AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015737.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015737.01.T01 MTR_3g075470 96.939 196 6 0 1 196 104 299 5.37e-143 400
MsG0380015737.01.T01 MTR_4g104440 82.564 195 34 0 1 195 35 229 7.03e-119 337
MsG0380015737.01.T01 MTR_4g104440 77.477 111 25 0 1 111 35 145 2.43e-58 181
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015737.01.T01 AT3G48330 76.410 195 46 0 1 195 20 214 1.99e-111 317
MsG0380015737.01.T01 AT3G48330 76.410 195 46 0 1 195 35 229 2.20e-111 317
MsG0380015737.01.T01 AT3G48330 76.410 195 46 0 1 195 35 229 2.20e-111 317
MsG0380015737.01.T01 AT5G50240 76.531 196 46 0 1 196 20 215 4.47e-111 316
MsG0380015737.01.T01 AT3G48330 76.410 195 46 0 1 195 88 282 1.05e-110 318
MsG0380015737.01.T01 AT5G50240 76.531 196 46 0 1 196 114 309 4.41e-110 317
MsG0380015737.01.T01 AT5G50240 76.531 196 46 0 1 196 111 306 5.60e-110 317
MsG0380015737.01.T01 AT5G50240 77.160 162 37 0 35 196 1 162 2.32e-91 264

Find 216 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATGTGTAATGAAAATTT+AGG 0.153899 3:+74465724 MsG0380015737.01.T01:three_prime_UTR
AGCTAATGTTTCATGAATTT+TGG 0.158798 3:+74462952 MsG0380015737.01.T01:three_prime_UTR
TTAGGATAATTATAAATATT+TGG 0.174333 3:+74467414 MsG0380015737.01.T01:three_prime_UTR
GAAAGATCTATAAGTTATTT+TGG 0.208058 3:+74463540 MsG0380015737.01.T01:three_prime_UTR
AATATAGATCCTAATTATTT+AGG 0.223453 3:-74463564 None:intergenic
GATGCTGACAGTTCTTCTTC+TGG 0.227074 3:+74464699 MsG0380015737.01.T01:three_prime_UTR
ATGAGCGGTTGGGGAATTTC+TGG 0.232163 3:-74462678 None:intergenic
TACAGCATTGGCTTGTATTC+TGG 0.233737 3:+74467377 MsG0380015737.01.T01:three_prime_UTR
AGTGTTCCCGTGAGGAAATT+AGG 0.245715 3:-74460831 None:intergenic
TCTTCTTCTGGGGATGAAAA+AGG 0.250949 3:+74464711 MsG0380015737.01.T01:three_prime_UTR
AATTATAAATATTTGGCTAT+TGG 0.254419 3:+74467421 MsG0380015737.01.T01:three_prime_UTR
GGCCCAAGAAAATATGTTAT+TGG 0.262395 3:+74464666 MsG0380015737.01.T01:three_prime_UTR
ATTGTCAAAACAGAACTTTC+TGG 0.277479 3:-74464571 None:intergenic
TCGACAACGATATTTGAATT+TGG 0.279642 3:-74463361 None:intergenic
GAGATGAGGTTGCAGCATTT+TGG 0.290138 3:+74461149 MsG0380015737.01.T01:five_prime_UTR
CTGGTGCATGAGTTATTATT+AGG 0.291597 3:+74467396 MsG0380015737.01.T01:three_prime_UTR
TAACTTATAGATCTTTCTTT+TGG 0.295052 3:-74463534 None:intergenic
GGTTTAAAAGAATTAGAATA+AGG 0.295616 3:-74463513 None:intergenic
TCTCTTGAACATCCTCTTCA+TGG 0.299916 3:-74467218 None:intergenic
GTTATACATATGTCTATAAA+TGG 0.302549 3:+74462984 MsG0380015737.01.T01:three_prime_UTR
TTATTCTCAGAATAATTAAT+AGG 0.303666 3:+74467285 MsG0380015737.01.T01:three_prime_UTR
TTTGCAAGGGAAACCAATTC+AGG 0.304555 3:-74462054 None:intergenic
CCGTGAGGAAATTAGGGTTT+TGG 0.309308 3:-74460824 None:intergenic
GGCATTAACCTTCCGAAATC+AGG 0.313521 3:-74462881 None:intergenic
TATGACAACATAAATCCTTC+TGG 0.314471 3:+74465938 MsG0380015737.01.T01:three_prime_UTR
GCATCATATGGAGCAAATTC+TGG 0.316547 3:-74462633 None:intergenic
ATGCTGACAGTTCTTCTTCT+GGG 0.327005 3:+74464700 MsG0380015737.01.T01:three_prime_UTR
GATACTATTTCCTACCTCTA+TGG 0.327620 3:+74463287 MsG0380015737.01.T01:three_prime_UTR
GAAATGGTTGACAGTGTATA+TGG 0.327691 3:+74460631 MsG0380015737.01.T01:five_prime_UTR
ACAGATACCTTTGGCAAGAT+TGG 0.342036 3:-74465784 None:intergenic
CGTGGAGCATATTCCTGAAT+TGG 0.346519 3:+74462041 MsG0380015737.01.T01:CDS
GAATCCTTACCAATTGGATA+TGG 0.348353 3:-74463319 None:intergenic
AGTCTTTAATCCAATTGTTC+TGG 0.353136 3:+74465228 MsG0380015737.01.T01:three_prime_UTR
CACGCCAACAGCACAGCCTT+GGG 0.355685 3:-74462022 None:intergenic
ATGCCTCAGGTGTCAGTGTT+TGG 0.359755 3:+74462899 MsG0380015737.01.T01:three_prime_UTR
GGCCATGGGGCTATCATCAT+AGG 0.361392 3:-74461248 None:intergenic
GTGTTCCCGTGAGGAAATTA+GGG 0.363442 3:-74460830 None:intergenic
GCATTATACATACAAGTATT+AGG 0.368087 3:-74463666 None:intergenic
AACATACAACTCACGTACTA+TGG 0.371244 3:+74465335 MsG0380015737.01.T01:three_prime_UTR
GCCCAAGAAAATATGTTATT+GGG 0.372926 3:+74464667 MsG0380015737.01.T01:three_prime_UTR
CAATGTGTAATGAAAATTTA+GGG 0.377068 3:+74465725 MsG0380015737.01.T01:three_prime_UTR
GGAATCTGAAATCCTGATTT+CGG 0.378381 3:+74462869 MsG0380015737.01.T01:three_prime_UTR
CATTCTCCACGGGTTCGAAA+TGG 0.384118 3:-74465888 None:intergenic
TCCAACTTCTGATTCACATT+TGG 0.385992 3:+74465975 MsG0380015737.01.T01:three_prime_UTR
ATTGTGTGAAAACTTAATTT+TGG 0.388259 3:+74463244 MsG0380015737.01.T01:three_prime_UTR
GGATGTAAGCACATGCTGTT+AGG 0.390150 3:+74463016 MsG0380015737.01.T01:three_prime_UTR
ATGTCGAGGGCGTGCATCCC+AGG 0.393536 3:-74461346 None:intergenic
TGGAGTAATCACATCAAGTA+AGG 0.394389 3:+74461169 MsG0380015737.01.T01:five_prime_UTR
GAATCATCATCCAGAACAAT+TGG 0.403863 3:-74465238 None:intergenic
TACAATTCCCATTCATCAAT+GGG 0.405064 3:-74465917 None:intergenic
CAGATACCTTTGGCAAGATT+GGG 0.414767 3:-74465783 None:intergenic
GATGATGGGTGGTGCATGTA+TGG 0.422710 3:+74463827 MsG0380015737.01.T01:three_prime_UTR
AGTAACACATGACCACAAAA+TGG 0.424585 3:-74467469 None:intergenic
TTCTCCCACCAGGCTTCAAC+TGG 0.425156 3:-74462704 None:intergenic
GCATTGTAGCCTATGGCCAT+GGG 0.428404 3:-74461262 None:intergenic
GTCTCCATTATGCAACTATT+CGG 0.429637 3:+74465305 MsG0380015737.01.T01:three_prime_UTR
GGGATGCACGCCCTCGACAT+TGG 0.432241 3:+74461349 MsG0380015737.01.T01:CDS
CATCCAGGACACTTTATGAT+TGG 0.433295 3:-74465265 None:intergenic
TTGATCATTAGCATATAGAT+TGG 0.433905 3:+74463643 MsG0380015737.01.T01:three_prime_UTR
TCTTGTAAAATTTACAGCAT+TGG 0.439752 3:+74467365 MsG0380015737.01.T01:three_prime_UTR
TCCCTTTCTGTTCATGTTGG+TGG 0.439830 3:+74462123 MsG0380015737.01.T01:CDS
CATTTCGAACCCGTGGAGAA+TGG 0.439913 3:+74465889 MsG0380015737.01.T01:three_prime_UTR
ATCAGAAGTTGGATTGTGTT+TGG 0.441485 3:-74465965 None:intergenic
GAATCATATGCCAACAGTAC+AGG 0.443394 3:-74460708 None:intergenic
GTCTATAAATGGCTGGAACT+TGG 0.443851 3:+74462995 MsG0380015737.01.T01:three_prime_UTR
GGCATTGTAGCCTATGGCCA+TGG 0.445929 3:-74461263 None:intergenic
GCTATTGGATAGCTAGCAAA+TGG 0.446161 3:+74467436 MsG0380015737.01.T01:three_prime_UTR
TTCACATTTGGCACTATCTC+GGG 0.450619 3:+74465987 MsG0380015737.01.T01:three_prime_UTR
ATTCTCCACGGGTTCGAAAT+GGG 0.453582 3:-74465887 None:intergenic
CCACGCCAACAGCACAGCCT+TGG 0.454057 3:-74462023 None:intergenic
TTTCGGAAGGTTAATGCCTC+AGG 0.456940 3:+74462886 MsG0380015737.01.T01:three_prime_UTR
TGAGATGAATCCTTACCAAT+TGG 0.462464 3:-74463325 None:intergenic
CAACATATTTCAAGATTTGA+AGG 0.465336 3:+74462743 MsG0380015737.01.T01:CDS
ATCATAGGGTGATGATCCAC+TGG 0.465843 3:-74461233 None:intergenic
TCAACTGGTCGATGAGCGGT+TGG 0.466898 3:-74462689 None:intergenic
ATTTCAAGATTTGAAGGTGG+TGG 0.467193 3:+74462749 MsG0380015737.01.T01:CDS
CCAACGTGAATGGCATCATA+TGG 0.468149 3:-74462645 None:intergenic
ATTTCGAACCCGTGGAGAAT+GGG 0.468496 3:+74465890 MsG0380015737.01.T01:three_prime_UTR
ATGACAACATAAATCCTTCT+GGG 0.468782 3:+74465939 MsG0380015737.01.T01:three_prime_UTR
AACTGGTCGATGAGCGGTTG+GGG 0.472570 3:-74462687 None:intergenic
CCAGGACACTTTATGATTGG+TGG 0.472639 3:-74465262 None:intergenic
ATTCACATTTGGCACTATCT+CGG 0.473518 3:+74465986 MsG0380015737.01.T01:three_prime_UTR
TCTTCCGAATAGTTGCATAA+TGG 0.479849 3:-74465309 None:intergenic
ATACAATTCCCATTCATCAA+TGG 0.480237 3:-74465918 None:intergenic
CACGCCCTCGACATTGGCTC+TGG 0.480887 3:+74461355 MsG0380015737.01.T01:CDS
GGGGAGGATGCAACCAGGAT+GGG 0.482145 3:+74465745 MsG0380015737.01.T01:three_prime_UTR
GATGTGGAAAGTGTGAGAAA+AGG 0.491602 3:+74460675 MsG0380015737.01.T01:five_prime_UTR
CTCGAAGACAATTTACAACC+TGG 0.492719 3:+74461328 MsG0380015737.01.T01:CDS
CTCATCGACCAGTTGAAGCC+TGG 0.493421 3:+74462696 MsG0380015737.01.T01:CDS
ATGCATGTGAGGTGCAGATA+TGG 0.494165 3:-74461287 None:intergenic
CAACTGGTCGATGAGCGGTT+GGG 0.495725 3:-74462688 None:intergenic
TACATATGTCTATAAATGGC+TGG 0.495985 3:+74462988 MsG0380015737.01.T01:three_prime_UTR
GGGTGTCCCCATTGATGAAT+GGG 0.496051 3:+74465910 MsG0380015737.01.T01:three_prime_UTR
CAAGTAAGGGTCTCAAGTAA+TGG 0.496574 3:+74461183 MsG0380015737.01.T01:exon
GGAACTTGAATGCACACACT+TGG 0.496861 3:+74462920 MsG0380015737.01.T01:three_prime_UTR
AACAAATACCAGAGTAAGAC+AGG 0.498241 3:-74463884 None:intergenic
TATGTTGATCCATATCCAAT+TGG 0.501373 3:+74463310 MsG0380015737.01.T01:three_prime_UTR
TTGGAACACAGATAGAGAAC+AGG 0.502250 3:-74460799 None:intergenic
AACACTATCTTCTTAAGAGC+AGG 0.503511 3:+74460848 MsG0380015737.01.T01:five_prime_UTR
ATTGTGTTTGGTTCCCCAGA+AGG 0.506185 3:-74465953 None:intergenic
TCTTGAAATATGTTGCCTAC+AGG 0.510702 3:-74462735 None:intergenic
TTGTTATGTTTACAGATGGA+AGG 0.512602 3:+74462601 MsG0380015737.01.T01:intron
TGCTGCCGCTCCAACGTGAA+TGG 0.515731 3:-74462655 None:intergenic
GCCAAATGTGAATCAGAAGT+TGG 0.515981 3:-74465976 None:intergenic
CCACCAATCATAAAGTGTCC+TGG 0.516232 3:+74465262 MsG0380015737.01.T01:three_prime_UTR
CTGATGGTTCTATCAGCGTC+CGG 0.518501 3:+74462781 MsG0380015737.01.T01:CDS
GTATATGGTATATTGATGAT+TGG 0.520395 3:+74460646 MsG0380015737.01.T01:five_prime_UTR
TCAACTTCGCGGCTACTAAG+AGG 0.520809 3:+74462848 MsG0380015737.01.T01:exon
AGGGGAGGATGCAACCAGGA+TGG 0.524540 3:+74465744 MsG0380015737.01.T01:three_prime_UTR
GGAGCAGAAGTAGCGGATAC+CGG 0.526198 3:+74467195 MsG0380015737.01.T01:three_prime_UTR
TGCTGACAGTTCTTCTTCTG+GGG 0.528543 3:+74464701 MsG0380015737.01.T01:three_prime_UTR
TGTTATGTTTACAGATGGAA+GGG 0.528626 3:+74462602 MsG0380015737.01.T01:intron
GCTTAAACTCTGCCCCATCC+TGG 0.529669 3:-74465758 None:intergenic
TATGGTGGCATTGTAGCCTA+TGG 0.533152 3:-74461269 None:intergenic
ACCACCAACATGAACAGAAA+GGG 0.536927 3:-74462124 None:intergenic
ATGTTTACAGATGGAAGGGA+AGG 0.543176 3:+74462606 MsG0380015737.01.T01:intron
AAGCTTCCCAATCTTGCCAA+AGG 0.543252 3:+74465777 MsG0380015737.01.T01:three_prime_UTR
GGTTCCCTTTCTGTTCATGT+TGG 0.543592 3:+74462120 MsG0380015737.01.T01:CDS
GTTGAAGCCTGGTGGGAGAA+TGG 0.543903 3:+74462707 MsG0380015737.01.T01:CDS
TGGGTGTCCCCATTGATGAA+TGG 0.544209 3:+74465909 MsG0380015737.01.T01:three_prime_UTR
GGACCCCAAGGCTGTGCTGT+TGG 0.545041 3:+74462018 MsG0380015737.01.T01:CDS
GAACAGGACGGTGGTTCTGA+GGG 0.548709 3:-74460783 None:intergenic
CCAAGGCTGTGCTGTTGGCG+TGG 0.550117 3:+74462023 MsG0380015737.01.T01:CDS
TGATCCATATCCAATTGGTA+AGG 0.550541 3:+74463315 MsG0380015737.01.T01:three_prime_UTR
CAAAACCCTAATTTCCTCAC+GGG 0.552282 3:+74460825 MsG0380015737.01.T01:five_prime_UTR
TTGAACATCCTCTTCATGGC+CGG 0.553402 3:-74467214 None:intergenic
AGAACAGGACGGTGGTTCTG+AGG 0.554903 3:-74460784 None:intergenic
AGAGCTTTGTTTGTCCCCAG+TGG 0.555716 3:+74461217 MsG0380015737.01.T01:CDS
GTCTTCGAGCAACTGAAGGC+AGG 0.556540 3:-74461314 None:intergenic
GGGAGGATGCAACCAGGATG+GGG 0.557046 3:+74465746 MsG0380015737.01.T01:three_prime_UTR
GATGATAGCCCCATGGCCAT+AGG 0.557148 3:+74461253 MsG0380015737.01.T01:CDS
TTCAGCCCATTTCGAACCCG+TGG 0.559054 3:+74465882 MsG0380015737.01.T01:three_prime_UTR
TTACAGATGGAAGGGAAGGT+TGG 0.561252 3:+74462610 MsG0380015737.01.T01:intron
GCCATGGGGCTATCATCATA+GGG 0.564616 3:-74461247 None:intergenic
TACCACCAACATGAACAGAA+AGG 0.566595 3:-74462125 None:intergenic
CCAAAACCCTAATTTCCTCA+CGG 0.567128 3:+74460824 MsG0380015737.01.T01:five_prime_UTR
ATAGTACGTGAGTTGTATGT+TGG 0.567164 3:-74465333 None:intergenic
GTTCTTACTTATGCCACTCA+CGG 0.567789 3:-74461115 None:intergenic
TTGAGCTTCTCGACTAGTGA+GGG 0.572756 3:-74462829 None:intergenic
CGATGCAAATGATATTCCCA+TGG 0.573667 3:+74466083 MsG0380015737.01.T01:three_prime_UTR
AGCGGATACCGGCCATGAAG+AGG 0.575075 3:+74467206 MsG0380015737.01.T01:three_prime_UTR
AAATCTCACCTGTCTTACTC+TGG 0.575134 3:+74463876 MsG0380015737.01.T01:three_prime_UTR
TGTCCGTGTTTGCAGGAACA+GGG 0.575995 3:+74461965 MsG0380015737.01.T01:intron
ATAGCTAGCAAATGGATGGT+TGG 0.576264 3:+74467444 MsG0380015737.01.T01:three_prime_UTR
CATGGGAATATCATTTGCAT+CGG 0.579187 3:-74466082 None:intergenic
GCGTTGATGGTTGGACCCCA+AGG 0.581178 3:+74462006 MsG0380015737.01.T01:CDS
TCTGAAATCCTGATTTCGGA+AGG 0.582031 3:+74462873 MsG0380015737.01.T01:three_prime_UTR
AACACTTGAGGTCATTGAGA+AGG 0.583096 3:+74464631 MsG0380015737.01.T01:three_prime_UTR
TAGAAATGACCCTGTACTGT+TGG 0.583778 3:+74460698 MsG0380015737.01.T01:five_prime_UTR
AGTCGAGAAGCTCAACTTCG+CGG 0.584055 3:+74462837 MsG0380015737.01.T01:CDS
AACGAACGGAGGTCTCAGTC+CGG 0.586260 3:-74462800 None:intergenic
CAGAGATTCTGCTCCGTGAG+TGG 0.586541 3:+74461102 MsG0380015737.01.T01:intron
GCAGCTACACAATTGCAAGA+TGG 0.588420 3:+74462099 MsG0380015737.01.T01:CDS
TCGAAGACAATTTACAACCT+GGG 0.588607 3:+74461329 MsG0380015737.01.T01:CDS
CTCTGGCGGAGCAGAAGTAG+CGG 0.588679 3:+74467188 MsG0380015737.01.T01:three_prime_UTR
AATTGTCTTCGAGCAACTGA+AGG 0.589044 3:-74461318 None:intergenic
TCTTCTTCATCGTAAGACAA+TGG 0.589396 3:-74463792 None:intergenic
AACAAAGCATGGTGGAGATG+AGG 0.591004 3:+74461135 MsG0380015737.01.T01:five_prime_UTR
AACGTCTGAGGCATCACTGA+TGG 0.592286 3:-74466058 None:intergenic
AATCATATGCCAACAGTACA+GGG 0.592620 3:-74460707 None:intergenic
TGTATGTATAATGCAGTCCA+TGG 0.593189 3:+74463675 MsG0380015737.01.T01:three_prime_UTR
TGGGGACACCCATTCTCCAC+GGG 0.594896 3:-74465898 None:intergenic
TTGGATAGCTAGCAAATGGA+TGG 0.600630 3:+74467440 MsG0380015737.01.T01:three_prime_UTR
GGAGTAATCACATCAAGTAA+GGG 0.600642 3:+74461170 MsG0380015737.01.T01:five_prime_UTR
ATCGACCAGTTGAAGCCTGG+TGG 0.601806 3:+74462699 MsG0380015737.01.T01:CDS
TGATGATTGGAAAGAAGATG+TGG 0.602680 3:+74460659 MsG0380015737.01.T01:five_prime_UTR
GTTGAGCTTCTCGACTAGTG+AGG 0.607866 3:-74462830 None:intergenic
ATTTGCATCGGTAACGTCTG+AGG 0.608960 3:-74466070 None:intergenic
ATGGGGACACCCATTCTCCA+CGG 0.609003 3:-74465899 None:intergenic
GATCAACATACCATAGAGGT+AGG 0.612596 3:-74463297 None:intergenic
TCGACCAGTTGAAGCCTGGT+GGG 0.613556 3:+74462700 MsG0380015737.01.T01:CDS
GTGGTGGATAAGAATTCTGA+TGG 0.614160 3:+74462765 MsG0380015737.01.T01:CDS
TTTGATGTCAAATCACATCC+AGG 0.617220 3:-74465280 None:intergenic
CACACGTGACATTCTAACCA+TGG 0.620900 3:-74463692 None:intergenic
CTGATATCGATGAACACTTG+AGG 0.621799 3:+74464619 MsG0380015737.01.T01:three_prime_UTR
CATATTTCAAGATTTGAAGG+TGG 0.625686 3:+74462746 MsG0380015737.01.T01:CDS
TTGAGAAGGATCCGAACTCG+TGG 0.626127 3:+74464645 MsG0380015737.01.T01:three_prime_UTR
AATACCAGAGCCAATGTCGA+GGG 0.626629 3:-74461359 None:intergenic
AGGACGGTGGTTCTGAGGGA+AGG 0.626815 3:-74460779 None:intergenic
GGCTTCAACTGGTCGATGAG+CGG 0.627557 3:-74462693 None:intergenic
CAATTAGTCAATACATTGTG+AGG 0.631740 3:+74467309 MsG0380015737.01.T01:three_prime_UTR
GGAATCACCATTCTCCCACC+AGG 0.633275 3:-74462714 None:intergenic
CCATATGATGCCATTCACGT+TGG 0.634013 3:+74462645 MsG0380015737.01.T01:CDS
TGACAACATAAATCCTTCTG+GGG 0.634184 3:+74465940 MsG0380015737.01.T01:three_prime_UTR
TGATGCCATTCACGTTGGAG+CGG 0.634790 3:+74462650 MsG0380015737.01.T01:CDS
ATTTAGGGGAGGATGCAACC+AGG 0.638700 3:+74465740 MsG0380015737.01.T01:three_prime_UTR
AGAACTTTCTGGCACCTCGT+AGG 0.638922 3:-74464560 None:intergenic
GTGTAATGAAAATTTAGGGG+AGG 0.642846 3:+74465729 MsG0380015737.01.T01:three_prime_UTR
TATGGATCAACATACCATAG+AGG 0.643197 3:-74463301 None:intergenic
GATGCAAATGATATTCCCAT+GGG 0.644240 3:+74466084 MsG0380015737.01.T01:three_prime_UTR
TAATACCAGAGCCAATGTCG+AGG 0.645938 3:-74461360 None:intergenic
CAGCATAACAAGACACGCGG+AGG 0.646482 3:-74460731 None:intergenic
ACCCTATGATGATAGCCCCA+TGG 0.649767 3:+74461246 MsG0380015737.01.T01:CDS
TGTTCAAGAGAGAAGTAACA+AGG 0.651078 3:+74467230 MsG0380015737.01.T01:three_prime_UTR
AATGTGTAATGAAAATTTAG+GGG 0.651820 3:+74465726 MsG0380015737.01.T01:three_prime_UTR
GCATAAGTAAGAACAAAGCA+TGG 0.654569 3:+74461124 MsG0380015737.01.T01:five_prime_UTR
AGTGAGGGGCACATAACGAA+CGG 0.660875 3:-74462814 None:intergenic
TCATAGGGTGATGATCCACT+GGG 0.661817 3:-74461232 None:intergenic
CATTGTAGCCTATGGCCATG+GGG 0.664652 3:-74461261 None:intergenic
CATGTGAGGTGCAGATATGG+TGG 0.665898 3:-74461284 None:intergenic
GGGAGAATGGTGATTCCTGT+AGG 0.672669 3:+74462720 MsG0380015737.01.T01:CDS
AGCATAACAAGACACGCGGA+GGG 0.672908 3:-74460730 None:intergenic
ACGCCAACAGCACAGCCTTG+GGG 0.677703 3:-74462021 None:intergenic
CTGCAGCATAACAAGACACG+CGG 0.684805 3:-74460734 None:intergenic
GTTCCAAACACTGACACCTG+AGG 0.692802 3:-74462902 None:intergenic
TGAGCTTCTCGACTAGTGAG+GGG 0.693663 3:-74462828 None:intergenic
CATCTTCAACAACTCCTACG+AGG 0.712692 3:+74464546 MsG0380015737.01.T01:three_prime_UTR
TAAGTAAGAACAAAGCATGG+TGG 0.712876 3:+74461127 MsG0380015737.01.T01:five_prime_UTR
AGGCAGGTAGCATGCATGTG+AGG 0.715917 3:-74461298 None:intergenic
ACAATTCCCATTCATCAATG+GGG 0.721733 3:-74465916 None:intergenic
AAGAAGATAGTGTTCCCGTG+AGG 0.732693 3:-74460839 None:intergenic
GAGGGGCACATAACGAACGG+AGG 0.751567 3:-74462811 None:intergenic
ACAGATAGAGAACAGGACGG+TGG 0.757779 3:-74460792 None:intergenic
AACACAGATAGAGAACAGGA+CGG 0.761174 3:-74460795 None:intergenic
AGTGAATCTTGACATCAACA+CGG 0.769223 3:-74463392 None:intergenic
CATAGGGTGATGATCCACTG+GGG 0.812637 3:-74461231 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTAATACATATATGTA+TGG - Chr3:74466938-74466957 None:intergenic 10.0%
!! TTAGGATAATTATAAATATT+TGG + Chr3:74467414-74467433 MsG0380015737.01.T01:three_prime_UTR 10.0%
!! TTTATATAAAATTGAGTAAA+TGG + Chr3:74464060-74464079 MsG0380015737.01.T01:intron 10.0%
!! AAGATGTTTAAAAAAAGAAA+TGG + Chr3:74460615-74460634 MsG0380015737.01.T01:five_prime_UTR 15.0%
!! AAGCAAGAAATAATTATAAT+AGG - Chr3:74461407-74461426 None:intergenic 15.0%
!! AATATAGATCCTAATTATTT+AGG - Chr3:74463567-74463586 None:intergenic 15.0%
!! AATTATAAATATTTGGCTAT+TGG + Chr3:74467421-74467440 MsG0380015737.01.T01:three_prime_UTR 15.0%
!! ACATATATGTATTAAATATC+TGG + Chr3:74466939-74466958 MsG0380015737.01.T01:intron 15.0%
!! CAATAAATTTATTCATAGTT+TGG - Chr3:74466774-74466793 None:intergenic 15.0%
!! GAACATAAATTATAAAATAC+AGG - Chr3:74465369-74465388 None:intergenic 15.0%
!! TGTATAATAAAATTTGACAA+TGG + Chr3:74465634-74465653 MsG0380015737.01.T01:intron 15.0%
!! TTATTCTCAGAATAATTAAT+AGG + Chr3:74467285-74467304 MsG0380015737.01.T01:three_prime_UTR 15.0%
!!! AAATAATACATCTTGATAAT+AGG - Chr3:74462331-74462350 None:intergenic 15.0%
!!! TAATATTTTTTTCCGTTTTA+AGG + Chr3:74466623-74466642 MsG0380015737.01.T01:intron 15.0%
!!! TAATGACTTTGTTTTATAAA+TGG + Chr3:74465454-74465473 MsG0380015737.01.T01:intron 15.0%
!!! TATTTTCTTCGTTTATTTTT+AGG - Chr3:74462305-74462324 None:intergenic 15.0%
!!! TGTTTTATGTTTTTTAATTG+TGG + Chr3:74463145-74463164 MsG0380015737.01.T01:three_prime_UTR 15.0%
!! AATAAAATTTGACAATGGTA+TGG + Chr3:74465639-74465658 MsG0380015737.01.T01:intron 20.0%
!! AATGTGTAATGAAAATTTAG+GGG + Chr3:74465726-74465745 MsG0380015737.01.T01:three_prime_UTR 20.0%
!! ACTAAAGATAGAAAATGAAT+AGG + Chr3:74465591-74465610 MsG0380015737.01.T01:intron 20.0%
!! AGAAAATTTGTATGTATTCA+TGG + Chr3:74461062-74461081 MsG0380015737.01.T01:intron 20.0%
!! AGAAGAAAAAATTATGATGA+TGG + Chr3:74463812-74463831 MsG0380015737.01.T01:three_prime_UTR 20.0%
!! ATATCAATTAAGAGAAAAAG+AGG + Chr3:74461014-74461033 MsG0380015737.01.T01:intron 20.0%
!! ATTCATGATATTAAATCTAG+TGG + Chr3:74462446-74462465 MsG0380015737.01.T01:intron 20.0%
!! ATTGAAATTTGATATCTGAA+TGG + Chr3:74465674-74465693 MsG0380015737.01.T01:intron 20.0%
!! CAAAATTGAAATCATCTAAA+TGG - Chr3:74465045-74465064 None:intergenic 20.0%
!! CAATGTGTAATGAAAATTTA+GGG + Chr3:74465725-74465744 MsG0380015737.01.T01:three_prime_UTR 20.0%
!! CATAAATTATAAAATACAGG+AGG - Chr3:74465366-74465385 None:intergenic 20.0%
!! CATTTGTGTATTAAAATATC+TGG + Chr3:74467043-74467062 MsG0380015737.01.T01:intron 20.0%
!! GAAGAAAAAATTATGATGAT+GGG + Chr3:74463813-74463832 MsG0380015737.01.T01:three_prime_UTR 20.0%
!! GATTATATTAATCTTTGTTG+AGG + Chr3:74462501-74462520 MsG0380015737.01.T01:intron 20.0%
!! GCAATTATGAATATCAAATA+TGG + Chr3:74460986-74461005 MsG0380015737.01.T01:intron 20.0%
!! GGTTTAAAAGAATTAGAATA+AGG - Chr3:74463516-74463535 None:intergenic 20.0%
!! GTTATACATATGTCTATAAA+TGG + Chr3:74462984-74463003 MsG0380015737.01.T01:three_prime_UTR 20.0%
!! TAATCATAATGTTCAGTTTA+TGG + Chr3:74464307-74464326 MsG0380015737.01.T01:intron 20.0%
!! TACAATAATTTGGAAATCTA+TGG - Chr3:74466463-74466482 None:intergenic 20.0%
!! TACTGTAAAGTACAATAATT+TGG - Chr3:74466473-74466492 None:intergenic 20.0%
!! TCAAACATAACTTATTAATC+TGG - Chr3:74464848-74464867 None:intergenic 20.0%
!! TCAATAAAAATATTGCTTCT+TGG + Chr3:74466216-74466235 MsG0380015737.01.T01:intron 20.0%
!! TTAATTGTTATGTTTACAGA+TGG + Chr3:74462597-74462616 MsG0380015737.01.T01:intron 20.0%
!! TTACACTAATTAATGATAAG+CGG + Chr3:74461577-74461596 MsG0380015737.01.T01:intron 20.0%
!!! AACTTTTCTTTTGTTTATAG+CGG + Chr3:74464778-74464797 MsG0380015737.01.T01:intron 20.0%
!!! ACAGTTTTTTTTTCATTTGT+TGG - Chr3:74464430-74464449 None:intergenic 20.0%
!!! ATCTTTAGTTTTTACTACAA+TGG - Chr3:74465580-74465599 None:intergenic 20.0%
!!! ATTCTAATTTCTCTCTTTTA+GGG + Chr3:74460923-74460942 MsG0380015737.01.T01:intron 20.0%
!!! ATTGTGTGAAAACTTAATTT+TGG + Chr3:74463244-74463263 MsG0380015737.01.T01:three_prime_UTR 20.0%
!!! CAGTTTTTTTTTCATTTGTT+GGG - Chr3:74464429-74464448 None:intergenic 20.0%
!!! CTTTTAAAGTAACCTTAAAA+CGG - Chr3:74466638-74466657 None:intergenic 20.0%
!!! GAAAGATCTATAAGTTATTT+TGG + Chr3:74463540-74463559 MsG0380015737.01.T01:three_prime_UTR 20.0%
!!! GCAATATTTTTATTGAATGT+AGG - Chr3:74466212-74466231 None:intergenic 20.0%
!!! TAACTTATAGATCTTTCTTT+TGG - Chr3:74463537-74463556 None:intergenic 20.0%
!!! TAAGGTTACTTTAAAAGATA+CGG + Chr3:74466641-74466660 MsG0380015737.01.T01:intron 20.0%
!!! TATTCTAATTTCTCTCTTTT+AGG + Chr3:74460922-74460941 MsG0380015737.01.T01:intron 20.0%
!!! TATTTTGGTCCTAAATAATT+AGG + Chr3:74463555-74463574 MsG0380015737.01.T01:three_prime_UTR 20.0%
!!! TCTATATATTTTATTGTGCT+TGG + Chr3:74464868-74464887 MsG0380015737.01.T01:intron 20.0%
!!! TGATAAAGTATCCATTTTTT+AGG + Chr3:74465402-74465421 MsG0380015737.01.T01:intron 20.0%
! AAAATACTTGACTGTTAATG+TGG + Chr3:74466796-74466815 MsG0380015737.01.T01:intron 25.0%
! AAATCATCTAAATGGTTTAG+AGG - Chr3:74465037-74465056 None:intergenic 25.0%
! AAATGTATGAAATATACTGC+AGG - Chr3:74467028-74467047 None:intergenic 25.0%
! AGAAATAAAAATCCGAAAAG+CGG - Chr3:74466602-74466621 None:intergenic 25.0%
! ATAACAAAAACTCTTGAATG+AGG - Chr3:74464402-74464421 None:intergenic 25.0%
! ATATGTATGGAATGTACTAA+AGG - Chr3:74466925-74466944 None:intergenic 25.0%
! ATTCAATTACTTGCAAAATG+TGG + Chr3:74466990-74467009 MsG0380015737.01.T01:intron 25.0%
! CAACATATTTCAAGATTTGA+AGG + Chr3:74462743-74462762 MsG0380015737.01.T01:CDS 25.0%
! CATATTCTCAGCAATTTAAA+AGG + Chr3:74466684-74466703 MsG0380015737.01.T01:intron 25.0%
! CCAATGTGTAATGAAAATTT+AGG + Chr3:74465724-74465743 MsG0380015737.01.T01:three_prime_UTR 25.0%
! CTGTTCTGATCTTAATAAAA+AGG + Chr3:74465540-74465559 MsG0380015737.01.T01:intron 25.0%
! GCATTATACATACAAGTATT+AGG - Chr3:74463669-74463688 None:intergenic 25.0%
! GGTTATTATATTCTGTGATA+TGG + Chr3:74466828-74466847 MsG0380015737.01.T01:intron 25.0%
! TAAATTGTGATAAGCACAAA+TGG - Chr3:74464370-74464389 None:intergenic 25.0%
! TAACAAAAACTCTTGAATGA+GGG - Chr3:74464401-74464420 None:intergenic 25.0%
! TATTCAATTACTTGCAAATG+TGG + Chr3:74466888-74466907 MsG0380015737.01.T01:intron 25.0%
! TCAAACCAAATCCTAAAAAA+TGG - Chr3:74465416-74465435 None:intergenic 25.0%
! TCTTGTAAAATTTACAGCAT+TGG + Chr3:74467365-74467384 MsG0380015737.01.T01:three_prime_UTR 25.0%
! TGAACTAGTTAAAATCATCA+AGG + Chr3:74461500-74461519 MsG0380015737.01.T01:intron 25.0%
! TTGATCATTAGCATATAGAT+TGG + Chr3:74463643-74463662 MsG0380015737.01.T01:three_prime_UTR 25.0%
! TTTATAACTTATCCAAAAGC+AGG - Chr3:74466123-74466142 None:intergenic 25.0%
!! AAGGTTACTTTAAAAGATAC+GGG + Chr3:74466642-74466661 MsG0380015737.01.T01:intron 25.0%
!! AATGTTTCATGAATTTTGGA+AGG + Chr3:74462956-74462975 MsG0380015737.01.T01:three_prime_UTR 25.0%
!! AATTTTTCGTTGTTGTGTTA+TGG + Chr3:74461462-74461481 MsG0380015737.01.T01:intron 25.0%
!! ACAAAACAAAACAAACCTTT+TGG + Chr3:74464020-74464039 MsG0380015737.01.T01:intron 25.0%
!! AGCTAATGTTTCATGAATTT+TGG + Chr3:74462952-74462971 MsG0380015737.01.T01:three_prime_UTR 25.0%
!! CCTAAATTTTCATTACACAT+TGG - Chr3:74465727-74465746 None:intergenic 25.0%
!! CTGAATATTTTCTTTTGCAA+GGG - Chr3:74462070-74462089 None:intergenic 25.0%
!! GTATATGGTATATTGATGAT+TGG + Chr3:74460646-74460665 MsG0380015737.01.T01:five_prime_UTR 25.0%
!! TCAAGATGTATTATTTCTTG+AGG + Chr3:74462335-74462354 MsG0380015737.01.T01:intron 25.0%
!! TCCCAATAACATATTTTCTT+GGG - Chr3:74464671-74464690 None:intergenic 25.0%
!! TCTGAATATTTTCTTTTGCA+AGG - Chr3:74462071-74462090 None:intergenic 25.0%
!! TTCAAATTAGTGTTGAAATG+AGG + Chr3:74467098-74467117 MsG0380015737.01.T01:intron 25.0%
!! TTCCCAATAACATATTTTCT+TGG - Chr3:74464672-74464691 None:intergenic 25.0%
!!! AAAGTTCTGTTTTGACAATT+TGG + Chr3:74464575-74464594 MsG0380015737.01.T01:three_prime_UTR 25.0%
!!! AGTATCCATTTTTTAGGATT+TGG + Chr3:74465408-74465427 MsG0380015737.01.T01:intron 25.0%
!!! ATCTCTATTTTCTGTTTTAG+TGG - Chr3:74462370-74462389 None:intergenic 25.0%
!!! ATTGTATGCAATCTAGTTTT+TGG - Chr3:74461642-74461661 None:intergenic 25.0%
!!! TTGTATGCAATCTAGTTTTT+GGG - Chr3:74461641-74461660 None:intergenic 25.0%
AAACTAGATTGCATACAATG+TGG + Chr3:74461643-74461662 MsG0380015737.01.T01:intron 30.0%
AAATATTGCTTCTTGGTATG+AGG + Chr3:74466223-74466242 MsG0380015737.01.T01:intron 30.0%
AAATCTATGGTAACACTATC+AGG - Chr3:74466450-74466469 None:intergenic 30.0%
AAGTCAGTACTATTTCACAA+AGG + Chr3:74464243-74464262 MsG0380015737.01.T01:intron 30.0%
AATATTGCTTCTTGGTATGA+GGG + Chr3:74466224-74466243 MsG0380015737.01.T01:intron 30.0%
AATGATAAGCGGTAATGATA+AGG + Chr3:74461588-74461607 MsG0380015737.01.T01:intron 30.0%
AATGCAATGAGAGAAATAGT+AGG - Chr3:74460899-74460918 None:intergenic 30.0%
ACAAAAAAAATGAAGTAGCG+AGG - Chr3:74463918-74463937 None:intergenic 30.0%
AGTCTTTAATCCAATTGTTC+TGG + Chr3:74465228-74465247 MsG0380015737.01.T01:three_prime_UTR 30.0%
ATACAATTCCCATTCATCAA+TGG - Chr3:74465921-74465940 None:intergenic 30.0%
ATACCACAAGAAGCAATAAA+GGG - Chr3:74466415-74466434 None:intergenic 30.0%
ATGACAACATAAATCCTTCT+GGG + Chr3:74465939-74465958 MsG0380015737.01.T01:three_prime_UTR 30.0%
ATGAGAGAAATAGTAGGAAA+AGG - Chr3:74460893-74460912 None:intergenic 30.0%
ATGGTAGACAAAGGTAAAAA+AGG + Chr3:74464995-74465014 MsG0380015737.01.T01:intron 30.0%
ATTGATTGAATGATCCATGA+AGG + Chr3:74464956-74464975 MsG0380015737.01.T01:intron 30.0%
ATTGCAAAATGTAAGCCAAA+AGG - Chr3:74464038-74464057 None:intergenic 30.0%
ATTGTCAAAACAGAACTTTC+TGG - Chr3:74464574-74464593 None:intergenic 30.0%
CAAAAAAAATGAAGTAGCGA+GGG - Chr3:74463917-74463936 None:intergenic 30.0%
CAATTAGTCAATACATTGTG+AGG + Chr3:74467309-74467328 MsG0380015737.01.T01:three_prime_UTR 30.0%
CATATTTCAAGATTTGAAGG+TGG + Chr3:74462746-74462765 MsG0380015737.01.T01:CDS 30.0%
CGATTGAATATTGAGATAGA+TGG + Chr3:74461548-74461567 MsG0380015737.01.T01:intron 30.0%
CGTAACAAGAACAATACTTT+CGG - Chr3:74462396-74462415 None:intergenic 30.0%
GCCCAAGAAAATATGTTATT+GGG + Chr3:74464667-74464686 MsG0380015737.01.T01:three_prime_UTR 30.0%
GTAACAAGAACAATACTTTC+GGG - Chr3:74462395-74462414 None:intergenic 30.0%
TACAATTCCCATTCATCAAT+GGG - Chr3:74465920-74465939 None:intergenic 30.0%
TACATATGTCTATAAATGGC+TGG + Chr3:74462988-74463007 MsG0380015737.01.T01:three_prime_UTR 30.0%
TATGACAACATAAATCCTTC+TGG + Chr3:74465938-74465957 MsG0380015737.01.T01:three_prime_UTR 30.0%
TATGTTGATCCATATCCAAT+TGG + Chr3:74463310-74463329 MsG0380015737.01.T01:three_prime_UTR 30.0%
TCGACAACGATATTTGAATT+TGG - Chr3:74463364-74463383 None:intergenic 30.0%
TGGTAGACAAAGGTAAAAAA+GGG + Chr3:74464996-74465015 MsG0380015737.01.T01:intron 30.0%
TGTTATGTTTACAGATGGAA+GGG + Chr3:74462602-74462621 MsG0380015737.01.T01:intron 30.0%
TTCATCTGAGAAAAACTCAT+TGG - Chr3:74466034-74466053 None:intergenic 30.0%
TTGAAAGGCAATTAGAATCA+AGG + Chr3:74461772-74461791 MsG0380015737.01.T01:intron 30.0%
TTGGGATTACGCAAATTAAT+AGG - Chr3:74461802-74461821 None:intergenic 30.0%
TTGTTATGTTTACAGATGGA+AGG + Chr3:74462601-74462620 MsG0380015737.01.T01:intron 30.0%
! AAAAGATATGATCCTGCTTT+TGG + Chr3:74466108-74466127 MsG0380015737.01.T01:intron 30.0%
! ACTTCAAAAACCCTGAATTT+TGG - Chr3:74464120-74464139 None:intergenic 30.0%
! GATTCATCTCAGATTTTACA+AGG + Chr3:74463337-74463356 MsG0380015737.01.T01:three_prime_UTR 30.0%
! GGTTTGATAGATTTGATAAC+TGG + Chr3:74465429-74465448 MsG0380015737.01.T01:intron 30.0%
! TCAAGTCTTTAATTTAGCTC+TGG + Chr3:74464922-74464941 MsG0380015737.01.T01:intron 30.0%
!! AAAATTTTGATATAGCTGCC+TGG + Chr3:74465508-74465527 MsG0380015737.01.T01:intron 30.0%
!! GAAAAAATTATGATGATGGG+TGG + Chr3:74463816-74463835 MsG0380015737.01.T01:three_prime_UTR 30.0%
!! TGAAATAGTACTGACTTCAA+AGG - Chr3:74464240-74464259 None:intergenic 30.0%
!! TTATCTGAGATCTTTTAGTG+TGG + Chr3:74462417-74462436 MsG0380015737.01.T01:intron 30.0%
!!! CTCTTTTAGGGTATACTATA+TGG + Chr3:74460935-74460954 MsG0380015737.01.T01:intron 30.0%
!!! GTTATTATATTGCCGCTTTT+CGG + Chr3:74466587-74466606 MsG0380015737.01.T01:intron 30.0%
!!! TTTGTTTTGTTTTGTTTCCC+TGG - Chr3:74464015-74464034 None:intergenic 30.0%
AAACATACAACACACCTTCA+TGG - Chr3:74464973-74464992 None:intergenic 35.0%
AACAAATACCAGAGTAAGAC+AGG - Chr3:74463887-74463906 None:intergenic 35.0%
AACAAATATCCACCCTGAAT+TGG - Chr3:74461821-74461840 None:intergenic 35.0%
AACAACCTCTTCTGTAAAAC+AGG + Chr3:74466312-74466331 MsG0380015737.01.T01:intron 35.0%
AACACTATCTTCTTAAGAGC+AGG + Chr3:74460848-74460867 MsG0380015737.01.T01:five_prime_UTR 35.0%
AACATACAACTCACGTACTA+TGG + Chr3:74465335-74465354 MsG0380015737.01.T01:three_prime_UTR 35.0%
AAGCCATATTTCAAGCTCAA+AGG - Chr3:74463951-74463970 None:intergenic 35.0%
AATACTCCTACACTGAAACT+AGG - Chr3:74465849-74465868 None:intergenic 35.0%
AATCATATGCCAACAGTACA+GGG - Chr3:74460710-74460729 None:intergenic 35.0%
AATTCAGGGTGGATATTTGT+TGG + Chr3:74461820-74461839 MsG0380015737.01.T01:intron 35.0%
AATTTGCGTAATCCCAATTC+AGG + Chr3:74461805-74461824 MsG0380015737.01.T01:intron 35.0%
ACAAATATCCACCCTGAATT+GGG - Chr3:74461820-74461839 None:intergenic 35.0%
ACAACCTCTTCTGTAAAACA+GGG + Chr3:74466313-74466332 MsG0380015737.01.T01:intron 35.0%
ACAATTCCCATTCATCAATG+GGG - Chr3:74465919-74465938 None:intergenic 35.0%
ACTGCTCTGATATAGAACAT+CGG - Chr3:74461869-74461888 None:intergenic 35.0%
AGACAAGTAACAGATACCTT+TGG - Chr3:74465796-74465815 None:intergenic 35.0%
AGCCATATTTCAAGCTCAAA+GGG - Chr3:74463950-74463969 None:intergenic 35.0%
AGTAACACATGACCACAAAA+TGG - Chr3:74467472-74467491 None:intergenic 35.0%
AGTGAATCTTGACATCAACA+CGG - Chr3:74463395-74463414 None:intergenic 35.0%
ATAGTACGTGAGTTGTATGT+TGG - Chr3:74465336-74465355 None:intergenic 35.0%
ATATTGCTTCTTGGTATGAG+GGG + Chr3:74466225-74466244 MsG0380015737.01.T01:intron 35.0%
ATCACCACAATTTCAGCATT+GGG - Chr3:74467152-74467171 None:intergenic 35.0%
ATCACTGAGAGTTTATTCTG+TGG + Chr3:74466524-74466543 MsG0380015737.01.T01:intron 35.0%
ATCAGAAGTTGGATTGTGTT+TGG - Chr3:74465968-74465987 None:intergenic 35.0%
ATTCACATTTGGCACTATCT+CGG + Chr3:74465986-74466005 MsG0380015737.01.T01:three_prime_UTR 35.0%
ATTTCAAGATTTGAAGGTGG+TGG + Chr3:74462749-74462768 MsG0380015737.01.T01:CDS 35.0%
ATTTGCGTAATCCCAATTCA+GGG + Chr3:74461806-74461825 MsG0380015737.01.T01:intron 35.0%
CAAACTATATAACTCCTCCA+AGG - Chr3:74461704-74461723 None:intergenic 35.0%
CATACCACAAGAAGCAATAA+AGG - Chr3:74466416-74466435 None:intergenic 35.0%
CATGGGAATATCATTTGCAT+CGG - Chr3:74466085-74466104 None:intergenic 35.0%
CCCAATAAAGCCAAAATTCA+GGG + Chr3:74464107-74464126 MsG0380015737.01.T01:intron 35.0%
CTGGTGCATGAGTTATTATT+AGG + Chr3:74467396-74467415 MsG0380015737.01.T01:three_prime_UTR 35.0%
GAAATGGTTGACAGTGTATA+TGG + Chr3:74460631-74460650 MsG0380015737.01.T01:five_prime_UTR 35.0%
GAATCATCATCCAGAACAAT+TGG - Chr3:74465241-74465260 None:intergenic 35.0%
GAATCCTTACCAATTGGATA+TGG - Chr3:74463322-74463341 None:intergenic 35.0%
GATACTATTTCCTACCTCTA+TGG + Chr3:74463287-74463306 MsG0380015737.01.T01:three_prime_UTR 35.0%
GATGCAAATGATATTCCCAT+GGG + Chr3:74466084-74466103 MsG0380015737.01.T01:three_prime_UTR 35.0%
GCATAAGTAAGAACAAAGCA+TGG + Chr3:74461124-74461143 MsG0380015737.01.T01:five_prime_UTR 35.0%
GGAGTAATCACATCAAGTAA+GGG + Chr3:74461170-74461189 MsG0380015737.01.T01:five_prime_UTR 35.0%
GGCCCAAGAAAATATGTTAT+TGG + Chr3:74464666-74464685 MsG0380015737.01.T01:three_prime_UTR 35.0%
GTACATTTCTCAGTTATCTG+CGG + Chr3:74466490-74466509 MsG0380015737.01.T01:intron 35.0%
GTCTCCATTATGCAACTATT+CGG + Chr3:74465305-74465324 MsG0380015737.01.T01:three_prime_UTR 35.0%
GTGTAATGAAAATTTAGGGG+AGG + Chr3:74465729-74465748 MsG0380015737.01.T01:three_prime_UTR 35.0%
TAAGTAAGAACAAAGCATGG+TGG + Chr3:74461127-74461146 MsG0380015737.01.T01:five_prime_UTR 35.0%
TAGACAAAGGTAAAAAAGGG+TGG + Chr3:74464999-74465018 MsG0380015737.01.T01:intron 35.0%
TATACTTCAACCTTCATCCT+TGG + Chr3:74461684-74461703 MsG0380015737.01.T01:intron 35.0%
TATGCCTCGTTGTTTACAAA+AGG + Chr3:74464459-74464478 MsG0380015737.01.T01:intron 35.0%
TATGGATCAACATACCATAG+AGG - Chr3:74463304-74463323 None:intergenic 35.0%
TATGTTTGGATGGTAGACAA+AGG + Chr3:74464986-74465005 MsG0380015737.01.T01:intron 35.0%
TCCAACTTCTGATTCACATT+TGG + Chr3:74465975-74465994 MsG0380015737.01.T01:three_prime_UTR 35.0%
TCGAAGACAATTTACAACCT+GGG + Chr3:74461329-74461348 MsG0380015737.01.T01:CDS 35.0%
TCTTCCGAATAGTTGCATAA+TGG - Chr3:74465312-74465331 None:intergenic 35.0%
TCTTCTTCATCGTAAGACAA+TGG - Chr3:74463795-74463814 None:intergenic 35.0%
TCTTGAAATATGTTGCCTAC+AGG - Chr3:74462738-74462757 None:intergenic 35.0%
TGACAACATAAATCCTTCTG+GGG + Chr3:74465940-74465959 MsG0380015737.01.T01:three_prime_UTR 35.0%
TGAGATGAATCCTTACCAAT+TGG - Chr3:74463328-74463347 None:intergenic 35.0%
TGATCCATATCCAATTGGTA+AGG + Chr3:74463315-74463334 MsG0380015737.01.T01:three_prime_UTR 35.0%
TGATGATTGGAAAGAAGATG+TGG + Chr3:74460659-74460678 MsG0380015737.01.T01:five_prime_UTR 35.0%
TGGAGTAATCACATCAAGTA+AGG + Chr3:74461169-74461188 MsG0380015737.01.T01:five_prime_UTR 35.0%
TGTATGTATAATGCAGTCCA+TGG + Chr3:74463675-74463694 MsG0380015737.01.T01:three_prime_UTR 35.0%
TGTTCAAGAGAGAAGTAACA+AGG + Chr3:74467230-74467249 MsG0380015737.01.T01:three_prime_UTR 35.0%
TTAATAAAAAGGCGAGCATG+AGG + Chr3:74465551-74465570 MsG0380015737.01.T01:intron 35.0%
TTCCCTTTGAGCTTGAAATA+TGG + Chr3:74463945-74463964 MsG0380015737.01.T01:intron 35.0%
TTCGTTGTTGTGTTATGGTA+TGG + Chr3:74461467-74461486 MsG0380015737.01.T01:intron 35.0%
TTGAATTTAGTCCTTGTTCC+AGG + Chr3:74462228-74462247 MsG0380015737.01.T01:intron 35.0%
TTTGATGTCAAATCACATCC+AGG - Chr3:74465283-74465302 None:intergenic 35.0%
! AAGCAGAAACTGAAAAGCAT+AGG - Chr3:74463982-74464001 None:intergenic 35.0%
! ACAACCTTTTGTAAACAACG+AGG - Chr3:74464466-74464485 None:intergenic 35.0%
! AGCAGAAACTGAAAAGCATA+GGG - Chr3:74463981-74464000 None:intergenic 35.0%
! AGGATCATATCTTTTTCCCA+TGG - Chr3:74466103-74466122 None:intergenic 35.0%
! ATGAAGGTGTGTTGTATGTT+TGG + Chr3:74464972-74464991 MsG0380015737.01.T01:intron 35.0%
! GGAATCTGAAATCCTGATTT+CGG + Chr3:74462869-74462888 MsG0380015737.01.T01:three_prime_UTR 35.0%
! GGATCATATCTTTTTCCCAT+GGG - Chr3:74466102-74466121 None:intergenic 35.0%
! GTTACTTTAAAAGATACGGG+AGG + Chr3:74466645-74466664 MsG0380015737.01.T01:intron 35.0%
! TGAAGCTTTTCATCTTAGCA+TGG + Chr3:74462179-74462198 MsG0380015737.01.T01:intron 35.0%
!! CTAGTGGATTCACTAATCTA+TGG + Chr3:74462462-74462481 MsG0380015737.01.T01:intron 35.0%
!! GTTGGTTTGAAGATGTGATA+TGG + Chr3:74461838-74461857 MsG0380015737.01.T01:intron 35.0%
!! TAGTACTGACTTCAAAGGAA+CGG - Chr3:74464235-74464254 None:intergenic 35.0%
!!! ACCCTGAATTTTGGCTTTAT+TGG - Chr3:74464111-74464130 None:intergenic 35.0%
!!! CCCTGAATTTTGGCTTTATT+GGG - Chr3:74464110-74464129 None:intergenic 35.0%
!!! GGAAATTAGGGTTTTGGAAT+TGG - Chr3:74460821-74460840 None:intergenic 35.0%
!!! TTCTGTTTTAGTGGACTTGA+TGG - Chr3:74462361-74462380 None:intergenic 35.0%
AAATCTCACCTGTCTTACTC+TGG + Chr3:74463876-74463895 MsG0380015737.01.T01:three_prime_UTR 40.0%
AACACAGATAGAGAACAGGA+CGG - Chr3:74460798-74460817 None:intergenic 40.0%
AACACCTGGAACACATTCAT+TGG - Chr3:74464194-74464213 None:intergenic 40.0%
AACACTTGAGGTCATTGAGA+AGG + Chr3:74464631-74464650 MsG0380015737.01.T01:three_prime_UTR 40.0%
AATTGTCTTCGAGCAACTGA+AGG - Chr3:74461321-74461340 None:intergenic 40.0%
ACAGATACCTTTGGCAAGAT+TGG - Chr3:74465787-74465806 None:intergenic 40.0%
ACATAGCCTAGTTTCAGTGT+AGG + Chr3:74465840-74465859 MsG0380015737.01.T01:intron 40.0%
ACCACCAACATGAACAGAAA+GGG - Chr3:74462127-74462146 None:intergenic 40.0%
ACCTTCTGTTCGGTTCAAAA+TGG - Chr3:74465203-74465222 None:intergenic 40.0%
AGGTGTGTTGTATGTTTGGA+TGG + Chr3:74464976-74464995 MsG0380015737.01.T01:intron 40.0%
AGTCCTTGTTCCAGGTATAA+GGG + Chr3:74462236-74462255 MsG0380015737.01.T01:intron 40.0%
ATAGCTAGCAAATGGATGGT+TGG + Chr3:74467444-74467463 MsG0380015737.01.T01:three_prime_UTR 40.0%
ATGCTGACAGTTCTTCTTCT+GGG + Chr3:74464700-74464719 MsG0380015737.01.T01:three_prime_UTR 40.0%
ATGTTTACAGATGGAAGGGA+AGG + Chr3:74462606-74462625 MsG0380015737.01.T01:intron 40.0%
CAAAACCCTAATTTCCTCAC+GGG + Chr3:74460825-74460844 MsG0380015737.01.T01:five_prime_UTR 40.0%
CAAGTAAGGGTCTCAAGTAA+TGG + Chr3:74461183-74461202 MsG0380015737.01.T01:exon 40.0%
CAATGCTGAAATTGTGGTGA+TGG + Chr3:74467151-74467170 MsG0380015737.01.T01:intron 40.0%
CAGATACCTTTGGCAAGATT+GGG - Chr3:74465786-74465805 None:intergenic 40.0%
CATCACCACAATTTCAGCAT+TGG - Chr3:74467153-74467172 None:intergenic 40.0%
CATCCAGGACACTTTATGAT+TGG - Chr3:74465268-74465287 None:intergenic 40.0%
CCAAAACCCTAATTTCCTCA+CGG + Chr3:74460824-74460843 MsG0380015737.01.T01:five_prime_UTR 40.0%
CCTTTCAACAAACACAGTCA+TGG - Chr3:74461760-74461779 None:intergenic 40.0%
CGATGCAAATGATATTCCCA+TGG + Chr3:74466083-74466102 MsG0380015737.01.T01:three_prime_UTR 40.0%
CTATTTCACAAAGGCCTTCT+TGG + Chr3:74464252-74464271 MsG0380015737.01.T01:intron 40.0%
CTCGAAGACAATTTACAACC+TGG + Chr3:74461328-74461347 MsG0380015737.01.T01:CDS 40.0%
CTCTTCTGTAAAACAGGGTA+AGG + Chr3:74466318-74466337 MsG0380015737.01.T01:intron 40.0%
CTGATATCGATGAACACTTG+AGG + Chr3:74464619-74464638 MsG0380015737.01.T01:three_prime_UTR 40.0%
GAATCATATGCCAACAGTAC+AGG - Chr3:74460711-74460730 None:intergenic 40.0%
GAGAAAAACTCATTGGAGCT+TGG - Chr3:74466027-74466046 None:intergenic 40.0%
GATCAACATACCATAGAGGT+AGG - Chr3:74463300-74463319 None:intergenic 40.0%
GCATCATATGGAGCAAATTC+TGG - Chr3:74462636-74462655 None:intergenic 40.0%
GCCAAATGTGAATCAGAAGT+TGG - Chr3:74465979-74465998 None:intergenic 40.0%
GCCCAATAAAGCCAAAATTC+AGG + Chr3:74464106-74464125 MsG0380015737.01.T01:intron 40.0%
GCTATTGGATAGCTAGCAAA+TGG + Chr3:74467436-74467455 MsG0380015737.01.T01:three_prime_UTR 40.0%
GTCTATAAATGGCTGGAACT+TGG + Chr3:74462995-74463014 MsG0380015737.01.T01:three_prime_UTR 40.0%
GTTCTTACTTATGCCACTCA+CGG - Chr3:74461118-74461137 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG + Chr3:74466269-74466288 MsG0380015737.01.T01:intron 40.0%
TAATCATTGTTCTCTGCCTG+CGG + Chr3:74461920-74461939 MsG0380015737.01.T01:intron 40.0%
TACCACCAACATGAACAGAA+AGG - Chr3:74462128-74462147 None:intergenic 40.0%
TAGAAATGACCCTGTACTGT+TGG + Chr3:74460698-74460717 MsG0380015737.01.T01:five_prime_UTR 40.0%
TAGTCCTTGTTCCAGGTATA+AGG + Chr3:74462235-74462254 MsG0380015737.01.T01:intron 40.0%
TATAACTCCTCCAAGGATGA+AGG - Chr3:74461697-74461716 None:intergenic 40.0%
TCTCTTGAACATCCTCTTCA+TGG - Chr3:74467221-74467240 None:intergenic 40.0%
TGACTGTTAATGTGGTGTGA+TGG + Chr3:74466804-74466823 MsG0380015737.01.T01:intron 40.0%
TTACTGCACTGCTTAGTCAA+TGG + Chr3:74461380-74461399 MsG0380015737.01.T01:intron 40.0%
TTCACATTTGGCACTATCTC+GGG + Chr3:74465987-74466006 MsG0380015737.01.T01:three_prime_UTR 40.0%
TTGCCCTTTATTGCTTCTTG+TGG + Chr3:74466409-74466428 MsG0380015737.01.T01:intron 40.0%
TTGGAACACAGATAGAGAAC+AGG - Chr3:74460802-74460821 None:intergenic 40.0%
TTGGATAGCTAGCAAATGGA+TGG + Chr3:74467440-74467459 MsG0380015737.01.T01:three_prime_UTR 40.0%
TTGTACAGATGAAGAACACC+TGG - Chr3:74464208-74464227 None:intergenic 40.0%
TTGTCTTTGTCCCTTATACC+TGG - Chr3:74462249-74462268 None:intergenic 40.0%
TTTCAAGCTCAAAGGGAAGA+TGG - Chr3:74463943-74463962 None:intergenic 40.0%
TTTGCAAGGGAAACCAATTC+AGG - Chr3:74462057-74462076 None:intergenic 40.0%
! AGACTGAAGTACCTTCTGTT+CGG - Chr3:74465213-74465232 None:intergenic 40.0%
! CCATGACTGTGTTTGTTGAA+AGG + Chr3:74461757-74461776 MsG0380015737.01.T01:intron 40.0%
! CTTACCCTGTTTTACAGAAG+AGG - Chr3:74466320-74466339 None:intergenic 40.0%
! GATGTGGAAAGTGTGAGAAA+AGG + Chr3:74460675-74460694 MsG0380015737.01.T01:five_prime_UTR 40.0%
! TCCATTTTGAACCGAACAGA+AGG + Chr3:74465199-74465218 MsG0380015737.01.T01:intron 40.0%
! TCTGAAATCCTGATTTCGGA+AGG + Chr3:74462873-74462892 MsG0380015737.01.T01:three_prime_UTR 40.0%
! TCTTCTTCTGGGGATGAAAA+AGG + Chr3:74464711-74464730 MsG0380015737.01.T01:three_prime_UTR 40.0%
! TTACAGAAGAGGTTGTTTCC+AGG - Chr3:74466309-74466328 None:intergenic 40.0%
!! GATTAGCCTTAAAGCCAAGA+AGG - Chr3:74464269-74464288 None:intergenic 40.0%
!! GTGGTGGATAAGAATTCTGA+TGG + Chr3:74462765-74462784 MsG0380015737.01.T01:CDS 40.0%
!! TACAGCATTGGCTTGTATTC+TGG + Chr3:74467377-74467396 MsG0380015737.01.T01:three_prime_UTR 40.0%
!! TTTTATGTTTGCAGCTCTGG+CGG + Chr3:74467174-74467193 MsG0380015737.01.T01:intron 40.0%
!!! TGGTTTTATGTTTGCAGCTC+TGG + Chr3:74467171-74467190 MsG0380015737.01.T01:intron 40.0%
!!! TGTTTTGTTTCCCTGGACTA+GGG - Chr3:74464008-74464027 None:intergenic 40.0%
!!! TTGTTTTGTTTCCCTGGACT+AGG - Chr3:74464009-74464028 None:intergenic 40.0%
AAGAAGATAGTGTTCCCGTG+AGG - Chr3:74460842-74460861 None:intergenic 45.0%
AAGCTTCCCAATCTTGCCAA+AGG + Chr3:74465777-74465796 MsG0380015737.01.T01:three_prime_UTR 45.0%
AATACCAGAGCCAATGTCGA+GGG - Chr3:74461362-74461381 None:intergenic 45.0%
ACTTCAACCTTCATCCTTGG+AGG + Chr3:74461687-74461706 MsG0380015737.01.T01:intron 45.0%
AGAAGCAATAAAGGGCAACC+CGG - Chr3:74466407-74466426 None:intergenic 45.0%
AGTGTTCCCGTGAGGAAATT+AGG - Chr3:74460834-74460853 None:intergenic 45.0%
ATACCCTGTTCCTGCAAACA+CGG - Chr3:74461971-74461990 None:intergenic 45.0%
ATCATAGGGTGATGATCCAC+TGG - Chr3:74461236-74461255 None:intergenic 45.0%
ATGCATGTGAGGTGCAGATA+TGG - Chr3:74461290-74461309 None:intergenic 45.0%
ATTCTCCACGGGTTCGAAAT+GGG - Chr3:74465890-74465909 None:intergenic 45.0%
ATTTCGAACCCGTGGAGAAT+GGG + Chr3:74465890-74465909 MsG0380015737.01.T01:three_prime_UTR 45.0%
CACACGTGACATTCTAACCA+TGG - Chr3:74463695-74463714 None:intergenic 45.0%
CATCTTCAACAACTCCTACG+AGG + Chr3:74464546-74464565 MsG0380015737.01.T01:three_prime_UTR 45.0%
CCAACGTGAATGGCATCATA+TGG - Chr3:74462648-74462667 None:intergenic 45.0%
CCAGGACACTTTATGATTGG+TGG - Chr3:74465265-74465284 None:intergenic 45.0%
CCATATGATGCCATTCACGT+TGG + Chr3:74462645-74462664 MsG0380015737.01.T01:CDS 45.0%
CCTGCAAACACGGACAAAAA+AGG - Chr3:74461961-74461980 None:intergenic 45.0%
CGTGGAGCATATTCCTGAAT+TGG + Chr3:74462041-74462060 MsG0380015737.01.T01:CDS 45.0%
CTGTTAATGTGGTGTGATGG+TGG + Chr3:74466807-74466826 MsG0380015737.01.T01:intron 45.0%
GATGCTGACAGTTCTTCTTC+TGG + Chr3:74464699-74464718 MsG0380015737.01.T01:three_prime_UTR 45.0%
GCAAACACGGACAAAAAAGG+TGG - Chr3:74461958-74461977 None:intergenic 45.0%
GCAGCTACACAATTGCAAGA+TGG + Chr3:74462099-74462118 MsG0380015737.01.T01:CDS 45.0%
GCGTACAATACACCAATGGT+GGG + Chr3:74466343-74466362 MsG0380015737.01.T01:intron 45.0%
GGAACTTGAATGCACACACT+TGG + Chr3:74462920-74462939 MsG0380015737.01.T01:three_prime_UTR 45.0%
GGATGTAAGCACATGCTGTT+AGG + Chr3:74463016-74463035 MsG0380015737.01.T01:three_prime_UTR 45.0%
GGCATTAACCTTCCGAAATC+AGG - Chr3:74462884-74462903 None:intergenic 45.0%
GGTTCCCTTTCTGTTCATGT+TGG + Chr3:74462120-74462139 MsG0380015737.01.T01:CDS 45.0%
GTCATGTGACTGAAAGGTCA+CGG + Chr3:74466275-74466294 MsG0380015737.01.T01:intron 45.0%
GTGGAAACTATAAACACCGC+AGG - Chr3:74461939-74461958 None:intergenic 45.0%
GTGTTCCCGTGAGGAAATTA+GGG - Chr3:74460833-74460852 None:intergenic 45.0%
TAATACCAGAGCCAATGTCG+AGG - Chr3:74461363-74461382 None:intergenic 45.0%
TATGGTGGCATTGTAGCCTA+TGG - Chr3:74461272-74461291 None:intergenic 45.0%
TCAGAACAGTGCACTATACC+AGG - Chr3:74465529-74465548 None:intergenic 45.0%
TCAGTTATCTGCGGATCTAC+AGG + Chr3:74466499-74466518 MsG0380015737.01.T01:intron 45.0%
TCATAGGGTGATGATCCACT+GGG - Chr3:74461235-74461254 None:intergenic 45.0%
TCATGTGACTGAAAGGTCAC+GGG + Chr3:74466276-74466295 MsG0380015737.01.T01:intron 45.0%
TCCCTTTCTGTTCATGTTGG+TGG + Chr3:74462123-74462142 MsG0380015737.01.T01:CDS 45.0%
TCGACCAATGAATGTGTTCC+AGG + Chr3:74464187-74464206 MsG0380015737.01.T01:intron 45.0%
TGCGTACAATACACCAATGG+TGG + Chr3:74466342-74466361 MsG0380015737.01.T01:intron 45.0%
TGCTGACAGTTCTTCTTCTG+GGG + Chr3:74464701-74464720 MsG0380015737.01.T01:three_prime_UTR 45.0%
TGTCCCTTATACCTGGAACA+AGG - Chr3:74462242-74462261 None:intergenic 45.0%
TTACAGATGGAAGGGAAGGT+TGG + Chr3:74462610-74462629 MsG0380015737.01.T01:intron 45.0%
TTGAACATCCTCTTCATGGC+CGG - Chr3:74467217-74467236 None:intergenic 45.0%
TTGAGCTTCTCGACTAGTGA+GGG - Chr3:74462832-74462851 None:intergenic 45.0%
TTTCGGAAGGTTAATGCCTC+AGG + Chr3:74462886-74462905 MsG0380015737.01.T01:three_prime_UTR 45.0%
! AACAAAGCATGGTGGAGATG+AGG + Chr3:74461135-74461154 MsG0380015737.01.T01:five_prime_UTR 45.0%
! ATTGTGTTTGGTTCCCCAGA+AGG - Chr3:74465956-74465975 None:intergenic 45.0%
! ATTTGCATCGGTAACGTCTG+AGG - Chr3:74466073-74466092 None:intergenic 45.0%
! ATTTTCTTGGGCCACGAGTT+CGG - Chr3:74464659-74464678 None:intergenic 45.0%
! CCACCAATCATAAAGTGTCC+TGG + Chr3:74465262-74465281 MsG0380015737.01.T01:three_prime_UTR 45.0%
! CCGTGAGGAAATTAGGGTTT+TGG - Chr3:74460827-74460846 None:intergenic 45.0%
! GAGATGAGGTTGCAGCATTT+TGG + Chr3:74461149-74461168 MsG0380015737.01.T01:five_prime_UTR 45.0%
! TTTCAGCATTGGGCGTGTTT+AGG - Chr3:74467142-74467161 None:intergenic 45.0%
!! CAAAGGCCTTCTTGGCTTTA+AGG + Chr3:74464260-74464279 MsG0380015737.01.T01:intron 45.0%
!!! CCTTTTTTGTCCGTGTTTGC+AGG + Chr3:74461958-74461977 MsG0380015737.01.T01:intron 45.0%
!!! GTTTTGTTTCCCTGGACTAG+GGG - Chr3:74464007-74464026 None:intergenic 45.0%
ACAACTTACCAGTTGCGCCA+AGG - Chr3:74466254-74466273 None:intergenic 50.0%
ACAGATAGAGAACAGGACGG+TGG - Chr3:74460795-74460814 None:intergenic 50.0%
ACCCTATGATGATAGCCCCA+TGG + Chr3:74461246-74461265 MsG0380015737.01.T01:CDS 50.0%
AGCATAACAAGACACGCGGA+GGG - Chr3:74460733-74460752 None:intergenic 50.0%
AGTCGAGAAGCTCAACTTCG+CGG + Chr3:74462837-74462856 MsG0380015737.01.T01:CDS 50.0%
ATGAGCGGTTGGGGAATTTC+TGG - Chr3:74462681-74462700 None:intergenic 50.0%
ATGCCTCAGGTGTCAGTGTT+TGG + Chr3:74462899-74462918 MsG0380015737.01.T01:three_prime_UTR 50.0%
ATTTAGGGGAGGATGCAACC+AGG + Chr3:74465740-74465759 MsG0380015737.01.T01:three_prime_UTR 50.0%
CACGCCCAATGCTGAAATTG+TGG + Chr3:74467145-74467164 MsG0380015737.01.T01:intron 50.0%
CATAGGGTGATGATCCACTG+GGG - Chr3:74461234-74461253 None:intergenic 50.0%
CATGTGAGGTGCAGATATGG+TGG - Chr3:74461287-74461306 None:intergenic 50.0%
CATTCTCCACGGGTTCGAAA+TGG - Chr3:74465891-74465910 None:intergenic 50.0%
CATTGTAGCCTATGGCCATG+GGG - Chr3:74461264-74461283 None:intergenic 50.0%
CATTTCGAACCCGTGGAGAA+TGG + Chr3:74465889-74465908 MsG0380015737.01.T01:three_prime_UTR 50.0%
CTGCAGCATAACAAGACACG+CGG - Chr3:74460737-74460756 None:intergenic 50.0%
CTTGGTATGAGGGGTAACCT+TGG + Chr3:74466234-74466253 MsG0380015737.01.T01:intron 50.0%
GACAATGACGAACTGCACAG+AGG + Chr3:74464505-74464524 MsG0380015737.01.T01:intron 50.0%
GCATTGTAGCCTATGGCCAT+GGG - Chr3:74461265-74461284 None:intergenic 50.0%
GCCATGGGGCTATCATCATA+GGG - Chr3:74461250-74461269 None:intergenic 50.0%
GGCTGCGTACAATACACCAA+TGG + Chr3:74466339-74466358 MsG0380015737.01.T01:intron 50.0%
GGGAGAATGGTGATTCCTGT+AGG + Chr3:74462720-74462739 MsG0380015737.01.T01:CDS 50.0%
GGGTGTCCCCATTGATGAAT+GGG + Chr3:74465910-74465929 MsG0380015737.01.T01:three_prime_UTR 50.0%
GTTCCAAACACTGACACCTG+AGG - Chr3:74462905-74462924 None:intergenic 50.0%
GTTGAGCTTCTCGACTAGTG+AGG - Chr3:74462833-74462852 None:intergenic 50.0%
TCAACTTCGCGGCTACTAAG+AGG + Chr3:74462848-74462867 MsG0380015737.01.T01:exon 50.0%
TGAGCTTCTCGACTAGTGAG+GGG - Chr3:74462831-74462850 None:intergenic 50.0%
TGATGCCATTCACGTTGGAG+CGG + Chr3:74462650-74462669 MsG0380015737.01.T01:CDS 50.0%
TGCGTAATCCCAATTCAGGG+TGG + Chr3:74461809-74461828 MsG0380015737.01.T01:intron 50.0%
TGGGTGTCCCCATTGATGAA+TGG + Chr3:74465909-74465928 MsG0380015737.01.T01:three_prime_UTR 50.0%
TGTCCGTGTTTGCAGGAACA+GGG + Chr3:74461965-74461984 MsG0380015737.01.T01:intron 50.0%
TTGAGAAGGATCCGAACTCG+TGG + Chr3:74464645-74464664 MsG0380015737.01.T01:three_prime_UTR 50.0%
TTGTCCGTGTTTGCAGGAAC+AGG + Chr3:74461964-74461983 MsG0380015737.01.T01:intron 50.0%
! AACGTCTGAGGCATCACTGA+TGG - Chr3:74466061-74466080 None:intergenic 50.0%
! AGAACTTTCTGGCACCTCGT+AGG - Chr3:74464563-74464582 None:intergenic 50.0%
! AGTGAGGGGCACATAACGAA+CGG - Chr3:74462817-74462836 None:intergenic 50.0%
! CTGATGGTTCTATCAGCGTC+CGG + Chr3:74462781-74462800 MsG0380015737.01.T01:CDS 50.0%
! GACTGCGTGTTTTGCGTTGA+TGG + Chr3:74461993-74462012 MsG0380015737.01.T01:CDS 50.0%
!! AGAGCTTTGTTTGTCCCCAG+TGG + Chr3:74461217-74461236 MsG0380015737.01.T01:CDS 50.0%
!! GATGATGGGTGGTGCATGTA+TGG + Chr3:74463827-74463846 MsG0380015737.01.T01:three_prime_UTR 50.0%
!! GGATGGTTGGCTCCATTTTG+TGG + Chr3:74467457-74467476 MsG0380015737.01.T01:three_prime_UTR 50.0%
!! TCTGCTTTTCCCCTAGTCCA+GGG + Chr3:74463995-74464014 MsG0380015737.01.T01:intron 50.0%
!! TTCTGCTTTTCCCCTAGTCC+AGG + Chr3:74463994-74464013 MsG0380015737.01.T01:intron 50.0%
!!! GCGTGTTTTGCGTTGATGGT+TGG + Chr3:74461997-74462016 MsG0380015737.01.T01:CDS 50.0%
AACGAACGGAGGTCTCAGTC+CGG - Chr3:74462803-74462822 None:intergenic 55.0%
AACTGGTCGATGAGCGGTTG+GGG - Chr3:74462690-74462709 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + Chr3:74466288-74466307 MsG0380015737.01.T01:intron 55.0%
ACTAGAGCTCCCGCATATGC+AGG - Chr3:74466382-74466401 None:intergenic 55.0%
AGGCAGGTAGCATGCATGTG+AGG - Chr3:74461301-74461320 None:intergenic 55.0%
ATCGACCAGTTGAAGCCTGG+TGG + Chr3:74462699-74462718 MsG0380015737.01.T01:CDS 55.0%
ATGGGGACACCCATTCTCCA+CGG - Chr3:74465902-74465921 None:intergenic 55.0%
CAACTGGTCGATGAGCGGTT+GGG - Chr3:74462691-74462710 None:intergenic 55.0%
CAGAGATTCTGCTCCGTGAG+TGG + Chr3:74461102-74461121 MsG0380015737.01.T01:intron 55.0%
CAGCATAACAAGACACGCGG+AGG - Chr3:74460734-74460753 None:intergenic 55.0%
CCTTCCTGGACCTGCATATG+CGG + Chr3:74466369-74466388 MsG0380015737.01.T01:intron 55.0%
CGCATATGCAGGTCCAGGAA+GGG - Chr3:74466371-74466390 None:intergenic 55.0%
CTCATCGACCAGTTGAAGCC+TGG + Chr3:74462696-74462715 MsG0380015737.01.T01:CDS 55.0%
CTTCCTGGACCTGCATATGC+GGG + Chr3:74466370-74466389 MsG0380015737.01.T01:intron 55.0%
GATGATAGCCCCATGGCCAT+AGG + Chr3:74461253-74461272 MsG0380015737.01.T01:CDS 55.0%
GCATATGCAGGTCCAGGAAG+GGG - Chr3:74466370-74466389 None:intergenic 55.0%
GCTTAAACTCTGCCCCATCC+TGG - Chr3:74465761-74465780 None:intergenic 55.0%
GGAATCACCATTCTCCCACC+AGG - Chr3:74462717-74462736 None:intergenic 55.0%
GGCATTGTAGCCTATGGCCA+TGG - Chr3:74461266-74461285 None:intergenic 55.0%
GGCCATGGGGCTATCATCAT+AGG - Chr3:74461251-74461270 None:intergenic 55.0%
GGCTTCAACTGGTCGATGAG+CGG - Chr3:74462696-74462715 None:intergenic 55.0%
GTCTTCGAGCAACTGAAGGC+AGG - Chr3:74461317-74461336 None:intergenic 55.0%
GTTGAAGCCTGGTGGGAGAA+TGG + Chr3:74462707-74462726 MsG0380015737.01.T01:CDS 55.0%
TCAACTGGTCGATGAGCGGT+TGG - Chr3:74462692-74462711 None:intergenic 55.0%
TCGACCAGTTGAAGCCTGGT+GGG + Chr3:74462700-74462719 MsG0380015737.01.T01:CDS 55.0%
TTCAGCCCATTTCGAACCCG+TGG + Chr3:74465882-74465901 MsG0380015737.01.T01:three_prime_UTR 55.0%
TTCTCCCACCAGGCTTCAAC+TGG - Chr3:74462707-74462726 None:intergenic 55.0%
! AGAACAGGACGGTGGTTCTG+AGG - Chr3:74460787-74460806 None:intergenic 55.0%
! TATGCGGGAGCTCTAGTGAC+CGG + Chr3:74466385-74466404 MsG0380015737.01.T01:intron 55.0%
!! GAACAGGACGGTGGTTCTGA+GGG - Chr3:74460786-74460805 None:intergenic 55.0%
!! GGAGCAGAAGTAGCGGATAC+CGG + Chr3:74467195-74467214 MsG0380015737.01.T01:three_prime_UTR 55.0%
ACGCCAACAGCACAGCCTTG+GGG - Chr3:74462024-74462043 None:intergenic 60.0%
AGCGGATACCGGCCATGAAG+AGG + Chr3:74467206-74467225 MsG0380015737.01.T01:three_prime_UTR 60.0%
AGGGGAGGATGCAACCAGGA+TGG + Chr3:74465744-74465763 MsG0380015737.01.T01:three_prime_UTR 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + Chr3:74466243-74466262 MsG0380015737.01.T01:intron 60.0%
CACGCCAACAGCACAGCCTT+GGG - Chr3:74462025-74462044 None:intergenic 60.0%
CCGCATATGCAGGTCCAGGA+AGG - Chr3:74466372-74466391 None:intergenic 60.0%
CTCTGGCGGAGCAGAAGTAG+CGG + Chr3:74467188-74467207 MsG0380015737.01.T01:three_prime_UTR 60.0%
GGGAGGATGCAACCAGGATG+GGG + Chr3:74465746-74465765 MsG0380015737.01.T01:three_prime_UTR 60.0%
GGGGAGGATGCAACCAGGAT+GGG + Chr3:74465745-74465764 MsG0380015737.01.T01:three_prime_UTR 60.0%
TGCTGCCGCTCCAACGTGAA+TGG - Chr3:74462658-74462677 None:intergenic 60.0%
TGGGGACACCCATTCTCCAC+GGG - Chr3:74465901-74465920 None:intergenic 60.0%
! ATGCGGGAGCTCTAGTGACC+GGG + Chr3:74466386-74466405 MsG0380015737.01.T01:intron 60.0%
! GAGGGGCACATAACGAACGG+AGG - Chr3:74462814-74462833 None:intergenic 60.0%
!! AGGACGGTGGTTCTGAGGGA+AGG - Chr3:74460782-74460801 None:intergenic 60.0%
!! GCGTTGATGGTTGGACCCCA+AGG + Chr3:74462006-74462025 MsG0380015737.01.T01:CDS 60.0%
CCACGCCAACAGCACAGCCT+TGG - Chr3:74462026-74462045 None:intergenic 65.0%
CCAGGAAGGGGTCCCACCAT+TGG - Chr3:74466358-74466377 None:intergenic 65.0%
GCTCCCGCATATGCAGGTCC+AGG - Chr3:74466376-74466395 None:intergenic 65.0%
GGACCCCAAGGCTGTGCTGT+TGG + Chr3:74462018-74462037 MsG0380015737.01.T01:CDS 65.0%
GGGATGCACGCCCTCGACAT+TGG + Chr3:74461349-74461368 MsG0380015737.01.T01:CDS 65.0%
! ATGTCGAGGGCGTGCATCCC+AGG - Chr3:74461349-74461368 None:intergenic 65.0%
! CCAAGGCTGTGCTGTTGGCG+TGG + Chr3:74462023-74462042 MsG0380015737.01.T01:CDS 65.0%
! CCAATGGTGGGACCCCTTCC+TGG + Chr3:74466355-74466374 MsG0380015737.01.T01:intron 65.0%
!! CACGCCCTCGACATTGGCTC+TGG + Chr3:74461355-74461374 MsG0380015737.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 74460614 74467535 74460614 ID=MsG0380015737.01;Name=MsG0380015737.01
Chr3 mRNA 74460614 74467535 74460614 ID=MsG0380015737.01.T01;Parent=MsG0380015737.01;Name=MsG0380015737.01.T01;_AED=0.14;_eAED=0.14;_QI=353|1|1|1|0.25|0.11|9|2039|196
Chr3 exon 74460614 74460869 74460614 ID=MsG0380015737.01.T01:exon:14293;Parent=MsG0380015737.01.T01
Chr3 exon 74461105 74461376 74461105 ID=MsG0380015737.01.T01:exon:14294;Parent=MsG0380015737.01.T01
Chr3 exon 74461980 74462144 74461980 ID=MsG0380015737.01.T01:exon:14295;Parent=MsG0380015737.01.T01
Chr3 exon 74462616 74463897 74462616 ID=MsG0380015737.01.T01:exon:14296;Parent=MsG0380015737.01.T01
Chr3 exon 74464525 74464732 74464525 ID=MsG0380015737.01.T01:exon:14297;Parent=MsG0380015737.01.T01
Chr3 exon 74465218 74465356 74465218 ID=MsG0380015737.01.T01:exon:14298;Parent=MsG0380015737.01.T01
Chr3 exon 74465718 74465798 74465718 ID=MsG0380015737.01.T01:exon:14299;Parent=MsG0380015737.01.T01
Chr3 exon 74465881 74466112 74465881 ID=MsG0380015737.01.T01:exon:14300;Parent=MsG0380015737.01.T01
Chr3 exon 74467188 74467535 74467188 ID=MsG0380015737.01.T01:exon:14301;Parent=MsG0380015737.01.T01
Chr3 five_prime_UTR 74460614 74460869 74460614 ID=MsG0380015737.01.T01:five_prime_utr;Parent=MsG0380015737.01.T01
Chr3 five_prime_UTR 74461105 74461201 74461105 ID=MsG0380015737.01.T01:five_prime_utr;Parent=MsG0380015737.01.T01
Chr3 CDS 74461202 74461376 74461202 ID=MsG0380015737.01.T01:cds;Parent=MsG0380015737.01.T01
Chr3 CDS 74461980 74462144 74461980 ID=MsG0380015737.01.T01:cds;Parent=MsG0380015737.01.T01
Chr3 CDS 74462616 74462866 74462616 ID=MsG0380015737.01.T01:cds;Parent=MsG0380015737.01.T01
Chr3 three_prime_UTR 74462867 74463897 74462867 ID=MsG0380015737.01.T01:three_prime_utr;Parent=MsG0380015737.01.T01
Chr3 three_prime_UTR 74464525 74464732 74464525 ID=MsG0380015737.01.T01:three_prime_utr;Parent=MsG0380015737.01.T01
Chr3 three_prime_UTR 74465218 74465356 74465218 ID=MsG0380015737.01.T01:three_prime_utr;Parent=MsG0380015737.01.T01
Chr3 three_prime_UTR 74465718 74465798 74465718 ID=MsG0380015737.01.T01:three_prime_utr;Parent=MsG0380015737.01.T01
Chr3 three_prime_UTR 74465881 74466112 74465881 ID=MsG0380015737.01.T01:three_prime_utr;Parent=MsG0380015737.01.T01
Chr3 three_prime_UTR 74467188 74467535 74467188 ID=MsG0380015737.01.T01:three_prime_utr;Parent=MsG0380015737.01.T01
Gene Sequence

>MsG0380015737.01.T01

ATGGAGACTGTTGACAGAGCTTTGTTTGTCCCCAGTGGATCATCACCCTATGATGATAGCCCCATGGCCATAGGCTACAATGCCACCATATCTGCACCTCACATGCATGCTACCTGCCTTCAGTTGCTCGAAGACAATTTACAACCTGGGATGCACGCCCTCGACATTGGCTCTGGAACAGGGTATCTGACTGCGTGTTTTGCGTTGATGGTTGGACCCCAAGGCTGTGCTGTTGGCGTGGAGCATATTCCTGAATTGGTTTCCCTTGCAAAAGAAAATATTCAGAAAAGTGTTGCAGCTACACAATTGCAAGATGGTTCCCTTTCTGTTCATGTTGGTGATGGAAGGGAAGGTTGGCCAGAATTTGCTCCATATGATGCCATTCACGTTGGAGCGGCAGCACCAGAAATTCCCCAACCGCTCATCGACCAGTTGAAGCCTGGTGGGAGAATGGTGATTCCTGTAGGCAACATATTTCAAGATTTGAAGGTGGTGGATAAGAATTCTGATGGTTCTATCAGCGTCCGGACTGAGACCTCCGTTCGTTATGTGCCCCTCACTAGTCGAGAAGCTCAACTTCGCGGCTACTAA
Protein sequence

>MsG0380015737.01.T01

METVDRALFVPSGSSPYDDSPMAIGYNATISAPHMHATCLQLLEDNLQPGMHALDIGSGTGYLTACFALMVGPQGCAVGVEHIPELVSLAKENIQKSVAATQLQDGSLSVHVGDGREGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISVRTETSVRYVPLTSREAQLRGY*