AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016554.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016554.01.T01 MTR_3g091840 94.521 73 4 0 22 94 30 102 3.23e-47 149
MsG0380016554.01.T01 MTR_8g027255 67.532 77 25 0 22 98 30 106 6.51e-34 115
MsG0380016554.01.T01 MTR_1g077750 66.197 71 20 1 22 92 30 96 3.72e-29 103
MsG0380016554.01.T01 MTR_7g068250 53.947 76 35 0 25 100 37 112 2.15e-24 91.7
MsG0380016554.01.T01 MTR_2g078670 54.286 70 32 0 25 94 37 106 4.77e-24 90.9
MsG0380016554.01.T01 MTR_5g082490 46.512 86 46 0 25 110 37 122 5.49e-23 88.2
MsG0380016554.01.T01 MTR_1g077760 42.718 103 52 2 36 134 1 100 6.20e-23 88.2
MsG0380016554.01.T01 MTR_8g058785 47.436 78 40 1 27 103 39 116 8.64e-23 87.8
MsG0380016554.01.T01 MTR_8g061270 47.436 78 40 1 27 103 39 116 8.64e-23 87.8
MsG0380016554.01.T01 MTR_3g070330 55.224 67 30 0 25 91 60 126 1.91e-22 86.7
MsG0380016554.01.T01 MTR_3g070330 52.000 75 36 0 25 99 60 134 2.57e-22 87.0
MsG0380016554.01.T01 MTR_4g088505 46.575 73 39 0 22 94 34 106 8.35e-20 80.1
MsG0380016554.01.T01 MTR_4g088505 45.098 51 28 0 21 71 33 83 5.08e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016554.01.T01 AT4G27745 78.082 73 16 0 22 94 30 102 3.62e-38 126
MsG0380016554.01.T01 AT4G27745 78.082 73 16 0 22 94 30 102 3.62e-38 126
MsG0380016554.01.T01 AT4G27745 78.082 73 16 0 22 94 30 102 3.62e-38 126
MsG0380016554.01.T01 AT4G27745 78.082 73 16 0 22 94 30 102 3.62e-38 126
MsG0380016554.01.T01 AT4G27740 56.579 76 33 0 21 96 29 104 4.10e-25 92.8
MsG0380016554.01.T01 AT3G08990 56.000 75 33 0 25 99 37 111 1.28e-24 92.4
MsG0380016554.01.T01 AT3G08990 56.000 75 33 0 25 99 37 111 1.28e-24 92.4
MsG0380016554.01.T01 AT3G08990 56.000 75 33 0 25 99 37 111 1.28e-24 92.4
MsG0380016554.01.T01 AT5G53940 51.429 70 34 0 25 94 37 106 8.76e-24 90.1
MsG0380016554.01.T01 AT3G11230 52.703 74 35 0 17 90 62 135 1.00e-23 90.5
MsG0380016554.01.T01 AT3G11230 49.398 83 42 0 17 99 62 144 1.20e-23 90.9
MsG0380016554.01.T01 AT3G11230 52.703 74 35 0 17 90 29 102 1.20e-23 89.4
MsG0380016554.01.T01 AT3G11230 53.333 75 35 0 25 99 37 111 1.37e-23 89.7
MsG0380016554.01.T01 AT3G55890 58.462 65 27 0 25 89 37 101 1.58e-23 89.0
MsG0380016554.01.T01 AT3G55890 58.462 65 27 0 25 89 37 101 1.58e-23 89.0
MsG0380016554.01.T01 AT3G55890 56.522 69 30 0 25 93 37 105 2.59e-23 89.0
MsG0380016554.01.T01 AT3G55890 56.522 69 30 0 25 93 37 105 2.59e-23 89.0
MsG0380016554.01.T01 AT2G40110 49.333 75 38 0 25 99 37 111 2.45e-21 84.0
MsG0380016554.01.T01 AT2G40110 51.515 66 32 0 25 90 37 102 8.23e-21 82.0
MsG0380016554.01.T01 AT2G40110 46.809 47 25 0 25 71 37 83 1.12e-11 58.2
MsG0380016554.01.T01 AT2G40110 46.809 47 25 0 25 71 37 83 1.12e-11 58.2

Find 37 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACTCATCTTTACCTATTT+TGG 0.093073 3:-85083073 MsG0380016554.01.T01:CDS
ATGAGGAAATATAATGAAAT+TGG 0.233343 3:+85083034 None:intergenic
AAGAGATGCCTGTCTTCTTT+TGG 0.254022 3:+85083336 None:intergenic
TTGAAAAGTCAAAATTGTTA+TGG 0.305627 3:-85083197 MsG0380016554.01.T01:CDS
ATAAATAAAATGAATGGATT+GGG 0.345797 3:+85083140 None:intergenic
AGCAATGACAAATCCAAAAT+AGG 0.370696 3:+85083060 None:intergenic
TGGTGATTGTCGTGAAGTGC+TGG 0.372228 3:-85083280 MsG0380016554.01.T01:CDS
TCAAAATTGTTATGGAGAAC+TGG 0.392507 3:-85083189 MsG0380016554.01.T01:CDS
CATAAATAAAATGAATGGAT+TGG 0.395525 3:+85083139 None:intergenic
ATGTAGATTTATTCATGCTT+TGG 0.399685 3:-85083116 MsG0380016554.01.T01:CDS
CGACTCATGACAGTTTCTAA+TGG 0.402766 3:-85088806 MsG0380016554.01.T01:CDS
GTTTCTAATGGAAAGCTATC+AGG 0.413551 3:-85088794 MsG0380016554.01.T01:intron
TACATCATAAATAAAATGAA+TGG 0.464166 3:+85083134 None:intergenic
GAAGTACGAAAGAGCGTATG+AGG 0.502168 3:-85083253 MsG0380016554.01.T01:CDS
GAAGACAGGCATCTCTTGAC+TGG 0.509264 3:-85083330 MsG0380016554.01.T01:CDS
CAGTGACAACATTCATTGCA+TGG 0.547511 3:+85083361 None:intergenic
CATGCAATGAATGTTGTCAC+TGG 0.550116 3:-85083360 MsG0380016554.01.T01:CDS
ATTGTCGTGAAGTGCTGGGT+TGG 0.550480 3:-85083275 MsG0380016554.01.T01:CDS
TTTGGATGTGCACAATGTAC+AGG 0.559216 3:-85083098 MsG0380016554.01.T01:CDS
TTGGGGAACAAAGCTGCAGA+AGG 0.568517 3:+85083158 None:intergenic
CATTGCATGGGAAAACAGAA+AGG 0.570564 3:+85083374 None:intergenic
TCACTGGGCCAAAAGAAGAC+AGG 0.572382 3:-85083344 MsG0380016554.01.T01:CDS
GGTGATTGTCGTGAAGTGCT+GGG 0.578151 3:-85083279 MsG0380016554.01.T01:CDS
CATGGGAAAACAGAAAGGCT+CGG 0.593139 3:+85083379 None:intergenic
TGCTACCTTAATGGTTGACA+AGG 0.593824 3:-85088932 None:intergenic
TAAATAAAATGAATGGATTG+GGG 0.595076 3:+85083141 None:intergenic
AGTGACAACATTCATTGCAT+GGG 0.597466 3:+85083362 None:intergenic
TGAGGCGTCCCAGAAGTACA+AGG 0.604854 3:-85083235 MsG0380016554.01.T01:CDS
TACCTTAATGGTTGACAAGG+AGG 0.609514 3:-85088929 None:intergenic
GCGTCCCAGAAGTACAAGGA+AGG 0.640509 3:-85083231 MsG0380016554.01.T01:CDS
TCACTTCTAGTCACAACATG+AGG 0.644045 3:+85083017 None:intergenic
TGGGGAACAAAGCTGCAGAA+GGG 0.663458 3:+85083159 None:intergenic
ATGCAATGAATGTTGTCACT+GGG 0.665460 3:-85083359 MsG0380016554.01.T01:CDS
AAACATCGGCAACAGTGTGG+AGG 0.669170 3:+85083307 None:intergenic
ACAATCACCACAGTAAACAT+CGG 0.673082 3:+85083293 None:intergenic
AGTAAACATCGGCAACAGTG+TGG 0.687539 3:+85083304 None:intergenic
ACTGTTGCCGATGTTTACTG+TGG 0.707487 3:-85083300 MsG0380016554.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATGGAAATAAT+TGG + Chr3:85086722-85086741 None:intergenic 10.0%
!! AAAAAAAAATGGAAATAATT+GGG + Chr3:85086721-85086740 None:intergenic 10.0%
!! AAATAATTAATTAATTATGG+CGG - Chr3:85086605-85086624 MsG0380016554.01.T01:intron 10.0%
!! ACCAAATAATTAATTAATTA+TGG - Chr3:85086602-85086621 MsG0380016554.01.T01:intron 10.0%
!!! AATTAATAATTTGTTTCTTT+TGG - Chr3:85084970-85084989 MsG0380016554.01.T01:intron 10.0%
!!! ATTTTTTTTTTTATGAGAAA+TGG - Chr3:85085677-85085696 MsG0380016554.01.T01:intron 10.0%
!! AAATCTAATGTTAAAAAAAG+TGG + Chr3:85084674-85084693 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - Chr3:85084387-85084406 MsG0380016554.01.T01:intron 15.0%
!! ACATATAATCTAAAAAGAAA+AGG - Chr3:85085039-85085058 MsG0380016554.01.T01:intron 15.0%
!! ATACAAAAGTTAATTATAAG+CGG - Chr3:85086390-85086409 MsG0380016554.01.T01:intron 15.0%
!! GCCATAATTAATTAATTATT+TGG + Chr3:85086606-85086625 None:intergenic 15.0%
!! GTAATATTATGAAATAAGTT+TGG + Chr3:85087594-85087613 None:intergenic 15.0%
!! TACATCATAAATAAAATGAA+TGG + Chr3:85088791-85088810 None:intergenic 15.0%
!! TATCTATATCTAAATCAAAT+TGG - Chr3:85086309-85086328 MsG0380016554.01.T01:intron 15.0%
!! TATTAATTAACAATGAATCA+AGG + Chr3:85084958-85084977 None:intergenic 15.0%
!! TCAAAATAAAAATATCTCAT+TGG + Chr3:85086428-85086447 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + Chr3:85084315-85084296 None:intergenic 15.0%
!! TTGTAAAATTAAATGTGTAA+TGG - Chr3:85084844-85084863 MsG0380016554.01.T01:intron 15.0%
!!! AGTTTTTTATCGTTAAAAAA+AGG - Chr3:85083907-85083926 MsG0380016554.01.T01:intron 15.0%
!!! ATAAATAAAATGAATGGATT+GGG + Chr3:85088785-85088804 None:intergenic 15.0%
!!! ATTACTTTTACTAATAAAAC+AGG + Chr3:85088212-85088231 None:intergenic 15.0%
!!! GTAATTTTTAAAATCAAACT+TGG + Chr3:85086844-85086863 None:intergenic 15.0%
!!! GTTTTTTATCGTTAAAAAAA+GGG - Chr3:85083908-85083927 MsG0380016554.01.T01:intron 15.0%
!!! TAATTAATGTTTTCATTTCT+CGG - Chr3:85084540-85084559 MsG0380016554.01.T01:intron 15.0%
!!! TCAATTTCACTTTTTTTTAA+GGG + Chr3:85084461-85084480 None:intergenic 15.0%
!!! TGTTTGTAAATAGATTTTTA+AGG - Chr3:85087018-85087037 MsG0380016554.01.T01:intron 15.0%
!! AAACAAATTTGAATTGAGTA+GGG - Chr3:85084325-85084344 MsG0380016554.01.T01:intron 20.0%
!! AACAAAAAAAGAAATGCTAA+AGG + Chr3:85088270-85088289 None:intergenic 20.0%
!! AGATAAAAGTAGATAAAATC+TGG - Chr3:85084199-85084218 MsG0380016554.01.T01:intron 20.0%
!! AGGTGATTAAAAAATTGTTA+TGG + Chr3:85086035-85086054 None:intergenic 20.0%
!! AGTGATATTGTAATATAAAC+CGG - Chr3:85088923-85088942 MsG0380016554.01.T01:intron 20.0%
!! ATACTATAGTTTATATAGAG+AGG + Chr3:85087940-85087959 None:intergenic 20.0%
!! ATCCATCATGTATAAAAAAA+AGG + Chr3:85083543-85083562 None:intergenic 20.0%
!! ATCTCAAAAATATTGTCAAT+TGG + Chr3:85085544-85085563 None:intergenic 20.0%
!! ATGAGGAAATATAATGAAAT+TGG + Chr3:85088891-85088910 None:intergenic 20.0%
!! CATAAATAAAATGAATGGAT+TGG + Chr3:85088786-85088805 None:intergenic 20.0%
!! CTAACTATATATTTCAGATA+TGG + Chr3:85086580-85086599 None:intergenic 20.0%
!! GAAACCAAAACTAAATTAAA+CGG + Chr3:85085943-85085962 None:intergenic 20.0%
!! GTACAGTTATACATATTTAT+TGG + Chr3:85085522-85085541 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - Chr3:85084324-85084343 MsG0380016554.01.T01:intron 20.0%
!! TAATAGATACTAGATCATTT+AGG + Chr3:85086291-85086310 None:intergenic 20.0%
!! TAATCTAACCATGAAAAAAA+TGG - Chr3:85085432-85085451 MsG0380016554.01.T01:intron 20.0%
!! TACTATAGTTTATATAGAGA+GGG + Chr3:85087939-85087958 None:intergenic 20.0%
!! TATAATCATGCAAAAAGTAA+TGG + Chr3:85083513-85083532 None:intergenic 20.0%
!! TTGAAAAGTCAAAATTGTTA+TGG - Chr3:85088725-85088744 MsG0380016554.01.T01:intron 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - Chr3:85084234-85084253 MsG0380016554.01.T01:intron 20.0%
!!! ACACAAATTTGATTTTGTTA+TGG - Chr3:85085003-85085022 MsG0380016554.01.T01:intron 20.0%
!!! AGTTAGATTTTACTTATCTT+TGG - Chr3:85084570-85084589 MsG0380016554.01.T01:intron 20.0%
!!! CACAAATTTGATTTTGTTAT+GGG - Chr3:85085004-85085023 MsG0380016554.01.T01:intron 20.0%
!!! CACATTTAATTTTACAATGT+TGG + Chr3:85084841-85084860 None:intergenic 20.0%
!!! CATAATTATTTTGAGTAAGT+AGG + Chr3:85086055-85086074 None:intergenic 20.0%
!!! CTCAATTTCACTTTTTTTTA+AGG + Chr3:85084462-85084481 None:intergenic 20.0%
!!! GTTTGTTTCTAAATAGAAAA+TGG - Chr3:85088292-85088311 MsG0380016554.01.T01:intron 20.0%
!!! TAAATAAAATGAATGGATTG+GGG + Chr3:85088784-85088803 None:intergenic 20.0%
!!! TATCTCAAGATTTTTTTGAA+AGG + Chr3:85085569-85085588 None:intergenic 20.0%
!!! TTTGATTAGTTGTTTGTTTA+CGG + Chr3:85086232-85086251 None:intergenic 20.0%
!!! TTTTCATTAATTTTGTAACC+AGG - Chr3:85088511-85088530 MsG0380016554.01.T01:intron 20.0%
!!! TTTTTTTTATACATGATGGA+TGG - Chr3:85083542-85083561 MsG0380016554.01.T01:intron 20.0%
!!! TTTTTTTTTCCTTTCAACAA+TGG + Chr3:85085265-85085284 None:intergenic 20.0%
! AAGAGAATAATGTAAAAGTG+AGG - Chr3:85085309-85085328 MsG0380016554.01.T01:intron 25.0%
! AATTAGATGGTAAACAATAG+TGG + Chr3:85083622-85083641 None:intergenic 25.0%
! ACAATATCAGTAAATGATCA+AGG + Chr3:85088491-85088510 None:intergenic 25.0%
! ACATCAAAAGAAGAATTAGT+TGG + Chr3:85088415-85088434 None:intergenic 25.0%
! ACCAAAACAATTGAAGAATT+TGG - Chr3:85083405-85083424 MsG0380016554.01.T01:intron 25.0%
! ACTTTATAATCTGTGAAGTT+CGG - Chr3:85085700-85085719 MsG0380016554.01.T01:intron 25.0%
! AGTGACACAATTAAACATAT+GGG - Chr3:85087292-85087311 MsG0380016554.01.T01:intron 25.0%
! AGTGCAGAAAAACAAAATTA+GGG - Chr3:85084358-85084377 MsG0380016554.01.T01:intron 25.0%
! ATATGAATAGGAGAATCAAA+AGG - Chr3:85087422-85087441 MsG0380016554.01.T01:intron 25.0%
! ATCTTGAGATATATCGATAT+AGG - Chr3:85085578-85085597 MsG0380016554.01.T01:intron 25.0%
! ATGTAGATTTATTCATGCTT+TGG - Chr3:85088806-85088825 MsG0380016554.01.T01:CDS 25.0%
! ATTAATTTCTCTTGCACTAT+AGG - Chr3:85086817-85086836 MsG0380016554.01.T01:intron 25.0%
! CTCTTTAGTAAATAAAGCAA+TGG - Chr3:85088135-85088154 MsG0380016554.01.T01:intron 25.0%
! GTTATAAAAGGGGAAATATT+GGG - Chr3:85088162-85088181 MsG0380016554.01.T01:intron 25.0%
! TAACAGAAAGGAATCAATAT+TGG + Chr3:85085187-85085206 None:intergenic 25.0%
! TATGAATAGGAGAATCAAAA+GGG - Chr3:85087423-85087442 MsG0380016554.01.T01:intron 25.0%
! TATTGAACCTAGAAATTGTA+CGG + Chr3:85088244-85088263 None:intergenic 25.0%
! TCATGATGATATTATTTCCA+AGG - Chr3:85086683-85086702 MsG0380016554.01.T01:intron 25.0%
! TGATTGATTAGAACAATTCT+TGG + Chr3:85085748-85085767 None:intergenic 25.0%
! TGTGAATTCAACAAAACAAA+AGG + Chr3:85083753-85083772 None:intergenic 25.0%
! TGTTATAAAAGGGGAAATAT+TGG - Chr3:85088161-85088180 MsG0380016554.01.T01:intron 25.0%
! TTAATTAATTCATCGCAAAG+AGG + Chr3:85086476-85086495 None:intergenic 25.0%
! TTCAATTGCAATTTCAAATG+AGG + Chr3:85088036-85088055 None:intergenic 25.0%
!! AATCAAAGTCATGTTTTTCA+CGG - Chr3:85086245-85086264 MsG0380016554.01.T01:intron 25.0%
!! ACCAAATTCTTCAATTGTTT+TGG + Chr3:85083409-85083428 None:intergenic 25.0%
!! AGATTTTACTTATCTTTGGA+CGG - Chr3:85084574-85084593 MsG0380016554.01.T01:intron 25.0%
!! CAGCAATATAATAACCTTTT+CGG + Chr3:85083226-85083245 None:intergenic 25.0%
!! CTATATTTAGAATGAATGCA+CGG - Chr3:85087044-85087063 MsG0380016554.01.T01:intron 25.0%
!! TCATTTGAAATTGCAATTGA+AGG - Chr3:85088035-85088054 MsG0380016554.01.T01:intron 25.0%
!!! AGAGTTAATTTGTTAGGATA+TGG - Chr3:85087359-85087378 MsG0380016554.01.T01:intron 25.0%
!!! GACCTTTTTTTTATACATGA+TGG - Chr3:85083538-85083557 MsG0380016554.01.T01:intron 25.0%
!!! GAGTTAATTTGTTAGGATAT+GGG - Chr3:85087360-85087379 MsG0380016554.01.T01:intron 25.0%
!!! TAATCAAACTTGTTTTAGCA+GGG + Chr3:85084040-85084059 None:intergenic 25.0%
!!! TTAATCAAACTTGTTTTAGC+AGG + Chr3:85084041-85084060 None:intergenic 25.0%
!!! TTACCATCTAATTTTAACGA+TGG - Chr3:85083629-85083648 MsG0380016554.01.T01:intron 25.0%
!!! TTTTTTGAACCATTGTTGAA+AGG - Chr3:85085253-85085272 MsG0380016554.01.T01:intron 25.0%
!!! TTTTTTTGTGTTTAACCCTT+CGG + Chr3:85087883-85087902 None:intergenic 25.0%
AAAACAAAAGGAGGTGAAAT+GGG + Chr3:85083741-85083760 None:intergenic 30.0%
AAATTGAATGAGTTCTCACT+TGG + Chr3:85083854-85083873 None:intergenic 30.0%
AACAGACTGCATATTCAATT+AGG + Chr3:85087999-85088018 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG - Chr3:85084402-85084421 MsG0380016554.01.T01:intron 30.0%
AATAACATTCATTGCATTGC+AGG + Chr3:85083171-85083190 None:intergenic 30.0%
AATCAGCAATGACATACAAT+AGG + Chr3:85086800-85086819 None:intergenic 30.0%
AATCGATACTGATGTTTGAT+AGG - Chr3:85088357-85088376 MsG0380016554.01.T01:intron 30.0%
ACAATTGAAGAATTTGGTCA+AGG - Chr3:85083411-85083430 MsG0380016554.01.T01:intron 30.0%
ACAGACTGCATATTCAATTA+GGG + Chr3:85087998-85088017 None:intergenic 30.0%
AGCAATGACAAATCCAAAAT+AGG + Chr3:85088865-85088884 None:intergenic 30.0%
AGTGAAATTGAGAGAAACAT+AGG - Chr3:85084470-85084489 MsG0380016554.01.T01:intron 30.0%
AGTTATCACAGTAGCAATTT+AGG - Chr3:85087096-85087115 MsG0380016554.01.T01:intron 30.0%
ATAGGCATAAACATTCCAAA+TGG - Chr3:85088375-85088394 MsG0380016554.01.T01:intron 30.0%
ATCATTTGAGCATATTTGCT+TGG - Chr3:85085797-85085816 MsG0380016554.01.T01:intron 30.0%
ATTAACTCTACATCCTAACA+AGG + Chr3:85087348-85087367 None:intergenic 30.0%
CAAAACATATTCTACCAATC+CGG + Chr3:85087000-85087019 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG - Chr3:85084103-85084122 MsG0380016554.01.T01:intron 30.0%
CAATCAAATTCTTTCGTCTT+TGG - Chr3:85085762-85085781 MsG0380016554.01.T01:intron 30.0%
CACAAAGCTAAATATGAAGA+AGG - Chr3:85085210-85085229 MsG0380016554.01.T01:intron 30.0%
CAGTGACACAATTAAACATA+TGG - Chr3:85087291-85087310 MsG0380016554.01.T01:intron 30.0%
CAGTGCAGAAAAACAAAATT+AGG - Chr3:85084357-85084376 MsG0380016554.01.T01:intron 30.0%
CATCCATCGTTAAAATTAGA+TGG + Chr3:85083635-85083654 None:intergenic 30.0%
CCAGATTATCATATATCAGA+TGG - Chr3:85086911-85086930 MsG0380016554.01.T01:intron 30.0%
CCATCTGATATATGATAATC+TGG + Chr3:85086914-85086933 None:intergenic 30.0%
CTTTCATAGTGTTCTAATCT+TGG + Chr3:85084105-85084124 None:intergenic 30.0%
GAACCATAATAAGATATGGT+GGG + Chr3:85084703-85084722 None:intergenic 30.0%
GAATTCAACAAAACAAAAGG+AGG + Chr3:85083750-85083769 None:intergenic 30.0%
GAGGAAAAAAACTATCCATT+TGG + Chr3:85088393-85088412 None:intergenic 30.0%
GGTACTTGGTTTAATTACAA+TGG + Chr3:85087666-85087685 None:intergenic 30.0%
GTGTAAAATCTAATTGTGAG+AGG - Chr3:85084899-85084918 MsG0380016554.01.T01:intron 30.0%
GTTGTTTGTTTACGGTAATT+AGG + Chr3:85086224-85086243 None:intergenic 30.0%
TAAATTAAACGGTGTGAAAG+CGG + Chr3:85085932-85085951 None:intergenic 30.0%
TAAGATTGATGAACATGAGA+TGG - Chr3:85085648-85085667 MsG0380016554.01.T01:intron 30.0%
TAATAGTTGAACTTTGAGTG+TGG + Chr3:85086130-85086149 None:intergenic 30.0%
TAGAAAAAATCAACAGTCAG+AGG - Chr3:85085853-85085872 MsG0380016554.01.T01:intron 30.0%
TATCATCATGAAGTGAAACA+TGG + Chr3:85086674-85086693 None:intergenic 30.0%
TCAAAAGAAGAATTAGTTGG+AGG + Chr3:85088412-85088431 None:intergenic 30.0%
TCAAAATTGTTATGGAGAAC+TGG - Chr3:85088733-85088752 MsG0380016554.01.T01:intron 30.0%
TGAACCATAATAAGATATGG+TGG + Chr3:85084704-85084723 None:intergenic 30.0%
TGGAGTTAATGAGTTTGATT+TGG - Chr3:85085373-85085392 MsG0380016554.01.T01:intron 30.0%
TGGATAAAATGGCAATTTGA+AGG + Chr3:85087566-85087585 None:intergenic 30.0%
TGTGAGTATCTCATATGAAT+AGG - Chr3:85087410-85087429 MsG0380016554.01.T01:intron 30.0%
TGTGTAATGGTATAACTTAG+AGG - Chr3:85084857-85084876 MsG0380016554.01.T01:intron 30.0%
TTACAAGTCGCTATTCTATA+GGG + Chr3:85083951-85083970 None:intergenic 30.0%
TTGTATTCCGTACAATTTCT+AGG - Chr3:85088234-85088253 MsG0380016554.01.T01:intron 30.0%
! AAACGCATTTTTAAATGTGC+TGG - Chr3:85087263-85087282 MsG0380016554.01.T01:intron 30.0%
! AACGCATTTTTAAATGTGCT+GGG - Chr3:85087264-85087283 MsG0380016554.01.T01:intron 30.0%
! AGAATCTGAATTTGACTTCT+GGG - Chr3:85087783-85087802 MsG0380016554.01.T01:intron 30.0%
! ATAACCTTTTCGGATAAAGA+CGG + Chr3:85083216-85083235 None:intergenic 30.0%
! ATGAAATAAGTTTGGCGTTT+TGG + Chr3:85087586-85087605 None:intergenic 30.0%
! ATGAGTTATAACTTGCATAG+CGG - Chr3:85087532-85087551 MsG0380016554.01.T01:intron 30.0%
! ATTTTGTAACCAGGAAGAAA+TGG - Chr3:85088520-85088539 MsG0380016554.01.T01:intron 30.0%
! GGGATCAACTTTACTATTTT+GGG + Chr3:85086078-85086097 None:intergenic 30.0%
! GTACTCATCTTTACCTATTT+TGG - Chr3:85088849-85088868 MsG0380016554.01.T01:intron 30.0%
! TAATGTTTTCATTTCTCGGT+TGG - Chr3:85084544-85084563 MsG0380016554.01.T01:intron 30.0%
! TATTATTTCCAAGGCTTTTC+AGG - Chr3:85086692-85086711 MsG0380016554.01.T01:intron 30.0%
! TTAAGATTTTCGACCTTGTT+AGG - Chr3:85087332-85087351 MsG0380016554.01.T01:intron 30.0%
!! ATGAGTCGTTTTACTTTATC+AGG + Chr3:85083104-85083123 None:intergenic 30.0%
!! CACACCGTTTAATTTAGTTT+TGG - Chr3:85085936-85085955 MsG0380016554.01.T01:intron 30.0%
!! CTTCTTCATATTTAGCTTTG+TGG + Chr3:85085212-85085231 None:intergenic 30.0%
!! GGATGTAGAGTTAATTTGTT+AGG - Chr3:85087353-85087372 MsG0380016554.01.T01:intron 30.0%
!! GTGTGTTAGATTTTTCAGTA+TGG - Chr3:85083578-85083597 MsG0380016554.01.T01:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - Chr3:85084418-85084437 MsG0380016554.01.T01:intron 30.0%
!! TGTATCTGTAAAGTTGCTTT+TGG - Chr3:85087235-85087254 MsG0380016554.01.T01:intron 30.0%
!! TGTTTCTAGAGATCAAACAA+TGG + Chr3:85085103-85085122 None:intergenic 30.0%
!! TTAATGAGTTTGATTTGGTG+TGG - Chr3:85085378-85085397 MsG0380016554.01.T01:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - Chr3:85084417-85084436 MsG0380016554.01.T01:intron 30.0%
!!! AACTTGGACCATTTTTTTCA+TGG + Chr3:85085443-85085462 None:intergenic 30.0%
!!! ACTTTTTTCCTCTTGTTTTG+TGG - Chr3:85083787-85083806 MsG0380016554.01.T01:intron 30.0%
AACAGCCAATTCACAAAGAT+TGG - Chr3:85088325-85088344 MsG0380016554.01.T01:intron 35.0%
AACTGACATGTGTACTTGTA+CGG + Chr3:85087080-85087099 None:intergenic 35.0%
AATGAGACTATGAGAGGAAA+GGG + Chr3:85084751-85084770 None:intergenic 35.0%
AATGGCATGAGTTAATACGA+GGG + Chr3:85087648-85087667 None:intergenic 35.0%
ACAATCACCACAGTAAACAT+CGG + Chr3:85088632-85088651 None:intergenic 35.0%
ACATATGGGATATGTTGAGA+AGG - Chr3:85087306-85087325 MsG0380016554.01.T01:intron 35.0%
ACTAGTAACAATCGTTAGGT+AGG + Chr3:85086106-85086125 None:intergenic 35.0%
ACTTAGACCAATACTTTAGG+TGG + Chr3:85084647-85084666 None:intergenic 35.0%
AGTGACAACATTCATTGCAT+GGG + Chr3:85088563-85088582 None:intergenic 35.0%
AGTTGAATCCATCTAATTGG+TGG - Chr3:85085459-85085478 MsG0380016554.01.T01:intron 35.0%
ATGCAATGAATGTTGTCACT+GGG - Chr3:85088563-85088582 MsG0380016554.01.T01:intron 35.0%
CAAAACAAAAGGAGGTGAAA+TGG + Chr3:85083742-85083761 None:intergenic 35.0%
CAATTAGGGGTTAAACATGA+GGG + Chr3:85087984-85088003 None:intergenic 35.0%
CAGACTGCATATTCAATTAG+GGG + Chr3:85087997-85088016 None:intergenic 35.0%
CATCCCACCATATCTTATTA+TGG - Chr3:85084697-85084716 MsG0380016554.01.T01:intron 35.0%
CATCGTCTACAATGAATTTC+AGG - Chr3:85086756-85086775 MsG0380016554.01.T01:intron 35.0%
CCAACTTAGACCAATACTTT+AGG + Chr3:85084650-85084669 None:intergenic 35.0%
CTAAAGAGAAGGATGTCAAA+GGG + Chr3:85083312-85083331 None:intergenic 35.0%
CTACAACAGTTTCACATACA+CGG + Chr3:85087687-85087706 None:intergenic 35.0%
CTCGCAATTGATTAGAAGTT+AGG + Chr3:85086887-85086906 None:intergenic 35.0%
CTTACAAGTCGCTATTCTAT+AGG + Chr3:85083952-85083971 None:intergenic 35.0%
GAAACTGTTGTAGCAACAAA+AGG - Chr3:85087694-85087713 MsG0380016554.01.T01:intron 35.0%
GACAGGTTTACAATAGTAGT+TGG + Chr3:85087917-85087936 None:intergenic 35.0%
GATAAAGACGGACAAAATCA+AGG + Chr3:85083204-85083223 None:intergenic 35.0%
GATGGATGGTTTAAGCTATT+AGG - Chr3:85083556-85083575 MsG0380016554.01.T01:intron 35.0%
GGGTGAACCATAATAAGATA+TGG + Chr3:85084707-85084726 None:intergenic 35.0%
GTTTCTAATGGAAAGCTATC+AGG - Chr3:85083128-85083147 MsG0380016554.01.T01:CDS 35.0%
TAGTTTATATAGAGAGGGAC+AGG + Chr3:85087934-85087953 None:intergenic 35.0%
TATACCACCAAATCTTGCTA+TGG + Chr3:85085409-85085428 None:intergenic 35.0%
TATCAGATGGTTTCTGTTTG+TGG - Chr3:85086924-85086943 MsG0380016554.01.T01:intron 35.0%
TCAATTAGGGGTTAAACATG+AGG + Chr3:85087985-85088004 None:intergenic 35.0%
TGAAGAATTTGGTCAAGGAA+TGG - Chr3:85083416-85083435 MsG0380016554.01.T01:intron 35.0%
TGGAACTAGTAACAATCGTT+AGG + Chr3:85086110-85086129 None:intergenic 35.0%
TTTCATCACCACAAAACAAG+AGG + Chr3:85083798-85083817 None:intergenic 35.0%
! AGCAATGGCTCTGTTATAAA+AGG - Chr3:85088150-85088169 MsG0380016554.01.T01:intron 35.0%
! ATTTTCCTTCCTTGTACTTC+TGG + Chr3:85088699-85088718 None:intergenic 35.0%
! CAATGGCTCTGTTATAAAAG+GGG - Chr3:85088152-85088171 MsG0380016554.01.T01:intron 35.0%
! CATAATAAGATATGGTGGGA+TGG + Chr3:85084699-85084718 None:intergenic 35.0%
! CCAAGTTGAATCCATCTAAT+TGG - Chr3:85085456-85085475 MsG0380016554.01.T01:intron 35.0%
! CCAATTAGATGGATTCAACT+TGG + Chr3:85085459-85085478 None:intergenic 35.0%
! GAGAATCTGAATTTGACTTC+TGG - Chr3:85087782-85087801 MsG0380016554.01.T01:intron 35.0%
! GCAATGGCTCTGTTATAAAA+GGG - Chr3:85088151-85088170 MsG0380016554.01.T01:intron 35.0%
! GGGGATCAACTTTACTATTT+TGG + Chr3:85086079-85086098 None:intergenic 35.0%
! TGTTAGGATATGGGTTATGA+AGG - Chr3:85087369-85087388 MsG0380016554.01.T01:intron 35.0%
! TTTTCCTTCCTTGTACTTCT+GGG + Chr3:85088698-85088717 None:intergenic 35.0%
!! CCTAAAGTATTGGTCTAAGT+TGG - Chr3:85084647-85084666 MsG0380016554.01.T01:intron 35.0%
!! GATTTTGTTATGGGTAATGC+AGG - Chr3:85085013-85085032 MsG0380016554.01.T01:intron 35.0%
!! GTTTGGCGTTTTGGATAAAA+TGG + Chr3:85087577-85087596 None:intergenic 35.0%
!! TGATGGCTTGTATTTTGTGT+GGG + Chr3:85084727-85084746 None:intergenic 35.0%
!! TTGATGGCTTGTATTTTGTG+TGG + Chr3:85084728-85084747 None:intergenic 35.0%
!!! GTGAGGAGTCATTTTTAGTT+CGG - Chr3:85085326-85085345 MsG0380016554.01.T01:intron 35.0%
!!! TGAGGAGTCATTTTTAGTTC+GGG - Chr3:85085327-85085346 MsG0380016554.01.T01:intron 35.0%
!!! TTGTTTTGGTTGCTAGTGTA+AGG + Chr3:85083395-85083414 None:intergenic 35.0%
!!! TTTGCGATAATTTTTTGCGG+AGG - Chr3:85084237-85084256 MsG0380016554.01.T01:intron 35.0%
AAACTAAACGCACCCTTTGT+TGG - Chr3:85085485-85085504 MsG0380016554.01.T01:intron 40.0%
AACAATCGTTAGGTAGGTGA+AGG + Chr3:85086100-85086119 None:intergenic 40.0%
AACTATTACTGAACAGAGCC+AGG - Chr3:85086142-85086161 MsG0380016554.01.T01:intron 40.0%
ACAATCGTTAGGTAGGTGAA+GGG + Chr3:85086099-85086118 None:intergenic 40.0%
ACTCACCTTTACGATCGAAT+TGG - Chr3:85086539-85086558 MsG0380016554.01.T01:intron 40.0%
AGGGATGAGTTACAACACAA+GGG + Chr3:85087629-85087648 None:intergenic 40.0%
AGTGACCAATTCGATCGTAA+AGG + Chr3:85086547-85086566 None:intergenic 40.0%
AGTTTCACATACACGGTACT+TGG + Chr3:85087680-85087699 None:intergenic 40.0%
AGTTTGCACCACCAATTAGA+TGG + Chr3:85085470-85085489 None:intergenic 40.0%
ATATTTGCTTGGATAGAGCG+AGG - Chr3:85085808-85085827 MsG0380016554.01.T01:intron 40.0%
CAATGAGACTATGAGAGGAA+AGG + Chr3:85084752-85084771 None:intergenic 40.0%
CAATGGCAAGGATGTCTAAA+TGG + Chr3:85085086-85085105 None:intergenic 40.0%
CAATGGCATGAGTTAATACG+AGG + Chr3:85087649-85087668 None:intergenic 40.0%
CAGTGACAACATTCATTGCA+TGG + Chr3:85088564-85088583 None:intergenic 40.0%
CATGCAATGAATGTTGTCAC+TGG - Chr3:85088562-85088581 MsG0380016554.01.T01:intron 40.0%
CATTGCATGGGAAAACAGAA+AGG + Chr3:85088551-85088570 None:intergenic 40.0%
CCTAAAGAGAAGGATGTCAA+AGG + Chr3:85083313-85083332 None:intergenic 40.0%
CCTTTGACATCCTTCTCTTT+AGG - Chr3:85083310-85083329 MsG0380016554.01.T01:CDS 40.0%
CGACTCATGACAGTTTCTAA+TGG - Chr3:85083116-85083135 MsG0380016554.01.T01:CDS 40.0%
CTAGAGATCAAACAATGGCA+AGG + Chr3:85085098-85085117 None:intergenic 40.0%
GAATGATGCACGAAGAAATC+TGG + Chr3:85083355-85083374 None:intergenic 40.0%
GCAAGTTATAACTCATTCGC+AGG + Chr3:85087528-85087547 None:intergenic 40.0%
GCTCATTAACCAACTAAGCT+CGG + Chr3:85087739-85087758 None:intergenic 40.0%
GGTTTCTGTTTGTGGTACTA+GGG - Chr3:85086932-85086951 MsG0380016554.01.T01:intron 40.0%
GTTTGCAATGAGACTATGAG+AGG + Chr3:85084757-85084776 None:intergenic 40.0%
GTTTGGACCACCTAAAGTAT+TGG - Chr3:85084637-85084656 MsG0380016554.01.T01:intron 40.0%
TAAAATCACCCTCCAACAGA+TGG + Chr3:85084617-85084636 None:intergenic 40.0%
TAATGAAGGTCAGGTTAGAG+AGG - Chr3:85085878-85085897 MsG0380016554.01.T01:intron 40.0%
TATCAAGACCATCTGTTGGA+GGG - Chr3:85084606-85084625 MsG0380016554.01.T01:intron 40.0%
TCACTTCTAGTCACAACATG+AGG + Chr3:85088908-85088927 None:intergenic 40.0%
TCTCGCGAAAGATTCATCAT+TGG + Chr3:85087766-85087785 None:intergenic 40.0%
TGCTGCCAATCTTTGTGAAT+TGG + Chr3:85088333-85088352 None:intergenic 40.0%
TGGTTTCTGTTTGTGGTACT+AGG - Chr3:85086931-85086950 MsG0380016554.01.T01:intron 40.0%
TTATCTTTGGACGGAACTCT+CGG - Chr3:85084583-85084602 MsG0380016554.01.T01:intron 40.0%
TTCTCAAGCTAGCAATGAAC+TGG - Chr3:85085143-85085162 MsG0380016554.01.T01:intron 40.0%
TTGTCCGTCTTTATCCGAAA+AGG - Chr3:85083209-85083228 MsG0380016554.01.T01:CDS 40.0%
TTTGGATGTGCACAATGTAC+AGG - Chr3:85088824-85088843 MsG0380016554.01.T01:CDS 40.0%
TTTGTCTGCAGAGAAAGTGA+CGG - Chr3:85087153-85087172 MsG0380016554.01.T01:intron 40.0%
! AACAGTCAGAGGTGTAATGA+AGG - Chr3:85085864-85085883 MsG0380016554.01.T01:intron 40.0%
! AACTAAGCTCGGTTTGTTTG+CGG + Chr3:85087728-85087747 None:intergenic 40.0%
! AAGAGATGCCTGTCTTCTTT+TGG + Chr3:85088589-85088608 None:intergenic 40.0%
! AATGAATGCACGGATTGTAC+AGG - Chr3:85087054-85087073 MsG0380016554.01.T01:intron 40.0%
! AGAATCAAAAGGGTACAGAG+GGG - Chr3:85087433-85087452 MsG0380016554.01.T01:intron 40.0%
! AGCTTTGTGGTGTAACAGAA+AGG + Chr3:85085199-85085218 None:intergenic 40.0%
! ATCTGAATTTGACTTCTGGG+TGG - Chr3:85087786-85087805 MsG0380016554.01.T01:intron 40.0%
! GAGAATCAAAAGGGTACAGA+GGG - Chr3:85087432-85087451 MsG0380016554.01.T01:intron 40.0%
! TATGGAATGTTTTACCCGCT+TGG - Chr3:85083596-85083615 MsG0380016554.01.T01:intron 40.0%
!! TGAGTTTGATTTGGTGTGGA+TGG - Chr3:85085382-85085401 MsG0380016554.01.T01:intron 40.0%
!! TGCCTCTAAAATCACAGTGA+CGG + Chr3:85087204-85087223 None:intergenic 40.0%
!!! GTTGGAGGGTGATTTTAGTT+TGG - Chr3:85084620-85084639 MsG0380016554.01.T01:intron 40.0%
ACTGTTGCCGATGTTTACTG+TGG - Chr3:85088622-85088641 MsG0380016554.01.T01:intron 45.0%
AGTAAACATCGGCAACAGTG+TGG + Chr3:85088621-85088640 None:intergenic 45.0%
ATTAAACGGTGTGAAAGCGG+CGG + Chr3:85085929-85085948 None:intergenic 45.0%
ATTAGCTCGCAACCAAACTC+CGG - Chr3:85087830-85087849 MsG0380016554.01.T01:intron 45.0%
CAATCGTTAGGTAGGTGAAG+GGG + Chr3:85086098-85086117 None:intergenic 45.0%
CATGAGGGATGCATACAGAT+TGG + Chr3:85087969-85087988 None:intergenic 45.0%
CATGGGAAAACAGAAAGGCT+CGG + Chr3:85088546-85088565 None:intergenic 45.0%
CCTTCTCTTTAGGCACTTTG+AGG - Chr3:85083320-85083339 MsG0380016554.01.T01:CDS 45.0%
CGCGAAAGATTCATCATTGG+TGG + Chr3:85087763-85087782 None:intergenic 45.0%
CTATGAGAGGAAAGGGTTGA+TGG + Chr3:85084744-85084763 None:intergenic 45.0%
CTGTCAAAGATGATCGCTGA+GGG - Chr3:85083662-85083681 MsG0380016554.01.T01:intron 45.0%
GAGAGTTGCATTGAGAGAGA+TGG - Chr3:85085353-85085372 MsG0380016554.01.T01:intron 45.0%
GAGGGATGAGTTACAACACA+AGG + Chr3:85087630-85087649 None:intergenic 45.0%
GCAAACAAACCGAGCTTAGT+TGG - Chr3:85087727-85087746 MsG0380016554.01.T01:intron 45.0%
GGAGGTGAAATGGGAGAAAA+AGG + Chr3:85083732-85083751 None:intergenic 45.0%
GGATGGACCATAGCAAGATT+TGG - Chr3:85085399-85085418 MsG0380016554.01.T01:intron 45.0%
GGTAAACAATAGTGGCCAAG+CGG + Chr3:85083614-85083633 None:intergenic 45.0%
GGTTGCGAGCTAATAAAGTC+TGG + Chr3:85087824-85087843 None:intergenic 45.0%
GTAAACAATAGTGGCCAAGC+GGG + Chr3:85083613-85083632 None:intergenic 45.0%
GTATCAAGACCATCTGTTGG+AGG - Chr3:85084605-85084624 MsG0380016554.01.T01:intron 45.0%
GTCATAGCCTCTCCAACAAA+GGG + Chr3:85085500-85085519 None:intergenic 45.0%
TCGGTATCAAGACCATCTGT+TGG - Chr3:85084602-85084621 MsG0380016554.01.T01:intron 45.0%
TGAGTTACAACACAAGGGAG+AGG + Chr3:85087624-85087643 None:intergenic 45.0%
TGGACCATAGCAAGATTTGG+TGG - Chr3:85085402-85085421 MsG0380016554.01.T01:intron 45.0%
TTGGGTTACCTGAAAAGCCT+TGG + Chr3:85086703-85086722 None:intergenic 45.0%
! CCTCAAAGTGCCTAAAGAGA+AGG + Chr3:85083323-85083342 None:intergenic 45.0%
! GAAGTACGAAAGAGCGTATG+AGG - Chr3:85088669-85088688 MsG0380016554.01.T01:intron 45.0%
! GACCGTCACTGTGATTTTAG+AGG - Chr3:85087199-85087218 MsG0380016554.01.T01:intron 45.0%
! GGAGAATCAAAAGGGTACAG+AGG - Chr3:85087431-85087450 MsG0380016554.01.T01:intron 45.0%
! GTTTAACCCTTCGGTTCGTA+GGG + Chr3:85087874-85087893 None:intergenic 45.0%
! TCAGAGGTGTAATGAAGGTC+AGG - Chr3:85085869-85085888 MsG0380016554.01.T01:intron 45.0%
! TGTTTAACCCTTCGGTTCGT+AGG + Chr3:85087875-85087894 None:intergenic 45.0%
! TTTAACCCTTCGGTTCGTAG+GGG + Chr3:85087873-85087892 None:intergenic 45.0%
!! TTAACAAAAAAAAAAAAAAA+TGG + Chr3:85086732-85086751 None:intergenic 5.0%
!!! ATATAAGAAATTTTTTTTAT+AGG + Chr3:85084011-85084030 None:intergenic 5.0%
!!! ATTTTTTTTTTTTTTTGTTA+AGG - Chr3:85086731-85086750 MsG0380016554.01.T01:intron 5.0%
!!! TATAAGAAATTTTTTTTATA+GGG + Chr3:85084010-85084029 None:intergenic 5.0%
AAACATCGGCAACAGTGTGG+AGG + Chr3:85088618-85088637 None:intergenic 50.0%
AAACGCACCCTTTGTTGGAG+AGG - Chr3:85085490-85085509 MsG0380016554.01.T01:intron 50.0%
ATCTGTGAAGTTCGGTCGTG+AGG - Chr3:85085708-85085727 MsG0380016554.01.T01:intron 50.0%
GAAGACAGGCATCTCTTGAC+TGG - Chr3:85088592-85088611 MsG0380016554.01.T01:intron 50.0%
GAGAAGGATGTCAAAGGGAG+AGG + Chr3:85083307-85083326 None:intergenic 50.0%
GCTGTCAAAGATGATCGCTG+AGG - Chr3:85083661-85083680 MsG0380016554.01.T01:intron 50.0%
GGTCATAGCCTCTCCAACAA+AGG + Chr3:85085501-85085520 None:intergenic 50.0%
TCACTGGGCCAAAAGAAGAC+AGG - Chr3:85088578-85088597 MsG0380016554.01.T01:intron 50.0%
TGAAGTTCGGTCGTGAGGTA+AGG - Chr3:85085713-85085732 MsG0380016554.01.T01:intron 50.0%
TGGGGAACAAAGCTGCAGAA+GGG + Chr3:85088766-85088785 None:intergenic 50.0%
TGGTGATTGTCGTGAAGTGC+TGG - Chr3:85088642-85088661 MsG0380016554.01.T01:intron 50.0%
TTACAGCAGCAGTACAAGCG+AGG + Chr3:85086642-85086661 None:intergenic 50.0%
TTGGGGAACAAAGCTGCAGA+AGG + Chr3:85088767-85088786 None:intergenic 50.0%
! GGTGATTGTCGTGAAGTGCT+GGG - Chr3:85088643-85088662 MsG0380016554.01.T01:intron 50.0%
!! ATTGTCGTGAAGTGCTGGGT+TGG - Chr3:85088647-85088666 MsG0380016554.01.T01:intron 50.0%
AAGGCTCGGCCATTTCTTCC+TGG + Chr3:85088532-85088551 None:intergenic 55.0%
ACCTGAGTCTGAGCGTTACC+TGG + Chr3:85086163-85086182 None:intergenic 55.0%
AGGTCAGGTTAGAGAGGCAG+CGG - Chr3:85085884-85085903 MsG0380016554.01.T01:intron 55.0%
CAATCCACGCGCAACTCTTG+CGG - Chr3:85088099-85088118 MsG0380016554.01.T01:intron 55.0%
GCGCGTAGTGATATTCGCGT+TGG - Chr3:85085987-85086006 MsG0380016554.01.T01:intron 55.0%
GGCGCTAGTATTCCGGAGTT+TGG + Chr3:85087845-85087864 None:intergenic 55.0%
GTGTGAAAGCGGCGGAATCT+CGG + Chr3:85085921-85085940 None:intergenic 55.0%
TCACTACGCGCGTGTTTGAG+TGG + Chr3:85085978-85085997 None:intergenic 55.0%
! GCGTCCCAGAAGTACAAGGA+AGG - Chr3:85088691-85088710 MsG0380016554.01.T01:intron 55.0%
! TGAGGCGTCCCAGAAGTACA+AGG - Chr3:85088687-85088706 MsG0380016554.01.T01:intron 55.0%
ATGACCGCAAGAGTTGCGCG+TGG + Chr3:85088106-85088125 None:intergenic 60.0%
CCTCTCCCCTACGAACCGAA+GGG - Chr3:85087865-85087884 MsG0380016554.01.T01:intron 60.0%
GCCAGGTAACGCTCAGACTC+AGG - Chr3:85086159-85086178 MsG0380016554.01.T01:intron 60.0%
! CCTTCGGTTCGTAGGGGAGA+GGG + Chr3:85087867-85087886 None:intergenic 60.0%
! CTTCGGTTCGTAGGGGAGAG+GGG + Chr3:85087866-85087885 None:intergenic 60.0%
!! GGAGAGGGGCGCTAGTATTC+CGG + Chr3:85087852-85087871 None:intergenic 60.0%
CCCTCTCCCCTACGAACCGA+AGG - Chr3:85087864-85087883 MsG0380016554.01.T01:intron 65.0%
! CCCTTCGGTTCGTAGGGGAG+AGG + Chr3:85087868-85087887 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 85083000 85088944 85083000 ID=MsG0380016554.01;Name=MsG0380016554.01
Chr3 mRNA 85083000 85088944 85083000 ID=MsG0380016554.01.T01;Parent=MsG0380016554.01;Name=MsG0380016554.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0.75|0.8|1|0.5|0.4|5|23|152
Chr3 exon 85083000 85083411 85083000 ID=MsG0380016554.01.T01:exon:14454;Parent=MsG0380016554.01.T01
Chr3 exon 85088795 85088849 85088795 ID=MsG0380016554.01.T01:exon:14453;Parent=MsG0380016554.01.T01
Chr3 exon 85088930 85088944 85088930 ID=MsG0380016554.01.T01:exon:14452;Parent=MsG0380016554.01.T01
Chr3 CDS 85088930 85088944 85088930 ID=MsG0380016554.01.T01:cds;Parent=MsG0380016554.01.T01
Chr3 CDS 85088795 85088849 85088795 ID=MsG0380016554.01.T01:cds;Parent=MsG0380016554.01.T01
Chr3 CDS 85083023 85083411 85083023 ID=MsG0380016554.01.T01:cds;Parent=MsG0380016554.01.T01
Chr3 three_prime_UTR 85083000 85083022 85083000 ID=MsG0380016554.01.T01:three_prime_utr;Parent=MsG0380016554.01.T01
Gene Sequence

>MsG0380016554.01.T01

ATGGTTGACAAGGAGTTGCAACCTGATAAAGTAAAACGACTCATGACAGTTTCTAATGGAAAGCTATCAGGAAGAAATGGCCGAGCCTTTCTGTTTTCCCATGCAATGAATGTTGTCACTGGGCCAAAAGAAGACAGGCATCTCTTGACTGGCCTCCACACTGTTGCCGATGTTTACTGTGGTGATTGTCGTGAAGTGCTGGGTTGGAAGTACGAAAGAGCGTATGAGGCGTCCCAGAAGTACAAGGAAGGAAAATTCATTCTTGAAAAGTCAAAATTGTTATGGAGAACTGGTAGCATTCCCTTCTGCAGCTTTGTTCCCCAATCCATTCATTTTATTTATGATGTAGATTTATTCATGCTTTGGATGTGCACAATGTACAGGAAGTACTCATCTTTACCTATTTTGGATTTGTCATTGCTTATCCAATTTCATTATATTTCCTCATGTTGTGACTAG
Protein sequence

>MsG0380016554.01.T01

MVDKELQPDKVKRLMTVSNGKLSGRNGRAFLFSHAMNVVTGPKEDRHLLTGLHTVADVYCGDCREVLGWKYERAYEASQKYKEGKFILEKSKLLWRTGSIPFCSFVPQSIHFIYDVDLFMLWMCTMYRKYSSLPILDLSLLIQFHYISSCCD*