Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016593.01.T01 | XP_003602338.1 | 84.05 | 558 | 25 | 7 | 1 | 512 | 1 | 540 | 0 | 905 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016593.01.T01 | Q9FJB8 | 36.982 | 338 | 135 | 10 | 126 | 443 | 57 | 336 | 7.02E-42 | 156 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016593.01.T01 | G7J891 | 84.050 | 558 | 25 | 7 | 1 | 512 | 1 | 540 | 0.0 | 905 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0380016593.01 | MsG0380016639.01 | 0.825349 | 4.919784e-54 | 4.472898e-51 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016593.01.T01 | MTR_3g092330 | 84.050 | 558 | 25 | 7 | 1 | 512 | 1 | 540 | 0.0 | 905 |
MsG0380016593.01.T01 | MTR_1g017490 | 50.704 | 142 | 42 | 4 | 103 | 218 | 117 | 256 | 9.76e-34 | 135 |
MsG0380016593.01.T01 | MTR_1g017490 | 54.331 | 127 | 28 | 4 | 116 | 218 | 3 | 123 | 3.92e-33 | 132 |
MsG0380016593.01.T01 | MTR_0001s0490 | 53.153 | 111 | 35 | 2 | 128 | 221 | 25 | 135 | 1.66e-32 | 127 |
MsG0380016593.01.T01 | MTR_5g027030 | 57.000 | 100 | 35 | 2 | 126 | 218 | 14 | 112 | 4.39e-30 | 120 |
MsG0380016593.01.T01 | MTR_8g020560 | 49.541 | 109 | 37 | 2 | 129 | 219 | 12 | 120 | 1.26e-29 | 119 |
MsG0380016593.01.T01 | MTR_2g041430 | 50.000 | 114 | 35 | 3 | 128 | 219 | 7 | 120 | 3.32e-29 | 118 |
MsG0380016593.01.T01 | MTR_2g041430 | 50.000 | 114 | 35 | 3 | 128 | 219 | 7 | 120 | 3.60e-29 | 118 |
MsG0380016593.01.T01 | MTR_2g041430 | 50.000 | 114 | 35 | 3 | 128 | 219 | 7 | 120 | 3.89e-29 | 118 |
MsG0380016593.01.T01 | MTR_7g104050 | 44.604 | 139 | 50 | 3 | 109 | 225 | 60 | 193 | 7.90e-29 | 117 |
MsG0380016593.01.T01 | MTR_4g125490 | 49.153 | 118 | 42 | 3 | 128 | 227 | 9 | 126 | 8.70e-29 | 119 |
MsG0380016593.01.T01 | MTR_7g104050 | 44.604 | 139 | 50 | 3 | 109 | 225 | 60 | 193 | 1.17e-28 | 117 |
MsG0380016593.01.T01 | MTR_8g035910 | 46.218 | 119 | 51 | 3 | 127 | 233 | 48 | 165 | 2.56e-23 | 102 |
MsG0380016593.01.T01 | MTR_8g035910 | 56.667 | 60 | 25 | 1 | 154 | 212 | 276 | 335 | 6.95e-14 | 73.9 |
MsG0380016593.01.T01 | MTR_8g035640 | 52.542 | 59 | 27 | 1 | 155 | 212 | 31 | 89 | 1.77e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380016593.01.T01 | AT5G53660 | 36.982 | 338 | 135 | 10 | 126 | 443 | 57 | 336 | 7.16e-43 | 156 |
MsG0380016593.01.T01 | AT2G22840 | 54.310 | 116 | 35 | 2 | 128 | 226 | 133 | 247 | 2.24e-31 | 127 |
MsG0380016593.01.T01 | AT4G37740 | 32.706 | 425 | 173 | 18 | 128 | 498 | 164 | 529 | 3.09e-31 | 127 |
MsG0380016593.01.T01 | AT4G24150 | 31.944 | 360 | 170 | 16 | 102 | 427 | 90 | 408 | 2.41e-30 | 123 |
MsG0380016593.01.T01 | AT3G13960 | 51.327 | 113 | 37 | 2 | 124 | 218 | 12 | 124 | 3.89e-30 | 122 |
MsG0380016593.01.T01 | AT4G24150 | 31.944 | 360 | 170 | 16 | 102 | 427 | 128 | 446 | 4.26e-30 | 123 |
MsG0380016593.01.T01 | AT2G36400 | 52.137 | 117 | 35 | 1 | 129 | 224 | 77 | 193 | 1.73e-28 | 117 |
MsG0380016593.01.T01 | AT4G24150 | 29.870 | 385 | 170 | 16 | 102 | 427 | 128 | 471 | 1.48e-26 | 113 |
MsG0380016593.01.T01 | AT3G52910 | 49.107 | 112 | 35 | 2 | 129 | 218 | 83 | 194 | 2.48e-26 | 110 |
MsG0380016593.01.T01 | AT2G06200 | 42.759 | 145 | 48 | 5 | 102 | 216 | 23 | 162 | 1.33e-25 | 106 |
MsG0380016593.01.T01 | AT2G06200 | 46.610 | 118 | 34 | 3 | 128 | 216 | 6 | 123 | 2.35e-25 | 105 |
MsG0380016593.01.T01 | AT2G45480 | 44.444 | 108 | 42 | 2 | 126 | 215 | 22 | 129 | 9.53e-19 | 87.4 |
MsG0380016593.01.T01 | AT2G45480 | 44.444 | 108 | 42 | 2 | 126 | 215 | 20 | 127 | 5.53e-18 | 86.7 |
MsG0380016593.01.T01 | AT2G45480 | 50.000 | 74 | 32 | 3 | 154 | 227 | 287 | 355 | 2.46e-13 | 72.4 |
MsG0380016593.01.T01 | AT2G45480 | 44.444 | 108 | 42 | 2 | 126 | 215 | 22 | 129 | 5.75e-18 | 86.7 |
MsG0380016593.01.T01 | AT2G45480 | 50.000 | 74 | 32 | 3 | 154 | 227 | 289 | 357 | 2.55e-13 | 72.4 |
MsG0380016593.01.T01 | AT2G06200 | 72.727 | 44 | 10 | 1 | 175 | 216 | 8 | 51 | 5.51e-15 | 73.6 |
Find 136 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAACACAAACTAACCTTTA+AGG | 0.146408 | 3:-85488771 | None:intergenic |
GTGAAAAGGTTGAAAATTTA+AGG | 0.152843 | 3:-85488725 | None:intergenic |
GCTTCCAACACAACCCTTAA+AGG | 0.155280 | 3:+85488757 | MsG0380016593.01.T01:CDS |
CTTACCTCAAAAGTTAATTT+TGG | 0.198885 | 3:+85488305 | MsG0380016593.01.T01:five_prime_UTR |
TCCCTTGGTGCTTCTAATTC+AGG | 0.206328 | 3:+85490158 | MsG0380016593.01.T01:CDS |
AAGATAGATAGTGGTGTTTA+TGG | 0.229218 | 3:-85488281 | None:intergenic |
CTTTCACAGTACTTGTTATT+AGG | 0.229946 | 3:-85489402 | None:intergenic |
GTCGAATCCATTGGCACTTC+AGG | 0.255897 | 3:+85490734 | MsG0380016593.01.T01:CDS |
ACAACATACAACATGTCTTT+TGG | 0.266442 | 3:+85488649 | MsG0380016593.01.T01:CDS |
TTAGAAGCACCAAGGGAAAT+TGG | 0.300986 | 3:-85490152 | None:intergenic |
AACCTCTTGGTTTCTCAGAT+TGG | 0.311180 | 3:-85490358 | None:intergenic |
TTATGGGTTGCCGCCATTCT+CGG | 0.321119 | 3:-85488095 | None:intergenic |
GCCCTTGATGATGCAACATT+TGG | 0.323926 | 3:-85490839 | None:intergenic |
TATGATTTACAAGTACTTGA+TGG | 0.325776 | 3:+85488989 | MsG0380016593.01.T01:CDS |
GAGATTTATGATTGTGTTAT+GGG | 0.337690 | 3:-85488111 | None:intergenic |
TCAATCTGAGGCTATCAAAT+AGG | 0.341073 | 3:+85489304 | MsG0380016593.01.T01:CDS |
ATAGTGGTGTTTATGGCATA+TGG | 0.353545 | 3:-85488274 | None:intergenic |
AAACACAAACTAACCTTTAA+GGG | 0.361293 | 3:-85488770 | None:intergenic |
ACTACTAGTGTTATTGTTGT+TGG | 0.363306 | 3:-85488479 | None:intergenic |
TTCCACAGGCTTTCTTGAAC+GGG | 0.370446 | 3:-85489445 | None:intergenic |
AGAGATTTATGATTGTGTTA+TGG | 0.379088 | 3:-85488112 | None:intergenic |
GTCCACTAGCTGAAGTTCTA+AGG | 0.379508 | 3:+85490639 | MsG0380016593.01.T01:CDS |
ATGATTAAACTTATTGAGTA+AGG | 0.386331 | 3:-85490876 | None:intergenic |
GCTAATGCTATCATTGATAA+TGG | 0.393717 | 3:+85488694 | MsG0380016593.01.T01:CDS |
ATGGCGGCTTCAATAGGAAT+AGG | 0.401179 | 3:+85488918 | MsG0380016593.01.T01:CDS |
TTCATCACTTGATCTATCAA+TGG | 0.407184 | 3:+85490487 | MsG0380016593.01.T01:CDS |
GGATTCAGTGTTATTATGAT+AGG | 0.411587 | 3:-85490231 | None:intergenic |
GCTGTTGATGCTGAAGGTTA+TGG | 0.416004 | 3:+85488622 | MsG0380016593.01.T01:CDS |
ATAGTCATCATCAAATCAAA+AGG | 0.419333 | 3:+85489496 | MsG0380016593.01.T01:CDS |
CTTCTGCACCTACCAGCCTC+TGG | 0.433695 | 3:-85489339 | None:intergenic |
GGTGGAATGGCGGCTTCAAT+AGG | 0.433909 | 3:+85488912 | MsG0380016593.01.T01:CDS |
ACCATTGTTGGAGGTGGTGG+TGG | 0.435162 | 3:-85490438 | None:intergenic |
CTCCTTTCACAATTGCTCAA+TGG | 0.446940 | 3:+85488946 | MsG0380016593.01.T01:CDS |
GGATTAAGTAAGAGAGGAAA+GGG | 0.448727 | 3:-85490311 | None:intergenic |
ATTGTTGGAGGTGGTGGTGG+TGG | 0.456677 | 3:-85490435 | None:intergenic |
CTGATGCATAACAACAAACT+TGG | 0.457493 | 3:+85490191 | MsG0380016593.01.T01:CDS |
GGCTCAATCCAGCACAACCT+TGG | 0.462541 | 3:+85490597 | MsG0380016593.01.T01:CDS |
AACTGATGCAGAACCATTGT+TGG | 0.462885 | 3:-85490450 | None:intergenic |
GAAAGAAGATGAGAAGGAAC+AGG | 0.467897 | 3:-85489020 | None:intergenic |
TCATCACTTGATCTATCAAT+GGG | 0.468999 | 3:+85490488 | MsG0380016593.01.T01:CDS |
GGAATAGCCACAGTAAAATC+AGG | 0.474040 | 3:-85489548 | None:intergenic |
TCCATTGGCACTTCAGGGAC+AGG | 0.476778 | 3:+85490740 | MsG0380016593.01.T01:CDS |
CTAAAATAGCATTCTCAAGT+TGG | 0.478113 | 3:+85490576 | MsG0380016593.01.T01:CDS |
AATAACACTAGTAGTGTTGT+TGG | 0.478175 | 3:+85488487 | MsG0380016593.01.T01:CDS |
CTAACCTTTAAGGGTTGTGT+TGG | 0.481457 | 3:-85488761 | None:intergenic |
GCTCAATCCAGCACAACCTT+GGG | 0.488726 | 3:+85490598 | MsG0380016593.01.T01:CDS |
AGTTCAGAACTGTTATATAG+TGG | 0.490372 | 3:-85490272 | None:intergenic |
TGATAGATCAAGTGATGAAA+GGG | 0.490826 | 3:-85490483 | None:intergenic |
TCAATGAAACTAAAACCTCT+TGG | 0.493104 | 3:-85490371 | None:intergenic |
TCTGCTGCTGTTGATGCTGA+AGG | 0.494288 | 3:+85488616 | MsG0380016593.01.T01:CDS |
GTCCAAATGTTGCATCATCA+AGG | 0.496502 | 3:+85490837 | MsG0380016593.01.T01:CDS |
AAATGAAAGCAAACACACTT+TGG | 0.498639 | 3:-85488408 | None:intergenic |
TTATTTGTGTGAAGTTCCAC+AGG | 0.498667 | 3:-85489459 | None:intergenic |
TTGAGGCATGTCAAGAAGAC+AGG | 0.500003 | 3:-85488146 | None:intergenic |
TCGAATCCATTGGCACTTCA+GGG | 0.500942 | 3:+85490735 | MsG0380016593.01.T01:CDS |
AGAACCATTGTTGGAGGTGG+TGG | 0.506509 | 3:-85490441 | None:intergenic |
AGCAAATCAAAGGCCGAGAA+TGG | 0.507449 | 3:+85488082 | MsG0380016593.01.T01:five_prime_UTR |
GTTCCACAGGCTTTCTTGAA+CGG | 0.508728 | 3:-85489446 | None:intergenic |
GGCTTGGAGTGGATGCTGAA+TGG | 0.510711 | 3:+85490125 | MsG0380016593.01.T01:CDS |
CTGATGGAAGTAACATTGCT+TGG | 0.510713 | 3:-85490662 | None:intergenic |
GAACCTACCCAAGGTTGTGC+TGG | 0.517275 | 3:-85490605 | None:intergenic |
GTGGAAATGAATTCAGATAC+CGG | 0.521350 | 3:-85490253 | None:intergenic |
CATGTCAAGAAGACAGGTGT+TGG | 0.521966 | 3:-85488140 | None:intergenic |
TGGCGGCTTCAATAGGAATA+GGG | 0.523564 | 3:+85488919 | MsG0380016593.01.T01:CDS |
TCCTGTCCCTGAAGTGCCAA+TGG | 0.523915 | 3:-85490741 | None:intergenic |
TCAGATTGGAGAGTTTGCAT+TGG | 0.524106 | 3:-85490344 | None:intergenic |
CAAGAAGACAGGTGTTGGAA+TGG | 0.524490 | 3:-85488135 | None:intergenic |
GAATTGAATGAAAAGGGGCT+TGG | 0.524945 | 3:+85490109 | MsG0380016593.01.T01:intron |
CACTAGTAGTGTTGTTGGGT+CGG | 0.525074 | 3:+85488492 | MsG0380016593.01.T01:CDS |
GAAGCAGAAATGTTGTGAAA+AGG | 0.532749 | 3:-85488739 | None:intergenic |
GGGATTAAGTAAGAGAGGAA+AGG | 0.533228 | 3:-85490312 | None:intergenic |
GGCCTTAGAACTTCAGCTAG+TGG | 0.534033 | 3:-85490641 | None:intergenic |
TTGATAGATCAAGTGATGAA+AGG | 0.535432 | 3:-85490484 | None:intergenic |
AGAATTTGTTGCATCACTGA+TGG | 0.536310 | 3:-85490678 | None:intergenic |
AATGGAGATCCAATTTCCCT+TGG | 0.538520 | 3:+85490143 | MsG0380016593.01.T01:CDS |
CTCCATTGAGCAATTGTGAA+AGG | 0.540021 | 3:-85488948 | None:intergenic |
GGAATGGTATCATCTCCATC+TGG | 0.544391 | 3:+85490761 | MsG0380016593.01.T01:CDS |
ATTATGATAGGAACTTCCAT+TGG | 0.546307 | 3:-85490219 | None:intergenic |
ACCACCACCACCTCCAACAA+TGG | 0.549376 | 3:+85490437 | MsG0380016593.01.T01:CDS |
GAGGTAAGGAAGATAGATAG+TGG | 0.553853 | 3:-85488290 | None:intergenic |
ATACATGAAAGAAGATGAGA+AGG | 0.554354 | 3:-85489026 | None:intergenic |
GGTGGTCACAGCAGGTGGAA+TGG | 0.556637 | 3:+85488899 | MsG0380016593.01.T01:intron |
AACAATGGTTCTGCATCAGT+TGG | 0.557664 | 3:+85490452 | MsG0380016593.01.T01:CDS |
TTATTATGCAAAACACCAGA+TGG | 0.559997 | 3:-85490776 | None:intergenic |
AAAGACATGTTGTATGTTGT+GGG | 0.561732 | 3:-85488646 | None:intergenic |
AAAAGACATGTTGTATGTTG+TGG | 0.562174 | 3:-85488647 | None:intergenic |
AACAATACTGATCCAGAGGC+TGG | 0.566845 | 3:+85489327 | MsG0380016593.01.T01:CDS |
TGAGTTTCGCGTTCAAGACA+AGG | 0.567509 | 3:+85488441 | MsG0380016593.01.T01:CDS |
ACAAATCGTGTCGAATCCAT+TGG | 0.573702 | 3:+85490725 | MsG0380016593.01.T01:CDS |
GTTTGTTGTTATGCATCAGA+GGG | 0.575473 | 3:-85490187 | None:intergenic |
ATAACACTAGTAGTGTTGTT+GGG | 0.575929 | 3:+85488488 | MsG0380016593.01.T01:CDS |
AACAAACTTGGAATGACCAA+TGG | 0.577256 | 3:+85490203 | MsG0380016593.01.T01:CDS |
ATTGAAACTTAAGAAGCAGA+AGG | 0.579812 | 3:-85490927 | None:intergenic |
TAGTCATCATCAAATCAAAA+GGG | 0.580379 | 3:+85489497 | MsG0380016593.01.T01:CDS |
CATGATTATCAAAGAATGAA+CGG | 0.581245 | 3:-85488579 | None:intergenic |
AGTTTGTTGTTATGCATCAG+AGG | 0.584443 | 3:-85490188 | None:intergenic |
TGCAGAACCATTGTTGGAGG+TGG | 0.586637 | 3:-85490444 | None:intergenic |
TCCTGAATTAGAAGCACCAA+GGG | 0.587527 | 3:-85490159 | None:intergenic |
GAGTTTGCATTGGAACAACA+AGG | 0.591725 | 3:-85490334 | None:intergenic |
ATACTGATCCAGAGGCTGGT+AGG | 0.593096 | 3:+85489331 | MsG0380016593.01.T01:CDS |
ACACGATTTGTTGTTGTGAG+AGG | 0.596043 | 3:-85490713 | None:intergenic |
ATCATAATAACACTGAATCC+CGG | 0.598777 | 3:+85490234 | MsG0380016593.01.T01:CDS |
GTATAGTAGTACAGCAACAA+AGG | 0.600003 | 3:-85488175 | None:intergenic |
TTGGTGCTTCTAATTCAGGA+TGG | 0.601100 | 3:+85490162 | MsG0380016593.01.T01:CDS |
ACAAGGGGATTAAGTAAGAG+AGG | 0.605379 | 3:-85490317 | None:intergenic |
GTTTGCATTGGAACAACAAG+GGG | 0.608134 | 3:-85490332 | None:intergenic |
CCTTGGGTAGGTTCAACACC+TGG | 0.615728 | 3:+85490614 | MsG0380016593.01.T01:CDS |
GAAGCATGGAAGCAAATCAA+AGG | 0.616024 | 3:+85488072 | MsG0380016593.01.T01:five_prime_UTR |
TGGATGGTGGTTTCAATCTG+AGG | 0.616315 | 3:+85489292 | MsG0380016593.01.T01:CDS |
TCCCCGTTCAAGAAAGCCTG+TGG | 0.619148 | 3:+85489443 | MsG0380016593.01.T01:CDS |
GGTAGGTGCAGAAGAACAGA+TGG | 0.619651 | 3:+85489348 | MsG0380016593.01.T01:CDS |
GGTCACAGCAGGTGGAATGG+CGG | 0.620189 | 3:+85488902 | MsG0380016593.01.T01:intron |
TCCAAATGTTGCATCATCAA+GGG | 0.620644 | 3:+85490838 | MsG0380016593.01.T01:CDS |
TGGTGCGAATGTTGGAAGCA+TGG | 0.622631 | 3:+85488058 | None:intergenic |
AAATCAAAGGCCGAGAATGG+CGG | 0.623807 | 3:+85488085 | MsG0380016593.01.T01:five_prime_UTR |
CTCCAATCTGAGAAACCAAG+AGG | 0.625201 | 3:+85490356 | MsG0380016593.01.T01:CDS |
GAATGAAAAGGGGCTTGGAG+TGG | 0.630089 | 3:+85490114 | MsG0380016593.01.T01:intron |
TGGCACTTCAGGGACAGGAA+TGG | 0.631431 | 3:+85490745 | MsG0380016593.01.T01:CDS |
TAGTGGATTGGTGCGAATGT+TGG | 0.633501 | 3:+85488050 | None:intergenic |
ACTTCAGCTAGTGGACCACC+AGG | 0.635831 | 3:-85490632 | None:intergenic |
TCCACAGGCTTTCTTGAACG+GGG | 0.635923 | 3:-85489444 | None:intergenic |
TGGAAATGAATTCAGATACC+GGG | 0.640548 | 3:-85490252 | None:intergenic |
AGCAACAAAGGCTAAGCTTG+AGG | 0.640935 | 3:-85488163 | None:intergenic |
TAGGAACAATACTGATCCAG+AGG | 0.641405 | 3:+85489323 | MsG0380016593.01.T01:CDS |
TGATGCAGAACCATTGTTGG+AGG | 0.644016 | 3:-85490447 | None:intergenic |
CATTGAGCAATTGTGAAAGG+AGG | 0.644246 | 3:-85488945 | None:intergenic |
AATCCAGCACAACCTTGGGT+AGG | 0.661395 | 3:+85490602 | MsG0380016593.01.T01:CDS |
AGTTTGCATTGGAACAACAA+GGG | 0.661506 | 3:-85490333 | None:intergenic |
CCAGGTGTTGAACCTACCCA+AGG | 0.666817 | 3:-85490614 | None:intergenic |
ATCCTGAATTAGAAGCACCA+AGG | 0.673204 | 3:-85490160 | None:intergenic |
TCACTTGATCTATCAATGGG+AGG | 0.680795 | 3:+85490491 | MsG0380016593.01.T01:CDS |
TTGGTCTAATGCAGAGACAG+TGG | 0.682367 | 3:+85490397 | MsG0380016593.01.T01:CDS |
TGGGTAGGTTCAACACCTGG+TGG | 0.687244 | 3:+85490617 | MsG0380016593.01.T01:CDS |
TGTGAAAGACATATGCATAG+AGG | 0.723539 | 3:+85489417 | MsG0380016593.01.T01:CDS |
GATTATCAAAGAATGAACGG+TGG | 0.727234 | 3:-85488576 | None:intergenic |
AATGCTATCATTGATAATGG+CGG | 0.749635 | 3:+85488697 | MsG0380016593.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAAAATATGAAATTAATTA+AGG | - | Chr3:85489076-85489095 | None:intergenic | 10.0% |
!! | TTCTAAATATATATATATCT+AGG | - | Chr3:85488240-85488259 | None:intergenic | 10.0% |
!! | ATATATAGAAAAATAAGTAG+TGG | + | Chr3:85488811-85488830 | MsG0380016593.01.T01:intron | 15.0% |
!!! | AAAAAAAATCAAGCTTTATT+TGG | - | Chr3:85489958-85489977 | None:intergenic | 15.0% |
!!! | TAAATAAATGCATTGTTTTA+TGG | + | Chr3:85490044-85490063 | MsG0380016593.01.T01:intron | 15.0% |
!! | AAAAAAGCAGAAAAAGTTAA+TGG | - | Chr3:85489125-85489144 | None:intergenic | 20.0% |
!! | AAAAAGCAGAAAAAGTTAAT+GGG | - | Chr3:85489124-85489143 | None:intergenic | 20.0% |
!! | ATATATATATATCTAGGAGT+AGG | - | Chr3:85488234-85488253 | None:intergenic | 20.0% |
!! | ATGATTAAACTTATTGAGTA+AGG | - | Chr3:85490879-85490898 | None:intergenic | 20.0% |
!!! | TTTCATGTTTTGTTTTGATT+TGG | + | Chr3:85489922-85489941 | MsG0380016593.01.T01:intron | 20.0% |
!!! | TTTCTAGTTTGTTATTGATT+TGG | + | Chr3:85490085-85490104 | MsG0380016593.01.T01:intron | 20.0% |
!!! | TTTGCTTTCATTTTAGTTAT+GGG | + | Chr3:85488418-85488437 | MsG0380016593.01.T01:exon | 20.0% |
! | AAACACAAACTAACCTTTAA+GGG | - | Chr3:85488773-85488792 | None:intergenic | 25.0% |
! | AAGGTAAATAGAATGAAAAG+TGG | - | Chr3:85489181-85489200 | None:intergenic | 25.0% |
! | AATCCAACTACAAGAAAATA+TGG | + | Chr3:85489575-85489594 | MsG0380016593.01.T01:intron | 25.0% |
! | ACAAAACATGAAAGTGAATA+AGG | - | Chr3:85489915-85489934 | None:intergenic | 25.0% |
! | AGAGATTTATGATTGTGTTA+TGG | - | Chr3:85488115-85488134 | None:intergenic | 25.0% |
! | ATAGTCATCATCAAATCAAA+AGG | + | Chr3:85489496-85489515 | MsG0380016593.01.T01:CDS | 25.0% |
! | ATATTGAGTTTGACTAAATC+AGG | + | Chr3:85489754-85489773 | MsG0380016593.01.T01:intron | 25.0% |
! | CATGATTATCAAAGAATGAA+CGG | - | Chr3:85488582-85488601 | None:intergenic | 25.0% |
! | GAGATTTATGATTGTGTTAT+GGG | - | Chr3:85488114-85488133 | None:intergenic | 25.0% |
! | GTGAAAAGGTTGAAAATTTA+AGG | - | Chr3:85488728-85488747 | None:intergenic | 25.0% |
! | TAAACACAAACTAACCTTTA+AGG | - | Chr3:85488774-85488793 | None:intergenic | 25.0% |
! | TAGTCATCATCAAATCAAAA+GGG | + | Chr3:85489497-85489516 | MsG0380016593.01.T01:CDS | 25.0% |
! | TATGATTTACAAGTACTTGA+TGG | + | Chr3:85488989-85489008 | MsG0380016593.01.T01:CDS | 25.0% |
! | TATGCAAAGAAAATGAAGAT+TGG | - | Chr3:85489646-85489665 | None:intergenic | 25.0% |
! | TTTAAGAGTGAATTTCATAG+AGG | - | Chr3:85489984-85490003 | None:intergenic | 25.0% |
! | TTTGGTGAATTGAATGAAAA+GGG | + | Chr3:85490103-85490122 | MsG0380016593.01.T01:intron | 25.0% |
!! | ATTTGGTGAATTGAATGAAA+AGG | + | Chr3:85490102-85490121 | MsG0380016593.01.T01:intron | 25.0% |
!! | CTTACCTCAAAAGTTAATTT+TGG | + | Chr3:85488305-85488324 | MsG0380016593.01.T01:five_prime_UTR | 25.0% |
!! | TATTTTCTTGTAGTTGGATT+AGG | - | Chr3:85489575-85489594 | None:intergenic | 25.0% |
!!! | CAAAATTAACTTTTGAGGTA+AGG | - | Chr3:85488307-85488326 | None:intergenic | 25.0% |
!!! | GTTTGCTTTCATTTTAGTTA+TGG | + | Chr3:85488417-85488436 | MsG0380016593.01.T01:exon | 25.0% |
!!! | TACAAACTTTTGACTCAAAA+TGG | - | Chr3:85489152-85489171 | None:intergenic | 25.0% |
!!! | TGTCTTTGTTTGTTTTGATT+TGG | + | Chr3:85489884-85489903 | MsG0380016593.01.T01:intron | 25.0% |
!!! | TTGTTGTTGGTTTTTTTTGT+AGG | - | Chr3:85488469-85488488 | None:intergenic | 25.0% |
AAAAGACATGTTGTATGTTG+TGG | - | Chr3:85488650-85488669 | None:intergenic | 30.0% | |
AAAGACATGTTGTATGTTGT+GGG | - | Chr3:85488649-85488668 | None:intergenic | 30.0% | |
AAAGCAACACATGATGAAAA+AGG | - | Chr3:85489226-85489245 | None:intergenic | 30.0% | |
AAATGAAAGCAAACACACTT+TGG | - | Chr3:85488411-85488430 | None:intergenic | 30.0% | |
AATAACACTAGTAGTGTTGT+TGG | + | Chr3:85488487-85488506 | MsG0380016593.01.T01:CDS | 30.0% | |
ACAAAGACATAGTACATGTT+TGG | - | Chr3:85489873-85489892 | None:intergenic | 30.0% | |
AGTTCAGAACTGTTATATAG+TGG | - | Chr3:85490275-85490294 | None:intergenic | 30.0% | |
ATACAGATATAAACTCACCT+TGG | - | Chr3:85489698-85489717 | None:intergenic | 30.0% | |
ATACATGAAAGAAGATGAGA+AGG | - | Chr3:85489029-85489048 | None:intergenic | 30.0% | |
ATCATAATAACACTGAATCC+CGG | + | Chr3:85490234-85490253 | MsG0380016593.01.T01:CDS | 30.0% | |
ATTAAGGAAGAAGAGAGAAA+AGG | - | Chr3:85489060-85489079 | None:intergenic | 30.0% | |
ATTATGATAGGAACTTCCAT+TGG | - | Chr3:85490222-85490241 | None:intergenic | 30.0% | |
ATTGAAACTTAAGAAGCAGA+AGG | - | Chr3:85490930-85490949 | None:intergenic | 30.0% | |
CTAAAATAGCATTCTCAAGT+TGG | + | Chr3:85490576-85490595 | MsG0380016593.01.T01:CDS | 30.0% | |
GAAAATGAAGATTGGAGATA+AGG | - | Chr3:85489638-85489657 | None:intergenic | 30.0% | |
GAAGAACAGATGGTAAAAAA+TGG | + | Chr3:85489358-85489377 | MsG0380016593.01.T01:CDS | 30.0% | |
GCTAATGCTATCATTGATAA+TGG | + | Chr3:85488694-85488713 | MsG0380016593.01.T01:CDS | 30.0% | |
TCAATGAAACTAAAACCTCT+TGG | - | Chr3:85490374-85490393 | None:intergenic | 30.0% | |
TCATCACTTGATCTATCAAT+GGG | + | Chr3:85490488-85490507 | MsG0380016593.01.T01:CDS | 30.0% | |
TGATAGATCAAGTGATGAAA+GGG | - | Chr3:85490486-85490505 | None:intergenic | 30.0% | |
TTAAGGAAGAAGAGAGAAAA+GGG | - | Chr3:85489059-85489078 | None:intergenic | 30.0% | |
TTATTATGCAAAACACCAGA+TGG | - | Chr3:85490779-85490798 | None:intergenic | 30.0% | |
TTCATCACTTGATCTATCAA+TGG | + | Chr3:85490487-85490506 | MsG0380016593.01.T01:CDS | 30.0% | |
TTGATAGATCAAGTGATGAA+AGG | - | Chr3:85490487-85490506 | None:intergenic | 30.0% | |
TTGGTGAATTGAATGAAAAG+GGG | + | Chr3:85490104-85490123 | MsG0380016593.01.T01:intron | 30.0% | |
TTTGTCATTGAATCAATGTG+TGG | + | Chr3:85489200-85489219 | MsG0380016593.01.T01:intron | 30.0% | |
! | AACATACAACATGTCTTTTG+GGG | + | Chr3:85488651-85488670 | MsG0380016593.01.T01:CDS | 30.0% |
! | AAGATAGATAGTGGTGTTTA+TGG | - | Chr3:85488284-85488303 | None:intergenic | 30.0% |
! | ACAACATACAACATGTCTTT+TGG | + | Chr3:85488649-85488668 | MsG0380016593.01.T01:CDS | 30.0% |
! | ACCACCAAAATTAACTTTTG+AGG | - | Chr3:85488312-85488331 | None:intergenic | 30.0% |
! | ACCTCAAAAGTTAATTTTGG+TGG | + | Chr3:85488308-85488327 | MsG0380016593.01.T01:five_prime_UTR | 30.0% |
! | ACTACTAGTGTTATTGTTGT+TGG | - | Chr3:85488482-85488501 | None:intergenic | 30.0% |
! | ATAACACTAGTAGTGTTGTT+GGG | + | Chr3:85488488-85488507 | MsG0380016593.01.T01:CDS | 30.0% |
! | CAACATACAACATGTCTTTT+GGG | + | Chr3:85488650-85488669 | MsG0380016593.01.T01:CDS | 30.0% |
! | GATCCATATTTTCTTGTAGT+TGG | - | Chr3:85489581-85489600 | None:intergenic | 30.0% |
! | GGATTCAGTGTTATTATGAT+AGG | - | Chr3:85490234-85490253 | None:intergenic | 30.0% |
! | TGATTTTGTTGAATCCCTTA+AGG | + | Chr3:85489786-85489805 | MsG0380016593.01.T01:intron | 30.0% |
!! | AATGCTATCATTGATAATGG+CGG | + | Chr3:85488697-85488716 | MsG0380016593.01.T01:CDS | 30.0% |
!! | CACATTGATTCAATGACAAA+AGG | - | Chr3:85489200-85489219 | None:intergenic | 30.0% |
!! | CTTTCACAGTACTTGTTATT+AGG | - | Chr3:85489405-85489424 | None:intergenic | 30.0% |
!! | GTTTTATGGTGTTAGTGTTA+TGG | + | Chr3:85490058-85490077 | MsG0380016593.01.T01:intron | 30.0% |
!!! | GTTTTAGTTTCATTGATGCT+TGG | + | Chr3:85490378-85490397 | MsG0380016593.01.T01:CDS | 30.0% |
AACAAACTTGGAATGACCAA+TGG | + | Chr3:85490203-85490222 | MsG0380016593.01.T01:CDS | 35.0% | |
AAGATTGGAGATAAGGATGA+AGG | - | Chr3:85489631-85489650 | None:intergenic | 35.0% | |
AGATTGGAGATAAGGATGAA+GGG | - | Chr3:85489630-85489649 | None:intergenic | 35.0% | |
AGTTTGCATTGGAACAACAA+GGG | - | Chr3:85490336-85490355 | None:intergenic | 35.0% | |
ATAGTGGTGTTTATGGCATA+TGG | - | Chr3:85488277-85488296 | None:intergenic | 35.0% | |
CTGATGCATAACAACAAACT+TGG | + | Chr3:85490191-85490210 | MsG0380016593.01.T01:CDS | 35.0% | |
GAAGCAGAAATGTTGTGAAA+AGG | - | Chr3:85488742-85488761 | None:intergenic | 35.0% | |
GATTATCAAAGAATGAACGG+TGG | - | Chr3:85488579-85488598 | None:intergenic | 35.0% | |
GGATTAAGTAAGAGAGGAAA+GGG | - | Chr3:85490314-85490333 | None:intergenic | 35.0% | |
GGGATTCAACAAAATCACAA+TGG | - | Chr3:85489783-85489802 | None:intergenic | 35.0% | |
GTATAGTAGTACAGCAACAA+AGG | - | Chr3:85488178-85488197 | None:intergenic | 35.0% | |
GTGGAAATGAATTCAGATAC+CGG | - | Chr3:85490256-85490275 | None:intergenic | 35.0% | |
TACTTGTGTTTGTGTGTTTG+TGG | + | Chr3:85488878-85488897 | MsG0380016593.01.T01:intron | 35.0% | |
TCCAAATGTTGCATCATCAA+GGG | + | Chr3:85490838-85490857 | MsG0380016593.01.T01:CDS | 35.0% | |
TGGAAATGAATTCAGATACC+GGG | - | Chr3:85490255-85490274 | None:intergenic | 35.0% | |
TGTGAAAGACATATGCATAG+AGG | + | Chr3:85489417-85489436 | MsG0380016593.01.T01:CDS | 35.0% | |
TTAGAAGATCCAAGCCTTAA+GGG | - | Chr3:85489803-85489822 | None:intergenic | 35.0% | |
TTATTTGTGTGAAGTTCCAC+AGG | - | Chr3:85489462-85489481 | None:intergenic | 35.0% | |
TTTGCATAATAGCAGCTTTG+AGG | + | Chr3:85489658-85489677 | MsG0380016593.01.T01:intron | 35.0% | |
! | ACATACAACATGTCTTTTGG+GGG | + | Chr3:85488652-85488671 | MsG0380016593.01.T01:CDS | 35.0% |
! | GCTTCATTTTCTGATAGTAG+TGG | + | Chr3:85490806-85490825 | MsG0380016593.01.T01:CDS | 35.0% |
! | TCAATCTGAGGCTATCAAAT+AGG | + | Chr3:85489304-85489323 | MsG0380016593.01.T01:CDS | 35.0% |
! | TTTCTTGTAGTTGGATTAGG+AGG | - | Chr3:85489572-85489591 | None:intergenic | 35.0% |
!! | AGAATTTGTTGCATCACTGA+TGG | - | Chr3:85490681-85490700 | None:intergenic | 35.0% |
!! | AGTTTGTTGTTATGCATCAG+AGG | - | Chr3:85490191-85490210 | None:intergenic | 35.0% |
!! | GTTTGTTGTTATGCATCAGA+GGG | - | Chr3:85490190-85490209 | None:intergenic | 35.0% |
!!! | TATCCTTGTTTTTGAAGCAG+TGG | + | Chr3:85489272-85489291 | MsG0380016593.01.T01:intron | 35.0% |
AACCTCTTGGTTTCTCAGAT+TGG | - | Chr3:85490361-85490380 | None:intergenic | 40.0% | |
AACTGATGCAGAACCATTGT+TGG | - | Chr3:85490453-85490472 | None:intergenic | 40.0% | |
AATGGAGATCCAATTTCCCT+TGG | + | Chr3:85490143-85490162 | MsG0380016593.01.T01:CDS | 40.0% | |
ACAAATCGTGTCGAATCCAT+TGG | + | Chr3:85490725-85490744 | MsG0380016593.01.T01:CDS | 40.0% | |
ACAAGGGGATTAAGTAAGAG+AGG | - | Chr3:85490320-85490339 | None:intergenic | 40.0% | |
AGGCTTCAAATAAGCAACCA+AGG | + | Chr3:85489678-85489697 | MsG0380016593.01.T01:intron | 40.0% | |
CATCCACTGCTTCAAAAACA+AGG | - | Chr3:85489278-85489297 | None:intergenic | 40.0% | |
CATTGAGCAATTGTGAAAGG+AGG | - | Chr3:85488948-85488967 | None:intergenic | 40.0% | |
CTCCATTGAGCAATTGTGAA+AGG | - | Chr3:85488951-85488970 | None:intergenic | 40.0% | |
CTCCTTTCACAATTGCTCAA+TGG | + | Chr3:85488946-85488965 | MsG0380016593.01.T01:CDS | 40.0% | |
CTGATGGAAGTAACATTGCT+TGG | - | Chr3:85490665-85490684 | None:intergenic | 40.0% | |
CTTAGAAGATCCAAGCCTTA+AGG | - | Chr3:85489804-85489823 | None:intergenic | 40.0% | |
GAAAGAAGATGAGAAGGAAC+AGG | - | Chr3:85489023-85489042 | None:intergenic | 40.0% | |
GAAGCATGGAAGCAAATCAA+AGG | + | Chr3:85488072-85488091 | MsG0380016593.01.T01:five_prime_UTR | 40.0% | |
GAATTGAATGAAAAGGGGCT+TGG | + | Chr3:85490109-85490128 | MsG0380016593.01.T01:intron | 40.0% | |
GAGGTAAGGAAGATAGATAG+TGG | - | Chr3:85488293-85488312 | None:intergenic | 40.0% | |
GAGTTTGCATTGGAACAACA+AGG | - | Chr3:85490337-85490356 | None:intergenic | 40.0% | |
GATTGGAGATAAGGATGAAG+GGG | - | Chr3:85489629-85489648 | None:intergenic | 40.0% | |
GGAATAGCCACAGTAAAATC+AGG | - | Chr3:85489551-85489570 | None:intergenic | 40.0% | |
GGGATTAAGTAAGAGAGGAA+AGG | - | Chr3:85490315-85490334 | None:intergenic | 40.0% | |
GTCCAAATGTTGCATCATCA+AGG | + | Chr3:85490837-85490856 | MsG0380016593.01.T01:CDS | 40.0% | |
GTTTGCATTGGAACAACAAG+GGG | - | Chr3:85490335-85490354 | None:intergenic | 40.0% | |
TAGGAACAATACTGATCCAG+AGG | + | Chr3:85489323-85489342 | MsG0380016593.01.T01:CDS | 40.0% | |
TCACTTGATCTATCAATGGG+AGG | + | Chr3:85490491-85490510 | MsG0380016593.01.T01:CDS | 40.0% | |
TCAGATTGGAGAGTTTGCAT+TGG | - | Chr3:85490347-85490366 | None:intergenic | 40.0% | |
TTGTGTTTGTGTGTTTGTGG+TGG | + | Chr3:85488881-85488900 | MsG0380016593.01.T01:intron | 40.0% | |
TTGTTGAATCCCTTAAGGCT+TGG | + | Chr3:85489791-85489810 | MsG0380016593.01.T01:intron | 40.0% | |
! | AACAATGGTTCTGCATCAGT+TGG | + | Chr3:85490452-85490471 | MsG0380016593.01.T01:CDS | 40.0% |
! | CTAACCTTTAAGGGTTGTGT+TGG | - | Chr3:85488764-85488783 | None:intergenic | 40.0% |
! | TTCTCTGCCTGATTTTACTG+TGG | + | Chr3:85489541-85489560 | MsG0380016593.01.T01:intron | 40.0% |
! | TTGGTGCTTCTAATTCAGGA+TGG | + | Chr3:85490162-85490181 | MsG0380016593.01.T01:CDS | 40.0% |
!! | ACACGATTTGTTGTTGTGAG+AGG | - | Chr3:85490716-85490735 | None:intergenic | 40.0% |
!! | ATCCTGAATTAGAAGCACCA+AGG | - | Chr3:85490163-85490182 | None:intergenic | 40.0% |
!! | TCCTGAATTAGAAGCACCAA+GGG | - | Chr3:85490162-85490181 | None:intergenic | 40.0% |
!! | TTAGAAGCACCAAGGGAAAT+TGG | - | Chr3:85490155-85490174 | None:intergenic | 40.0% |
!!! | CTTGTTTTTGAAGCAGTGGA+TGG | + | Chr3:85489276-85489295 | MsG0380016593.01.T01:intron | 40.0% |
AAATCAAAGGCCGAGAATGG+CGG | + | Chr3:85488085-85488104 | MsG0380016593.01.T01:five_prime_UTR | 45.0% | |
AACAATACTGATCCAGAGGC+TGG | + | Chr3:85489327-85489346 | MsG0380016593.01.T01:CDS | 45.0% | |
AGCAAATCAAAGGCCGAGAA+TGG | + | Chr3:85488082-85488101 | MsG0380016593.01.T01:five_prime_UTR | 45.0% | |
AGCAACAAAGGCTAAGCTTG+AGG | - | Chr3:85488166-85488185 | None:intergenic | 45.0% | |
ATGGCGGCTTCAATAGGAAT+AGG | + | Chr3:85488918-85488937 | MsG0380016593.01.T01:CDS | 45.0% | |
CATGTCAAGAAGACAGGTGT+TGG | - | Chr3:85488143-85488162 | None:intergenic | 45.0% | |
CTCCAATCTGAGAAACCAAG+AGG | + | Chr3:85490356-85490375 | MsG0380016593.01.T01:CDS | 45.0% | |
GCTGTTGATGCTGAAGGTTA+TGG | + | Chr3:85488622-85488641 | MsG0380016593.01.T01:CDS | 45.0% | |
GCTTCCAACACAACCCTTAA+AGG | + | Chr3:85488757-85488776 | MsG0380016593.01.T01:CDS | 45.0% | |
GGAATGGTATCATCTCCATC+TGG | + | Chr3:85490761-85490780 | MsG0380016593.01.T01:CDS | 45.0% | |
GTCCACTAGCTGAAGTTCTA+AGG | + | Chr3:85490639-85490658 | MsG0380016593.01.T01:CDS | 45.0% | |
GTTCCACAGGCTTTCTTGAA+CGG | - | Chr3:85489449-85489468 | None:intergenic | 45.0% | |
TCGAATCCATTGGCACTTCA+GGG | + | Chr3:85490735-85490754 | MsG0380016593.01.T01:CDS | 45.0% | |
TGAGTTTCGCGTTCAAGACA+AGG | + | Chr3:85488441-85488460 | MsG0380016593.01.T01:CDS | 45.0% | |
TGATGCAGAACCATTGTTGG+AGG | - | Chr3:85490450-85490469 | None:intergenic | 45.0% | |
TGGCGGCTTCAATAGGAATA+GGG | + | Chr3:85488919-85488938 | MsG0380016593.01.T01:CDS | 45.0% | |
TTCCACAGGCTTTCTTGAAC+GGG | - | Chr3:85489448-85489467 | None:intergenic | 45.0% | |
TTGAGGCATGTCAAGAAGAC+AGG | - | Chr3:85488149-85488168 | None:intergenic | 45.0% | |
TTGGTCTAATGCAGAGACAG+TGG | + | Chr3:85490397-85490416 | MsG0380016593.01.T01:CDS | 45.0% | |
! | CACTAGTAGTGTTGTTGGGT+CGG | + | Chr3:85488492-85488511 | MsG0380016593.01.T01:CDS | 45.0% |
! | TGGATGGTGGTTTCAATCTG+AGG | + | Chr3:85489292-85489311 | MsG0380016593.01.T01:CDS | 45.0% |
!! | CAAGAAGACAGGTGTTGGAA+TGG | - | Chr3:85488138-85488157 | None:intergenic | 45.0% |
!! | GCCCTTGATGATGCAACATT+TGG | - | Chr3:85490842-85490861 | None:intergenic | 45.0% |
!! | TCCCTTGGTGCTTCTAATTC+AGG | + | Chr3:85490158-85490177 | MsG0380016593.01.T01:CDS | 45.0% |
!!! | GTTTTTGAAGCAGTGGATGG+TGG | + | Chr3:85489279-85489298 | MsG0380016593.01.T01:intron | 45.0% |
AATCCAGCACAACCTTGGGT+AGG | + | Chr3:85490602-85490621 | MsG0380016593.01.T01:CDS | 50.0% | |
AGAACCATTGTTGGAGGTGG+TGG | - | Chr3:85490444-85490463 | None:intergenic | 50.0% | |
ATACTGATCCAGAGGCTGGT+AGG | + | Chr3:85489331-85489350 | MsG0380016593.01.T01:CDS | 50.0% | |
GAATGAAAAGGGGCTTGGAG+TGG | + | Chr3:85490114-85490133 | MsG0380016593.01.T01:intron | 50.0% | |
GAGATAAGGATGAAGGGGAG+TGG | - | Chr3:85489624-85489643 | None:intergenic | 50.0% | |
GCTCAATCCAGCACAACCTT+GGG | + | Chr3:85490598-85490617 | MsG0380016593.01.T01:CDS | 50.0% | |
GGCCTTAGAACTTCAGCTAG+TGG | - | Chr3:85490644-85490663 | None:intergenic | 50.0% | |
GGTAGGTGCAGAAGAACAGA+TGG | + | Chr3:85489348-85489367 | MsG0380016593.01.T01:CDS | 50.0% | |
GTCGAATCCATTGGCACTTC+AGG | + | Chr3:85490734-85490753 | MsG0380016593.01.T01:CDS | 50.0% | |
TCCACAGGCTTTCTTGAACG+GGG | - | Chr3:85489447-85489466 | None:intergenic | 50.0% | |
TCTGCTGCTGTTGATGCTGA+AGG | + | Chr3:85488616-85488635 | MsG0380016593.01.T01:CDS | 50.0% | |
TGCAGAACCATTGTTGGAGG+TGG | - | Chr3:85490447-85490466 | None:intergenic | 50.0% | |
! | TTATGGGTTGCCGCCATTCT+CGG | - | Chr3:85488098-85488117 | None:intergenic | 50.0% |
ACCACCACCACCTCCAACAA+TGG | + | Chr3:85490437-85490456 | MsG0380016593.01.T01:CDS | 55.0% | |
CCTTGGGTAGGTTCAACACC+TGG | + | Chr3:85490614-85490633 | MsG0380016593.01.T01:CDS | 55.0% | |
GAACCTACCCAAGGTTGTGC+TGG | - | Chr3:85490608-85490627 | None:intergenic | 55.0% | |
GGCTCAATCCAGCACAACCT+TGG | + | Chr3:85490597-85490616 | MsG0380016593.01.T01:CDS | 55.0% | |
GGCTTGGAGTGGATGCTGAA+TGG | + | Chr3:85490125-85490144 | MsG0380016593.01.T01:CDS | 55.0% | |
GGGGGTGATTCTTCTGCTCT+AGG | + | Chr3:85488670-85488689 | MsG0380016593.01.T01:CDS | 55.0% | |
GGTGGAATGGCGGCTTCAAT+AGG | + | Chr3:85488912-85488931 | MsG0380016593.01.T01:CDS | 55.0% | |
GTGTTTGTGGTGGTCACAGC+AGG | + | Chr3:85488891-85488910 | MsG0380016593.01.T01:intron | 55.0% | |
TCCATTGGCACTTCAGGGAC+AGG | + | Chr3:85490740-85490759 | MsG0380016593.01.T01:CDS | 55.0% | |
TCCCCGTTCAAGAAAGCCTG+TGG | + | Chr3:85489443-85489462 | MsG0380016593.01.T01:CDS | 55.0% | |
TGGCACTTCAGGGACAGGAA+TGG | + | Chr3:85490745-85490764 | MsG0380016593.01.T01:CDS | 55.0% | |
TGGGTAGGTTCAACACCTGG+TGG | + | Chr3:85490617-85490636 | MsG0380016593.01.T01:CDS | 55.0% | |
TTTGTGGTGGTCACAGCAGG+TGG | + | Chr3:85488894-85488913 | MsG0380016593.01.T01:intron | 55.0% | |
! | ACCATTGTTGGAGGTGGTGG+TGG | - | Chr3:85490441-85490460 | None:intergenic | 55.0% |
! | ACTTCAGCTAGTGGACCACC+AGG | - | Chr3:85490635-85490654 | None:intergenic | 55.0% |
! | TCCTGTCCCTGAAGTGCCAA+TGG | - | Chr3:85490744-85490763 | None:intergenic | 55.0% |
!! | ATTGTTGGAGGTGGTGGTGG+TGG | - | Chr3:85490438-85490457 | None:intergenic | 55.0% |
!! | CCAGGTGTTGAACCTACCCA+AGG | - | Chr3:85490617-85490636 | None:intergenic | 55.0% |
!! | GGGTCGGTGCAGAGTTTTGA+AGG | + | Chr3:85488508-85488527 | MsG0380016593.01.T01:CDS | 55.0% |
CTTCTGCACCTACCAGCCTC+TGG | - | Chr3:85489342-85489361 | None:intergenic | 60.0% | |
GGTCACAGCAGGTGGAATGG+CGG | + | Chr3:85488902-85488921 | MsG0380016593.01.T01:intron | 60.0% | |
GGTGGTCACAGCAGGTGGAA+TGG | + | Chr3:85488899-85488918 | MsG0380016593.01.T01:intron | 60.0% | |
!! | GGAGGTGGTGGTGGTGGTGT+TGG | - | Chr3:85490432-85490451 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 85488062 | 85491005 | 85488062 | ID=MsG0380016593.01;Name=MsG0380016593.01 |
Chr3 | mRNA | 85488062 | 85491005 | 85488062 | ID=MsG0380016593.01.T01;Parent=MsG0380016593.01;Name=MsG0380016593.01.T01;_AED=0.18;_eAED=0.18;_QI=374|0.33|0.5|1|1|1|4|89|512 |
Chr3 | exon | 85488062 | 85488778 | 85488062 | ID=MsG0380016593.01.T01:exon:11341;Parent=MsG0380016593.01.T01 |
Chr3 | exon | 85488910 | 85489044 | 85488910 | ID=MsG0380016593.01.T01:exon:11342;Parent=MsG0380016593.01.T01 |
Chr3 | exon | 85489292 | 85489559 | 85489292 | ID=MsG0380016593.01.T01:exon:11343;Parent=MsG0380016593.01.T01 |
Chr3 | exon | 85490124 | 85491005 | 85490124 | ID=MsG0380016593.01.T01:exon:11344;Parent=MsG0380016593.01.T01 |
Chr3 | five_prime_UTR | 85488062 | 85488435 | 85488062 | ID=MsG0380016593.01.T01:five_prime_utr;Parent=MsG0380016593.01.T01 |
Chr3 | CDS | 85488436 | 85488778 | 85488436 | ID=MsG0380016593.01.T01:cds;Parent=MsG0380016593.01.T01 |
Chr3 | CDS | 85488910 | 85489044 | 85488910 | ID=MsG0380016593.01.T01:cds;Parent=MsG0380016593.01.T01 |
Chr3 | CDS | 85489292 | 85489559 | 85489292 | ID=MsG0380016593.01.T01:cds;Parent=MsG0380016593.01.T01 |
Chr3 | CDS | 85490124 | 85490916 | 85490124 | ID=MsG0380016593.01.T01:cds;Parent=MsG0380016593.01.T01 |
Chr3 | three_prime_UTR | 85490917 | 85491005 | 85490917 | ID=MsG0380016593.01.T01:three_prime_utr;Parent=MsG0380016593.01.T01 |
Gene Sequence |
Protein sequence |