 None:intergenic 10.0%
!! AAGTCTAATAAAGAAAATAA+TGG + Chr5:5514729-5514748 None:intergenic 15.0%
!! CAAATACAAATTCAAATTAT+GGG + Chr5:5513220-5513239 None:intergenic 15.0%
!! TAATTTGAATTTGTATTTGA+AGG - Chr5:5513221-5513240 MsG0580024490.01.T01:intron 15.0%
!! TCAAATACAAATTCAAATTA+TGG + Chr5:5513221-5513240 None:intergenic 15.0%
!! TCATAAATATCTAATACTAT+TGG + Chr5:5515120-5515139 None:intergenic 15.0%
!! TTTAATTGGAAATAGTTAAA+AGG + Chr5:5513948-5513967 None:intergenic 15.0%
!! TAAATATCTAATACTATTGG+AGG + Chr5:5515117-5515136 None:intergenic 20.0%
!! TAATAATACTCTTTGAATTC+AGG - Chr5:5515967-5515986 MsG0580024490.01.T01:intron 20.0%
!! TAGATAAATTCTTCAACATT+TGG + Chr5:5514346-5514365 None:intergenic 20.0%
!! TGGATAAAAGAAGTAAAAAA+GGG - Chr5:5514548-5514567 MsG0580024490.01.T01:intron 20.0%
!! TTGGATAAAAGAAGTAAAAA+AGG - Chr5:5514547-5514566 MsG0580024490.01.T01:intron 20.0%
!! TTTCATGAAAGAATATGAAA+AGG - Chr5:5516180-5516199 MsG0580024490.01.T01:CDS 20.0%
!!! AACAAAGTAATGTATTTTCA+TGG + Chr5:5514046-5514065 None:intergenic 20.0%
!!! ACATTACTTTGTTTTTTATG+TGG - Chr5:5514053-5514072 MsG0580024490.01.T01:CDS 20.0%
!!! ATAGGATACAAATTTTACTA+TGG - Chr5:5515310-5515329 MsG0580024490.01.T01:intron 20.0%
!!! ATTAAACATACTTTTGTTTG+TGG - Chr5:5514184-5514203 MsG0580024490.01.T01:CDS 20.0%
!!! ATTATTACCTTAGGATTTTT+CGG + Chr5:5515954-5515973 None:intergenic 20.0%
!!! ATTTTGACTTGTTTTGTTTT+TGG - Chr5:5516894-5516913 MsG0580024490.01.T01:CDS 20.0%
!!! CATTACTTTGTTTTTTATGT+GGG - Chr5:5514054-5514073 MsG0580024490.01.T01:CDS 20.0%
!!! CTGTATTTTGAATATTTTTC+AGG - Chr5:5516503-5516522 MsG0580024490.01.T01:intron 20.0%
!!! GTTTTTTAATGTTAAGTCAA+GGG - Chr5:5515403-5515422 MsG0580024490.01.T01:intron 20.0%
!!! TTAAACATACTTTTGTTTGT+GGG - Chr5:5514185-5514204 MsG0580024490.01.T01:CDS 20.0%
! AAACAATAATGTGGAAATAG+AGG + Chr5:5515807-5515826 None:intergenic 25.0%
! AATATTATTGGGGTTGTTAA+AGG + Chr5:5515009-5515028 None:intergenic 25.0%
! ACTTGCTTAGTTATAGTATA+TGG - Chr5:5513776-5513795 MsG0580024490.01.T01:CDS 25.0%
! AGATTCAAGGAATATTGAAT+TGG + Chr5:5515429-5515448 None:intergenic 25.0%
! AGCAGTCTTGAAAATATTAT+TGG + Chr5:5515021-5515040 None:intergenic 25.0%
! ATAAATTCTTCAACATTTGG+AGG + Chr5:5514343-5514362 None:intergenic 25.0%
! ATAGGAAGAGAAAAATCTAA+GGG - Chr5:5515381-5515400 MsG0580024490.01.T01:intron 25.0%
! ATATTATTGGGGTTGTTAAA+GGG + Chr5:5515008-5515027 None:intergenic 25.0%
! ATTGAGTCAAAACAATAATG+TGG + Chr5:5515816-5515835 None:intergenic 25.0%
! CAGTCTTGAAAATATTATTG+GGG + Chr5:5515019-5515038 None:intergenic 25.0%
! CCTATAAACTCCTAATTAAA+GGG + Chr5:5514507-5514526 None:intergenic 25.0%
! GAAATATTAAACACATTGCA+GGG + Chr5:5516299-5516318 None:intergenic 25.0%
! GCAATAAGATGTGTTTATAA+TGG - Chr5:5516633-5516652 MsG0580024490.01.T01:CDS 25.0%
! GCAGTCTTGAAAATATTATT+GGG + Chr5:5515020-5515039 None:intergenic 25.0%
! TAAGATGTGTTTATAATGGT+TGG - Chr5:5516637-5516656 MsG0580024490.01.T01:CDS 25.0%
! TATGGTTTGAGTGTTTAAAT+AGG - Chr5:5515263-5515282 MsG0580024490.01.T01:intron 25.0%
! TCCTATAAACTCCTAATTAA+AGG + Chr5:5514508-5514527 None:intergenic 25.0%
! TCTTAGAAATTCTTTAATCG+TGG - Chr5:5514956-5514975 MsG0580024490.01.T01:intron 25.0%
! TTGAGTGTTTAAATAGGATT+AGG - Chr5:5515269-5515288 MsG0580024490.01.T01:intron 25.0%
! TTGCATAAAAGATTGTGATA+AGG - Chr5:5515463-5515482 MsG0580024490.01.T01:intron 25.0%
! TTTGAGTGTTTAAATAGGAT+TGG - Chr5:5515268-5515287 MsG0580024490.01.T01:intron 25.0%
!! AGTCTTGTAAATGAATGTTT+GGG - Chr5:5514246-5514265 MsG0580024490.01.T01:CDS 25.0%
!! GAACTTGTCAAATTTTACTA+TGG - Chr5:5515245-5515264 MsG0580024490.01.T01:intron 25.0%
!! GTTTTGCTTAATGTTAAGAT+TGG - Chr5:5513270-5513289 MsG0580024490.01.T01:intron 25.0%
!! TCAGAGTATTATGCATATAA+CGG + Chr5:5515071-5515090 None:intergenic 25.0%
!! TTATTACCTTAGGATTTTTC+GGG + Chr5:5515953-5515972 None:intergenic 25.0%
!! TTGATAGTACATCAATTCAA+TGG + Chr5:5513986-5514005 None:intergenic 25.0%
!!! AACTGTTTTTTTATGAAAGC+TGG - Chr5:5514140-5514159 MsG0580024490.01.T01:CDS 25.0%
!!! ATATTTCCAGTTTCCTTTTT+TGG - Chr5:5516312-5516331 MsG0580024490.01.T01:CDS 25.0%
!!! ATGTAACACTTTTTCAAGTA+TGG + Chr5:5513850-5513869 None:intergenic 25.0%
!!! GGTTTTTTAATGTTAAGTCA+AGG - Chr5:5515402-5515421 MsG0580024490.01.T01:intron 25.0%
!!! TCAAAGAGTATTATTACCTT+AGG + Chr5:5515963-5515982 None:intergenic 25.0%
!!! TGTAACACTTTTTCAAGTAT+GGG + Chr5:5513849-5513868 None:intergenic 25.0%
!!! TTTGAATATTTTTCAGGCTA+AGG - Chr5:5516509-5516528 MsG0580024490.01.T01:intron 25.0%
!!! TTTTTCTGGGAGAATATTAA+GGG + Chr5:5514794-5514813 None:intergenic 25.0%
AAATTAATAGAACCAGTCGT+GGG - Chr5:5516382-5516401 MsG0580024490.01.T01:CDS 30.0%
AATAATGAACCCTTGAAATC+AGG - Chr5:5513007-5513026 MsG0580024490.01.T01:CDS 30.0%
AATTCAATGGAATTCTCATG+GGG + Chr5:5513973-5513992 None:intergenic 30.0%
ACAACTGAAATGGATATACA+TGG + Chr5:5516355-5516374 None:intergenic 30.0%
ACTAAAACCCTAAAATATGC+GGG - Chr5:5514636-5514655 MsG0580024490.01.T01:intron 30.0%
AGAATACTTCGATCCAAATT+TGG - Chr5:5515700-5515719 MsG0580024490.01.T01:intron 30.0%
AGGAAATGAAAATGGTAGAA+AGG + Chr5:5514460-5514479 None:intergenic 30.0%
ATAAACACATCTTATTGCTG+TGG + Chr5:5516631-5516650 None:intergenic 30.0%
ATTCAGATAGCATAACCATA+AGG + Chr5:5515997-5516016 None:intergenic 30.0%
CAATTCAATGGAATTCTCAT+GGG + Chr5:5513974-5513993 None:intergenic 30.0%
CCCTTTAATTAGGAGTTTAT+AGG - Chr5:5514504-5514523 MsG0580024490.01.T01:intron 30.0%
CTTAATGTTAAGATTGGAAG+AGG - Chr5:5513276-5513295 MsG0580024490.01.T01:intron 30.0%
GAAAGAATATGAAAAGGCTT+TGG - Chr5:5516186-5516205 MsG0580024490.01.T01:CDS 30.0%
GAAGTAAATTTGATGGAAGA+TGG - Chr5:5516779-5516798 MsG0580024490.01.T01:intron 30.0%
GACTAAAACCCTAAAATATG+CGG - Chr5:5514635-5514654 MsG0580024490.01.T01:intron 30.0%
GATAGGAAGAGAAAAATCTA+AGG - Chr5:5515380-5515399 MsG0580024490.01.T01:intron 30.0%
GATGATGCAAGATATTCAAA+AGG - Chr5:5513192-5513211 MsG0580024490.01.T01:intron 30.0%
GATTTCAAGGGTTCATTATT+AGG + Chr5:5513007-5513026 None:intergenic 30.0%
GGAAATATTAAACACATTGC+AGG + Chr5:5516300-5516319 None:intergenic 30.0%
GGATCGAAATGAAAATCTTA+TGG + Chr5:5514773-5514792 None:intergenic 30.0%
GTATATGAACCAAATTGAGA+AGG - Chr5:5514006-5514025 MsG0580024490.01.T01:CDS 30.0%
GTATGTTTAATCACACACTT+AGG + Chr5:5514175-5514194 None:intergenic 30.0%
TAAAAGGGAGGAAATGAAAA+TGG + Chr5:5514468-5514487 None:intergenic 30.0%
TAATACTCTTTGAATTCAGG+TGG - Chr5:5515970-5515989 MsG0580024490.01.T01:intron 30.0%
TACCAAATCAAAGTCACAAT+AGG + Chr5:5516837-5516856 None:intergenic 30.0%
TACTATAAGCCTGAAAGAAA+TGG + Chr5:5516039-5516058 None:intergenic 30.0%
TAGTATCCAAAACATAACAG+CGG - Chr5:5515183-5515202 MsG0580024490.01.T01:intron 30.0%
TCAATTCAATGGAATTCTCA+TGG + Chr5:5513975-5513994 None:intergenic 30.0%
TCCAGATGAAGTAAATTTGA+TGG - Chr5:5516772-5516791 MsG0580024490.01.T01:intron 30.0%
TCCATCAAATTTACTTCATC+TGG + Chr5:5516776-5516795 None:intergenic 30.0%
TTCCTATTGTGACTTTGATT+TGG - Chr5:5516832-5516851 MsG0580024490.01.T01:CDS 30.0%
! ATTCTCATGGGGTTTTTAAT+TGG + Chr5:5513962-5513981 None:intergenic 30.0%
! GAGTCTTGTAAATGAATGTT+TGG - Chr5:5514245-5514264 MsG0580024490.01.T01:CDS 30.0%
! GATTTGGTATTGGAATAGAT+TGG - Chr5:5516848-5516867 MsG0580024490.01.T01:CDS 30.0%
! TTAAGTTCCCGCATATTTTA+GGG + Chr5:5514646-5514665 None:intergenic 30.0%
! TTAGTCTAGTTTCATTGCTA+AGG - Chr5:5513724-5513743 MsG0580024490.01.T01:intron 30.0%
! TTCGAAGGTACATATCATAT+TGG - Chr5:5516266-5516285 MsG0580024490.01.T01:CDS 30.0%
!! CTTTTTCTGGGAGAATATTA+AGG + Chr5:5514795-5514814 None:intergenic 30.0%
!! TTATTCGAAAGCTTTGGAAT+TGG - Chr5:5513530-5513549 MsG0580024490.01.T01:CDS 30.0%
!! TTGTGACTTTGATTTGGTAT+TGG - Chr5:5516838-5516857 MsG0580024490.01.T01:CDS 30.0%
!! TTGTTGTTCTAGTTCTTTCT+TGG + Chr5:5515681-5515700 None:intergenic 30.0%
!! TTTAAGTTCCCGCATATTTT+AGG + Chr5:5514647-5514666 None:intergenic 30.0%
!!! AGTTAAACACTTTTTCACCT+AGG + Chr5:5513893-5513912 None:intergenic 30.0%
!!! GTAACACTTTTTCAAGTATG+GGG + Chr5:5513848-5513867 None:intergenic 30.0%
!!! GTTAAACACTTTTTCACCTA+GGG + Chr5:5513892-5513911 None:intergenic 30.0%
AAGAAACCCGAAAAATCCTA+AGG - Chr5:5515944-5515963 MsG0580024490.01.T01:intron 35.0%
AATAGGATTGGAAGATTTCC+TGG - Chr5:5515280-5515299 MsG0580024490.01.T01:intron 35.0%
AATGTTAAGATTGGAAGAGG+TGG - Chr5:5513279-5513298 MsG0580024490.01.T01:intron 35.0%
AATTAATAGAACCAGTCGTG+GGG - Chr5:5516383-5516402 MsG0580024490.01.T01:CDS 35.0%
ACATGATAGCCTTCTCAATT+TGG + Chr5:5514018-5514037 None:intergenic 35.0%
AGATTTCCTGGTGTTTGAAT+AGG - Chr5:5515292-5515311 MsG0580024490.01.T01:intron 35.0%
AGCTTCATTGAGTTTCTTCA+GGG + Chr5:5515651-5515670 None:intergenic 35.0%
AGGAGTTTATAGGAGAATGA+AGG - Chr5:5514514-5514533 MsG0580024490.01.T01:intron 35.0%
ATAAACCAAAGTCAACCTTC+AGG + Chr5:5514920-5514939 None:intergenic 35.0%
ATAGGATTAGGAAGATTTCC+TGG - Chr5:5515346-5515365 MsG0580024490.01.T01:intron 35.0%
ATTCTTCAACATTTGGAGGA+CGG + Chr5:5514339-5514358 None:intergenic 35.0%
CAAATTAATAGAACCAGTCG+TGG - Chr5:5516381-5516400 MsG0580024490.01.T01:CDS 35.0%
CCTCATACTGAAAAGATTCA+AGG + Chr5:5515442-5515461 None:intergenic 35.0%
CTATCTGAATCCTAACAAGT+TGG - Chr5:5516007-5516026 MsG0580024490.01.T01:intron 35.0%
GAAGAAAAATATGCCATGCA+AGG + Chr5:5514611-5514630 None:intergenic 35.0%
GTGTAATGCTTAATAGCTTC+AGG + Chr5:5515912-5515931 None:intergenic 35.0%
GTTAAAGGGTCATTTAACTC+CGG + Chr5:5514994-5515013 None:intergenic 35.0%
TAATGCTGCGTATAAGAAGA+AGG - Chr5:5513485-5513504 MsG0580024490.01.T01:CDS 35.0%
TATGAAAACCTTGTCTTGCA+GGG - Chr5:5515859-5515878 MsG0580024490.01.T01:intron 35.0%
TCCTAATTAAAGGGTAGTGA+AGG + Chr5:5514498-5514517 None:intergenic 35.0%
TCTGCATTATTCGAAAGCTT+TGG - Chr5:5513524-5513543 MsG0580024490.01.T01:CDS 35.0%
TGAAGATAAACCCTAGTTGT+AGG + Chr5:5513154-5513173 None:intergenic 35.0%
TGATTTCCAGGAAAATCCAA+AGG - Chr5:5516680-5516699 MsG0580024490.01.T01:CDS 35.0%
TGCATCATCTTCACAAAATC+AGG + Chr5:5513181-5513200 None:intergenic 35.0%
TGGAATACTCCATTTCTTTC+AGG - Chr5:5516027-5516046 MsG0580024490.01.T01:intron 35.0%
TGTATACTTGGAAATGGGAA+AGG - Chr5:5513590-5513609 MsG0580024490.01.T01:CDS 35.0%
TTACTTCATCTGGACAATTC+CGG + Chr5:5516766-5516785 None:intergenic 35.0%
TTCAAGACTGCTGAGAATTT+GGG - Chr5:5515029-5515048 MsG0580024490.01.T01:intron 35.0%
TTGAGAAGGCTATCATGTAT+TGG - Chr5:5514020-5514039 MsG0580024490.01.T01:CDS 35.0%
TTGTATCCTATTCAAACACC+AGG + Chr5:5515301-5515320 None:intergenic 35.0%
TTTCAAGACTGCTGAGAATT+TGG - Chr5:5515028-5515047 MsG0580024490.01.T01:intron 35.0%
TTTGCTTCACACAACTGAAA+TGG + Chr5:5516365-5516384 None:intergenic 35.0%
! AAGCTTGTTTCAGTGTTTGA+TGG - Chr5:5515217-5515236 MsG0580024490.01.T01:intron 35.0%
! ACAAAACCGCTGTTATGTTT+TGG + Chr5:5515192-5515211 None:intergenic 35.0%
! AGAGAGTTATGCAAGCTTTT+GGG - Chr5:5513247-5513266 MsG0580024490.01.T01:intron 35.0%
! ATGGAGTATTCCAACTTGTT+AGG + Chr5:5516020-5516039 None:intergenic 35.0%
! CCTTGAATCTTTTCAGTATG+AGG - Chr5:5515439-5515458 MsG0580024490.01.T01:intron 35.0%
! GGATTGGAAGTACAATAGTT+GGG - Chr5:5516869-5516888 MsG0580024490.01.T01:CDS 35.0%
! GGTATTGGAATAGATTGGAT+TGG - Chr5:5516853-5516872 MsG0580024490.01.T01:CDS 35.0%
! TGGATTGGAAGTACAATAGT+TGG - Chr5:5516868-5516887 MsG0580024490.01.T01:CDS 35.0%
! TTAAAGCGTCAGTGTAATTC+TGG + Chr5:5512854-5512873 None:intergenic 35.0%
! TTTTGGTAAGTCTCAATGAC+AGG + Chr5:5515599-5515618 None:intergenic 35.0%
!! AGTGAAGGCTTTGGATAAAA+GGG + Chr5:5514483-5514502 None:intergenic 35.0%
!! TAGTGAAGGCTTTGGATAAA+AGG + Chr5:5514484-5514503 None:intergenic 35.0%
!! TGATTTTCCAGCAGAGTATT+TGG - Chr5:5515088-5515107 MsG0580024490.01.T01:intron 35.0%
!! TTTGATTTGTTCCTGACACT+TGG - Chr5:5514085-5514104 MsG0580024490.01.T01:CDS 35.0%
!!! GAATGAAGGAGAGTGTTTTT+TGG - Chr5:5514528-5514547 MsG0580024490.01.T01:intron 35.0%
!!! GACAGGTTTGCTTTTTTTCT+TGG - Chr5:5516580-5516599 MsG0580024490.01.T01:CDS 35.0%
AAAATATGCCATGCAAGGTG+AGG + Chr5:5514606-5514625 None:intergenic 40.0%
AACAACCAGGAATTGCTTGA+AGG - Chr5:5516241-5516260 MsG0580024490.01.T01:CDS 40.0%
AAGCAAACCTGTCTCATAAC+AGG + Chr5:5516573-5516592 None:intergenic 40.0%
ACAACCAGGAATTGCTTGAA+GGG - Chr5:5516242-5516261 MsG0580024490.01.T01:CDS 40.0%
ACCTAGGGAAAAAGTTGAAC+AGG + Chr5:5513877-5513896 None:intergenic 40.0%
ACTGTGCTATCTCTATGCAA+AGG - Chr5:5513803-5513822 MsG0580024490.01.T01:CDS 40.0%
AGCAAACCTGTCTCATAACA+GGG + Chr5:5516572-5516591 None:intergenic 40.0%
AGCTCTTGCGAAAAAGCAAT+TGG - Chr5:5516803-5516822 MsG0580024490.01.T01:CDS 40.0%
AGCTGCATGTTACACAAAAC+TGG - Chr5:5516063-5516082 MsG0580024490.01.T01:intron 40.0%
ATAATGTGGAAATAGAGGCC+AGG + Chr5:5515802-5515821 None:intergenic 40.0%
ATCGGCTAAACCTGATTTCA+AGG + Chr5:5513020-5513039 None:intergenic 40.0%
ATCGTGGAATCTAATCACAC+CGG - Chr5:5514972-5514991 MsG0580024490.01.T01:intron 40.0%
ATCTCTTAGTCTGATCTTCC+AGG - Chr5:5515749-5515768 MsG0580024490.01.T01:intron 40.0%
ATGAGAGAACTCGGACAATT+TGG + Chr5:5514377-5514396 None:intergenic 40.0%
CAGCTTCATTGAGTTTCTTC+AGG + Chr5:5515652-5515671 None:intergenic 40.0%
CGGGAACTTAAAAATGCACT+GGG - Chr5:5514655-5514674 MsG0580024490.01.T01:intron 40.0%
CTGCATGTTACACAAAACTG+GGG - Chr5:5516065-5516084 MsG0580024490.01.T01:intron 40.0%
CTGTGCTATCTCTATGCAAA+GGG - Chr5:5513804-5513823 MsG0580024490.01.T01:CDS 40.0%
GAAACATGATGCAAACAACC+AGG - Chr5:5516228-5516247 MsG0580024490.01.T01:CDS 40.0%
GAAACTCAATGAAGCTGAGA+AGG - Chr5:5515655-5515674 MsG0580024490.01.T01:intron 40.0%
GCCTTCACTACCCTTTAATT+AGG - Chr5:5514494-5514513 MsG0580024490.01.T01:intron 40.0%
GCTGCATGTTACACAAAACT+GGG - Chr5:5516064-5516083 MsG0580024490.01.T01:intron 40.0%
GCTGCTGTATACTTGGAAAT+GGG - Chr5:5513585-5513604 MsG0580024490.01.T01:CDS 40.0%
GGATACTAAGTGCAATAAGC+AGG + Chr5:5515171-5515190 None:intergenic 40.0%
GTATGAAAACCTTGTCTTGC+AGG - Chr5:5515858-5515877 MsG0580024490.01.T01:intron 40.0%
TACTGCTGATCCTACAACTA+GGG - Chr5:5513141-5513160 MsG0580024490.01.T01:intron 40.0%
TATTCATTCCCTGCAAGACA+AGG + Chr5:5515870-5515889 None:intergenic 40.0%
TCCTATCCTATTCAAACACC+AGG + Chr5:5515367-5515386 None:intergenic 40.0%
TCCTGGTGTTTGAATAGGAT+AGG - Chr5:5515297-5515316 MsG0580024490.01.T01:intron 40.0%
TCGGCTAAACCTGATTTCAA+GGG + Chr5:5513019-5513038 None:intergenic 40.0%
TCTGCATCCTTTAAACCTTC+AGG + Chr5:5516097-5516116 None:intergenic 40.0%
TGCATGTTACACAAAACTGG+GGG - Chr5:5516066-5516085 MsG0580024490.01.T01:intron 40.0%
TGCTGCTGTATACTTGGAAA+TGG - Chr5:5513584-5513603 MsG0580024490.01.T01:CDS 40.0%
TGTAACTCCTGAAGAGTTGA+AGG - Chr5:5516407-5516426 MsG0580024490.01.T01:CDS 40.0%
TGTGATAAGGCTGTTGAAAG+AGG - Chr5:5515476-5515495 MsG0580024490.01.T01:intron 40.0%
TTAAAGGGTAGTGAAGGCTT+TGG + Chr5:5514492-5514511 None:intergenic 40.0%
TTACTGCTGATCCTACAACT+AGG - Chr5:5513140-5513159 MsG0580024490.01.T01:intron 40.0%
TTGAATTCAGGTGGTCCTTA+TGG - Chr5:5515979-5515998 MsG0580024490.01.T01:intron 40.0%
TTGAGAAAGACCAAGATGAG+CGG + Chr5:5512940-5512959 None:intergenic 40.0%
TTGCAGCCAAAAAAGGAAAC+TGG + Chr5:5516321-5516340 None:intergenic 40.0%
TTTCCAAGTATACAGCAGCA+CGG + Chr5:5513584-5513603 None:intergenic 40.0%
! ACATGACTTGCAGCCAAAAA+AGG + Chr5:5516328-5516347 None:intergenic 40.0%
! ACTCAAACCTGATTGGTCAA+AGG - Chr5:5512896-5512915 MsG0580024490.01.T01:three_prime_UTR 40.0%
! ATTAACTGCCCATTCGAGTT+AGG - Chr5:5514426-5514445 MsG0580024490.01.T01:intron 40.0%
! CAGAGAGTTATGCAAGCTTT+TGG - Chr5:5513246-5513265 MsG0580024490.01.T01:intron 40.0%
! CTCAAACCTGATTGGTCAAA+GGG - Chr5:5512897-5512916 MsG0580024490.01.T01:three_prime_UTR 40.0%
! CTTTGGAAACATACCAGGAA+GGG - Chr5:5516203-5516222 MsG0580024490.01.T01:CDS 40.0%
! GAGAGTTATGCAAGCTTTTG+GGG - Chr5:5513248-5513267 MsG0580024490.01.T01:intron 40.0%
! GCTGTTTCAGCTTACAAGAA+AGG - Chr5:5512969-5512988 MsG0580024490.01.T01:CDS 40.0%
! TGAAGGATGTTCTGAATCTC+TGG + Chr5:5516546-5516565 None:intergenic 40.0%
! TGATAGCAAGAGCTTTGACA+AGG - Chr5:5515525-5515544 MsG0580024490.01.T01:intron 40.0%
! TTAACTGCCCATTCGAGTTA+GGG - Chr5:5514427-5514446 MsG0580024490.01.T01:intron 40.0%
! TTCGACGGTTTTCTTTGCAT+CGG + Chr5:5512877-5512896 None:intergenic 40.0%
! TTGTCCGAGTTCTCTCATTT+TGG - Chr5:5514379-5514398 MsG0580024490.01.T01:intron 40.0%
!! AAAAGCATCACCAAACGGAT+TGG + Chr5:5513095-5513114 None:intergenic 40.0%
!! AAAGGCTTTGGAAACATACC+AGG - Chr5:5516198-5516217 MsG0580024490.01.T01:CDS 40.0%
!! AGCTTTGGAATTGGATGATG+AGG - Chr5:5513539-5513558 MsG0580024490.01.T01:CDS 40.0%
!! CCAGAAAAAGCATCACCAAA+CGG + Chr5:5513100-5513119 None:intergenic 40.0%
!! GTAGCCTTAAGGCTTTGAAT+GGG + Chr5:5514891-5514910 None:intergenic 40.0%
!! TAATGGTTGGCTTTGTATGC+AGG - Chr5:5516650-5516669 MsG0580024490.01.T01:CDS 40.0%
!! TCTCTCATTTTGGAGGGATT+TGG - Chr5:5514389-5514408 MsG0580024490.01.T01:intron 40.0%
!! TTGGCTTTGTATGCAGGTAT+TGG - Chr5:5516656-5516675 MsG0580024490.01.T01:CDS 40.0%
!!! AGGAGCATCTTCACTTTTTC+TGG + Chr5:5514808-5514827 None:intergenic 40.0%
!!! GACTTTGAAGGGTGTTTTAG+AGG - Chr5:5514682-5514701 MsG0580024490.01.T01:intron 40.0%
!!! GGAGCATCTTCACTTTTTCT+GGG + Chr5:5514807-5514826 None:intergenic 40.0%
AAAGTCAACCTTCAGGACCA+AGG + Chr5:5514913-5514932 None:intergenic 45.0%
AACTCGGACAATTTGGAGGA+GGG + Chr5:5514370-5514389 None:intergenic 45.0%
AATACAGGACGTGATTGGTG+GGG + Chr5:5512803-5512822 None:intergenic 45.0%
AATTGCTTGAAGGGGTTCGA+AGG - Chr5:5516251-5516270 MsG0580024490.01.T01:CDS 45.0%
ACAAGGAAAGGAACTGCCAT+GGG - Chr5:5515542-5515561 MsG0580024490.01.T01:intron 45.0%
ACAGGAACATACCAAGAACC+CGG - Chr5:5516707-5516726 MsG0580024490.01.T01:intron 45.0%
AGAGAACTCGGACAATTTGG+AGG + Chr5:5514374-5514393 None:intergenic 45.0%
AGGAACTGCCATGGGTAAAA+CGG - Chr5:5515550-5515569 MsG0580024490.01.T01:intron 45.0%
ATAGTCCCCCTAACTCGAAT+GGG + Chr5:5514437-5514456 None:intergenic 45.0%
ATCCAAAAGCTGATCAGTGC+CGG - Chr5:5516744-5516763 MsG0580024490.01.T01:intron 45.0%
ATTGGTGGGGGAAAGATTGA+TGG + Chr5:5512790-5512809 None:intergenic 45.0%
CAACCAGGAATTGCTTGAAG+GGG - Chr5:5516243-5516262 MsG0580024490.01.T01:CDS 45.0%
CACTGGGAGAAGACTTTGAA+GGG - Chr5:5514671-5514690 MsG0580024490.01.T01:intron 45.0%
CATCATGTTTCAACCCTTCC+TGG + Chr5:5516219-5516238 None:intergenic 45.0%
CCCTCCAAAATGAGAGAACT+CGG + Chr5:5514386-5514405 None:intergenic 45.0%
CGATCCAAATTTGGCTGATG+AGG - Chr5:5515709-5515728 MsG0580024490.01.T01:intron 45.0%
CTCTCCTCATCAGCCAAATT+TGG + Chr5:5515716-5515735 None:intergenic 45.0%
CTGTAACCCTTTGACCAATC+AGG + Chr5:5512906-5512925 None:intergenic 45.0%
GAATACAGGACGTGATTGGT+GGG + Chr5:5512804-5512823 None:intergenic 45.0%
GCGGGAACTTAAAAATGCAC+TGG - Chr5:5514654-5514673 MsG0580024490.01.T01:intron 45.0%
GCTGATGAGGAGAGAGAAAA+AGG - Chr5:5515722-5515741 MsG0580024490.01.T01:intron 45.0%
GGCAATGCCTGAAGGTTTAA+AGG - Chr5:5516087-5516106 MsG0580024490.01.T01:intron 45.0%
GTATAACCCTTGGTGAAGGT+CGG + Chr5:5516139-5516158 None:intergenic 45.0%
GTCGTGTGCATGCTTTCAAT+TGG - Chr5:5516976-5516995 MsG0580024490.01.T01:CDS 45.0%
GTCTCATAACAGGGTCTTGA+AGG + Chr5:5516563-5516582 None:intergenic 45.0%
GTCTCCCATTCAAAGCCTTA+AGG - Chr5:5514884-5514903 MsG0580024490.01.T01:intron 45.0%
GTTGGAATACAGGACGTGAT+TGG + Chr5:5512808-5512827 None:intergenic 45.0%
TATAACCCTTGGTGAAGGTC+GGG + Chr5:5516138-5516157 None:intergenic 45.0%
TATCACCACTTCCAAGTGTC+AGG + Chr5:5514099-5514118 None:intergenic 45.0%
TCAAAGCCTTAAGGCTACCT+TGG - Chr5:5514893-5514912 MsG0580024490.01.T01:intron 45.0%
TCAAGACCCTGTTATGAGAC+AGG - Chr5:5516563-5516582 MsG0580024490.01.T01:intron 45.0%
TGAAGAGTTGAAGGAGAGAC+AGG - Chr5:5516416-5516435 MsG0580024490.01.T01:CDS 45.0%
TGATGGCATCTGAGAAGTGA+CGG + Chr5:5512773-5512792 None:intergenic 45.0%
TGTCTCTCCTTCAACTCTTC+AGG + Chr5:5516417-5516436 None:intergenic 45.0%
TTGTTCCTGACACTTGGAAG+TGG - Chr5:5514091-5514110 MsG0580024490.01.T01:CDS 45.0%
! CCAATCAGGTTTGAGTTCGA+CGG + Chr5:5512892-5512911 None:intergenic 45.0%
! CCGAGTTCTCTCATTTTGGA+GGG - Chr5:5514383-5514402 MsG0580024490.01.T01:intron 45.0%
! GCAAGAGCTTTGACAAGGAA+AGG - Chr5:5515530-5515549 MsG0580024490.01.T01:intron 45.0%
! TAACCGTGCTGCTGTATACT+TGG - Chr5:5513578-5513597 MsG0580024490.01.T01:CDS 45.0%
! TAACTGCCCATTCGAGTTAG+GGG - Chr5:5514428-5514447 MsG0580024490.01.T01:intron 45.0%
! TCCGAGTTCTCTCATTTTGG+AGG - Chr5:5514382-5514401 MsG0580024490.01.T01:intron 45.0%
! TGAGTTTCTTCAGGGTGTCT+GGG + Chr5:5515643-5515662 None:intergenic 45.0%
! TTGAGTTTCTTCAGGGTGTC+TGG + Chr5:5515644-5515663 None:intergenic 45.0%
! TTGGTCCTGAAGGTTGACTT+TGG - Chr5:5514912-5514931 MsG0580024490.01.T01:intron 45.0%
! TTTTTCTGGACCGGAGATGT+GGG - Chr5:5513111-5513130 MsG0580024490.01.T01:intron 45.0%
!! GAAGGCTTTGGATAAAAGGG+AGG + Chr5:5514480-5514499 None:intergenic 45.0%
!! GCAGGTATTGGTTGATTTCC+AGG - Chr5:5516668-5516687 MsG0580024490.01.T01:CDS 45.0%
!! GCCTGTTCAACTTTTTCCCT+AGG - Chr5:5513873-5513892 MsG0580024490.01.T01:intron 45.0%
!! GCTTTGGAAACATACCAGGA+AGG - Chr5:5516202-5516221 MsG0580024490.01.T01:CDS 45.0%
!! GGTAGCCTTAAGGCTTTGAA+TGG + Chr5:5514892-5514911 None:intergenic 45.0%
!!! CCGTTTGGTGATGCTTTTTC+TGG - Chr5:5513097-5513116 MsG0580024490.01.T01:intron 45.0%
!!! GCATTTTGCCGTTTTACCCA+TGG + Chr5:5515561-5515580 None:intergenic 45.0%
!!! TGGTGATGCTTTTTCTGGAC+CGG - Chr5:5513102-5513121 MsG0580024490.01.T01:intron 45.0%
AAAACTGAACCGCACCCTTC+CGG + Chr5:5516162-5516181 None:intergenic 50.0%
ACCAAGGGTTATACCCGGAA+GGG - Chr5:5516145-5516164 MsG0580024490.01.T01:CDS 50.0%
AGACTAGAGAGAGAGAGGGA+GGG + Chr5:5514868-5514887 None:intergenic 50.0%
AGGAGAAGGAAGTGAAGCAG+AGG - Chr5:5513430-5513449 MsG0580024490.01.T01:intron 50.0%
ATACAGCAGCACGGTTAGTG+AGG + Chr5:5513575-5513594 None:intergenic 50.0%
ATACAGGACGTGATTGGTGG+GGG + Chr5:5512802-5512821 None:intergenic 50.0%
ATGGGAGACTAGAGAGAGAG+AGG + Chr5:5514873-5514892 None:intergenic 50.0%
CAGGAACATACCAAGAACCC+GGG - Chr5:5516708-5516727 MsG0580024490.01.T01:intron 50.0%
CCGTCGAACTCAAACCTGAT+TGG - Chr5:5512889-5512908 MsG0580024490.01.T01:three_prime_UTR 50.0%
CCTTCACCAAGGGTTATACC+CGG - Chr5:5516140-5516159 MsG0580024490.01.T01:CDS 50.0%
CTTGCAGGAAATGAAGAGCC+TGG + Chr5:5515770-5515789 None:intergenic 50.0%
GAACCCCTTCAAGCAATTCC+TGG + Chr5:5516249-5516268 None:intergenic 50.0%
GAACTCGGACAATTTGGAGG+AGG + Chr5:5514371-5514390 None:intergenic 50.0%
GAAGGAAGTGAAGCAGAGGA+AGG - Chr5:5513434-5513453 MsG0580024490.01.T01:intron 50.0%
GACAAGGAAAGGAACTGCCA+TGG - Chr5:5515541-5515560 MsG0580024490.01.T01:intron 50.0%
GAGGATGCCAAATACTCTGC+TGG + Chr5:5515098-5515117 None:intergenic 50.0%
GATAGTCCCCCTAACTCGAA+TGG + Chr5:5514438-5514457 None:intergenic 50.0%
GCACTGGGAGAAGACTTTGA+AGG - Chr5:5514670-5514689 MsG0580024490.01.T01:intron 50.0%
GGAAAATCCAAAGGCTGCAC+AGG - Chr5:5516689-5516708 MsG0580024490.01.T01:intron 50.0%
GGAATACAGGACGTGATTGG+TGG + Chr5:5512805-5512824 None:intergenic 50.0%
GTAAGTTTCGCCCACATCTC+CGG + Chr5:5513124-5513143 None:intergenic 50.0%
GTATGTTCCTGTGCAGCCTT+TGG + Chr5:5516699-5516718 None:intergenic 50.0%
TAAGGCTACCTTGGTCCTGA+AGG - Chr5:5514902-5514921 MsG0580024490.01.T01:intron 50.0%
TCAAAGGGTTACAGCCGTCT+CGG - Chr5:5512912-5512931 MsG0580024490.01.T01:three_prime_UTR 50.0%
TGGAAATAGAGGCCAGGAGA+AGG + Chr5:5515796-5515815 None:intergenic 50.0%
TGGATCTTGTCCATCACACC+CGG + Chr5:5516729-5516748 None:intergenic 50.0%
TGGGAGACTAGAGAGAGAGA+GGG + Chr5:5514872-5514891 None:intergenic 50.0%
! AACTGCCCATTCGAGTTAGG+GGG - Chr5:5514429-5514448 MsG0580024490.01.T01:intron 50.0%
! ACTAGTCTCCTCACCTTGCA+TGG - Chr5:5514595-5514614 MsG0580024490.01.T01:intron 50.0%
! CTTTTTCTGGACCGGAGATG+TGG - Chr5:5513110-5513129 MsG0580024490.01.T01:intron 50.0%
! GGTGCTCTGTAAGCGCTTTT+TGG + Chr5:5515616-5515635 None:intergenic 50.0%
! GTGCAGCCTTTGGATTTTCC+TGG + Chr5:5516689-5516708 None:intergenic 50.0%
! TCAGGACCAAGGTAGCCTTA+AGG + Chr5:5514902-5514921 None:intergenic 50.0%
! TCTTCAGGGTGTCTGGGTTA+CGG + Chr5:5515637-5515656 None:intergenic 50.0%
! TGGAAGAGGTGGTGATGATG+TGG - Chr5:5513290-5513309 MsG0580024490.01.T01:intron 50.0%
!! ATCTGAGAAGTGACGGATGG+CGG + Chr5:5512766-5512785 None:intergenic 50.0%
!! GCCTTTGGCTTTAGCTTCGT+CGG + Chr5:5512712-5512731 None:intergenic 50.0%
!!! TTCCGGCACTGATCAGCTTT+TGG + Chr5:5516749-5516768 None:intergenic 50.0%
AAACTGAACCGCACCCTTCC+GGG + Chr5:5516161-5516180 None:intergenic 55.0%
AAACTGGGGGCAATGCCTGA+AGG - Chr5:5516079-5516098 MsG0580024490.01.T01:intron 55.0%
AATGGAGGAGGTGGCTGATG+AGG - Chr5:5513410-5513429 MsG0580024490.01.T01:intron 55.0%
ACCCTTCCGGGTATAACCCT+TGG + Chr5:5516149-5516168 None:intergenic 55.0%
AGCAGCACGGTTAGTGAGGA+AGG + Chr5:5513571-5513590 None:intergenic 55.0%
AGCCGATGCTCAAAAAGCCG+CGG - Chr5:5513033-5513052 MsG0580024490.01.T01:CDS 55.0%
AGCTCTCTTCCTCTCCGAAC+TGG + Chr5:5513334-5513353 None:intergenic 55.0%
AGGAGTTACATCCCCACGAC+TGG + Chr5:5516397-5516416 None:intergenic 55.0%
AGTGAAGCAGAGGAAGGCTG+AGG - Chr5:5513440-5513459 MsG0580024490.01.T01:intron 55.0%
ATATGCCGTCCAGTTCGGAG+AGG - Chr5:5513322-5513341 MsG0580024490.01.T01:CDS 55.0%
CACCAAGGGTTATACCCGGA+AGG - Chr5:5516144-5516163 MsG0580024490.01.T01:CDS 55.0%
CAGCGGATCGGTTGGAATAC+AGG + Chr5:5512818-5512837 None:intergenic 55.0%
CCGGGTATAACCCTTGGTGA+AGG + Chr5:5516143-5516162 None:intergenic 55.0%
CTCTTCCTCTCCGAACTGGA+CGG + Chr5:5513330-5513349 None:intergenic 55.0%
CTTGACCCGACCTTCACCAA+GGG - Chr5:5516130-5516149 MsG0580024490.01.T01:CDS 55.0%
GAAGAGAGCTGCTGAACCTG+AGG - Chr5:5513344-5513363 MsG0580024490.01.T01:CDS 55.0%
GACTAGAGAGAGAGAGGGAG+GGG + Chr5:5514867-5514886 None:intergenic 55.0%
GAGACTAGAGAGAGAGAGGG+AGG + Chr5:5514869-5514888 None:intergenic 55.0%
GCCGACGAAGCTAAAGCCAA+AGG - Chr5:5512708-5512727 MsG0580024490.01.T01:three_prime_UTR 55.0%
GCCTGATATGCCGTCCAGTT+CGG - Chr5:5513317-5513336 MsG0580024490.01.T01:CDS 55.0%
GGAGAATGCAGCGTTGCCTT+TGG + Chr5:5512727-5512746 None:intergenic 55.0%
GGATCTTGTCCATCACACCC+GGG + Chr5:5516728-5516747 None:intergenic 55.0%
TACCAAGAACCCGGGTGTGA+TGG - Chr5:5516716-5516735 MsG0580024490.01.T01:intron 55.0%
TCATCAGCCACCTCCTCCAT+TGG + Chr5:5513411-5513430 None:intergenic 55.0%
TCCGAACTGGACGGCATATC+AGG + Chr5:5513321-5513340 None:intergenic 55.0%
TCCTGCAAGCATCCTTCTCC+TGG - Chr5:5515781-5515800 MsG0580024490.01.T01:intron 55.0%
TGAACCTGAGGTGGCAAAGC+AGG - Chr5:5513356-5513375 MsG0580024490.01.T01:intron 55.0%
! GGCATCTGAGAAGTGACGGA+TGG + Chr5:5512769-5512788 None:intergenic 55.0%
!! TCACCAAACGGATTGGCACC+CGG + Chr5:5513088-5513107 None:intergenic 55.0%
ACCTGAGGTGGCAAAGCAGG+CGG - Chr5:5513359-5513378 MsG0580024490.01.T01:intron 60.0%
AGAGAGAGAGAGGGAGGGGA+CGG + Chr5:5514863-5514882 None:intergenic 60.0%
CCTAGAAAAACTCGCCGCCG+CGG + Chr5:5513053-5513072 None:intergenic 60.0%
CGATGCTCAAAAAGCCGCGG+CGG - Chr5:5513036-5513055 MsG0580024490.01.T01:CDS 60.0%
GAGAGCTGCTGAACCTGAGG+TGG - Chr5:5513347-5513366 MsG0580024490.01.T01:intron 60.0%
GCCAGGAGAAGGATGCTTGC+AGG + Chr5:5515785-5515804 None:intergenic 60.0%
GCTTGACCCGACCTTCACCA+AGG - Chr5:5516129-5516148 MsG0580024490.01.T01:CDS 60.0%
GGAGGTGGCTGATGAGGAGA+AGG - Chr5:5513416-5513435 MsG0580024490.01.T01:intron 60.0%
GGCAACGCTGCATTCTCCTC+CGG - Chr5:5512729-5512748 MsG0580024490.01.T01:three_prime_UTR 60.0%
GGGCGAAGGGGGTAGAGAAT+AGG + Chr5:5514828-5514847 None:intergenic 60.0%
GGGTTATACCCGGAAGGGTG+CGG - Chr5:5516150-5516169 MsG0580024490.01.T01:CDS 60.0%
GTCCATCACACCCGGGTTCT+TGG + Chr5:5516721-5516740 None:intergenic 60.0%
TGAGGCGCAGAAGGAGAAGG+AGG - Chr5:5513458-5513477 MsG0580024490.01.T01:intron 60.0%
TTCTAGGCCACGTTCTGCGC+CGG - Chr5:5513066-5513085 MsG0580024490.01.T01:intron 60.0%
! CAAGATGAGCGGCACCGAGA+CGG + Chr5:5512929-5512948 None:intergenic 60.0%
! CTGGAGAGAAGCGTGAGCAG+CGG + Chr5:5512835-5512854 None:intergenic 60.0%
! GAGAAGCGTGAGCAGCGGAT+CGG + Chr5:5512830-5512849 None:intergenic 60.0%
! GATGGCGGTTGCGAAATCGC+CGG + Chr5:5512751-5512770 None:intergenic 60.0%
!! CGCCGCGGCTTTTTGAGCAT+CGG + Chr5:5513038-5513057 None:intergenic 60.0%
!! TCCTCCATTGGCTCCGGTTC+CGG + Chr5:5513399-5513418 None:intergenic 60.0%
ACCGGAGCCAATGGAGGAGG+TGG - Chr5:5513401-5513420 MsG0580024490.01.T01:intron 65.0%
AGCGTGAGCAGCGGATCGGT+TGG + Chr5:5512826-5512845 None:intergenic 65.0%
AGGGGACGGCGAAGGGCTTT+GGG + Chr5:5514849-5514868 None:intergenic 65.0%
GAGGAAGGCTGAGGCGCAGA+AGG - Chr5:5513449-5513468 MsG0580024490.01.T01:intron 65.0%
GCGCAGAAGGAGAAGGAGGC+TGG - Chr5:5513462-5513481 MsG0580024490.01.T01:intron 65.0%
GGAACCGGAGCCAATGGAGG+AGG - Chr5:5513398-5513417 MsG0580024490.01.T01:intron 65.0%
GGCTGAGGCGCAGAAGGAGA+AGG - Chr5:5513455-5513474 MsG0580024490.01.T01:intron 65.0%
GGTTGAGCCTGAGCCGGAAC+CGG - Chr5:5513383-5513402 MsG0580024490.01.T01:intron 65.0%
TCCGCCTGCTTTGCCACCTC+AGG + Chr5:5513363-5513382 None:intergenic 65.0%
TCTAGGCCACGTTCTGCGCC+GGG - Chr5:5513067-5513086 MsG0580024490.01.T01:intron 65.0%
TGAGCCGGAACCGGAGCCAA+TGG - Chr5:5513392-5513411 MsG0580024490.01.T01:intron 65.0%
TGAGGTGGCAAAGCAGGCGG+AGG - Chr5:5513362-5513381 MsG0580024490.01.T01:intron 65.0%
! ATTGGCTCCGGTTCCGGCTC+AGG + Chr5:5513393-5513412 None:intergenic 65.0%
! CCGCGGCGGCGAGTTTTTCT+AGG - Chr5:5513050-5513069 MsG0580024490.01.T01:intron 65.0%
!! CGAAGGGCTTTGGGGCGAAG+GGG + Chr5:5514840-5514859 None:intergenic 65.0%
!! CGTCTCGGTGCCGCTCATCT+TGG - Chr5:5512927-5512946 MsG0580024490.01.T01:three_prime_UTR 65.0%
!! GAAGGGCTTTGGGGCGAAGG+GGG + Chr5:5514839-5514858 None:intergenic 65.0%
!! GCCACCTCCTCCATTGGCTC+CGG + Chr5:5513405-5513424 None:intergenic 65.0%
!! GCGAAGGGCTTTGGGGCGAA+GGG + Chr5:5514841-5514860 None:intergenic 65.0%
AGAGAGGGAGGGGACGGCGA+AGG + Chr5:5514857-5514876 None:intergenic 70.0%
GAGAGGGAGGGGACGGCGAA+GGG + Chr5:5514856-5514875 None:intergenic 70.0%
GAGGGGACGGCGAAGGGCTT+TGG + Chr5:5514850-5514869 None:intergenic 70.0%
GCCGGAACCGGAGCCAATGG+AGG - Chr5:5513395-5513414 MsG0580024490.01.T01:intron 70.0%
GCGCCGGGTGCCAATCCGTT+TGG - Chr5:5513082-5513101 MsG0580024490.01.T01:intron 70.0%
GGCGGAGGTTGAGCCTGAGC+CGG - Chr5:5513377-5513396 MsG0580024490.01.T01:intron 70.0%
GGCGGTTGCGAAATCGCCGG+AGG + Chr5:5512748-5512767 None:intergenic 70.0%
GGGGACGGCGAAGGGCTTTG+GGG + Chr5:5514848-5514867 None:intergenic 70.0%
TTGGCACCCGGCGCAGAACG+TGG + Chr5:5513076-5513095 None:intergenic 70.0%
!! GGCGAAGGGCTTTGGGGCGA+AGG + Chr5:5514842-5514861 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 5512705 5517030 5512705 ID=MsG0580024490.01;Name=MsG0580024490.01
Chr5 mRNA 5512705 5517030 5512705 ID=MsG0580024490.01.T01;Parent=MsG0580024490.01;Name=MsG0580024490.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0.75|0.66|1|1|1|9|245|526
Chr5 exon 5512705 5513063 5512705 ID=MsG0580024490.01.T01:exon:19108;Parent=MsG0580024490.01.T01
Chr5 exon 5513151 5513210 5513151 ID=MsG0580024490.01.T01:exon:19107;Parent=MsG0580024490.01.T01
Chr5 exon 5513298 5513364 5513298 ID=MsG0580024490.01.T01:exon:19106;Parent=MsG0580024490.01.T01
Chr5 exon 5513463 5513686 5513463 ID=MsG0580024490.01.T01:exon:19105;Parent=MsG0580024490.01.T01
Chr5 exon 5513770 5513855 5513770 ID=MsG0580024490.01.T01:exon:19104;Parent=MsG0580024490.01.T01
Chr5 exon 5513992 5514280 5513992 ID=MsG0580024490.01.T01:exon:19103;Parent=MsG0580024490.01.T01
Chr5 exon 5516124 5516486 5516124 ID=MsG0580024490.01.T01:exon:19102;Parent=MsG0580024490.01.T01
Chr5 exon 5516573 5516706 5516573 ID=MsG0580024490.01.T01:exon:19101;Parent=MsG0580024490.01.T01
Chr5 exon 5516787 5517030 5516787 ID=MsG0580024490.01.T01:exon:19100;Parent=MsG0580024490.01.T01
Chr5 CDS 5516787 5517030 5516787 ID=MsG0580024490.01.T01:cds;Parent=MsG0580024490.01.T01
Chr5 CDS 5516573 5516706 5516573 ID=MsG0580024490.01.T01:cds;Parent=MsG0580024490.01.T01
Chr5 CDS 5516124 5516486 5516124 ID=MsG0580024490.01.T01:cds;Parent=MsG0580024490.01.T01
Chr5 CDS 5513992 5514280 5513992 ID=MsG0580024490.01.T01:cds;Parent=MsG0580024490.01.T01
Chr5 CDS 5513770 5513855 5513770 ID=MsG0580024490.01.T01:cds;Parent=MsG0580024490.01.T01
Chr5 CDS 5513463 5513686 5513463 ID=MsG0580024490.01.T01:cds;Parent=MsG0580024490.01.T01
Chr5 CDS 5513298 5513364 5513298 ID=MsG0580024490.01.T01:cds;Parent=MsG0580024490.01.T01
Chr5 CDS 5513151 5513210 5513151 ID=MsG0580024490.01.T01:cds;Parent=MsG0580024490.01.T01
Chr5 CDS 5512950 5513063 5512950 ID=MsG0580024490.01.T01:cds;Parent=MsG0580024490.01.T01
Chr5 three_prime_UTR 5512705 5512949 5512705 ID=MsG0580024490.01.T01:three_prime_utr;Parent=MsG0580024490.01.T01
Gene Sequence

>MsG0580024490.01.T01

ATGGCCGACGAAGCTAAAGCCAAAGGCAACGCTGCATTCTCCTCCGGCGATTTCGCAACCGCCATCCGTCACTTCTCAGATGCCATCAATCTTTCCCCCACCAATCACGTCCTGTATTCCAACCGATCCGCTGCTCACGCTTCTCTCCAGAATTACACTGACGCTTTAACCGATGCAAAGAAAACCGTCGAACTCAAACCTGATTGGTCAAAGGGTTACAGCCGTCTCGGTGCCGCTCATCTTGGTTTAGCCGATGCTCAAAAAGCCGCGGCGGCGAGTTTTTCTAGGCCACGTTCTGCGCCGGGTGCCAATCCGTTTGGTGATGCTTTTTCTGGACCGGAGATGTGGGCGAAACTTACTGCTGATCCTACAACTAGGAGAGTTATGCAAGCTTTTGGGGTTTTGCTTAATGTTAAGATTGGAAGAGGTGGTGATGATGTGGATATGCCTGATATGCCGTCCAGTTCGGAGAGGAAGAGAGCTGCTGAACCTGAGGTGGCAAAGCAGGCGGAGGTTGAGCCTGAGCCGGAACCGGAGCCAATGGAGGAGGTGGCTGATGAGGAGAAGGAAGTGAAGCAGAGGAAGGCTGAGGCGCAGAAGGAGAAGGAGGCTGGTAATGCTGCGTATAAGAAGAAGGATTTTGATACTGCGATTCTGCATTATTCGAAAGCTTTGGAATTGGATGATGAGGATGTTTCCTTCCTCACTAACCGTGCTGCTGTATACTTGGAAATGGGAAAGTATGAGGATTGCATAAAAGATTGTGATAAGGCTGTTGAAAGAGGACGAGAGCTAAGAGCAGACTACAAGATGATAGCAAGAGCTTTGACAAGGAAAGGAACTGCCATGGGTAAAACGGCAAAATGCTCTAAAGATTATGAACCTGTCATTGAGACTTACCAAAAAGCGCTTACAGAGCACCGTAACCCAGACACCCTGAAGAAACTCAATGAAGCTGAGAAGGCCAAGAAAGAACTAGAACAACAAGAATACTTCGATCCAAATTTGGCTGATGAGGAGAGAGAAAAAGGGAATGAATACTTTAAGCAGCAGAAGTATCCTGAAGCTATTAAGCATTACACAGAGTCTATAAAAAGAAACCCGAAAAATCCTAAGGCTTATAGTAACAGAGCTGCATGTTACACAAAACTGGGGGCAATGCCTGAAGGTTTAAAGGATGCAGAGAAGTGTATTGAGCTTGACCCGACCTTCACCAAGGGTTATACCCGGAAGGGTGCGGTTCAGTTTTTCATGAAAGAATATGAAAAGGCTTTGGAAACATACCAGGAAGGGTTGAAACATGATGCAAACAACCAGGAATTGCTTGAAGGGGTTCGAAGTTGTGTGAAGCAAATTAATAGAACCAGTCGTGGGGATGTAACTCCTGAAGAGTTGAAGGAGAGACAGGCTAAGGCAATGCAAGATCCAGAGATTCAGAACATCCTTCAAGACCCTGTTATGAGACAGGTATTGGTTGATTTCCAGGAAAATCCAAAGGCTGCACAGGAACATACCAAGAACCCGGGTGTGATGGACAAGATCCAAAAGCTGATCAGTGCCGGAATTGTCCAGATGAAGTAA
Protein sequence

>MsG0580024490.01.T01

MADEAKAKGNAAFSSGDFATAIRHFSDAINLSPTNHVLYSNRSAAHASLQNYTDALTDAKKTVELKPDWSKGYSRLGAAHLGLADAQKAAAASFSRPRSAPGANPFGDAFSGPEMWAKLTADPTTRRVMQAFGVLLNVKIGRGGDDVDMPDMPSSSERKRAAEPEVAKQAEVEPEPEPEPMEEVADEEKEVKQRKAEAQKEKEAGNAAYKKKDFDTAILHYSKALELDDEDVSFLTNRAAVYLEMGKYEDCIKDCDKAVERGRELRADYKMIARALTRKGTAMGKTAKCSKDYEPVIETYQKALTEHRNPDTLKKLNEAEKAKKELEQQEYFDPNLADEEREKGNEYFKQQKYPEAIKHYTESIKRNPKNPKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFTKGYTRKGAVQFFMKEYEKALETYQEGLKHDANNQELLEGVRSCVKQINRTSRGDVTPEELKERQAKAMQDPEIQNILQDPVMRQVLVDFQENPKAAQEHTKNPGVMDKIQKLISAGIVQMK*