AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029189.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029189.01.T01 MTR_5g082490 89.720 107 11 0 85 191 23 129 1.29e-66 200
MsG0580029189.01.T01 MTR_3g070330 71.698 106 30 0 85 190 46 151 6.27e-52 164
MsG0580029189.01.T01 MTR_3g070330 76.250 80 19 0 85 164 46 125 3.36e-40 133
MsG0580029189.01.T01 MTR_7g068250 68.235 85 27 0 91 175 29 113 5.11e-38 127
MsG0580029189.01.T01 MTR_2g078670 50.495 101 50 0 91 191 29 129 1.02e-29 106
MsG0580029189.01.T01 MTR_8g058785 59.740 77 31 0 91 167 29 105 1.44e-28 103
MsG0580029189.01.T01 MTR_8g061270 59.740 77 31 0 91 167 29 105 1.44e-28 103
MsG0580029189.01.T01 MTR_5g063210 49.573 117 39 2 1 104 23 132 9.86e-27 101
MsG0580029189.01.T01 MTR_8g027255 53.247 77 36 0 91 167 25 101 1.66e-26 97.8
MsG0580029189.01.T01 MTR_4g088505 55.844 77 34 0 91 167 29 105 2.69e-26 97.8
MsG0580029189.01.T01 MTR_3g091840 51.948 77 37 0 91 167 25 101 2.63e-25 94.7
MsG0580029189.01.T01 MTR_7g075890 73.529 68 16 1 27 94 27 92 1.54e-24 100
MsG0580029189.01.T01 MTR_1g077750 43.284 67 38 0 91 157 25 91 1.63e-18 77.0
MsG0580029189.01.T01 MTR_3g084080 64.407 59 21 0 35 93 33 91 3.67e-18 77.4
MsG0580029189.01.T01 MTR_1g077760 51.852 54 26 0 110 163 1 54 4.00e-16 71.6
MsG0580029189.01.T01 MTR_4g088505 52.727 55 26 0 91 145 29 83 2.62e-15 69.3
MsG0580029189.01.T01 MTR_3g099630 56.452 62 27 0 34 95 80 141 1.11e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029189.01.T01 AT2G40110 72.222 108 29 1 85 191 23 130 7.30e-52 163
MsG0580029189.01.T01 AT3G11230 67.327 101 33 0 91 191 29 129 5.72e-45 145
MsG0580029189.01.T01 AT3G11230 67.327 101 33 0 91 191 62 162 8.24e-45 146
MsG0580029189.01.T01 AT2G40110 72.840 81 22 0 85 165 23 103 7.88e-39 129
MsG0580029189.01.T01 AT3G55890 61.386 101 31 1 91 191 29 121 2.65e-38 128
MsG0580029189.01.T01 AT3G55890 61.386 101 31 1 91 191 29 121 2.65e-38 128
MsG0580029189.01.T01 AT3G08990 64.706 85 30 0 91 175 29 113 5.33e-36 122
MsG0580029189.01.T01 AT3G08990 64.706 85 30 0 91 175 29 113 5.33e-36 122
MsG0580029189.01.T01 AT3G08990 64.706 85 30 0 91 175 29 113 5.33e-36 122
MsG0580029189.01.T01 AT5G53940 54.455 101 46 0 91 191 29 129 7.25e-34 117
MsG0580029189.01.T01 AT3G11230 72.000 75 21 0 91 165 29 103 3.13e-33 115
MsG0580029189.01.T01 AT3G11230 72.973 74 20 0 91 164 62 135 4.32e-33 115
MsG0580029189.01.T01 AT3G55890 68.493 73 23 0 91 163 29 101 3.00e-32 112
MsG0580029189.01.T01 AT3G55890 68.493 73 23 0 91 163 29 101 3.00e-32 112
MsG0580029189.01.T01 AT4G27745 49.425 87 44 0 85 171 19 105 2.77e-26 97.4
MsG0580029189.01.T01 AT4G27745 49.425 87 44 0 85 171 19 105 2.77e-26 97.4
MsG0580029189.01.T01 AT4G27745 49.425 87 44 0 85 171 19 105 2.77e-26 97.4
MsG0580029189.01.T01 AT4G27745 49.425 87 44 0 85 171 19 105 2.77e-26 97.4
MsG0580029189.01.T01 AT2G40110 65.574 61 21 0 85 145 23 83 3.33e-24 91.7
MsG0580029189.01.T01 AT2G40110 65.574 61 21 0 85 145 23 83 3.33e-24 91.7
MsG0580029189.01.T01 AT4G27740 35.897 78 50 0 91 168 25 102 5.45e-14 65.5

Find 51 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCGTGGGATTAGGGTTC+TGG 0.170016 5:-93411208 MsG0580029189.01.T01:CDS
GTCCTGATGGCAGCAATTAT+TGG 0.259271 5:-93406832 MsG0580029189.01.T01:CDS
TACAGTGTGAATGTTTCTAT+TGG 0.322176 5:-93407353 MsG0580029189.01.T01:intron
CCGTACACCATAACATTTGC+AGG 0.361564 5:+93411278 None:intergenic
TTGACCAGGTTCAAGGTGTC+TGG 0.365136 5:-93406854 MsG0580029189.01.T01:intron
TCCTGATGGCAGCAATTATT+GGG 0.368015 5:-93406831 MsG0580029189.01.T01:CDS
TGTTTCTATTGGAGAATTAG+AGG 0.372709 5:-93407342 MsG0580029189.01.T01:CDS
ACAGGACACGCCTCATCAAT+AGG 0.405797 5:+93411493 None:intergenic
AAATCATAACACGATATCTA+AGG 0.418788 5:+93411524 None:intergenic
ACTCGTGGGATTAGGGTTCT+GGG 0.433005 5:-93411207 MsG0580029189.01.T01:CDS
CATGCAAGTGTGGACTTGAC+CGG 0.438604 5:-93411239 MsG0580029189.01.T01:CDS
ACCCAATAATTGCTGCCATC+AGG 0.450327 5:+93406830 None:intergenic
ACTTAGGCCTGCAAATGTTA+TGG 0.456589 5:-93411285 MsG0580029189.01.T01:CDS
CAAGGATAACTTACACCTTA+CGG 0.472783 5:+93407640 None:intergenic
GAGGACAGAAATATGATGAC+TGG 0.475545 5:-93407323 MsG0580029189.01.T01:CDS
TTGATGAGGCGTGTCCTGTT+TGG 0.478037 5:-93411489 MsG0580029189.01.T01:CDS
ATGCAAGTGTGGACTTGACC+GGG 0.491068 5:-93411238 MsG0580029189.01.T01:CDS
TTCAAGGTGTCTGGTCCTGA+TGG 0.507863 5:-93406845 MsG0580029189.01.T01:CDS
GGCGTGTCCTGTTTGGCGTA+AGG 0.510225 5:-93411482 MsG0580029189.01.T01:CDS
AGGCACGCCTTACGCCAAAC+AGG 0.512722 5:+93411475 None:intergenic
CAGGCTTTCCACAGCAGACA+TGG 0.524156 5:-93407678 MsG0580029189.01.T01:CDS
ATGCAACACATGGTGTTGAA+AGG 0.525504 5:-93406802 MsG0580029189.01.T01:CDS
TTCACTATTTCCTATTGATG+AGG 0.528896 5:-93411503 MsG0580029189.01.T01:CDS
GTCGGTTGTGGATCAATCCT+CGG 0.549786 5:-93407272 MsG0580029189.01.T01:CDS
TGCAACACATGGTGTTGAAA+GGG 0.554699 5:-93406801 MsG0580029189.01.T01:CDS
TTTCAACACCATGTGTTGCA+TGG 0.554979 5:+93406804 None:intergenic
AAAAGCCAGAAGTACAAAGA+AGG 0.556508 5:-93407148 MsG0580029189.01.T01:CDS
GACGAAGGTATCAATGAAGA+AGG 0.561951 5:-93411354 MsG0580029189.01.T01:CDS
TTTCCACAGCAGACATGGGA+AGG 0.566067 5:-93407673 MsG0580029189.01.T01:CDS
CCTGCAAATGTTATGGTGTA+CGG 0.576363 5:-93411278 MsG0580029189.01.T01:CDS
GTTGTGGATCAATCCTCGGT+TGG 0.576717 5:-93407268 MsG0580029189.01.T01:CDS
ATGGTGTACGGATGGGTAGG+AGG 0.578359 5:-93411266 MsG0580029189.01.T01:CDS
GTTATGGTGTACGGATGGGT+AGG 0.588177 5:-93411269 MsG0580029189.01.T01:CDS
TAGATAAAAGATCTACACTT+AGG 0.592597 5:-93411301 MsG0580029189.01.T01:CDS
CAAATGTTATGGTGTACGGA+TGG 0.597210 5:-93411274 MsG0580029189.01.T01:CDS
AGGCTTTCCACAGCAGACAT+GGG 0.597650 5:-93407677 MsG0580029189.01.T01:CDS
AAGCCTTCCCATGTCTGCTG+TGG 0.600078 5:+93407670 None:intergenic
TGGGTTAGCCATGCAACACA+TGG 0.601436 5:-93406812 MsG0580029189.01.T01:CDS
AAGGAAAATCTGTTCTCGAA+CGG 0.607460 5:-93407129 MsG0580029189.01.T01:intron
AGGACAGAAATATGATGACT+GGG 0.607783 5:-93407322 MsG0580029189.01.T01:CDS
AGGAGGTAAACATGCAAGTG+TGG 0.610343 5:-93411249 MsG0580029189.01.T01:CDS
AGGATAGTATTATACACCAC+TGG 0.618707 5:+93411544 None:intergenic
TGTTATATTCAGGTGGACGA+AGG 0.625351 5:-93411369 MsG0580029189.01.T01:intron
GAAGGCTTATCTCTTCCGTA+AGG 0.633340 5:-93407655 MsG0580029189.01.T01:CDS
AGGTCAGCATATGTCGCCAG+TGG 0.655503 5:-93411560 None:intergenic
TGCAAGTGTGGACTTGACCG+GGG 0.661535 5:-93411237 MsG0580029189.01.T01:CDS
GAAGGTATCAATGAAGAAGG+AGG 0.680676 5:-93411351 MsG0580029189.01.T01:CDS
AAATGTTATGGTGTACGGAT+GGG 0.681282 5:-93411273 MsG0580029189.01.T01:CDS
GTCTTACATATGTCCAACCG+AGG 0.682634 5:+93407255 None:intergenic
GATGACTGGGATGCATACTG+TGG 0.714746 5:-93407309 MsG0580029189.01.T01:CDS
TCCCACGAGTGACAAAACCC+CGG 0.724693 5:+93411220 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGTGAATTTATAAATTA+GGG - Chr5:93409501-93409520 MsG0580029189.01.T01:intron 10.0%
!! TTAAAGTGAATTTATAAATT+AGG - Chr5:93409500-93409519 MsG0580029189.01.T01:intron 10.0%
!!! AGAAAATTTTATTTTGATAT+GGG - Chr5:93407565-93407584 MsG0580029189.01.T01:intron 10.0%
!!! TTCTGTTTTATTAATTTTAT+GGG - Chr5:93407986-93408005 MsG0580029189.01.T01:intron 10.0%
!!! TTTCTGTTTTATTAATTTTA+TGG - Chr5:93407985-93408004 MsG0580029189.01.T01:intron 10.0%
!! AAAAAGGTTAAAGAAAATAA+GGG - Chr5:93407588-93407607 MsG0580029189.01.T01:intron 15.0%
!! AAAGTGAATTTATAAATTAG+GGG - Chr5:93409502-93409521 MsG0580029189.01.T01:intron 15.0%
!! AATAAGTAAAGATAAACAAT+CGG - Chr5:93409406-93409425 MsG0580029189.01.T01:intron 15.0%
!! ATATGAAACCAATAATATAA+CGG + Chr5:93410349-93410368 None:intergenic 15.0%
!! TATAAAAGGAAACATTATAT+TGG - Chr5:93408048-93408067 MsG0580029189.01.T01:intron 15.0%
!! TCATAAAAAACATCAAAATT+GGG + Chr5:93408735-93408754 None:intergenic 15.0%
!!! AAATATCATTTTTTGTCAAT+AGG + Chr5:93407740-93407759 None:intergenic 15.0%
!!! AACTTTTTCTTAATGTTTAA+CGG - Chr5:93410542-93410561 MsG0580029189.01.T01:intron 15.0%
!!! AATTTTCTTAGTTGAATTAT+GGG - Chr5:93408591-93408610 MsG0580029189.01.T01:intron 15.0%
!!! ATTGATAATAATTAGAACAA+GGG - Chr5:93411337-93411356 MsG0580029189.01.T01:CDS 15.0%
!!! ATTTGGTTTATAACAATTTA+GGG - Chr5:93409212-93409231 MsG0580029189.01.T01:intron 15.0%
!!! GAGAAAATTTTATTTTGATA+TGG - Chr5:93407564-93407583 MsG0580029189.01.T01:intron 15.0%
!!! TATTTGGTTTATAACAATTT+AGG - Chr5:93409211-93409230 MsG0580029189.01.T01:intron 15.0%
!!! TTTAAGTTTTTGTTTATGTT+TGG - Chr5:93408769-93408788 MsG0580029189.01.T01:intron 15.0%
!! AATAACCAATAAAGAAATGT+CGG + Chr5:93410583-93410602 None:intergenic 20.0%
!! AATGATATATCCATTTAATC+AGG + Chr5:93410477-93410496 None:intergenic 20.0%
!! AGTCAAATATAAATCACAAA+AGG + Chr5:93408492-93408511 None:intergenic 20.0%
!! ATATGTATATATATTCTGAC+TGG - Chr5:93410609-93410628 MsG0580029189.01.T01:intron 20.0%
!! ATGATGTAAAAGTCATTAAT+TGG - Chr5:93407937-93407956 MsG0580029189.01.T01:intron 20.0%
!! ATTAATTACACATGAATAGA+AGG + Chr5:93407420-93407439 None:intergenic 20.0%
!! CAAATTCGTTAAAAACAAAA+AGG - Chr5:93407792-93407811 MsG0580029189.01.T01:intron 20.0%
!! CATTAAGAAAAAGTTGAATT+TGG + Chr5:93410537-93410556 None:intergenic 20.0%
!! CTCATAAAAAACATCAAAAT+TGG + Chr5:93408736-93408755 None:intergenic 20.0%
!! GAAAAAGGTTAAAGAAAATA+AGG - Chr5:93407587-93407606 MsG0580029189.01.T01:intron 20.0%
!! GTCAAATATAAATCACAAAA+GGG + Chr5:93408491-93408510 None:intergenic 20.0%
!! TAAGCATTTATAAATTTCCA+AGG + Chr5:93409810-93409829 None:intergenic 20.0%
!! TTCGTCAAGTAATAAAATTA+GGG + Chr5:93408190-93408209 None:intergenic 20.0%
!! TTTCGTCAAGTAATAAAATT+AGG + Chr5:93408191-93408210 None:intergenic 20.0%
!!! ACTTTTTCTCTATTTCTTTA+AGG + Chr5:93407493-93407512 None:intergenic 20.0%
!!! ACTTTTTCTTAATGTTTAAC+GGG - Chr5:93410543-93410562 MsG0580029189.01.T01:intron 20.0%
!!! CATTGATAATAATTAGAACA+AGG - Chr5:93411336-93411355 MsG0580029189.01.T01:CDS 20.0%
!!! CTTTTATGTAGACTTAATAT+AGG + Chr5:93407892-93407911 None:intergenic 20.0%
!!! GAATTTTCTTAGTTGAATTA+TGG - Chr5:93408590-93408609 MsG0580029189.01.T01:intron 20.0%
!!! TAATTTTATTACTTGACGAA+AGG - Chr5:93408190-93408209 MsG0580029189.01.T01:intron 20.0%
!!! TACTTTGTCATTTTATGTTA+TGG + Chr5:93407851-93407870 None:intergenic 20.0%
!!! TGCTATTAACTAAAACTTTT+TGG - Chr5:93409893-93409912 MsG0580029189.01.T01:intron 20.0%
!!! TTTACTTAACACAACTTTTA+GGG + Chr5:93407174-93407193 None:intergenic 20.0%
!!! TTTATTTTGATATGGGAAAA+AGG - Chr5:93407572-93407591 MsG0580029189.01.T01:intron 20.0%
!!! TTTTCAAAGAAAGAGAAAAA+GGG - Chr5:93407513-93407532 MsG0580029189.01.T01:intron 20.0%
!!! TTTTTCAAAGAAAGAGAAAA+AGG - Chr5:93407512-93407531 MsG0580029189.01.T01:intron 20.0%
! AAAAGTTGTGTTAAGTAAAG+TGG - Chr5:93407175-93407194 MsG0580029189.01.T01:intron 25.0%
! AAATCATAACACGATATCTA+AGG + Chr5:93406813-93406832 None:intergenic 25.0%
! AAGTATATAAGCCTACAAAT+AGG - Chr5:93407866-93407885 MsG0580029189.01.T01:intron 25.0%
! ACCTTATACATATAGTTCAA+AGG - Chr5:93407289-93407308 MsG0580029189.01.T01:CDS 25.0%
! ACTGGATAAGGAATTATAAA+AGG - Chr5:93408034-93408053 MsG0580029189.01.T01:intron 25.0%
! ACTTTAGATTACTAACTACA+AGG + Chr5:93410828-93410847 None:intergenic 25.0%
! AGACAGTTAAAGAACAAAAA+TGG + Chr5:93408544-93408563 None:intergenic 25.0%
! AGATGAAAGACAATAACATA+AGG + Chr5:93409751-93409770 None:intergenic 25.0%
! ATAATCACAGTTTCAGTTTA+TGG - Chr5:93409164-93409183 MsG0580029189.01.T01:intron 25.0%
! ATGCAGAACAAAAGATTAAA+GGG + Chr5:93410796-93410815 None:intergenic 25.0%
! ATTGTTATGTTTACGAGAAT+TGG - Chr5:93407348-93407367 MsG0580029189.01.T01:CDS 25.0%
! CCTTATACATATAGTTCAAA+GGG - Chr5:93407290-93407309 MsG0580029189.01.T01:CDS 25.0%
! TAGATAAAAGATCTACACTT+AGG - Chr5:93407033-93407052 MsG0580029189.01.T01:intron 25.0%
! TTGAAACTTCAACAAAACTA+CGG + Chr5:93408828-93408847 None:intergenic 25.0%
! TTTCAAAGAAAGAGAAAAAG+GGG - Chr5:93407514-93407533 MsG0580029189.01.T01:intron 25.0%
!! AAACCATTCTATTCAGATTT+TGG - Chr5:93410390-93410409 MsG0580029189.01.T01:intron 25.0%
!! ACAGTTATGTTTTTCTTTCA+TGG - Chr5:93410858-93410877 MsG0580029189.01.T01:intron 25.0%
!! CTTTACTTAACACAACTTTT+AGG + Chr5:93407175-93407194 None:intergenic 25.0%
!! GTTAGTAATCTAAAGTGTAA+AGG - Chr5:93410832-93410851 MsG0580029189.01.T01:intron 25.0%
!!! ATGCTTAAGCACTTTTATTT+CGG + Chr5:93409537-93409556 None:intergenic 25.0%
!!! ATTTCTTTAAGGTAGTGTAT+TGG + Chr5:93407482-93407501 None:intergenic 25.0%
!!! ATTTGTAATTTGTTTTGCTG+TGG - Chr5:93409132-93409151 MsG0580029189.01.T01:intron 25.0%
!!! TATAAGTGACCAAGTTTTTT+AGG - Chr5:93410451-93410470 MsG0580029189.01.T01:intron 25.0%
AAAACGTTGAATGTTACCTT+TGG + Chr5:93408439-93408458 None:intergenic 30.0%
ACTAACTGCAAAACATAATG+CGG + Chr5:93410916-93410935 None:intergenic 30.0%
AGACAATAACATAAGGTTGA+AGG + Chr5:93409744-93409763 None:intergenic 30.0%
AGTACATACATGACTTTGTT+AGG - Chr5:93406932-93406951 MsG0580029189.01.T01:intron 30.0%
ATGGTAAAACCAAAGTTATC+AGG + Chr5:93410749-93410768 None:intergenic 30.0%
ATGGTCGGAAATTAAAGTTA+TGG - Chr5:93409367-93409386 MsG0580029189.01.T01:intron 30.0%
ATTGTGTTAAGGTACACAAA+TGG - Chr5:93409348-93409367 MsG0580029189.01.T01:intron 30.0%
CATCATCAATGTTGTAAATC+TGG + Chr5:93407923-93407942 None:intergenic 30.0%
CCCTTTGAACTATATGTATA+AGG + Chr5:93407293-93407312 None:intergenic 30.0%
CTACAATCATTAATGCAACA+TGG + Chr5:93408275-93408294 None:intergenic 30.0%
CTTAATATAGGCCTATTTGT+AGG + Chr5:93407880-93407899 None:intergenic 30.0%
GAACCAAAATCTGAATAGAA+TGG + Chr5:93410396-93410415 None:intergenic 30.0%
GAATTTATAAATTAGGGGTG+AGG - Chr5:93409507-93409526 MsG0580029189.01.T01:intron 30.0%
GATGCAGAACAAAAGATTAA+AGG + Chr5:93410797-93410816 None:intergenic 30.0%
GTACATACATGACTTTGTTA+GGG - Chr5:93406933-93406952 MsG0580029189.01.T01:intron 30.0%
GTCATTAATTGGATTTACAC+TGG - Chr5:93407948-93407967 MsG0580029189.01.T01:intron 30.0%
GTGAATTATGTAGATTGTAG+AGG + Chr5:93410181-93410200 None:intergenic 30.0%
TCGAAACTTCAACAAAACTA+TGG + Chr5:93409026-93409045 None:intergenic 30.0%
TCTCGTAAACATAACAATCA+TGG + Chr5:93407346-93407365 None:intergenic 30.0%
TGAAAGTGAAAAGTTGTATG+TGG - Chr5:93407642-93407661 MsG0580029189.01.T01:intron 30.0%
TGGTTTCATATATTTCACAG+AGG - Chr5:93410358-93410377 MsG0580029189.01.T01:intron 30.0%
TGTACTTCAGAATTAGACAA+TGG + Chr5:93410070-93410089 None:intergenic 30.0%
TTAAGGTAGTGTATTGGATT+AGG + Chr5:93407476-93407495 None:intergenic 30.0%
TTAATCAGGCCTAAAAAACT+TGG + Chr5:93410463-93410482 None:intergenic 30.0%
TTCAAAGAAAGAGAAAAAGG+GGG - Chr5:93407515-93407534 MsG0580029189.01.T01:intron 30.0%
TTCACTATTTCCTATTGATG+AGG - Chr5:93406831-93406850 MsG0580029189.01.T01:CDS 30.0%
TTGTTATAGTTTCGACGATT+AGG - Chr5:93408932-93408951 MsG0580029189.01.T01:intron 30.0%
TTGTTGAAGTTTCAACGATT+AGG - Chr5:93408833-93408852 MsG0580029189.01.T01:intron 30.0%
TTTCAGTTTATGGTGATAGT+TGG - Chr5:93409174-93409193 MsG0580029189.01.T01:intron 30.0%
TTTGTGTACCAATACACAAA+TGG + Chr5:93409681-93409700 None:intergenic 30.0%
! ATGTTTTTCTTTCATGGCTT+TGG - Chr5:93410864-93410883 MsG0580029189.01.T01:intron 30.0%
! ATTTTCCTTCTTTGTACTTC+TGG + Chr5:93411194-93411213 None:intergenic 30.0%
! CTTTTGTTCTGCATCATTTT+GGG - Chr5:93410802-93410821 MsG0580029189.01.T01:intron 30.0%
! GTGTAGATCTTTTATCTAGT+AGG + Chr5:93407031-93407050 None:intergenic 30.0%
! TACAGTGTGAATGTTTCTAT+TGG - Chr5:93410981-93411000 MsG0580029189.01.T01:intron 30.0%
! TCTTTTGTTCTGCATCATTT+TGG - Chr5:93410801-93410820 MsG0580029189.01.T01:intron 30.0%
! TGTTTCTATTGGAGAATTAG+AGG - Chr5:93410992-93411011 MsG0580029189.01.T01:intron 30.0%
! TGTTTTTCTTTCATGGCTTT+GGG - Chr5:93410865-93410884 MsG0580029189.01.T01:intron 30.0%
!! CAAAAGTGTCAAAAAGCAAA+AGG + Chr5:93407245-93407264 None:intergenic 30.0%
!! GAAATAAAAGTGCTTAAGCA+TGG - Chr5:93409536-93409555 MsG0580029189.01.T01:intron 30.0%
!! GATGTCCTTTTGTTATATTC+AGG - Chr5:93406955-93406974 MsG0580029189.01.T01:intron 30.0%
!! GTCATTTTATGTTATGGAGA+TGG + Chr5:93407845-93407864 None:intergenic 30.0%
!! TTGTGAAGATGTTGTTTCAA+AGG - Chr5:93408683-93408702 MsG0580029189.01.T01:intron 30.0%
!! TTGTTTGTTGTTCATCTTGA+AGG - Chr5:93408618-93408637 MsG0580029189.01.T01:intron 30.0%
!! TTTGTTTTCTCAGAGAAGAA+AGG - Chr5:93410152-93410171 MsG0580029189.01.T01:intron 30.0%
!!! CTTTTGCTTTTTGACACTTT+TGG - Chr5:93407243-93407262 MsG0580029189.01.T01:intron 30.0%
!!! GTTTTTTAGGCCTGATTAAA+TGG - Chr5:93410464-93410483 MsG0580029189.01.T01:intron 30.0%
!!! TGTTTAACGGGTTTTTTAGT+TGG - Chr5:93410555-93410574 MsG0580029189.01.T01:intron 30.0%
AAATGTTATGGTGTACGGAT+GGG - Chr5:93407061-93407080 MsG0580029189.01.T01:intron 35.0%
AAGGAAAATCTGTTCTCGAA+CGG - Chr5:93411205-93411224 MsG0580029189.01.T01:CDS 35.0%
ACGCAGCTTAAATTGTGTTA+AGG - Chr5:93409337-93409356 MsG0580029189.01.T01:intron 35.0%
ACTTAATGCAGCATAGAAAC+AGG + Chr5:93411131-93411150 None:intergenic 35.0%
AGAAGTTACTTCTGTGCAAA+AGG - Chr5:93410005-93410024 MsG0580029189.01.T01:intron 35.0%
AGATAAACAATCGGAGTGAT+CGG - Chr5:93409415-93409434 MsG0580029189.01.T01:intron 35.0%
AGCGATATATAAGTATGTCG+TGG - Chr5:93411438-93411457 MsG0580029189.01.T01:intron 35.0%
AGGACAGAAATATGATGACT+GGG - Chr5:93411012-93411031 MsG0580029189.01.T01:intron 35.0%
AGGATAGTATTATACACCAC+TGG + Chr5:93406793-93406812 None:intergenic 35.0%
ATAACAATCATGGACCTAAG+AGG + Chr5:93407336-93407355 None:intergenic 35.0%
ATGTTATGGAGATGGATGTT+GGG + Chr5:93407837-93407856 None:intergenic 35.0%
ATTCTCTCTCGTGTCAATTT+AGG + Chr5:93410250-93410269 None:intergenic 35.0%
CAACTATTCTCAGGATGTAT+CGG + Chr5:93409605-93409624 None:intergenic 35.0%
CAAGGATAACTTACACCTTA+CGG + Chr5:93410697-93410716 None:intergenic 35.0%
CAATAACATAAGGTTGAAGG+TGG + Chr5:93409741-93409760 None:intergenic 35.0%
CATCAATGTTGTAAATCTGG+AGG + Chr5:93407920-93407939 None:intergenic 35.0%
GCAAATAGTCCTTCAAAAGT+AGG + Chr5:93410046-93410065 None:intergenic 35.0%
GGAGCATGAAGTTTATTGTA+AGG - Chr5:93406894-93406913 MsG0580029189.01.T01:intron 35.0%
GGATAACAGCTTTGCTTATT+TGG - Chr5:93409195-93409214 MsG0580029189.01.T01:intron 35.0%
GTCATCAACCATTTGTGTAT+TGG - Chr5:93409670-93409689 MsG0580029189.01.T01:intron 35.0%
GTCCACCTGAATATAACAAA+AGG + Chr5:93406963-93406982 None:intergenic 35.0%
GTCGGAAATTAAAGTTATGG+TGG - Chr5:93409370-93409389 MsG0580029189.01.T01:intron 35.0%
GTGTAAGTTATCCTTGACAT+TGG - Chr5:93410701-93410720 MsG0580029189.01.T01:intron 35.0%
GTTGAATGTTACCTTTGGTT+TGG + Chr5:93408434-93408453 None:intergenic 35.0%
GTTTATTGTAAGGAGCTTCT+TGG - Chr5:93406904-93406923 MsG0580029189.01.T01:intron 35.0%
TAGACATGATTCTTTAGCGA+CGG + Chr5:93407700-93407719 None:intergenic 35.0%
TATGAGTGTATCTGACAAAG+TGG - Chr5:93409934-93409953 MsG0580029189.01.T01:intron 35.0%
TATGTTATGGAGATGGATGT+TGG + Chr5:93407838-93407857 None:intergenic 35.0%
TGAAGGTGGTCATTAAATCA+AGG + Chr5:93409727-93409746 None:intergenic 35.0%
TGGAACCGACATTTCTTTAT+TGG - Chr5:93410575-93410594 MsG0580029189.01.T01:intron 35.0%
TGTTAAGGTACACAAATGGT+CGG - Chr5:93409352-93409371 MsG0580029189.01.T01:intron 35.0%
TTACTTCTGTGCAAAAGGAA+AGG - Chr5:93410010-93410029 MsG0580029189.01.T01:intron 35.0%
TTGTTGAAGTTTCGACGATT+AGG - Chr5:93409031-93409050 MsG0580029189.01.T01:intron 35.0%
TTTAATCGTCATGCTTCAAC+TGG + Chr5:93409485-93409504 None:intergenic 35.0%
! AAAAGCCAGAAGTACAAAGA+AGG - Chr5:93411186-93411205 MsG0580029189.01.T01:intron 35.0%
! AAAGTTATGGTGGAACTAGA+AGG - Chr5:93409380-93409399 MsG0580029189.01.T01:intron 35.0%
! ACTTGACTGTATTACTGGTT+GGG - Chr5:93409452-93409471 MsG0580029189.01.T01:intron 35.0%
! AGAAGAGTACGTAAGAAATG+TGG + Chr5:93408403-93408422 None:intergenic 35.0%
! CACGCTTGATAATCGATTTA+AGG - Chr5:93409301-93409320 MsG0580029189.01.T01:intron 35.0%
! TCGATTTAAGGTTGCGTTTA+TGG - Chr5:93409313-93409332 MsG0580029189.01.T01:intron 35.0%
! TTGTTGTTCATCTTGAAGGA+AGG - Chr5:93408622-93408641 MsG0580029189.01.T01:intron 35.0%
!! GGAAGTAATCCTACTTTTGA+AGG - Chr5:93410034-93410053 MsG0580029189.01.T01:intron 35.0%
!! GTCCTTTTGTTATATTCAGG+TGG - Chr5:93406958-93406977 MsG0580029189.01.T01:intron 35.0%
!! GTTTTGGCATTAGCACAATT+TGG + Chr5:93409777-93409796 None:intergenic 35.0%
!! TTACTTGTGCTGTTTCATTC+AGG - Chr5:93410637-93410656 MsG0580029189.01.T01:intron 35.0%
!!! GTAATTTGTTTTGCTGTGGT+GGG - Chr5:93409136-93409155 MsG0580029189.01.T01:intron 35.0%
!!! TGTAATTTGTTTTGCTGTGG+TGG - Chr5:93409135-93409154 MsG0580029189.01.T01:intron 35.0%
!!! TGTTACCTTTGGTTTGGTTT+TGG + Chr5:93408428-93408447 None:intergenic 35.0%
AATCAGATTCGCAGTGACTT+CGG + Chr5:93409098-93409117 None:intergenic 40.0%
ACATCTTCACAAAGAGCAAG+AGG + Chr5:93408675-93408694 None:intergenic 40.0%
ACTTAGGCCTGCAAATGTTA+TGG - Chr5:93407049-93407068 MsG0580029189.01.T01:intron 40.0%
AGTCTCCTGAAAGAAACCAA+AGG + Chr5:93411157-93411176 None:intergenic 40.0%
AGTGCTTAAGCATGGTATTG+TGG - Chr5:93409544-93409563 MsG0580029189.01.T01:intron 40.0%
ATAATGCGGCTTAGAGCTAA+TGG + Chr5:93410902-93410921 None:intergenic 40.0%
ATCTTCACAAAGAGCAAGAG+GGG + Chr5:93408673-93408692 None:intergenic 40.0%
CAAATGTTATGGTGTACGGA+TGG - Chr5:93407060-93407079 MsG0580029189.01.T01:intron 40.0%
CACTTGACTGTATTACTGGT+TGG - Chr5:93409451-93409470 MsG0580029189.01.T01:intron 40.0%
CATCTTCACAAAGAGCAAGA+GGG + Chr5:93408674-93408693 None:intergenic 40.0%
CCAAAACATGTATGCTTCCT+TGG - Chr5:93409790-93409809 MsG0580029189.01.T01:intron 40.0%
CCTGCAAATGTTATGGTGTA+CGG - Chr5:93407056-93407075 MsG0580029189.01.T01:intron 40.0%
GAGGACAGAAATATGATGAC+TGG - Chr5:93411011-93411030 MsG0580029189.01.T01:intron 40.0%
GATCATGTTCAGTTATTGCG+TGG - Chr5:93408568-93408587 MsG0580029189.01.T01:intron 40.0%
GCTTAGAGCTAATGGAGATT+CGG + Chr5:93410894-93410913 None:intergenic 40.0%
GGGTTGAGCCGTTATATTAT+TGG - Chr5:93410338-93410357 MsG0580029189.01.T01:intron 40.0%
GTCTCCTGAAAGAAACCAAA+GGG + Chr5:93411156-93411175 None:intergenic 40.0%
GTGTTCTGTCCTGATAACTT+TGG - Chr5:93410737-93410756 MsG0580029189.01.T01:intron 40.0%
TAAGCATGGTATTGTGGCAA+TGG - Chr5:93409550-93409569 MsG0580029189.01.T01:intron 40.0%
TAATTACTCTGTCAGTGTCG+TGG - Chr5:93411373-93411392 MsG0580029189.01.T01:intron 40.0%
TAATTCCTTATCCAGTGCTC+CGG + Chr5:93408030-93408049 None:intergenic 40.0%
TAGTTTCTTAACTAGTGCCC+CGG - Chr5:93408146-93408165 MsG0580029189.01.T01:intron 40.0%
TATATCGCTCAAAACCCATG+TGG + Chr5:93411427-93411446 None:intergenic 40.0%
TCCTGATGGCAGCAATTATT+GGG - Chr5:93411503-93411522 MsG0580029189.01.T01:CDS 40.0%
TCTCTCCAAAACCAAACCAA+AGG - Chr5:93408420-93408439 MsG0580029189.01.T01:intron 40.0%
TCTCTCGTGTCAATTTAGGT+GGG + Chr5:93410246-93410265 None:intergenic 40.0%
TGCCAAACATCAACACATGT+CGG - Chr5:93411399-93411418 MsG0580029189.01.T01:intron 40.0%
TGCTGCATTAAGTTACCCTT+TGG - Chr5:93411138-93411157 MsG0580029189.01.T01:intron 40.0%
TGTTATATTCAGGTGGACGA+AGG - Chr5:93406965-93406984 MsG0580029189.01.T01:intron 40.0%
TTTCAACACCATGTGTTGCA+TGG + Chr5:93411533-93411552 None:intergenic 40.0%
! ACTACAACGCTAGACCTTTT+TGG + Chr5:93407383-93407402 None:intergenic 40.0%
! ATGCAACACATGGTGTTGAA+AGG - Chr5:93411532-93411551 MsG0580029189.01.T01:CDS 40.0%
! GAGTTTTTGCTCTTTTGACC+AGG - Chr5:93411466-93411485 MsG0580029189.01.T01:intron 40.0%
! GTTACCCTTTGGTTTCTTTC+AGG - Chr5:93411149-93411168 MsG0580029189.01.T01:intron 40.0%
! TGCAACACATGGTGTTGAAA+GGG - Chr5:93411533-93411552 MsG0580029189.01.T01:CDS 40.0%
! TGTATTACTGGTTGGGTTGT+TGG - Chr5:93409459-93409478 MsG0580029189.01.T01:intron 40.0%
! TTTTGTCACTCGTGGGATTA+GGG - Chr5:93407120-93407139 MsG0580029189.01.T01:intron 40.0%
!! AGTGAAAGGTACCAATGTCA+AGG + Chr5:93410715-93410734 None:intergenic 40.0%
!! CCAAGGAAGCATACATGTTT+TGG + Chr5:93409793-93409812 None:intergenic 40.0%
!! GAAGGTATCAATGAAGAAGG+AGG - Chr5:93406983-93407002 MsG0580029189.01.T01:intron 40.0%
!! GACGAAGGTATCAATGAAGA+AGG - Chr5:93406980-93406999 MsG0580029189.01.T01:intron 40.0%
!!! ATTAGGGTTCTGGGCTTTTA+TGG - Chr5:93407136-93407155 MsG0580029189.01.T01:CDS 40.0%
!!! ATTGGTTTTGCCGTCCAAAA+AGG - Chr5:93407366-93407385 MsG0580029189.01.T01:intron 40.0%
AATTCCTTATCCAGTGCTCC+GGG + Chr5:93408029-93408048 None:intergenic 45.0%
ACCCAATAATTGCTGCCATC+AGG + Chr5:93411507-93411526 None:intergenic 45.0%
AGGACAGAACACGTAGTGAA+AGG + Chr5:93410729-93410748 None:intergenic 45.0%
AGGAGGTAAACATGCAAGTG+TGG - Chr5:93407085-93407104 MsG0580029189.01.T01:intron 45.0%
ATATAACGGCTCAACCCACT+TGG + Chr5:93410335-93410354 None:intergenic 45.0%
CATCCTGAGAATAGTTGACG+CGG - Chr5:93409608-93409627 MsG0580029189.01.T01:intron 45.0%
CCGTACACCATAACATTTGC+AGG + Chr5:93407059-93407078 None:intergenic 45.0%
CGATGACGCACTATGATTCA+TGG - Chr5:93408876-93408895 MsG0580029189.01.T01:intron 45.0%
CTCTCTCGTGTCAATTTAGG+TGG + Chr5:93410247-93410266 None:intergenic 45.0%
CTTCTGTGCAAAAGGAAAGG+TGG - Chr5:93410013-93410032 MsG0580029189.01.T01:intron 45.0%
GAAATGTTAACCAGTGCTCC+CGG - Chr5:93408008-93408027 MsG0580029189.01.T01:intron 45.0%
GAAGGCTTATCTCTTCCGTA+AGG - Chr5:93410679-93410698 MsG0580029189.01.T01:intron 45.0%
GTCCTGATGGCAGCAATTAT+TGG - Chr5:93411502-93411521 MsG0580029189.01.T01:CDS 45.0%
GTCTTACATATGTCCAACCG+AGG + Chr5:93411082-93411101 None:intergenic 45.0%
TAGAACACGACAAGATGCGT+GGG + Chr5:93408343-93408362 None:intergenic 45.0%
TAGAGCTAATGGAGATTCGG+AGG + Chr5:93410891-93410910 None:intergenic 45.0%
TATAACGGCTCAACCCACTT+GGG + Chr5:93410334-93410353 None:intergenic 45.0%
TCTTGTTAACCAGTGTCTCC+GGG + Chr5:93408167-93408186 None:intergenic 45.0%
! CAACGCTAGACCTTTTTGGA+CGG + Chr5:93407379-93407398 None:intergenic 45.0%
! CACCGACATGTGTTGATGTT+TGG + Chr5:93411404-93411423 None:intergenic 45.0%
! GTCTTGTTAACCAGTGTCTC+CGG + Chr5:93408168-93408187 None:intergenic 45.0%
! GTGGCTGACATTTTCTGTGT+CGG - Chr5:93411044-93411063 MsG0580029189.01.T01:intron 45.0%
! GTTTTGTCACTCGTGGGATT+AGG - Chr5:93407119-93407138 MsG0580029189.01.T01:intron 45.0%
! TGCTCTTTTGACCAGGTTCA+AGG - Chr5:93411473-93411492 MsG0580029189.01.T01:intron 45.0%
!!! GACATTTTCTGTGTCGGTTG+TGG - Chr5:93411050-93411069 MsG0580029189.01.T01:intron 45.0%
!!! GGTTCTGGGCTTTTATGGTA+GGG - Chr5:93407141-93407160 MsG0580029189.01.T01:CDS 45.0%
!! CAAAAAAAAAAAAAATATAA+CGG + Chr5:93410208-93410227 None:intergenic 5.0%
AAACTGCCGAAACAGCACCA+TGG - Chr5:93409642-93409661 MsG0580029189.01.T01:intron 50.0%
AAGGCGTGCCTAGATACTCT+TGG - Chr5:93406871-93406890 MsG0580029189.01.T01:intron 50.0%
AATCATGGACCTAAGAGGCG+TGG + Chr5:93407331-93407350 None:intergenic 50.0%
ACAACAATGCCACGCCTCTT+AGG - Chr5:93407319-93407338 MsG0580029189.01.T01:CDS 50.0%
ACAGGACACGCCTCATCAAT+AGG + Chr5:93406844-93406863 None:intergenic 50.0%
ACTCGTGGGATTAGGGTTCT+GGG - Chr5:93407127-93407146 MsG0580029189.01.T01:intron 50.0%
AGGCGTGCCTAGATACTCTT+GGG - Chr5:93406872-93406891 MsG0580029189.01.T01:intron 50.0%
AGGCTTTCCACAGCAGACAT+GGG - Chr5:93410657-93410676 MsG0580029189.01.T01:intron 50.0%
ATGCAAGTGTGGACTTGACC+GGG - Chr5:93407096-93407115 MsG0580029189.01.T01:intron 50.0%
CATGCAAGTGTGGACTTGAC+CGG - Chr5:93407095-93407114 MsG0580029189.01.T01:intron 50.0%
CGATGACGCGCTATGATTCA+TGG - Chr5:93408975-93408994 MsG0580029189.01.T01:intron 50.0%
CTACCGCGTCAACTATTCTC+AGG + Chr5:93409614-93409633 None:intergenic 50.0%
CTTGTTAACCAGTGTCTCCG+GGG + Chr5:93408166-93408185 None:intergenic 50.0%
GAATCGAACCTGAGACCTCA+AGG - Chr5:93410266-93410285 MsG0580029189.01.T01:intron 50.0%
GAGAATAGTTGACGCGGTAG+TGG - Chr5:93409614-93409633 MsG0580029189.01.T01:intron 50.0%
GATGACTGGGATGCATACTG+TGG - Chr5:93411025-93411044 MsG0580029189.01.T01:intron 50.0%
GGATGTTGGGTGTTTGTTCG+TGG + Chr5:93407824-93407843 None:intergenic 50.0%
GTAGAACACGACAAGATGCG+TGG + Chr5:93408344-93408363 None:intergenic 50.0%
GTCGGTTGTGGATCAATCCT+CGG - Chr5:93411062-93411081 MsG0580029189.01.T01:intron 50.0%
GTTATGGTGTACGGATGGGT+AGG - Chr5:93407065-93407084 MsG0580029189.01.T01:intron 50.0%
GTTGTGGATCAATCCTCGGT+TGG - Chr5:93411066-93411085 MsG0580029189.01.T01:intron 50.0%
TTGATGAGGCGTGTCCTGTT+TGG - Chr5:93406845-93406864 MsG0580029189.01.T01:CDS 50.0%
TTTCCACAGCAGACATGGGA+AGG - Chr5:93410661-93410680 MsG0580029189.01.T01:intron 50.0%
! GGGGCACTTGACTGTATTAC+TGG - Chr5:93409447-93409466 MsG0580029189.01.T01:intron 50.0%
! TTCAAGGTGTCTGGTCCTGA+TGG - Chr5:93411489-93411508 MsG0580029189.01.T01:CDS 50.0%
! TTGACCAGGTTCAAGGTGTC+TGG - Chr5:93411480-93411499 MsG0580029189.01.T01:intron 50.0%
!! AACACATGTCGGTGCCACAT+GGG - Chr5:93411410-93411429 MsG0580029189.01.T01:intron 50.0%
!! AGCGACGGTTAAGTTGATCG+TGG + Chr5:93407685-93407704 None:intergenic 50.0%
!! CATGCTCCCCAAGAGTATCT+AGG + Chr5:93406882-93406901 None:intergenic 50.0%
!! GCGACGGTTAAGTTGATCGT+GGG + Chr5:93407684-93407703 None:intergenic 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG + Chr5:93410310-93410329 None:intergenic 50.0%
!! TGGGTTAGCCATGCAACACA+TGG - Chr5:93411522-93411541 MsG0580029189.01.T01:CDS 50.0%
!! TGGTGCTGTTTCGGCAGTTT+CGG + Chr5:93409642-93409661 None:intergenic 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG + Chr5:93410311-93410330 None:intergenic 50.0%
!! TTGGGTTGGCCTAGTGGTAT+TGG + Chr5:93410316-93410335 None:intergenic 50.0%
!!! GGGTTCTGGGCTTTTATGGT+AGG - Chr5:93407140-93407159 MsG0580029189.01.T01:CDS 50.0%
!!! TTTTGGCTTCCTTGCGCTAG+AGG - Chr5:93407260-93407279 MsG0580029189.01.T01:intron 50.0%
AAGCCTTCCCATGTCTGCTG+TGG + Chr5:93410667-93410686 None:intergenic 55.0%
AATCGGAGTGATCGGCCTTG+AGG - Chr5:93409423-93409442 MsG0580029189.01.T01:intron 55.0%
ACCACTAGGCCAACCCAAGT+GGG - Chr5:93410318-93410337 MsG0580029189.01.T01:intron 55.0%
AGGACCAGACACCTTGAACC+TGG + Chr5:93411487-93411506 None:intergenic 55.0%
ATGGTGTACGGATGGGTAGG+AGG - Chr5:93407068-93407087 MsG0580029189.01.T01:intron 55.0%
CACTCGTGGGATTAGGGTTC+TGG - Chr5:93407126-93407145 MsG0580029189.01.T01:intron 55.0%
CAGGCTTTCCACAGCAGACA+TGG - Chr5:93410656-93410675 MsG0580029189.01.T01:intron 55.0%
GGCGTGCCTAGATACTCTTG+GGG - Chr5:93406873-93406892 MsG0580029189.01.T01:intron 55.0%
GGTCAACAACCTCTAGCGCA+AGG + Chr5:93407272-93407291 None:intergenic 55.0%
GGTCCCAAGCCAATACCACT+AGG - Chr5:93410304-93410323 MsG0580029189.01.T01:intron 55.0%
TACCACTAGGCCAACCCAAG+TGG - Chr5:93410317-93410336 MsG0580029189.01.T01:intron 55.0%
TCCCACGAGTGACAAAACCC+CGG + Chr5:93407117-93407136 None:intergenic 55.0%
TCGAACCTGAGACCTCAAGG+AGG - Chr5:93410269-93410288 MsG0580029189.01.T01:intron 55.0%
TGCAAGTGTGGACTTGACCG+GGG - Chr5:93407097-93407116 MsG0580029189.01.T01:intron 55.0%
! CTGGGCTTTTATGGTAGGGC+AGG - Chr5:93407145-93407164 MsG0580029189.01.T01:CDS 55.0%
!! ACCGGGGTTTTGTCACTCGT+GGG - Chr5:93407113-93407132 MsG0580029189.01.T01:intron 55.0%
!! AGTGGTATTGGCTTGGGACC+TGG + Chr5:93410304-93410323 None:intergenic 55.0%
!! ATGGTTGATGACCGCTGCCA+TGG + Chr5:93409662-93409681 None:intergenic 55.0%
!! CAACACATGTCGGTGCCACA+TGG - Chr5:93411409-93411428 MsG0580029189.01.T01:intron 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG + Chr5:93410303-93410322 None:intergenic 55.0%
AACTAGTGCCCCGGAGACAC+TGG - Chr5:93408155-93408174 MsG0580029189.01.T01:intron 60.0%
ACGGCTCAACCCACTTGGGT+TGG + Chr5:93410330-93410349 None:intergenic 60.0%
AGGCACGCCTTACGCCAAAC+AGG + Chr5:93406862-93406881 None:intergenic 60.0%
CCGAAACAGCACCATGGCAG+CGG - Chr5:93409648-93409667 MsG0580029189.01.T01:intron 60.0%
GGCGTGTCCTGTTTGGCGTA+AGG - Chr5:93406852-93406871 MsG0580029189.01.T01:intron 60.0%
GTGCTCCTCCTTGAGGTCTC+AGG + Chr5:93410277-93410296 None:intergenic 60.0%
! TCAAGGAGGAGCACACTCCC+AGG - Chr5:93410283-93410302 MsG0580029189.01.T01:intron 60.0%
! TGGGAGTGTGCTCCTCCTTG+AGG + Chr5:93410284-93410303 None:intergenic 60.0%
!! ACCCACTTGGGTTGGCCTAG+TGG + Chr5:93410322-93410341 None:intergenic 60.0%
!! CCGCTGCCATGGTGCTGTTT+CGG + Chr5:93409651-93409670 None:intergenic 60.0%
!! GACCGGGGTTTTGTCACTCG+TGG - Chr5:93407112-93407131 MsG0580029189.01.T01:intron 60.0%
!! TGCTCCCGGAGCACTGGATA+AGG - Chr5:93408022-93408041 MsG0580029189.01.T01:intron 60.0%
AACCAGTGCTCCCGGAGCAC+TGG - Chr5:93408016-93408035 MsG0580029189.01.T01:intron 65.0%
CAGTCAAGTGCCCCGCCTCA+AGG + Chr5:93409441-93409460 None:intergenic 65.0%
CGGAGTGATCGGCCTTGAGG+CGG - Chr5:93409426-93409445 MsG0580029189.01.T01:intron 65.0%
GAGTGATCGGCCTTGAGGCG+GGG - Chr5:93409428-93409447 MsG0580029189.01.T01:intron 65.0%
GGAGTGATCGGCCTTGAGGC+GGG - Chr5:93409427-93409446 MsG0580029189.01.T01:intron 65.0%
! ATCCAGTGCTCCGGGAGCAC+TGG + Chr5:93408021-93408040 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 93406784 93411572 93406784 ID=MsG0580029189.01;Name=MsG0580029189.01
Chr5 mRNA 93406784 93411572 93406784 ID=MsG0580029189.01.T01;Parent=MsG0580029189.01;Name=MsG0580029189.01.T01;_AED=0.66;_eAED=0.66;_QI=0|0|0|0.83|1|1|6|0|191
Chr5 exon 93411481 93411572 93411481 ID=MsG0580029189.01.T01:exon:49677;Parent=MsG0580029189.01.T01
Chr5 exon 93411190 93411379 93411190 ID=MsG0580029189.01.T01:exon:49676;Parent=MsG0580029189.01.T01
Chr5 exon 93407654 93407697 93407654 ID=MsG0580029189.01.T01:exon:49675;Parent=MsG0580029189.01.T01
Chr5 exon 93407262 93407370 93407262 ID=MsG0580029189.01.T01:exon:49674;Parent=MsG0580029189.01.T01
Chr5 exon 93407130 93407185 93407130 ID=MsG0580029189.01.T01:exon:49673;Parent=MsG0580029189.01.T01
Chr5 exon 93406784 93406868 93406784 ID=MsG0580029189.01.T01:exon:49672;Parent=MsG0580029189.01.T01
Chr5 CDS 93411481 93411572 93411481 ID=MsG0580029189.01.T01:cds;Parent=MsG0580029189.01.T01
Chr5 CDS 93411190 93411379 93411190 ID=MsG0580029189.01.T01:cds;Parent=MsG0580029189.01.T01
Chr5 CDS 93407654 93407697 93407654 ID=MsG0580029189.01.T01:cds;Parent=MsG0580029189.01.T01
Chr5 CDS 93407262 93407370 93407262 ID=MsG0580029189.01.T01:cds;Parent=MsG0580029189.01.T01
Chr5 CDS 93407130 93407185 93407130 ID=MsG0580029189.01.T01:cds;Parent=MsG0580029189.01.T01
Chr5 CDS 93406784 93406868 93406784 ID=MsG0580029189.01.T01:cds;Parent=MsG0580029189.01.T01
Gene Sequence

>MsG0580029189.01.T01

ATGTCGCCAGTGGTGTATAATACTATCCTTAGATATCGTGTTATGATTTCACTATTTCCTATTGATGAGGCGTGTCCTGTTTGGCGTAAGGCGTGGACGAAGGTATCAATGAAGAAGGAGGCGCATGTGAACTTCTTGACAGACCTACTAGATAAAAGATCTACACTTAGGCCTGCAAATGTTATGGTGTACGGATGGGTAGGAGGTAAACATGCAAGTGTGGACTTGACCGGGGTTTTGTCACTCGTGGGATTAGGGTTCTGGGCTTTTATGGTAGGGCAGGCTTTCCACAGCAGACATGGGAAGGCTTATCTCTTCCGTAAGGTTGTGAATGTTTCTATTGGAGAATTAGAGGACAGAAATATGATGACTGGGATGCATACTGTGGCTGACATTTTCTGTGTCGGTTGTGGATCAATCCTCGGTTGGACATATGAGACTGCTCATGAAAAAAGCCAGAAGTACAAAGAAGGAAAATCTGTTCTCGAACGGTTCAAGGTGTCTGGTCCTGATGGCAGCAATTATTGGGTTAGCCATGCAACACATGGTGTTGAAAGGGATGCAGATGATGCTTAA

Protein sequence

>MsG0580029189.01.T01

MSPVVYNTILRYRVMISLFPIDEACPVWRKAWTKVSMKKEAHVNFLTDLLDKRSTLRPANVMVYGWVGGKHASVDLTGVLSLVGLGFWAFMVGQAFHSRHGKAYLFRKVVNVSIGELEDRNMMTGMHTVADIFCVGCGSILGWTYETAHEKSQKYKEGKSVLERFKVSGPDGSNYWVSHATHGVERDADDA*