Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016313.01.T01 | XP_003601978.1 | 93.772 | 578 | 30 | 4 | 1 | 573 | 1 | 577 | 0 | 1086 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016313.01.T01 | Q9SIN1 | 49.719 | 356 | 169 | 4 | 221 | 567 | 219 | 573 | 1.92E-107 | 340 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0380016313.01 | MsG0180000539.01 | PPI |
MsG0380016313.01 | MsG0180000706.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016313.01.T01 | MTR_3g087480 | 93.772 | 578 | 30 | 4 | 1 | 573 | 1 | 577 | 0.0 | 1086 |
MsG0380016313.01.T01 | MTR_5g063200 | 51.111 | 405 | 178 | 6 | 173 | 572 | 175 | 564 | 7.20e-130 | 395 |
MsG0380016313.01.T01 | MTR_3g074230 | 55.556 | 360 | 149 | 4 | 220 | 572 | 189 | 544 | 2.53e-129 | 392 |
MsG0380016313.01.T01 | MTR_3g074230 | 55.556 | 360 | 149 | 4 | 220 | 572 | 189 | 544 | 7.58e-129 | 392 |
MsG0380016313.01.T01 | MTR_2g078020 | 46.667 | 375 | 189 | 3 | 209 | 572 | 208 | 582 | 1.10e-112 | 350 |
MsG0380016313.01.T01 | MTR_2g078020 | 46.667 | 375 | 189 | 3 | 209 | 572 | 208 | 582 | 7.68e-112 | 349 |
MsG0380016313.01.T01 | MTR_6g013475 | 79.231 | 130 | 23 | 2 | 88 | 216 | 3 | 129 | 6.12e-62 | 201 |
MsG0380016313.01.T01 | MTR_4g076240 | 25.479 | 365 | 211 | 11 | 223 | 531 | 527 | 886 | 3.67e-21 | 98.6 |
MsG0380016313.01.T01 | MTR_7g090940 | 26.866 | 402 | 228 | 15 | 196 | 544 | 634 | 1022 | 3.03e-16 | 83.2 |
MsG0380016313.01.T01 | MTR_1g030300 | 28.070 | 171 | 118 | 2 | 178 | 348 | 142 | 307 | 2.29e-13 | 73.2 |
MsG0380016313.01.T01 | MTR_3g452710 | 33.028 | 109 | 71 | 1 | 223 | 329 | 12 | 120 | 6.07e-12 | 68.6 |
MsG0380016313.01.T01 | MTR_3g452710 | 33.028 | 109 | 71 | 1 | 223 | 329 | 12 | 120 | 7.89e-12 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016313.01.T01 | AT5G65160 | 53.422 | 599 | 227 | 12 | 7 | 572 | 11 | 590 | 0.0 | 595 |
MsG0380016313.01.T01 | AT5G10090 | 58.737 | 475 | 182 | 5 | 105 | 572 | 124 | 591 | 0.0 | 554 |
MsG0380016313.01.T01 | AT1G78120 | 53.699 | 365 | 164 | 3 | 214 | 573 | 151 | 515 | 1.01e-121 | 369 |
MsG0380016313.01.T01 | AT2G42580 | 49.719 | 356 | 169 | 4 | 221 | 567 | 219 | 573 | 1.95e-108 | 340 |
MsG0380016313.01.T01 | AT1G78120 | 54.154 | 325 | 147 | 2 | 214 | 536 | 151 | 475 | 2.67e-108 | 333 |
MsG0380016313.01.T01 | AT3G58620 | 45.580 | 362 | 189 | 4 | 214 | 567 | 203 | 564 | 6.02e-100 | 317 |
MsG0380016313.01.T01 | AT3G58620 | 45.580 | 362 | 189 | 4 | 214 | 567 | 203 | 564 | 6.96e-100 | 318 |
MsG0380016313.01.T01 | AT1G53300 | 44.875 | 361 | 189 | 4 | 221 | 572 | 226 | 585 | 3.85e-97 | 311 |
MsG0380016313.01.T01 | AT3G14950 | 44.167 | 360 | 193 | 4 | 221 | 572 | 257 | 616 | 2.45e-95 | 307 |
MsG0380016313.01.T01 | AT5G12430 | 27.154 | 383 | 222 | 14 | 223 | 552 | 609 | 987 | 1.95e-22 | 102 |
MsG0380016313.01.T01 | AT2G41520 | 26.291 | 426 | 234 | 18 | 217 | 571 | 545 | 961 | 9.18e-22 | 100 |
MsG0380016313.01.T01 | AT2G41520 | 26.291 | 426 | 234 | 18 | 217 | 571 | 445 | 861 | 9.67e-22 | 100 |
MsG0380016313.01.T01 | AT2G41520 | 26.895 | 409 | 222 | 19 | 217 | 571 | 545 | 930 | 3.85e-16 | 82.8 |
MsG0380016313.01.T01 | AT4G12400 | 24.507 | 355 | 238 | 11 | 223 | 564 | 3 | 340 | 9.99e-14 | 74.3 |
MsG0380016313.01.T01 | AT4G12400 | 24.507 | 355 | 238 | 11 | 223 | 564 | 3 | 340 | 1.02e-13 | 74.3 |
MsG0380016313.01.T01 | AT4G08320 | 34.694 | 98 | 64 | 0 | 213 | 310 | 166 | 263 | 7.49e-12 | 68.2 |
MsG0380016313.01.T01 | AT4G08320 | 34.694 | 98 | 64 | 0 | 213 | 310 | 166 | 263 | 8.99e-12 | 67.8 |
MsG0380016313.01.T01 | AT1G56440 | 34.746 | 118 | 72 | 2 | 457 | 570 | 85 | 201 | 5.14e-11 | 65.5 |
MsG0380016313.01.T01 | AT1G56440 | 34.746 | 118 | 72 | 2 | 457 | 570 | 75 | 191 | 5.34e-11 | 65.5 |
Find 130 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTATGTTGTATGGAAATTT+AGG | 0.096719 | 3:+81792175 | MsG0380016313.01.T01:CDS |
ACCAATTGGTCCAAAGAATT+TGG | 0.157579 | 3:-81793372 | None:intergenic |
AAAGAAGCTGTTGGTATTTC+AGG | 0.164915 | 3:+81792076 | MsG0380016313.01.T01:CDS |
GACGATTGTACCAAATTCTT+TGG | 0.195700 | 3:+81793362 | MsG0380016313.01.T01:CDS |
TTGTTTGCCATCTTGTTGTT+AGG | 0.206579 | 3:-81793587 | None:intergenic |
TGTGTCTCATGTACTCTTCT+TGG | 0.216034 | 3:+81794427 | MsG0380016313.01.T01:three_prime_UTR |
CTATTTAATTCCTCATCTTC+TGG | 0.221444 | 3:-81794035 | None:intergenic |
CTGCTTGTTTATAATGATAA+AGG | 0.245665 | 3:-81792813 | None:intergenic |
GGATTAATGACAACAGTATT+TGG | 0.247419 | 3:+81791782 | MsG0380016313.01.T01:CDS |
ATGGAAATTTAGGGAATATT+AGG | 0.268159 | 3:+81792185 | MsG0380016313.01.T01:CDS |
GCACGACAATATATTGTTAT+AGG | 0.269934 | 3:+81794110 | MsG0380016313.01.T01:three_prime_UTR |
GAACCACCACGTCGTCGTTT+TGG | 0.274837 | 3:-81791866 | None:intergenic |
CTTGCAAATGTTTATTCCTT+TGG | 0.288045 | 3:-81794162 | None:intergenic |
GAAATACCAACAGCTTCTTT+TGG | 0.293308 | 3:-81792073 | None:intergenic |
CAGATTTGATGATGCTTTAG+AGG | 0.308396 | 3:+81793538 | MsG0380016313.01.T01:intron |
TCCAGAGCAGTTGAAAATAA+TGG | 0.313493 | 3:+81792408 | MsG0380016313.01.T01:CDS |
TTATGTTGTATGGAAATTTA+GGG | 0.317802 | 3:+81792176 | MsG0380016313.01.T01:CDS |
GATTAGGAAATTTGCACTTT+AGG | 0.321043 | 3:+81792629 | MsG0380016313.01.T01:CDS |
CTTCAACTGCTTTCTCCAAT+TGG | 0.321511 | 3:-81793778 | None:intergenic |
TTTGGATCATTAACGTTGTT+TGG | 0.329256 | 3:-81791848 | None:intergenic |
CCAGAGCAGTTGAAAATAAT+GGG | 0.331941 | 3:+81792409 | MsG0380016313.01.T01:CDS |
AGCTCTTCTCAACCTTGCTT+TGG | 0.339234 | 3:-81793837 | None:intergenic |
ACCAAATTCTTTGGACCAAT+TGG | 0.343365 | 3:+81793371 | MsG0380016313.01.T01:CDS |
AATAAGAGTACTACTTCCTT+TGG | 0.349666 | 3:-81792134 | None:intergenic |
ATCATTAACGTTGTTTGGTA+TGG | 0.365292 | 3:-81791843 | None:intergenic |
AACAAATTTGAATTACCAAT+TGG | 0.367828 | 3:-81793386 | None:intergenic |
TCCGAGGCTTGCGTTGCATA+TGG | 0.372273 | 3:+81793683 | MsG0380016313.01.T01:CDS |
GATGAATTTGAAACCTTTGA+TGG | 0.375854 | 3:-81792013 | None:intergenic |
TGTTTGCCATCTTGTTGTTA+GGG | 0.377926 | 3:-81793586 | None:intergenic |
CAAAGTAAAATAGAGTTATA+TGG | 0.380890 | 3:-81793725 | None:intergenic |
TGCACCGGATGATAGAGTTT+TGG | 0.382756 | 3:-81792950 | None:intergenic |
CACGACAATATATTGTTATA+GGG | 0.384325 | 3:+81794111 | MsG0380016313.01.T01:three_prime_UTR |
ACTCTTATTCGCGCTTCGTC+TGG | 0.385363 | 3:+81792148 | MsG0380016313.01.T01:CDS |
GGAATTAAATAGAGCATTGT+TGG | 0.387923 | 3:+81794046 | MsG0380016313.01.T01:CDS |
TTCACTTTAGCAACCTCATC+AGG | 0.390431 | 3:-81792850 | None:intergenic |
TGCTTGTTTATAATGATAAA+GGG | 0.398764 | 3:-81792812 | None:intergenic |
AACCTTGCTTTGGTGTAAGA+TGG | 0.401622 | 3:-81793827 | None:intergenic |
TCTGGCAATGTTATGTTGTA+TGG | 0.402824 | 3:+81792166 | MsG0380016313.01.T01:CDS |
CATAGAGCTCATCATCGATT+AGG | 0.403953 | 3:+81792613 | MsG0380016313.01.T01:CDS |
CACGTGGTGGTTCACTTTGT+AGG | 0.410155 | 3:+81792365 | MsG0380016313.01.T01:CDS |
TTCTTCCTTCAACTTGTTGG+TGG | 0.418617 | 3:-81792338 | None:intergenic |
TAGATCAAAACTCGGCCAAT+TGG | 0.421549 | 3:+81793763 | MsG0380016313.01.T01:CDS |
ATGGATTATAGATGGAAAGA+TGG | 0.427946 | 3:+81793971 | MsG0380016313.01.T01:intron |
TAGAGCATTGTTGGAGGCTC+GGG | 0.429040 | 3:+81794055 | MsG0380016313.01.T01:CDS |
TGCACTGAGGCTCGCAGGTT+AGG | 0.440976 | 3:+81792898 | MsG0380016313.01.T01:CDS |
TTGGCAGCCTCTCCAGGAGG+AGG | 0.443877 | 3:+81791578 | MsG0380016313.01.T01:five_prime_UTR |
GCACTATTTGTTGAGGCTAA+AGG | 0.444600 | 3:+81794354 | MsG0380016313.01.T01:three_prime_UTR |
TTCAAATTCATCAACTACTC+AGG | 0.449757 | 3:+81792024 | MsG0380016313.01.T01:CDS |
CTGCTTTAACTGCTCTTGGT+AGG | 0.450208 | 3:+81792536 | MsG0380016313.01.T01:CDS |
AATGTCTTGGCAGCCTCTCC+AGG | 0.450718 | 3:+81791572 | MsG0380016313.01.T01:five_prime_UTR |
ATTTCGCCAGAGAGAAAATC+AGG | 0.454949 | 3:+81791755 | MsG0380016313.01.T01:CDS |
AGTGCTGCTTTAACTGCTCT+TGG | 0.456396 | 3:+81792532 | MsG0380016313.01.T01:CDS |
GTGACAGCTGCAAGAGGAAG+AGG | 0.456849 | 3:+81793632 | MsG0380016313.01.T01:CDS |
TTGAAGCTGTGTTTGAATGT+AGG | 0.462334 | 3:+81792563 | MsG0380016313.01.T01:CDS |
TGGATTATAGATGGAAAGAT+GGG | 0.467551 | 3:+81793972 | MsG0380016313.01.T01:intron |
ATCATCCACCAACAAGTTGA+AGG | 0.470429 | 3:+81792333 | MsG0380016313.01.T01:CDS |
TCATTAACGTTGTTTGGTAT+GGG | 0.474787 | 3:-81791842 | None:intergenic |
AGGCTCGCAGGTTAGGAGAT+TGG | 0.476698 | 3:+81792905 | MsG0380016313.01.T01:CDS |
ATAGAGCATTGTTGGAGGCT+CGG | 0.486677 | 3:+81794054 | MsG0380016313.01.T01:CDS |
ACGTGGTGGTTCACTTTGTA+GGG | 0.489232 | 3:+81792366 | MsG0380016313.01.T01:CDS |
ACCTTGCTTTGGTGTAAGAT+GGG | 0.490732 | 3:-81793826 | None:intergenic |
AATGCAAATTCAAATGCAAA+AGG | 0.491684 | 3:+81792268 | MsG0380016313.01.T01:CDS |
TAGGGCTATATCAACTAGAA+TGG | 0.493499 | 3:+81792384 | MsG0380016313.01.T01:CDS |
TAATCTACAATGCCTCCTCC+TGG | 0.494650 | 3:-81791590 | None:intergenic |
TGAAGCTGTGTTTGAATGTA+GGG | 0.506829 | 3:+81792564 | MsG0380016313.01.T01:CDS |
GTTGAAAATAATGGGGAATG+AGG | 0.512910 | 3:+81792417 | MsG0380016313.01.T01:CDS |
GGCAAACAAGGTGTTGAGAA+AGG | 0.512946 | 3:+81793601 | MsG0380016313.01.T01:CDS |
CGGTGCAGATTCTGCTCCAC+AGG | 0.516911 | 3:+81792966 | MsG0380016313.01.T01:CDS |
CAGATTAGGAGAAACGGATA+AGG | 0.517315 | 3:+81792789 | MsG0380016313.01.T01:intron |
ACCTCCAAAACTCTATCATC+CGG | 0.524405 | 3:+81792946 | MsG0380016313.01.T01:CDS |
AGGCATTGTAGATTATCTCC+TGG | 0.525036 | 3:+81791598 | MsG0380016313.01.T01:five_prime_UTR |
AGTATGACACGCTTCCTGTT+GGG | 0.526177 | 3:+81794183 | MsG0380016313.01.T01:three_prime_UTR |
ATTTGATGAACAAGAAGACT+TGG | 0.528008 | 3:-81791957 | None:intergenic |
TACATGAGACACAGCATACC+AGG | 0.529361 | 3:-81794417 | None:intergenic |
ATAGTTACAATATAATGTCT+TGG | 0.529429 | 3:+81791559 | MsG0380016313.01.T01:five_prime_UTR |
CTTTATCATTATAAACAAGC+AGG | 0.531498 | 3:+81792814 | MsG0380016313.01.T01:CDS |
TCCATATGCAACGCAAGCCT+CGG | 0.535262 | 3:-81793684 | None:intergenic |
TGCAATAGCTGCATCATACA+AGG | 0.535391 | 3:-81792473 | None:intergenic |
TCAAATTCATCAACTACTCA+GGG | 0.541512 | 3:+81792025 | MsG0380016313.01.T01:CDS |
GTAAGTGCACTGAGGCTCGC+AGG | 0.542799 | 3:+81792893 | MsG0380016313.01.T01:CDS |
GCTCAAGTTGATATAGCTGC+TGG | 0.549363 | 3:+81793419 | MsG0380016313.01.T01:CDS |
TTGAATTTGATGATCATGAG+AGG | 0.551558 | 3:-81791523 | None:intergenic |
TGATTACAGATTAGGAGAAA+CGG | 0.553077 | 3:+81792783 | MsG0380016313.01.T01:intron |
AAGAGAGACACCAGAAGATG+AGG | 0.555582 | 3:+81794025 | MsG0380016313.01.T01:CDS |
AACGCCACGTGGACCATCAA+AGG | 0.559475 | 3:+81792000 | MsG0380016313.01.T01:CDS |
ATTAAATAGAGCATTGTTGG+AGG | 0.561915 | 3:+81794049 | MsG0380016313.01.T01:CDS |
ACTCAGGGGTATGTTAATCA+AGG | 0.567874 | 3:+81792040 | MsG0380016313.01.T01:CDS |
GCTTGCGTTGCATATGGAGA+AGG | 0.573416 | 3:+81793689 | MsG0380016313.01.T01:CDS |
TGATGAGCTCTATGATAATG+AGG | 0.577068 | 3:-81792604 | None:intergenic |
CTTGCGTTGCATATGGAGAA+GGG | 0.577562 | 3:+81793690 | MsG0380016313.01.T01:CDS |
CCAGAGAGAAAATCAGGCTG+TGG | 0.577805 | 3:+81791761 | MsG0380016313.01.T01:CDS |
TAATAGTTATTCAAATGCAA+TGG | 0.579556 | 3:+81792222 | MsG0380016313.01.T01:CDS |
ACGACGTGGTGGTTCAAAAG+AGG | 0.580831 | 3:+81791874 | MsG0380016313.01.T01:CDS |
AAGTTGATATAGCTGCTGGC+AGG | 0.584890 | 3:+81793423 | MsG0380016313.01.T01:CDS |
TAATGACAACAGTATTTGGA+AGG | 0.585909 | 3:+81791786 | MsG0380016313.01.T01:CDS |
TAACAACAAGATGGCAAACA+AGG | 0.586586 | 3:+81793589 | MsG0380016313.01.T01:CDS |
AAGTATGACACGCTTCCTGT+TGG | 0.590499 | 3:+81794182 | MsG0380016313.01.T01:three_prime_UTR |
CGAGCTGTGACAGCTGCAAG+AGG | 0.594817 | 3:+81793626 | MsG0380016313.01.T01:CDS |
ACTAGACCCTAACAACAAGA+TGG | 0.595527 | 3:+81793580 | MsG0380016313.01.T01:CDS |
TACAATGCCTCCTCCTGGAG+AGG | 0.597090 | 3:-81791585 | None:intergenic |
GCAAATTCAAATGCAAAAGG+AGG | 0.597517 | 3:+81792271 | MsG0380016313.01.T01:CDS |
TCACTGCAGAACATTTCAGA+AGG | 0.603196 | 3:+81794321 | MsG0380016313.01.T01:three_prime_UTR |
TGTCTGCATCTTGATGCCTA+CGG | 0.609966 | 3:-81793307 | None:intergenic |
AAACACAGCACTATTTGTTG+AGG | 0.610792 | 3:+81794347 | MsG0380016313.01.T01:three_prime_UTR |
AGAGTTCCAAAAGAAGCTGT+TGG | 0.612914 | 3:+81792067 | MsG0380016313.01.T01:CDS |
CTGTGGAGCAGAATCTGCAC+CGG | 0.622358 | 3:-81792965 | None:intergenic |
TTATAAACAAGCAGGATCAG+AGG | 0.623703 | 3:+81792822 | MsG0380016313.01.T01:CDS |
GCCCATCTTACACCAAAGCA+AGG | 0.628552 | 3:+81793825 | MsG0380016313.01.T01:CDS |
AATTTAGGGAATATTAGGCA+AGG | 0.632462 | 3:+81792190 | MsG0380016313.01.T01:CDS |
GATCCAAAACGACGACGTGG+TGG | 0.632918 | 3:+81791863 | MsG0380016313.01.T01:CDS |
AGGGGTATGTTAATCAAGGT+AGG | 0.636580 | 3:+81792044 | MsG0380016313.01.T01:CDS |
ATGACACGCTTCCTGTTGGG+TGG | 0.640901 | 3:+81794186 | MsG0380016313.01.T01:three_prime_UTR |
TGAAGAATTGAAGATGCCAA+AGG | 0.643098 | 3:+81794146 | MsG0380016313.01.T01:three_prime_UTR |
AAGCGCTGATAAAACTCCGT+AGG | 0.646518 | 3:+81793291 | MsG0380016313.01.T01:CDS |
CAGAAAACGACAACGCCACG+TGG | 0.652747 | 3:+81791989 | MsG0380016313.01.T01:CDS |
ATCAGAGGCTGATCCTGATG+AGG | 0.654133 | 3:+81792837 | MsG0380016313.01.T01:CDS |
TGACAACAGTATTTGGAAGG+CGG | 0.657393 | 3:+81791789 | MsG0380016313.01.T01:CDS |
CAGAGCAGTTGAAAATAATG+GGG | 0.660016 | 3:+81792410 | MsG0380016313.01.T01:CDS |
GCAGCTTGTAGATCAAAACT+CGG | 0.660130 | 3:+81793755 | MsG0380016313.01.T01:CDS |
GAAACCTTTGATGGTCCACG+TGG | 0.673817 | 3:-81792004 | None:intergenic |
CAAGGCATCGAAATTCTCCG+AGG | 0.675699 | 3:+81793667 | MsG0380016313.01.T01:CDS |
TGTATAGTAGAACTTGCACC+TGG | 0.690284 | 3:+81794399 | MsG0380016313.01.T01:three_prime_UTR |
GTCTTGGCAGCCTCTCCAGG+AGG | 0.694977 | 3:+81791575 | MsG0380016313.01.T01:five_prime_UTR |
CAACTTAAGAAACAACGAGG+TGG | 0.710109 | 3:+81794080 | MsG0380016313.01.T01:CDS |
CAAATTCATCAACTACTCAG+GGG | 0.711670 | 3:+81792026 | MsG0380016313.01.T01:CDS |
AGCAGTTGAAGATTGTACTG+CGG | 0.725831 | 3:+81793790 | MsG0380016313.01.T01:CDS |
AATGATCCAAAACGACGACG+TGG | 0.732125 | 3:+81791860 | MsG0380016313.01.T01:CDS |
TCATTTAAGTAAGTGCACTG+AGG | 0.735333 | 3:+81792885 | MsG0380016313.01.T01:CDS |
TATGGGAGCAGAACCCACAG+AGG | 0.785471 | 3:-81791825 | None:intergenic |
GCGCAACTTAAGAAACAACG+AGG | 0.792961 | 3:+81794077 | MsG0380016313.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATACATAGAAAAAAAAAAT+GGG | + | Chr3:81791728-81791747 | MsG0380016313.01.T01:exon | 10.0% |
!! | TTATACATAGAAAAAAAAAA+TGG | + | Chr3:81791727-81791746 | MsG0380016313.01.T01:exon | 10.0% |
!!! | AATGAATATTTTAAATTGTT+GGG | + | Chr3:81793904-81793923 | MsG0380016313.01.T01:intron | 10.0% |
!!! | TAATGAATATTTTAAATTGT+TGG | + | Chr3:81793903-81793922 | MsG0380016313.01.T01:intron | 10.0% |
!! | AACAAATTTGAATTACCAAT+TGG | - | Chr3:81793389-81793408 | None:intergenic | 20.0% |
!! | AACACAATATTAAATGATTG+TGG | - | Chr3:81793516-81793535 | None:intergenic | 20.0% |
!! | AACTTGTATATTAATTACCT+TGG | - | Chr3:81793873-81793892 | None:intergenic | 20.0% |
!! | ATAGTTACAATATAATGTCT+TGG | + | Chr3:81791559-81791578 | MsG0380016313.01.T01:five_prime_UTR | 20.0% |
!! | CAAAGTAAAATAGAGTTATA+TGG | - | Chr3:81793728-81793747 | None:intergenic | 20.0% |
!! | TAATAGTTATTCAAATGCAA+TGG | + | Chr3:81792222-81792241 | MsG0380016313.01.T01:CDS | 20.0% |
!! | TGCTTGTTTATAATGATAAA+GGG | - | Chr3:81792815-81792834 | None:intergenic | 20.0% |
!! | TTATGTTGTATGGAAATTTA+GGG | + | Chr3:81792176-81792195 | MsG0380016313.01.T01:CDS | 20.0% |
!! | TTGAAGATATGATGATATAT+AGG | - | Chr3:81793013-81793032 | None:intergenic | 20.0% |
!!! | AATTTGCATTTTCAAAATAC+TGG | - | Chr3:81792258-81792277 | None:intergenic | 20.0% |
!!! | ATTTTATGATTTTTTGTTCC+AGG | - | Chr3:81791619-81791638 | None:intergenic | 20.0% |
!!! | TAGTTTATGATTTTGAATTG+TGG | + | Chr3:81793042-81793061 | MsG0380016313.01.T01:intron | 20.0% |
! | AATGATCATCAAAAATCCAA+AGG | + | Chr3:81792118-81792137 | MsG0380016313.01.T01:CDS | 25.0% |
! | AATGCAAATTCAAATGCAAA+AGG | + | Chr3:81792268-81792287 | MsG0380016313.01.T01:CDS | 25.0% |
! | AATGTTTATGCATTGTGAAA+TGG | + | Chr3:81793952-81793971 | MsG0380016313.01.T01:intron | 25.0% |
! | ATGGAAATTTAGGGAATATT+AGG | + | Chr3:81792185-81792204 | MsG0380016313.01.T01:CDS | 25.0% |
! | CACGACAATATATTGTTATA+GGG | + | Chr3:81794111-81794130 | MsG0380016313.01.T01:three_prime_UTR | 25.0% |
! | CTGCTTGTTTATAATGATAA+AGG | - | Chr3:81792816-81792835 | None:intergenic | 25.0% |
! | CTTGATATTGTAGTAAATTG+TGG | + | Chr3:81793096-81793115 | MsG0380016313.01.T01:intron | 25.0% |
! | CTTTATCATTATAAACAAGC+AGG | + | Chr3:81792814-81792833 | MsG0380016313.01.T01:CDS | 25.0% |
! | GTTATGTTGTATGGAAATTT+AGG | + | Chr3:81792175-81792194 | MsG0380016313.01.T01:CDS | 25.0% |
! | TTATAAAAATGGAAGATTCG+AGG | + | Chr3:81792441-81792460 | MsG0380016313.01.T01:CDS | 25.0% |
!! | ATTATTGCTGATTACAGATT+AGG | + | Chr3:81792775-81792794 | MsG0380016313.01.T01:intron | 25.0% |
!! | TCTCTACATTTTGTATTCTA+AGG | + | Chr3:81791652-81791671 | MsG0380016313.01.T01:five_prime_UTR | 25.0% |
!!! | AGGGTAATAGTTTTAATTTG+CGG | - | Chr3:81793169-81793188 | None:intergenic | 25.0% |
!!! | ATTGTGAAATGGATTATAGA+TGG | + | Chr3:81793963-81793982 | MsG0380016313.01.T01:intron | 25.0% |
AAAAAGTAGTCAGAATTCAG+AGG | + | Chr3:81791402-81791421 | MsG0380016313.01.T01:five_prime_UTR | 30.0% | |
AATTTAGGGAATATTAGGCA+AGG | + | Chr3:81792190-81792209 | MsG0380016313.01.T01:CDS | 30.0% | |
ATCATTAACGTTGTTTGGTA+TGG | - | Chr3:81791846-81791865 | None:intergenic | 30.0% | |
ATTTGATGAACAAGAAGACT+TGG | - | Chr3:81791960-81791979 | None:intergenic | 30.0% | |
CTATTTAATTCCTCATCTTC+TGG | - | Chr3:81794038-81794057 | None:intergenic | 30.0% | |
CTTGCAAATGTTTATTCCTT+TGG | - | Chr3:81794165-81794184 | None:intergenic | 30.0% | |
GATTAGGAAATTTGCACTTT+AGG | + | Chr3:81792629-81792648 | MsG0380016313.01.T01:CDS | 30.0% | |
GCACGACAATATATTGTTAT+AGG | + | Chr3:81794110-81794129 | MsG0380016313.01.T01:three_prime_UTR | 30.0% | |
GGATTAATGACAACAGTATT+TGG | + | Chr3:81791782-81791801 | MsG0380016313.01.T01:CDS | 30.0% | |
GGGAATGAGGATTATAAAAA+TGG | + | Chr3:81792430-81792449 | MsG0380016313.01.T01:CDS | 30.0% | |
TAATGACAACAGTATTTGGA+AGG | + | Chr3:81791786-81791805 | MsG0380016313.01.T01:CDS | 30.0% | |
TCAAATTCATCAACTACTCA+GGG | + | Chr3:81792025-81792044 | MsG0380016313.01.T01:CDS | 30.0% | |
TCATTAACGTTGTTTGGTAT+GGG | - | Chr3:81791845-81791864 | None:intergenic | 30.0% | |
TGATTACAGATTAGGAGAAA+CGG | + | Chr3:81792783-81792802 | MsG0380016313.01.T01:intron | 30.0% | |
TGGATTATAGATGGAAAGAT+GGG | + | Chr3:81793972-81793991 | MsG0380016313.01.T01:intron | 30.0% | |
TTCAAATTCATCAACTACTC+AGG | + | Chr3:81792024-81792043 | MsG0380016313.01.T01:CDS | 30.0% | |
TTTGGATCATTAACGTTGTT+TGG | - | Chr3:81791851-81791870 | None:intergenic | 30.0% | |
! | ACTCTATTTTACTTTGCAAC+CGG | + | Chr3:81793732-81793751 | MsG0380016313.01.T01:CDS | 30.0% |
! | ATGGATTATAGATGGAAAGA+TGG | + | Chr3:81793971-81793990 | MsG0380016313.01.T01:intron | 30.0% |
! | GATGAATTTGAAACCTTTGA+TGG | - | Chr3:81792016-81792035 | None:intergenic | 30.0% |
! | TTGAATTTGATGATCATGAG+AGG | - | Chr3:81791526-81791545 | None:intergenic | 30.0% |
! | TTTTTCTTCCTTCAACTTGT+TGG | - | Chr3:81792344-81792363 | None:intergenic | 30.0% |
!! | AATAAGAGTACTACTTCCTT+TGG | - | Chr3:81792137-81792156 | None:intergenic | 30.0% |
!! | ATTAAATAGAGCATTGTTGG+AGG | + | Chr3:81794049-81794068 | MsG0380016313.01.T01:CDS | 30.0% |
!! | CTGCAGTGAATTTCATTTTT+CGG | - | Chr3:81794310-81794329 | None:intergenic | 30.0% |
!! | CTTCTATAAGAAGCTGTTTT+AGG | - | Chr3:81792505-81792524 | None:intergenic | 30.0% |
!! | GGAATTAAATAGAGCATTGT+TGG | + | Chr3:81794046-81794065 | MsG0380016313.01.T01:CDS | 30.0% |
!! | GTGTTTGAAACATTTTGTGA+AGG | - | Chr3:81791917-81791936 | None:intergenic | 30.0% |
AAAGAAGCTGTTGGTATTTC+AGG | + | Chr3:81792076-81792095 | MsG0380016313.01.T01:CDS | 35.0% | |
ACCAAATTCTTTGGACCAAT+TGG | + | Chr3:81793371-81793390 | MsG0380016313.01.T01:CDS | 35.0% | |
ACCAATTGGTCCAAAGAATT+TGG | - | Chr3:81793375-81793394 | None:intergenic | 35.0% | |
ACGTGATAGAGAGATACATT+AGG | - | Chr3:81793189-81793208 | None:intergenic | 35.0% | |
AGCAAAATGTTACGTGTATC+TGG | - | Chr3:81792710-81792729 | None:intergenic | 35.0% | |
AGGAAATTTGCACTTTAGGT+AGG | + | Chr3:81792633-81792652 | MsG0380016313.01.T01:intron | 35.0% | |
ATTGTGATTGCGATATATCG+TGG | + | Chr3:81793124-81793143 | MsG0380016313.01.T01:intron | 35.0% | |
CAAATTCATCAACTACTCAG+GGG | + | Chr3:81792026-81792045 | MsG0380016313.01.T01:CDS | 35.0% | |
CAGAGCAGTTGAAAATAATG+GGG | + | Chr3:81792410-81792429 | MsG0380016313.01.T01:CDS | 35.0% | |
CCAGAGCAGTTGAAAATAAT+GGG | + | Chr3:81792409-81792428 | MsG0380016313.01.T01:CDS | 35.0% | |
CGTGATAGAGAGATACATTA+GGG | - | Chr3:81793188-81793207 | None:intergenic | 35.0% | |
GACGATTGTACCAAATTCTT+TGG | + | Chr3:81793362-81793381 | MsG0380016313.01.T01:CDS | 35.0% | |
GCAAATTCAAATGCAAAAGG+AGG | + | Chr3:81792271-81792290 | MsG0380016313.01.T01:CDS | 35.0% | |
GCTTATATTTAAGAGCAGAG+CGG | + | Chr3:81792727-81792746 | MsG0380016313.01.T01:intron | 35.0% | |
GGTACTCATCAGTTATTAAC+TGG | + | Chr3:81792987-81793006 | MsG0380016313.01.T01:intron | 35.0% | |
TAAAAATGGAAGATTCGAGG+AGG | + | Chr3:81792444-81792463 | MsG0380016313.01.T01:CDS | 35.0% | |
TAACAACAAGATGGCAAACA+AGG | + | Chr3:81793589-81793608 | MsG0380016313.01.T01:CDS | 35.0% | |
TAATAACTGATGAGTACCTG+TGG | - | Chr3:81792985-81793004 | None:intergenic | 35.0% | |
TAGGGCTATATCAACTAGAA+TGG | + | Chr3:81792384-81792403 | MsG0380016313.01.T01:CDS | 35.0% | |
TCATTTAAGTAAGTGCACTG+AGG | + | Chr3:81792885-81792904 | MsG0380016313.01.T01:CDS | 35.0% | |
TCCAGAGCAGTTGAAAATAA+TGG | + | Chr3:81792408-81792427 | MsG0380016313.01.T01:CDS | 35.0% | |
TCGAAAAAAACATCCTCTGT+GGG | + | Chr3:81791812-81791831 | MsG0380016313.01.T01:CDS | 35.0% | |
TCTGGCAATGTTATGTTGTA+TGG | + | Chr3:81792166-81792185 | MsG0380016313.01.T01:CDS | 35.0% | |
TGAAGAATTGAAGATGCCAA+AGG | + | Chr3:81794146-81794165 | MsG0380016313.01.T01:three_prime_UTR | 35.0% | |
TGAAGCTGTGTTTGAATGTA+GGG | + | Chr3:81792564-81792583 | MsG0380016313.01.T01:CDS | 35.0% | |
TTATAAACAAGCAGGATCAG+AGG | + | Chr3:81792822-81792841 | MsG0380016313.01.T01:CDS | 35.0% | |
TTGAAGCTGTGTTTGAATGT+AGG | + | Chr3:81792563-81792582 | MsG0380016313.01.T01:CDS | 35.0% | |
TTGAAGGAAGAAAAATCACG+TGG | + | Chr3:81792349-81792368 | MsG0380016313.01.T01:CDS | 35.0% | |
! | AAACACAGCACTATTTGTTG+AGG | + | Chr3:81794347-81794366 | MsG0380016313.01.T01:three_prime_UTR | 35.0% |
! | CTCTATTTTACTTTGCAACC+GGG | + | Chr3:81793733-81793752 | MsG0380016313.01.T01:CDS | 35.0% |
! | GAAATACCAACAGCTTCTTT+TGG | - | Chr3:81792076-81792095 | None:intergenic | 35.0% |
! | GTTGAAAATAATGGGGAATG+AGG | + | Chr3:81792417-81792436 | MsG0380016313.01.T01:CDS | 35.0% |
! | TGATGAGCTCTATGATAATG+AGG | - | Chr3:81792607-81792626 | None:intergenic | 35.0% |
!! | CAGATTTGATGATGCTTTAG+AGG | + | Chr3:81793538-81793557 | MsG0380016313.01.T01:intron | 35.0% |
!! | TGTTTGCCATCTTGTTGTTA+GGG | - | Chr3:81793589-81793608 | None:intergenic | 35.0% |
!! | TTGTTTGCCATCTTGTTGTT+AGG | - | Chr3:81793590-81793609 | None:intergenic | 35.0% |
!!! | AAGAGTGTTTTTTTGTGCAC+AGG | + | Chr3:81794213-81794232 | MsG0380016313.01.T01:three_prime_UTR | 35.0% |
AAGAGCTGATTGTAATGCCA+AGG | + | Chr3:81793853-81793872 | MsG0380016313.01.T01:intron | 40.0% | |
AAGGAAGAAAAATCACGTGG+TGG | + | Chr3:81792352-81792371 | MsG0380016313.01.T01:CDS | 40.0% | |
ACCTCCAAAACTCTATCATC+CGG | + | Chr3:81792946-81792965 | MsG0380016313.01.T01:CDS | 40.0% | |
ACTAGACCCTAACAACAAGA+TGG | + | Chr3:81793580-81793599 | MsG0380016313.01.T01:CDS | 40.0% | |
AGAGTTCCAAAAGAAGCTGT+TGG | + | Chr3:81792067-81792086 | MsG0380016313.01.T01:CDS | 40.0% | |
AGCAGTTGAAGATTGTACTG+CGG | + | Chr3:81793790-81793809 | MsG0380016313.01.T01:CDS | 40.0% | |
ATTTCGCCAGAGAGAAAATC+AGG | + | Chr3:81791755-81791774 | MsG0380016313.01.T01:CDS | 40.0% | |
CAACTTAAGAAACAACGAGG+TGG | + | Chr3:81794080-81794099 | MsG0380016313.01.T01:CDS | 40.0% | |
CAGATTAGGAGAAACGGATA+AGG | + | Chr3:81792789-81792808 | MsG0380016313.01.T01:intron | 40.0% | |
CTTCAACTGCTTTCTCCAAT+TGG | - | Chr3:81793781-81793800 | None:intergenic | 40.0% | |
GCAGCTTGTAGATCAAAACT+CGG | + | Chr3:81793755-81793774 | MsG0380016313.01.T01:CDS | 40.0% | |
GTCGAAAAAAACATCCTCTG+TGG | + | Chr3:81791811-81791830 | MsG0380016313.01.T01:CDS | 40.0% | |
TAGATCAAAACTCGGCCAAT+TGG | + | Chr3:81793763-81793782 | MsG0380016313.01.T01:CDS | 40.0% | |
TCACTGCAGAACATTTCAGA+AGG | + | Chr3:81794321-81794340 | MsG0380016313.01.T01:three_prime_UTR | 40.0% | |
TGACAACAGTATTTGGAAGG+CGG | + | Chr3:81791789-81791808 | MsG0380016313.01.T01:CDS | 40.0% | |
TGCAATAGCTGCATCATACA+AGG | - | Chr3:81792476-81792495 | None:intergenic | 40.0% | |
TGTATAGTAGAACTTGCACC+TGG | + | Chr3:81794399-81794418 | MsG0380016313.01.T01:three_prime_UTR | 40.0% | |
TGTGTCTCATGTACTCTTCT+TGG | + | Chr3:81794427-81794446 | MsG0380016313.01.T01:three_prime_UTR | 40.0% | |
TTCACTTTAGCAACCTCATC+AGG | - | Chr3:81792853-81792872 | None:intergenic | 40.0% | |
! | AACCTTGCTTTGGTGTAAGA+TGG | - | Chr3:81793830-81793849 | None:intergenic | 40.0% |
! | AAGAGGAAACGAGCTTTTCA+AGG | + | Chr3:81793649-81793668 | MsG0380016313.01.T01:CDS | 40.0% |
! | ACCTTGCTTTGGTGTAAGAT+GGG | - | Chr3:81793829-81793848 | None:intergenic | 40.0% |
! | ACTCAGGGGTATGTTAATCA+AGG | + | Chr3:81792040-81792059 | MsG0380016313.01.T01:CDS | 40.0% |
! | AGGCATTGTAGATTATCTCC+TGG | + | Chr3:81791598-81791617 | MsG0380016313.01.T01:five_prime_UTR | 40.0% |
! | AGGGGTATGTTAATCAAGGT+AGG | + | Chr3:81792044-81792063 | MsG0380016313.01.T01:CDS | 40.0% |
! | ATCATCCACCAACAAGTTGA+AGG | + | Chr3:81792333-81792352 | MsG0380016313.01.T01:CDS | 40.0% |
! | CATAGAGCTCATCATCGATT+AGG | + | Chr3:81792613-81792632 | MsG0380016313.01.T01:CDS | 40.0% |
! | CCCATTATTTTCAACTGCTC+TGG | - | Chr3:81792412-81792431 | None:intergenic | 40.0% |
! | GCACTATTTGTTGAGGCTAA+AGG | + | Chr3:81794354-81794373 | MsG0380016313.01.T01:three_prime_UTR | 40.0% |
! | TGTGCTGATATATGTGACAC+TGG | + | Chr3:81793238-81793257 | MsG0380016313.01.T01:intron | 40.0% |
!! | TTCTTCCTTCAACTTGTTGG+TGG | - | Chr3:81792341-81792360 | None:intergenic | 40.0% |
!!! | TGATAGAGTTTTGGAGGTCT+CGG | - | Chr3:81792944-81792963 | None:intergenic | 40.0% |
AAGAGAGACACCAGAAGATG+AGG | + | Chr3:81794025-81794044 | MsG0380016313.01.T01:CDS | 45.0% | |
AAGTATGACACGCTTCCTGT+TGG | + | Chr3:81794182-81794201 | MsG0380016313.01.T01:three_prime_UTR | 45.0% | |
AATGATCCAAAACGACGACG+TGG | + | Chr3:81791860-81791879 | MsG0380016313.01.T01:CDS | 45.0% | |
ACGTGGTGGTTCACTTTGTA+GGG | + | Chr3:81792366-81792385 | MsG0380016313.01.T01:CDS | 45.0% | |
AGCTCTTCTCAACCTTGCTT+TGG | - | Chr3:81793840-81793859 | None:intergenic | 45.0% | |
AGTATGACACGCTTCCTGTT+GGG | + | Chr3:81794183-81794202 | MsG0380016313.01.T01:three_prime_UTR | 45.0% | |
CTGCTTTAACTGCTCTTGGT+AGG | + | Chr3:81792536-81792555 | MsG0380016313.01.T01:CDS | 45.0% | |
CTTGCGTTGCATATGGAGAA+GGG | + | Chr3:81793690-81793709 | MsG0380016313.01.T01:CDS | 45.0% | |
GCGCAACTTAAGAAACAACG+AGG | + | Chr3:81794077-81794096 | MsG0380016313.01.T01:CDS | 45.0% | |
GTGGCCACAAAAACAATTGC+AGG | + | Chr3:81793143-81793162 | MsG0380016313.01.T01:intron | 45.0% | |
TAATCTACAATGCCTCCTCC+TGG | - | Chr3:81791593-81791612 | None:intergenic | 45.0% | |
TACATGAGACACAGCATACC+AGG | - | Chr3:81794420-81794439 | None:intergenic | 45.0% | |
TGTCTGCATCTTGATGCCTA+CGG | - | Chr3:81793310-81793329 | None:intergenic | 45.0% | |
! | TGCACCGGATGATAGAGTTT+TGG | - | Chr3:81792953-81792972 | None:intergenic | 45.0% |
!! | AAGCGCTGATAAAACTCCGT+AGG | + | Chr3:81793291-81793310 | MsG0380016313.01.T01:CDS | 45.0% |
!! | AAGTTGATATAGCTGCTGGC+AGG | + | Chr3:81793423-81793442 | MsG0380016313.01.T01:CDS | 45.0% |
!! | ACCGGATGATAGAGTTTTGG+AGG | - | Chr3:81792950-81792969 | None:intergenic | 45.0% |
!! | ACGGAGTTTTATCAGCGCTT+CGG | - | Chr3:81793291-81793310 | None:intergenic | 45.0% |
!! | AGTGCTGCTTTAACTGCTCT+TGG | + | Chr3:81792532-81792551 | MsG0380016313.01.T01:CDS | 45.0% |
!! | ATAGAGCATTGTTGGAGGCT+CGG | + | Chr3:81794054-81794073 | MsG0380016313.01.T01:CDS | 45.0% |
!! | GCTCAAGTTGATATAGCTGC+TGG | + | Chr3:81793419-81793438 | MsG0380016313.01.T01:CDS | 45.0% |
!! | GGCAAACAAGGTGTTGAGAA+AGG | + | Chr3:81793601-81793620 | MsG0380016313.01.T01:CDS | 45.0% |
!! | GTTTTGATCTACAAGCTGCC+CGG | - | Chr3:81793754-81793773 | None:intergenic | 45.0% |
ACGACGTGGTGGTTCAAAAG+AGG | + | Chr3:81791874-81791893 | MsG0380016313.01.T01:CDS | 50.0% | |
ACTCTTATTCGCGCTTCGTC+TGG | + | Chr3:81792148-81792167 | MsG0380016313.01.T01:CDS | 50.0% | |
ATCAGAGGCTGATCCTGATG+AGG | + | Chr3:81792837-81792856 | MsG0380016313.01.T01:CDS | 50.0% | |
CACGTGGTGGTTCACTTTGT+AGG | + | Chr3:81792365-81792384 | MsG0380016313.01.T01:CDS | 50.0% | |
CCAGAGAGAAAATCAGGCTG+TGG | + | Chr3:81791761-81791780 | MsG0380016313.01.T01:CDS | 50.0% | |
GCCCATCTTACACCAAAGCA+AGG | + | Chr3:81793825-81793844 | MsG0380016313.01.T01:CDS | 50.0% | |
GCTTGCGTTGCATATGGAGA+AGG | + | Chr3:81793689-81793708 | MsG0380016313.01.T01:CDS | 50.0% | |
TCCATATGCAACGCAAGCCT+CGG | - | Chr3:81793687-81793706 | None:intergenic | 50.0% | |
! | CACTCTTTTCTCCACCCAAC+AGG | - | Chr3:81794200-81794219 | None:intergenic | 50.0% |
! | CCACAGCCTGATTTTCTCTC+TGG | - | Chr3:81791764-81791783 | None:intergenic | 50.0% |
! | GAAACCTTTGATGGTCCACG+TGG | - | Chr3:81792007-81792026 | None:intergenic | 50.0% |
!! | CAAGGCATCGAAATTCTCCG+AGG | + | Chr3:81793667-81793686 | MsG0380016313.01.T01:CDS | 50.0% |
!! | TAGAGCATTGTTGGAGGCTC+GGG | + | Chr3:81794055-81794074 | MsG0380016313.01.T01:CDS | 50.0% |
!!! | GCGGCCTGCAATTGTTTTTG+TGG | - | Chr3:81793150-81793169 | None:intergenic | 50.0% |
AACGCCACGTGGACCATCAA+AGG | + | Chr3:81792000-81792019 | MsG0380016313.01.T01:CDS | 55.0% | |
AATGTCTTGGCAGCCTCTCC+AGG | + | Chr3:81791572-81791591 | MsG0380016313.01.T01:five_prime_UTR | 55.0% | |
AGGCTCGCAGGTTAGGAGAT+TGG | + | Chr3:81792905-81792924 | MsG0380016313.01.T01:CDS | 55.0% | |
ATGACACGCTTCCTGTTGGG+TGG | + | Chr3:81794186-81794205 | MsG0380016313.01.T01:three_prime_UTR | 55.0% | |
CAGAAAACGACAACGCCACG+TGG | + | Chr3:81791989-81792008 | MsG0380016313.01.T01:CDS | 55.0% | |
CTGTGGAGCAGAATCTGCAC+CGG | - | Chr3:81792968-81792987 | None:intergenic | 55.0% | |
GATCCAAAACGACGACGTGG+TGG | + | Chr3:81791863-81791882 | MsG0380016313.01.T01:CDS | 55.0% | |
GTGACAGCTGCAAGAGGAAG+AGG | + | Chr3:81793632-81793651 | MsG0380016313.01.T01:CDS | 55.0% | |
TACAATGCCTCCTCCTGGAG+AGG | - | Chr3:81791588-81791607 | None:intergenic | 55.0% | |
TATGGGAGCAGAACCCACAG+AGG | - | Chr3:81791828-81791847 | None:intergenic | 55.0% | |
TCCGAGGCTTGCGTTGCATA+TGG | + | Chr3:81793683-81793702 | MsG0380016313.01.T01:CDS | 55.0% | |
! | GAACCACCACGTCGTCGTTT+TGG | - | Chr3:81791869-81791888 | None:intergenic | 55.0% |
!!! | CGTGGCGTTGTCGTTTTCTG+TGG | - | Chr3:81791989-81792008 | None:intergenic | 55.0% |
CGAGCTGTGACAGCTGCAAG+AGG | + | Chr3:81793626-81793645 | MsG0380016313.01.T01:CDS | 60.0% | |
CGGTGCAGATTCTGCTCCAC+AGG | + | Chr3:81792966-81792985 | MsG0380016313.01.T01:CDS | 60.0% | |
GTAAGTGCACTGAGGCTCGC+AGG | + | Chr3:81792893-81792912 | MsG0380016313.01.T01:CDS | 60.0% | |
TGCACTGAGGCTCGCAGGTT+AGG | + | Chr3:81792898-81792917 | MsG0380016313.01.T01:CDS | 60.0% | |
GTCTTGGCAGCCTCTCCAGG+AGG | + | Chr3:81791575-81791594 | MsG0380016313.01.T01:five_prime_UTR | 65.0% | |
TTGGCAGCCTCTCCAGGAGG+AGG | + | Chr3:81791578-81791597 | MsG0380016313.01.T01:five_prime_UTR | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 81791381 | 81794512 | 81791381 | ID=MsG0380016313.01;Name=MsG0380016313.01 |
Chr3 | mRNA | 81791381 | 81794512 | 81791381 | ID=MsG0380016313.01.T01;Parent=MsG0380016313.01;Name=MsG0380016313.01.T01;_AED=0.48;_eAED=0.48;_QI=365|0.75|0.8|1|1|1|5|406|573 |
Chr3 | exon | 81791381 | 81792650 | 81791381 | ID=MsG0380016313.01.T01:exon:13803;Parent=MsG0380016313.01.T01 |
Chr3 | exon | 81792792 | 81792987 | 81792792 | ID=MsG0380016313.01.T01:exon:13804;Parent=MsG0380016313.01.T01 |
Chr3 | exon | 81793272 | 81793444 | 81793272 | ID=MsG0380016313.01.T01:exon:13805;Parent=MsG0380016313.01.T01 |
Chr3 | exon | 81793541 | 81793863 | 81793541 | ID=MsG0380016313.01.T01:exon:13806;Parent=MsG0380016313.01.T01 |
Chr3 | exon | 81793982 | 81794512 | 81793982 | ID=MsG0380016313.01.T01:exon:13807;Parent=MsG0380016313.01.T01 |
Chr3 | five_prime_UTR | 81791381 | 81791745 | 81791381 | ID=MsG0380016313.01.T01:five_prime_utr;Parent=MsG0380016313.01.T01 |
Chr3 | CDS | 81791746 | 81792650 | 81791746 | ID=MsG0380016313.01.T01:cds;Parent=MsG0380016313.01.T01 |
Chr3 | CDS | 81792792 | 81792987 | 81792792 | ID=MsG0380016313.01.T01:cds;Parent=MsG0380016313.01.T01 |
Chr3 | CDS | 81793272 | 81793444 | 81793272 | ID=MsG0380016313.01.T01:cds;Parent=MsG0380016313.01.T01 |
Chr3 | CDS | 81793541 | 81793863 | 81793541 | ID=MsG0380016313.01.T01:cds;Parent=MsG0380016313.01.T01 |
Chr3 | CDS | 81793982 | 81794106 | 81793982 | ID=MsG0380016313.01.T01:cds;Parent=MsG0380016313.01.T01 |
Chr3 | three_prime_UTR | 81794107 | 81794512 | 81794107 | ID=MsG0380016313.01.T01:three_prime_utr;Parent=MsG0380016313.01.T01 |
Gene Sequence |
Protein sequence |