Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016741.01.T01 | XP_013461539.1 | 98.007 | 602 | 10 | 2 | 1 | 602 | 3 | 602 | 0 | 1198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016741.01.T01 | Q9SRK7 | 77.933 | 571 | 124 | 1 | 13 | 581 | 9 | 579 | 0 | 933 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016741.01.T01 | A0A072V0M1 | 98.007 | 602 | 10 | 2 | 1 | 602 | 3 | 602 | 0.0 | 1198 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380016741.01 | MsG0380015711.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016741.01.T01 | MTR_3g094320 | 98.007 | 602 | 10 | 2 | 1 | 602 | 3 | 602 | 0.0 | 1198 |
| MsG0380016741.01.T01 | MTR_3g075120 | 49.293 | 566 | 241 | 7 | 20 | 583 | 18 | 539 | 1.31e-174 | 506 |
| MsG0380016741.01.T01 | MTR_7g072600 | 80.263 | 76 | 15 | 0 | 205 | 280 | 18 | 93 | 1.28e-31 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016741.01.T01 | AT3G10960 | 77.933 | 571 | 124 | 1 | 13 | 581 | 9 | 579 | 0.0 | 933 |
| MsG0380016741.01.T01 | AT5G50300 | 51.816 | 523 | 212 | 6 | 24 | 546 | 16 | 498 | 0.0 | 523 |
| MsG0380016741.01.T01 | AT5G50300 | 51.916 | 522 | 211 | 6 | 25 | 546 | 34 | 515 | 1.30e-180 | 522 |
Find 185 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACATTGTGTTGAATATT+TGG | 0.076406 | 3:+87277959 | MsG0380016741.01.T01:CDS |
| CTTCCAGGTGGAACGGTTTC+TGG | 0.122948 | 3:+87277178 | MsG0380016741.01.T01:CDS |
| TTGACGTATTCTATTGCTTA+TGG | 0.169383 | 3:+87277916 | MsG0380016741.01.T01:CDS |
| TCGATTCCGGCTTGGGCTAT+TGG | 0.191352 | 3:+87277784 | MsG0380016741.01.T01:CDS |
| TCTATTGCTTATGGGCTTAT+TGG | 0.196928 | 3:+87277925 | MsG0380016741.01.T01:CDS |
| GAAGAATTATTAGTACTATT+TGG | 0.227837 | 3:-87278039 | None:intergenic |
| GCGGCATAGCCCGGGTTAAC+AGG | 0.231130 | 3:-87276695 | None:intergenic |
| TGGGCTTGGTGGGCTGGAAG+TGG | 0.265248 | 3:-87276380 | None:intergenic |
| TTTGTGTGGGCTTGGTGGGC+TGG | 0.270309 | 3:-87276386 | None:intergenic |
| AGTTGTAGTGCTTTAGCATT+TGG | 0.276034 | 3:-87278120 | None:intergenic |
| GGCTTGGTGGGCTGGAAGTG+GGG | 0.285194 | 3:-87276378 | None:intergenic |
| TGACGTATTCTATTGCTTAT+GGG | 0.291944 | 3:+87277917 | MsG0380016741.01.T01:CDS |
| TTAGTACTATTTGGCTCCTT+TGG | 0.300708 | 3:-87278030 | None:intergenic |
| CTCATTCTTCTCAAGTCAAT+GGG | 0.301747 | 3:+87278061 | MsG0380016741.01.T01:CDS |
| CCTCATTGGTTGCTTCATCA+TGG | 0.302903 | 3:+87276769 | MsG0380016741.01.T01:CDS |
| GGGCTTGGTGGGCTGGAAGT+GGG | 0.307342 | 3:-87276379 | None:intergenic |
| ACACTCTGGTTGGGCCTTGT+GGG | 0.309150 | 3:+87277238 | MsG0380016741.01.T01:CDS |
| ACCGTGGCTTCTTCCCTCAT+TGG | 0.312133 | 3:+87276755 | MsG0380016741.01.T01:CDS |
| GAGCTTATTCTAACGGGCTT+TGG | 0.315835 | 3:-87276986 | None:intergenic |
| GGGCTTTGTGTGGGCTTGGT+GGG | 0.322247 | 3:-87276390 | None:intergenic |
| GCAAATTTGCATGAGATATC+AGG | 0.323440 | 3:-87276671 | None:intergenic |
| GTTGGCTTCGATTCCGGCTT+GGG | 0.351004 | 3:+87277777 | MsG0380016741.01.T01:CDS |
| TGGGCTTTGTGTGGGCTTGG+TGG | 0.351560 | 3:-87276391 | None:intergenic |
| TCTCATTCTTCTCAAGTCAA+TGG | 0.352138 | 3:+87278060 | MsG0380016741.01.T01:CDS |
| ATTGTGGTGGGGTCGTTGTT+AGG | 0.353079 | 3:+87277634 | MsG0380016741.01.T01:CDS |
| GCTTGGTGGGCTGGAAGTGG+GGG | 0.354232 | 3:-87276377 | None:intergenic |
| CTCATTGGTTGCTTCATCAT+GGG | 0.356545 | 3:+87276770 | MsG0380016741.01.T01:CDS |
| GAATCACCGGCGGCGGTGTT+AGG | 0.356687 | 3:-87277373 | None:intergenic |
| TTTAGGCCTTGCTCCAGGTA+TGG | 0.357659 | 3:+87276811 | MsG0380016741.01.T01:CDS |
| ACCGTTGTTGGCTTCGATTC+CGG | 0.363246 | 3:+87277771 | MsG0380016741.01.T01:CDS |
| AACACTCTGGTTGGGCCTTG+TGG | 0.368956 | 3:+87277237 | MsG0380016741.01.T01:CDS |
| GTAAACTAACGGTTCCGTTA+AGG | 0.370350 | 3:-87277156 | None:intergenic |
| TGTGTTGAATATTTGGGATT+GGG | 0.370811 | 3:+87277966 | MsG0380016741.01.T01:CDS |
| GACTCAATAAACGCCGTTAC+CGG | 0.371162 | 3:-87277664 | None:intergenic |
| TATGGGCTTATTGGTGGGAT+TGG | 0.373153 | 3:+87277934 | MsG0380016741.01.T01:CDS |
| TAAACTAACGGTTCCGTTAA+GGG | 0.373233 | 3:-87277155 | None:intergenic |
| TTACATTGTGTTGAATATTT+GGG | 0.373652 | 3:+87277960 | MsG0380016741.01.T01:CDS |
| TGTTGGCTTCGATTCCGGCT+TGG | 0.388698 | 3:+87277776 | MsG0380016741.01.T01:CDS |
| AGCCGTTCCGGCACGGAGTT+CGG | 0.388894 | 3:-87276495 | None:intergenic |
| GACAGGAACGTTGTATTCTA+TGG | 0.398225 | 3:+87277534 | MsG0380016741.01.T01:CDS |
| TTAGGCCTTGCTCCAGGTAT+GGG | 0.400907 | 3:+87276812 | MsG0380016741.01.T01:CDS |
| TTCTTACTCATTTCATCAGT+CGG | 0.402497 | 3:+87276935 | MsG0380016741.01.T01:CDS |
| TTGCGACGATCAAGTCTTTA+CGG | 0.404816 | 3:-87276733 | None:intergenic |
| GTGTTGAATATTTGGGATTG+GGG | 0.406876 | 3:+87277967 | MsG0380016741.01.T01:CDS |
| CAAGGCCCAACCAGAGTGTT+GGG | 0.421403 | 3:-87277234 | None:intergenic |
| AGATGGGCTTTGTGTGGGCT+TGG | 0.423297 | 3:-87276394 | None:intergenic |
| CCGTTAAGGGCGGTTATAAC+CGG | 0.427393 | 3:-87277142 | None:intergenic |
| TATTCTATGGCAAGGTTCGC+AGG | 0.427768 | 3:+87277547 | MsG0380016741.01.T01:CDS |
| GCCTCCATTCTAACTGATTC+CGG | 0.430705 | 3:+87276554 | MsG0380016741.01.T01:CDS |
| TTGTGTTGAATATTTGGGAT+TGG | 0.433005 | 3:+87277965 | MsG0380016741.01.T01:CDS |
| AGTTAGAATGGAGGCGTTGA+CGG | 0.433565 | 3:-87276546 | None:intergenic |
| TACACCGTCGTGGGCTTTCA+CGG | 0.434086 | 3:+87276854 | MsG0380016741.01.T01:CDS |
| ATCAAGGTATCGGGCTCGTT+GGG | 0.436910 | 3:+87277056 | MsG0380016741.01.T01:CDS |
| GATCAGTGGTGGAGATTGAT+TGG | 0.437552 | 3:+87277842 | MsG0380016741.01.T01:CDS |
| GCGTTTATTGAGTCTTCAAC+GGG | 0.437581 | 3:+87277673 | MsG0380016741.01.T01:CDS |
| CAAATTTGCCCCTGTTAACC+CGG | 0.439914 | 3:+87276685 | MsG0380016741.01.T01:CDS |
| TTGCTTATGGGCTTATTGGT+GGG | 0.440354 | 3:+87277929 | MsG0380016741.01.T01:CDS |
| TCAAGACAAGCGGCATAGCC+CGG | 0.441522 | 3:-87276704 | None:intergenic |
| ATTGCTTATGGGCTTATTGG+TGG | 0.443433 | 3:+87277928 | MsG0380016741.01.T01:CDS |
| TAAGCGTTTGAGCCCATACC+TGG | 0.449378 | 3:-87276824 | None:intergenic |
| TACCTGGAGCAAGGCCTAAA+GGG | 0.453864 | 3:-87276808 | None:intergenic |
| GCAGGTTTCACCGACGAAAA+CGG | 0.454776 | 3:+87277565 | MsG0380016741.01.T01:CDS |
| AACGGGGATAACGGCGTTGA+CGG | 0.457237 | 3:+87277714 | MsG0380016741.01.T01:CDS |
| TAAGCTCCTCCGCCGGTATC+GGG | 0.458576 | 3:+87277002 | MsG0380016741.01.T01:CDS |
| ATAAGCTCCTCCGCCGGTAT+CGG | 0.462080 | 3:+87277001 | MsG0380016741.01.T01:CDS |
| AGTTTGAGGTAGAGATGGAT+GGG | 0.464799 | 3:-87276619 | None:intergenic |
| TGTTGGGCCGGTACAGTTTG+AGG | 0.465795 | 3:-87276633 | None:intergenic |
| GATAACGGCGTTGACGGTGG+CGG | 0.470469 | 3:+87277720 | MsG0380016741.01.T01:CDS |
| GCGGAGGAGCTTATTCTAAC+GGG | 0.470882 | 3:-87276992 | None:intergenic |
| CTTCAAAACAATCAAGGTAT+CGG | 0.473008 | 3:+87277046 | MsG0380016741.01.T01:CDS |
| TGCGACGATCAAGTCTTTAC+GGG | 0.473171 | 3:-87276732 | None:intergenic |
| GGAACCGTTAGTTTACTTCC+AGG | 0.476049 | 3:+87277163 | MsG0380016741.01.T01:CDS |
| GAAAGCCCAACACTCTGGTT+GGG | 0.477055 | 3:+87277229 | MsG0380016741.01.T01:CDS |
| ATCGGGCTTCAAAACAATCA+AGG | 0.478586 | 3:+87277040 | MsG0380016741.01.T01:CDS |
| AAGAAGCCCGTGATGAGCTT+GGG | 0.478670 | 3:-87277114 | None:intergenic |
| GGTGAGGAAAGTAGCCGTTC+CGG | 0.483396 | 3:-87276507 | None:intergenic |
| CTCCCTTTAGGCCTTGCTCC+AGG | 0.484772 | 3:+87276806 | MsG0380016741.01.T01:CDS |
| CGGCATAGCCCGGGTTAACA+GGG | 0.484866 | 3:-87276694 | None:intergenic |
| TTCAAAACAATCAAGGTATC+GGG | 0.488455 | 3:+87277047 | MsG0380016741.01.T01:CDS |
| AAAGAAGCCCGTGATGAGCT+TGG | 0.488675 | 3:-87277115 | None:intergenic |
| GATGCCACGTCGATTGTGGT+GGG | 0.494246 | 3:+87277622 | MsG0380016741.01.T01:CDS |
| CAGTTTGAGGTAGAGATGGA+TGG | 0.494890 | 3:-87276620 | None:intergenic |
| ATAACGGCGTTGACGGTGGC+GGG | 0.500012 | 3:+87277721 | MsG0380016741.01.T01:CDS |
| CCGGTTATAACCGCCCTTAA+CGG | 0.501073 | 3:+87277142 | MsG0380016741.01.T01:CDS |
| ACAAGGCCCAACCAGAGTGT+TGG | 0.502515 | 3:-87277235 | None:intergenic |
| GTCGTGGGCTTTCACGGCTC+CGG | 0.506156 | 3:+87276860 | MsG0380016741.01.T01:CDS |
| AATCAAGGTATCGGGCTCGT+TGG | 0.506621 | 3:+87277055 | MsG0380016741.01.T01:CDS |
| ATACCTGGAGCAAGGCCTAA+AGG | 0.511435 | 3:-87276809 | None:intergenic |
| GGAAAGCCCAACACTCTGGT+TGG | 0.517673 | 3:+87277228 | MsG0380016741.01.T01:CDS |
| GTGGTTGCCCAAGCTCATCA+CGG | 0.526556 | 3:+87277107 | MsG0380016741.01.T01:CDS |
| GGTGAAAGTGGAGTTACGTT+GGG | 0.530487 | 3:-87276471 | None:intergenic |
| ATCTCTACCTCAAACTGTAC+CGG | 0.533272 | 3:+87276626 | MsG0380016741.01.T01:CDS |
| AAAACTTAACGCACCTGCTG+TGG | 0.535615 | 3:-87277443 | None:intergenic |
| TCCGCCGGAATCAGTTAGAA+TGG | 0.535814 | 3:-87276558 | None:intergenic |
| GTTAGGAACTTCACCGGTAA+CGG | 0.535923 | 3:+87277651 | MsG0380016741.01.T01:CDS |
| TGGTTGCCCAAGCTCATCAC+GGG | 0.536796 | 3:+87277108 | MsG0380016741.01.T01:CDS |
| GTGGACATTCTCGACACGAC+AGG | 0.538088 | 3:+87277517 | MsG0380016741.01.T01:CDS |
| CAAGACAAGCGGCATAGCCC+GGG | 0.539731 | 3:-87276703 | None:intergenic |
| ACGGAGTTCGGTGGTGAAAG+TGG | 0.539970 | 3:-87276483 | None:intergenic |
| ATCACGGGCTTCTTTAGCGC+CGG | 0.540803 | 3:+87277123 | MsG0380016741.01.T01:CDS |
| TACTTCGCTTACACCGTCGT+GGG | 0.542933 | 3:+87276845 | MsG0380016741.01.T01:CDS |
| GAATGGAAAGCCCAACACTC+TGG | 0.545342 | 3:+87277224 | MsG0380016741.01.T01:CDS |
| CACCGAACTCCGTGCCGGAA+CGG | 0.546674 | 3:+87276493 | MsG0380016741.01.T01:CDS |
| ATCAGTGGTGGAGATTGATT+GGG | 0.550445 | 3:+87277843 | MsG0380016741.01.T01:CDS |
| TTCTTCTCAAGTCAATGGGG+TGG | 0.551225 | 3:+87278065 | MsG0380016741.01.T01:CDS |
| ATACTCATGAGCTGAATCAC+CGG | 0.551717 | 3:-87277386 | None:intergenic |
| GTCGGATGCCACGTCGATTG+TGG | 0.557591 | 3:+87277618 | MsG0380016741.01.T01:CDS |
| AGCGAGAGATGGGCTTTGTG+TGG | 0.561400 | 3:-87276400 | None:intergenic |
| TTCAACGGGGATAAGAGAAG+GGG | 0.564344 | 3:+87277687 | MsG0380016741.01.T01:CDS |
| TGAACAGAGAGGGACACAAT+CGG | 0.566224 | 3:-87276594 | None:intergenic |
| GGCGTTTATTGAGTCTTCAA+CGG | 0.566505 | 3:+87277672 | MsG0380016741.01.T01:CDS |
| TAGTTTACTTCCAGGTGGAA+CGG | 0.566620 | 3:+87277171 | MsG0380016741.01.T01:CDS |
| TCACCAGAAACCGTTCCACC+TGG | 0.568299 | 3:-87277181 | None:intergenic |
| GTCGTTGTTAGGAACTTCAC+CGG | 0.568498 | 3:+87277645 | MsG0380016741.01.T01:CDS |
| AGCTCATGAGTATTTCAAGA+AGG | 0.569434 | 3:+87277396 | MsG0380016741.01.T01:CDS |
| ATGAGCTGAATCACCGGCGG+CGG | 0.573355 | 3:-87277380 | None:intergenic |
| CATGATGAAGCAACCAATGA+GGG | 0.573818 | 3:-87276768 | None:intergenic |
| TAGGTGTTGAAGCGAGAGAT+GGG | 0.574642 | 3:-87276410 | None:intergenic |
| TGTTGAATATTTGGGATTGG+GGG | 0.574721 | 3:+87277968 | MsG0380016741.01.T01:CDS |
| GTAGGTGTTGAAGCGAGAGA+TGG | 0.577020 | 3:-87276411 | None:intergenic |
| TTGGGCTTTCCATTCTATCA+CGG | 0.579130 | 3:-87277216 | None:intergenic |
| GCGTTTCCTAACACCGCCGC+CGG | 0.580860 | 3:+87277367 | MsG0380016741.01.T01:CDS |
| TTCACCACCGAACTCCGTGC+CGG | 0.584018 | 3:+87276488 | MsG0380016741.01.T01:CDS |
| TTTGATGATGAGATCAGTGG+TGG | 0.585140 | 3:+87277831 | MsG0380016741.01.T01:CDS |
| GCTGAATGAGATGAAGTGTT+GGG | 0.585209 | 3:-87276649 | None:intergenic |
| GGCTGAATGAGATGAAGTGT+TGG | 0.586143 | 3:-87276650 | None:intergenic |
| GCGAGAGATGGGCTTTGTGT+GGG | 0.587534 | 3:-87276399 | None:intergenic |
| GTGAAAGGAGCAATGATCTA+CGG | 0.592507 | 3:+87277295 | MsG0380016741.01.T01:CDS |
| GGGGATAACGGCGTTGACGG+TGG | 0.593326 | 3:+87277717 | MsG0380016741.01.T01:CDS |
| GGATGCCACGTCGATTGTGG+TGG | 0.594421 | 3:+87277621 | MsG0380016741.01.T01:CDS |
| TACGTAGCTAAAACAAGACT+AGG | 0.594536 | 3:+87276431 | MsG0380016741.01.T01:CDS |
| GGTACAGTTTGAGGTAGAGA+TGG | 0.595273 | 3:-87276624 | None:intergenic |
| ACCAATGAGGGAAGAAGCCA+CGG | 0.598545 | 3:-87276756 | None:intergenic |
| TTACTTCGCTTACACCGTCG+TGG | 0.599820 | 3:+87276844 | MsG0380016741.01.T01:CDS |
| CTTCAACGGGGATAAGAGAA+GGG | 0.601128 | 3:+87277686 | MsG0380016741.01.T01:CDS |
| TTGAGCCCATACCTGGAGCA+AGG | 0.601157 | 3:-87276817 | None:intergenic |
| TCTTCAACGGGGATAAGAGA+AGG | 0.601843 | 3:+87277685 | MsG0380016741.01.T01:CDS |
| GGCGGAGGAGCTTATTCTAA+CGG | 0.607380 | 3:-87276993 | None:intergenic |
| ACCACCGAGTGTGACTAAAG+TGG | 0.607913 | 3:-87277089 | None:intergenic |
| AACGGCTACTTTCCTCACCA+TGG | 0.608652 | 3:+87276511 | MsG0380016741.01.T01:CDS |
| GAATGGAGGCGTTGACGGCG+AGG | 0.609867 | 3:-87276541 | None:intergenic |
| AAATTTGCCCCTGTTAACCC+GGG | 0.610985 | 3:+87276686 | MsG0380016741.01.T01:CDS |
| TAAGCAATAGAATACGTCAA+AGG | 0.613028 | 3:-87277913 | None:intergenic |
| TGGTGAAAGTGGAGTTACGT+TGG | 0.613545 | 3:-87276472 | None:intergenic |
| GGAAAGTAGCCGTTCCGGCA+CGG | 0.613745 | 3:-87276502 | None:intergenic |
| TGCTGCGAGTGCACTTTGGT+AGG | 0.617484 | 3:-87276891 | None:intergenic |
| GGAAACAGAGCATGTTCCGC+CGG | 0.618328 | 3:-87276573 | None:intergenic |
| TGGATGGGTTTGAACAGAGA+GGG | 0.620381 | 3:-87276604 | None:intergenic |
| AGTATCATTGTCATAAACGC+AGG | 0.621105 | 3:-87277886 | None:intergenic |
| AAACTGCTGCGAGTGCACTT+TGG | 0.621528 | 3:-87276895 | None:intergenic |
| GTCAAACTGATCAACCTCAA+AGG | 0.625363 | 3:+87276354 | MsG0380016741.01.T01:CDS |
| GTTTCGAAACACGAAAGTAA+CGG | 0.626465 | 3:+87277345 | MsG0380016741.01.T01:CDS |
| TCATGAGTATTTCAAGAAGG+TGG | 0.628281 | 3:+87277399 | MsG0380016741.01.T01:CDS |
| CGATTATAATAAAGCCCACA+AGG | 0.628686 | 3:-87277252 | None:intergenic |
| ACCGTTAGTTTACTTCCAGG+TGG | 0.631433 | 3:+87277166 | MsG0380016741.01.T01:CDS |
| AAACTGCATACTCAAATGGA+GGG | 0.632040 | 3:+87276332 | None:intergenic |
| GAACGTTGTATTCTATGGCA+AGG | 0.632846 | 3:+87277539 | MsG0380016741.01.T01:CDS |
| CACACGATAAAATCCACAGC+AGG | 0.633084 | 3:+87277430 | MsG0380016741.01.T01:CDS |
| TCATCCACTTTAGTCACACT+CGG | 0.635622 | 3:+87277085 | MsG0380016741.01.T01:CDS |
| AATGAGATGAAGTGTTGGGC+CGG | 0.636832 | 3:-87276645 | None:intergenic |
| CCATGATGAAGCAACCAATG+AGG | 0.637485 | 3:-87276769 | None:intergenic |
| GGTGGTCCAATAGCCCAAGC+CGG | 0.637635 | 3:-87277790 | None:intergenic |
| AGACTTGATCGTCGCAACCG+TGG | 0.637658 | 3:+87276739 | MsG0380016741.01.T01:CDS |
| GACGGCGAGGATGTAAGCCA+TGG | 0.639305 | 3:-87276528 | None:intergenic |
| GCCGGAATCGAAGCCAACAA+CGG | 0.641962 | 3:-87277772 | None:intergenic |
| CGAGGATGTAAGCCATGGTG+AGG | 0.641965 | 3:-87276523 | None:intergenic |
| CGTTCCGGCACGGAGTTCGG+TGG | 0.642018 | 3:-87276492 | None:intergenic |
| TCATTCTTCTCAAGTCAATG+GGG | 0.646763 | 3:+87278062 | MsG0380016741.01.T01:CDS |
| AAAACTCCCACTAAAATCAA+CGG | 0.651104 | 3:-87277811 | None:intergenic |
| GGCATAGCCCGGGTTAACAG+GGG | 0.652581 | 3:-87276693 | None:intergenic |
| TCCACCTGGAAGTAAACTAA+CGG | 0.660353 | 3:-87277167 | None:intergenic |
| GTTAGAATAAGCTCCTCCGC+CGG | 0.662382 | 3:+87276995 | MsG0380016741.01.T01:CDS |
| GCCGGAATCAGTTAGAATGG+AGG | 0.674641 | 3:-87276555 | None:intergenic |
| ATGCCACGTCGATTGTGGTG+GGG | 0.676120 | 3:+87277623 | MsG0380016741.01.T01:CDS |
| CGACCCCACCACAATCGACG+TGG | 0.676358 | 3:-87277626 | None:intergenic |
| ATGGATGGGTTTGAACAGAG+AGG | 0.686685 | 3:-87276605 | None:intergenic |
| TCCACTTTAGTCACACTCGG+TGG | 0.687536 | 3:+87277088 | MsG0380016741.01.T01:CDS |
| TCCATTCTAACTGATTCCGG+CGG | 0.703938 | 3:+87276557 | MsG0380016741.01.T01:CDS |
| ACTTTGGTAGGAGATAGTGC+CGG | 0.710919 | 3:-87276879 | None:intergenic |
| CTCATGAGCTGAATCACCGG+CGG | 0.724265 | 3:-87277383 | None:intergenic |
| TCAACGGGGATAAGAGAAGG+GGG | 0.727255 | 3:+87277688 | MsG0380016741.01.T01:CDS |
| ACTCCCACTAAAATCAACGG+TGG | 0.739508 | 3:-87277808 | None:intergenic |
| ACTAACGGTTCCGTTAAGGG+CGG | 0.739734 | 3:-87277152 | None:intergenic |
| GGAGCCGTGAAAGCCCACGA+CGG | 0.749184 | 3:-87276858 | None:intergenic |
| CGTTTATTGAGTCTTCAACG+GGG | 0.769550 | 3:+87277674 | MsG0380016741.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAGAATTATTAGTACTATT+TGG | - | Chr3:87278042-87278061 | None:intergenic | 20.0% |
| !! | TTACATTGTGTTGAATATTT+GGG | + | Chr3:87277960-87277979 | MsG0380016741.01.T01:CDS | 20.0% |
| ! | CTTACATTGTGTTGAATATT+TGG | + | Chr3:87277959-87277978 | MsG0380016741.01.T01:CDS | 25.0% |
| ! | TGTTTAGTAAAAAACGTGAA+AGG | + | Chr3:87277280-87277299 | MsG0380016741.01.T01:CDS | 25.0% |
| !! | ACAATATTTTGCGTTTATGT+CGG | + | Chr3:87277600-87277619 | MsG0380016741.01.T01:CDS | 25.0% |
| AAAACTCCCACTAAAATCAA+CGG | - | Chr3:87277814-87277833 | None:intergenic | 30.0% | |
| CTTCAAAACAATCAAGGTAT+CGG | + | Chr3:87277046-87277065 | MsG0380016741.01.T01:CDS | 30.0% | |
| TAAGCAATAGAATACGTCAA+AGG | - | Chr3:87277916-87277935 | None:intergenic | 30.0% | |
| TGACGTATTCTATTGCTTAT+GGG | + | Chr3:87277917-87277936 | MsG0380016741.01.T01:CDS | 30.0% | |
| TTCTTACTCATTTCATCAGT+CGG | + | Chr3:87276935-87276954 | MsG0380016741.01.T01:CDS | 30.0% | |
| TTGACGTATTCTATTGCTTA+TGG | + | Chr3:87277916-87277935 | MsG0380016741.01.T01:CDS | 30.0% | |
| ! | TGTGGTAACATTTTTATACG+TGG | + | Chr3:87277498-87277517 | MsG0380016741.01.T01:CDS | 30.0% |
| ! | TGTGTTGAATATTTGGGATT+GGG | + | Chr3:87277966-87277985 | MsG0380016741.01.T01:CDS | 30.0% |
| ! | TTCAAAACAATCAAGGTATC+GGG | + | Chr3:87277047-87277066 | MsG0380016741.01.T01:CDS | 30.0% |
| ! | TTGTGTTGAATATTTGGGAT+TGG | + | Chr3:87277965-87277984 | MsG0380016741.01.T01:CDS | 30.0% |
| !! | AGTTTTAACAGCATAGGAAA+AGG | + | Chr3:87277460-87277479 | MsG0380016741.01.T01:CDS | 30.0% |
| !! | GTTTTAACAGCATAGGAAAA+GGG | + | Chr3:87277461-87277480 | MsG0380016741.01.T01:CDS | 30.0% |
| !!! | CATAGGAAAAGGGTATTTTT+GGG | + | Chr3:87277471-87277490 | MsG0380016741.01.T01:CDS | 30.0% |
| AGCTCATGAGTATTTCAAGA+AGG | + | Chr3:87277396-87277415 | MsG0380016741.01.T01:CDS | 35.0% | |
| AGTATCATTGTCATAAACGC+AGG | - | Chr3:87277889-87277908 | None:intergenic | 35.0% | |
| AGTTGTAGTGCTTTAGCATT+TGG | - | Chr3:87278123-87278142 | None:intergenic | 35.0% | |
| CGATTATAATAAAGCCCACA+AGG | - | Chr3:87277255-87277274 | None:intergenic | 35.0% | |
| CTCATTCTTCTCAAGTCAAT+GGG | + | Chr3:87278061-87278080 | MsG0380016741.01.T01:CDS | 35.0% | |
| GCAAATTTGCATGAGATATC+AGG | - | Chr3:87276674-87276693 | None:intergenic | 35.0% | |
| GTTCGTTACAAAAACACCAA+AGG | + | Chr3:87278014-87278033 | MsG0380016741.01.T01:CDS | 35.0% | |
| GTTTCGAAACACGAAAGTAA+CGG | + | Chr3:87277345-87277364 | MsG0380016741.01.T01:CDS | 35.0% | |
| TAAACTAACGGTTCCGTTAA+GGG | - | Chr3:87277158-87277177 | None:intergenic | 35.0% | |
| TACGTAGCTAAAACAAGACT+AGG | + | Chr3:87276431-87276450 | MsG0380016741.01.T01:CDS | 35.0% | |
| TCATGAGTATTTCAAGAAGG+TGG | + | Chr3:87277399-87277418 | MsG0380016741.01.T01:CDS | 35.0% | |
| TCATTCTTCTCAAGTCAATG+GGG | + | Chr3:87278062-87278081 | MsG0380016741.01.T01:CDS | 35.0% | |
| TCTATTGCTTATGGGCTTAT+TGG | + | Chr3:87277925-87277944 | MsG0380016741.01.T01:CDS | 35.0% | |
| TCTCATTCTTCTCAAGTCAA+TGG | + | Chr3:87278060-87278079 | MsG0380016741.01.T01:CDS | 35.0% | |
| ! | ATTTTGTCTCCGTGATAGAA+TGG | + | Chr3:87277207-87277226 | MsG0380016741.01.T01:CDS | 35.0% |
| ! | CTCAAAATTTCCGTTTTCGT+CGG | - | Chr3:87277578-87277597 | None:intergenic | 35.0% |
| ! | GACGAAAACGGAAATTTTGA+GGG | + | Chr3:87277577-87277596 | MsG0380016741.01.T01:CDS | 35.0% |
| ! | GTGTTGAATATTTGGGATTG+GGG | + | Chr3:87277967-87277986 | MsG0380016741.01.T01:CDS | 35.0% |
| ! | TGTTGAATATTTGGGATTGG+GGG | + | Chr3:87277968-87277987 | MsG0380016741.01.T01:CDS | 35.0% |
| ! | TTAGTACTATTTGGCTCCTT+TGG | - | Chr3:87278033-87278052 | None:intergenic | 35.0% |
| ! | TTTTCGTAACAGCAATTTCG+TGG | + | Chr3:87277323-87277342 | MsG0380016741.01.T01:CDS | 35.0% |
| !! | GCGTTAAGTTTTAACAGCAT+AGG | + | Chr3:87277454-87277473 | MsG0380016741.01.T01:CDS | 35.0% |
| !!! | AGTTTTGATGATGAGATCAG+TGG | + | Chr3:87277828-87277847 | MsG0380016741.01.T01:CDS | 35.0% |
| !!! | GCATAGGAAAAGGGTATTTT+TGG | + | Chr3:87277470-87277489 | MsG0380016741.01.T01:CDS | 35.0% |
| !!! | GTTGTTTTTTACACCGTTGT+TGG | + | Chr3:87277759-87277778 | MsG0380016741.01.T01:CDS | 35.0% |
| !!! | TAGTCTTGTTTTAGCTACGT+AGG | - | Chr3:87276432-87276451 | None:intergenic | 35.0% |
| ATACTCATGAGCTGAATCAC+CGG | - | Chr3:87277389-87277408 | None:intergenic | 40.0% | |
| ATCGGGCTTCAAAACAATCA+AGG | + | Chr3:87277040-87277059 | MsG0380016741.01.T01:CDS | 40.0% | |
| ATCTCTACCTCAAACTGTAC+CGG | + | Chr3:87276626-87276645 | MsG0380016741.01.T01:CDS | 40.0% | |
| ATTGCTTATGGGCTTATTGG+TGG | + | Chr3:87277928-87277947 | MsG0380016741.01.T01:CDS | 40.0% | |
| CATGATGAAGCAACCAATGA+GGG | - | Chr3:87276771-87276790 | None:intergenic | 40.0% | |
| CGTTTATTGAGTCTTCAACG+GGG | + | Chr3:87277674-87277693 | MsG0380016741.01.T01:CDS | 40.0% | |
| GAACGTTGTATTCTATGGCA+AGG | + | Chr3:87277539-87277558 | MsG0380016741.01.T01:CDS | 40.0% | |
| GACAGGAACGTTGTATTCTA+TGG | + | Chr3:87277534-87277553 | MsG0380016741.01.T01:CDS | 40.0% | |
| GCGTTTATTGAGTCTTCAAC+GGG | + | Chr3:87277673-87277692 | MsG0380016741.01.T01:CDS | 40.0% | |
| GGCGTTTATTGAGTCTTCAA+CGG | + | Chr3:87277672-87277691 | MsG0380016741.01.T01:CDS | 40.0% | |
| GTAAACTAACGGTTCCGTTA+AGG | - | Chr3:87277159-87277178 | None:intergenic | 40.0% | |
| GTCAAACTGATCAACCTCAA+AGG | + | Chr3:87276354-87276373 | MsG0380016741.01.T01:CDS | 40.0% | |
| GTGAAAGGAGCAATGATCTA+CGG | + | Chr3:87277295-87277314 | MsG0380016741.01.T01:CDS | 40.0% | |
| TAGTTTACTTCCAGGTGGAA+CGG | + | Chr3:87277171-87277190 | MsG0380016741.01.T01:CDS | 40.0% | |
| TCATCCACTTTAGTCACACT+CGG | + | Chr3:87277085-87277104 | MsG0380016741.01.T01:CDS | 40.0% | |
| TCCACCTGGAAGTAAACTAA+CGG | - | Chr3:87277170-87277189 | None:intergenic | 40.0% | |
| TTGCGACGATCAAGTCTTTA+CGG | - | Chr3:87276736-87276755 | None:intergenic | 40.0% | |
| TTGCTTATGGGCTTATTGGT+GGG | + | Chr3:87277929-87277948 | MsG0380016741.01.T01:CDS | 40.0% | |
| TTGGGCTTTCCATTCTATCA+CGG | - | Chr3:87277219-87277238 | None:intergenic | 40.0% | |
| ! | AGTTTGAGGTAGAGATGGAT+GGG | - | Chr3:87276622-87276641 | None:intergenic | 40.0% |
| ! | ATCAGTGGTGGAGATTGATT+GGG | + | Chr3:87277843-87277862 | MsG0380016741.01.T01:CDS | 40.0% |
| ! | CGACGAAAACGGAAATTTTG+AGG | + | Chr3:87277576-87277595 | MsG0380016741.01.T01:CDS | 40.0% |
| ! | CTCATTGGTTGCTTCATCAT+GGG | + | Chr3:87276770-87276789 | MsG0380016741.01.T01:CDS | 40.0% |
| ! | GCTGAATGAGATGAAGTGTT+GGG | - | Chr3:87276652-87276671 | None:intergenic | 40.0% |
| ! | GCTTTTGCTAATCTCCCTTT+AGG | + | Chr3:87276794-87276813 | MsG0380016741.01.T01:CDS | 40.0% |
| !! | ACGGGTTTTATCAAGACAAG+CGG | - | Chr3:87276717-87276736 | None:intergenic | 40.0% |
| !! | ATTGGGGGTTTGAGATTTTG+GGG | + | Chr3:87277983-87278002 | MsG0380016741.01.T01:CDS | 40.0% |
| !! | GATTGGGGGTTTGAGATTTT+GGG | + | Chr3:87277982-87278001 | MsG0380016741.01.T01:CDS | 40.0% |
| !! | TTTGATGATGAGATCAGTGG+TGG | + | Chr3:87277831-87277850 | MsG0380016741.01.T01:CDS | 40.0% |
| !!! | TTGAGATTTTGGGGCACTAT+GGG | + | Chr3:87277992-87278011 | MsG0380016741.01.T01:CDS | 40.0% |
| !!! | TTTGAGATTTTGGGGCACTA+TGG | + | Chr3:87277991-87278010 | MsG0380016741.01.T01:CDS | 40.0% |
| AAAACTTAACGCACCTGCTG+TGG | - | Chr3:87277446-87277465 | None:intergenic | 45.0% | |
| AAATTTGCCCCTGTTAACCC+GGG | + | Chr3:87276686-87276705 | MsG0380016741.01.T01:CDS | 45.0% | |
| ACTCCCACTAAAATCAACGG+TGG | - | Chr3:87277811-87277830 | None:intergenic | 45.0% | |
| ACTTTGGTAGGAGATAGTGC+CGG | - | Chr3:87276882-87276901 | None:intergenic | 45.0% | |
| ATAAGAGAAGGGGGAAGAAC+GGG | + | Chr3:87277697-87277716 | MsG0380016741.01.T01:CDS | 45.0% | |
| CAAATTTGCCCCTGTTAACC+CGG | + | Chr3:87276685-87276704 | MsG0380016741.01.T01:CDS | 45.0% | |
| CACACGATAAAATCCACAGC+AGG | + | Chr3:87277430-87277449 | MsG0380016741.01.T01:CDS | 45.0% | |
| CCATGATGAAGCAACCAATG+AGG | - | Chr3:87276772-87276791 | None:intergenic | 45.0% | |
| CTTCAACGGGGATAAGAGAA+GGG | + | Chr3:87277686-87277705 | MsG0380016741.01.T01:CDS | 45.0% | |
| GACTCAATAAACGCCGTTAC+CGG | - | Chr3:87277667-87277686 | None:intergenic | 45.0% | |
| GATAAGAGAAGGGGGAAGAA+CGG | + | Chr3:87277696-87277715 | MsG0380016741.01.T01:CDS | 45.0% | |
| GGCTGAATGAGATGAAGTGT+TGG | - | Chr3:87276653-87276672 | None:intergenic | 45.0% | |
| GGTGAAAGTGGAGTTACGTT+GGG | - | Chr3:87276474-87276493 | None:intergenic | 45.0% | |
| GTCGTTGTTAGGAACTTCAC+CGG | + | Chr3:87277645-87277664 | MsG0380016741.01.T01:CDS | 45.0% | |
| GTTAGGAACTTCACCGGTAA+CGG | + | Chr3:87277651-87277670 | MsG0380016741.01.T01:CDS | 45.0% | |
| TATGGGCTTATTGGTGGGAT+TGG | + | Chr3:87277934-87277953 | MsG0380016741.01.T01:CDS | 45.0% | |
| TATTCTATGGCAAGGTTCGC+AGG | + | Chr3:87277547-87277566 | MsG0380016741.01.T01:CDS | 45.0% | |
| TCTTCAACGGGGATAAGAGA+AGG | + | Chr3:87277685-87277704 | MsG0380016741.01.T01:CDS | 45.0% | |
| TGAACAGAGAGGGACACAAT+CGG | - | Chr3:87276597-87276616 | None:intergenic | 45.0% | |
| TGCGACGATCAAGTCTTTAC+GGG | - | Chr3:87276735-87276754 | None:intergenic | 45.0% | |
| TGGTGAAAGTGGAGTTACGT+TGG | - | Chr3:87276475-87276494 | None:intergenic | 45.0% | |
| TTCAACGGGGATAAGAGAAG+GGG | + | Chr3:87277687-87277706 | MsG0380016741.01.T01:CDS | 45.0% | |
| TTCTTCTCAAGTCAATGGGG+TGG | + | Chr3:87278065-87278084 | MsG0380016741.01.T01:CDS | 45.0% | |
| ! | ACCGTTAGTTTACTTCCAGG+TGG | + | Chr3:87277166-87277185 | MsG0380016741.01.T01:CDS | 45.0% |
| ! | ATGGATGGGTTTGAACAGAG+AGG | - | Chr3:87276608-87276627 | None:intergenic | 45.0% |
| ! | CAGTTTGAGGTAGAGATGGA+TGG | - | Chr3:87276623-87276642 | None:intergenic | 45.0% |
| ! | CCTCATTGGTTGCTTCATCA+TGG | + | Chr3:87276769-87276788 | MsG0380016741.01.T01:CDS | 45.0% |
| ! | GATCAGTGGTGGAGATTGAT+TGG | + | Chr3:87277842-87277861 | MsG0380016741.01.T01:CDS | 45.0% |
| ! | GCCTCCATTCTAACTGATTC+CGG | + | Chr3:87276554-87276573 | MsG0380016741.01.T01:CDS | 45.0% |
| ! | GGAACCGTTAGTTTACTTCC+AGG | + | Chr3:87277163-87277182 | MsG0380016741.01.T01:CDS | 45.0% |
| ! | GGTACAGTTTGAGGTAGAGA+TGG | - | Chr3:87276627-87276646 | None:intergenic | 45.0% |
| ! | TCCATTCTAACTGATTCCGG+CGG | + | Chr3:87276557-87276576 | MsG0380016741.01.T01:CDS | 45.0% |
| ! | TGGATGGGTTTGAACAGAGA+GGG | - | Chr3:87276607-87276626 | None:intergenic | 45.0% |
| !! | AATGAGATGAAGTGTTGGGC+CGG | - | Chr3:87276648-87276667 | None:intergenic | 45.0% |
| !! | AGTTAGAATGGAGGCGTTGA+CGG | - | Chr3:87276549-87276568 | None:intergenic | 45.0% |
| !! | GAGCTTATTCTAACGGGCTT+TGG | - | Chr3:87276989-87277008 | None:intergenic | 45.0% |
| !! | GGATTGGGGGTTTGAGATTT+TGG | + | Chr3:87277981-87278000 | MsG0380016741.01.T01:CDS | 45.0% |
| !! | GGCTTTTTCTCGCTTTCATC+GGG | + | Chr3:87277023-87277042 | MsG0380016741.01.T01:CDS | 45.0% |
| !! | GGGCTTTTTCTCGCTTTCAT+CGG | + | Chr3:87277022-87277041 | MsG0380016741.01.T01:CDS | 45.0% |
| !! | TAGGTGTTGAAGCGAGAGAT+GGG | - | Chr3:87276413-87276432 | None:intergenic | 45.0% |
| !!! | AGGGTATTTTTGGGAAGCTG+TGG | + | Chr3:87277480-87277499 | MsG0380016741.01.T01:CDS | 45.0% |
| !!! | GGACCACCGTTGATTTTAGT+GGG | + | Chr3:87277805-87277824 | MsG0380016741.01.T01:CDS | 45.0% |
| !!! | GGTGGCGGGTTATTTTTTCA+TGG | + | Chr3:87277735-87277754 | MsG0380016741.01.T01:CDS | 45.0% |
| !!! | TGGACCACCGTTGATTTTAG+TGG | + | Chr3:87277804-87277823 | MsG0380016741.01.T01:CDS | 45.0% |
| AAACTGCTGCGAGTGCACTT+TGG | - | Chr3:87276898-87276917 | None:intergenic | 50.0% | |
| AAAGAAGCCCGTGATGAGCT+TGG | - | Chr3:87277118-87277137 | None:intergenic | 50.0% | |
| AAGAAGCCCGTGATGAGCTT+GGG | - | Chr3:87277117-87277136 | None:intergenic | 50.0% | |
| ACCAATGAGGGAAGAAGCCA+CGG | - | Chr3:87276759-87276778 | None:intergenic | 50.0% | |
| ACCACCGAGTGTGACTAAAG+TGG | - | Chr3:87277092-87277111 | None:intergenic | 50.0% | |
| ACTAACGGTTCCGTTAAGGG+CGG | - | Chr3:87277155-87277174 | None:intergenic | 50.0% | |
| AGCGAGAAAAAGCCCGATAC+CGG | - | Chr3:87277017-87277036 | None:intergenic | 50.0% | |
| ATACCTGGAGCAAGGCCTAA+AGG | - | Chr3:87276812-87276831 | None:intergenic | 50.0% | |
| CCGGTTATAACCGCCCTTAA+CGG | + | Chr3:87277142-87277161 | MsG0380016741.01.T01:CDS | 50.0% | |
| CCGTTAAGGGCGGTTATAAC+CGG | - | Chr3:87277145-87277164 | None:intergenic | 50.0% | |
| GAAAGCCCAACACTCTGGTT+GGG | + | Chr3:87277229-87277248 | MsG0380016741.01.T01:CDS | 50.0% | |
| GAATGGAAAGCCCAACACTC+TGG | + | Chr3:87277224-87277243 | MsG0380016741.01.T01:CDS | 50.0% | |
| GCAGGTTTCACCGACGAAAA+CGG | + | Chr3:87277565-87277584 | MsG0380016741.01.T01:CDS | 50.0% | |
| GCCGGAATCAGTTAGAATGG+AGG | - | Chr3:87276558-87276577 | None:intergenic | 50.0% | |
| GCGGAGGAGCTTATTCTAAC+GGG | - | Chr3:87276995-87277014 | None:intergenic | 50.0% | |
| GGCGGAGGAGCTTATTCTAA+CGG | - | Chr3:87276996-87277015 | None:intergenic | 50.0% | |
| GTTAGAATAAGCTCCTCCGC+CGG | + | Chr3:87276995-87277014 | MsG0380016741.01.T01:CDS | 50.0% | |
| TAAGAGAAGGGGGAAGAACG+GGG | + | Chr3:87277698-87277717 | MsG0380016741.01.T01:CDS | 50.0% | |
| TAAGCGTTTGAGCCCATACC+TGG | - | Chr3:87276827-87276846 | None:intergenic | 50.0% | |
| TACCTGGAGCAAGGCCTAAA+GGG | - | Chr3:87276811-87276830 | None:intergenic | 50.0% | |
| TACTTCGCTTACACCGTCGT+GGG | + | Chr3:87276845-87276864 | MsG0380016741.01.T01:CDS | 50.0% | |
| TCAACGGGGATAAGAGAAGG+GGG | + | Chr3:87277688-87277707 | MsG0380016741.01.T01:CDS | 50.0% | |
| TCCACTTTAGTCACACTCGG+TGG | + | Chr3:87277088-87277107 | MsG0380016741.01.T01:CDS | 50.0% | |
| TCCGCCGGAATCAGTTAGAA+TGG | - | Chr3:87276561-87276580 | None:intergenic | 50.0% | |
| TTACTTCGCTTACACCGTCG+TGG | + | Chr3:87276844-87276863 | MsG0380016741.01.T01:CDS | 50.0% | |
| TTAGGCCTTGCTCCAGGTAT+GGG | + | Chr3:87276812-87276831 | MsG0380016741.01.T01:CDS | 50.0% | |
| TTTAGGCCTTGCTCCAGGTA+TGG | + | Chr3:87276811-87276830 | MsG0380016741.01.T01:CDS | 50.0% | |
| ! | AACGGCTACTTTCCTCACCA+TGG | + | Chr3:87276511-87276530 | MsG0380016741.01.T01:CDS | 50.0% |
| ! | ATTGTGGTGGGGTCGTTGTT+AGG | + | Chr3:87277634-87277653 | MsG0380016741.01.T01:CDS | 50.0% |
| ! | CTCGCAGCAGTTTTCATCGA+AGG | + | Chr3:87276905-87276924 | MsG0380016741.01.T01:CDS | 50.0% |
| !! | AATCAAGGTATCGGGCTCGT+TGG | + | Chr3:87277055-87277074 | MsG0380016741.01.T01:CDS | 50.0% |
| !! | ACCGTTGTTGGCTTCGATTC+CGG | + | Chr3:87277771-87277790 | MsG0380016741.01.T01:CDS | 50.0% |
| !! | ATCAAGGTATCGGGCTCGTT+GGG | + | Chr3:87277056-87277075 | MsG0380016741.01.T01:CDS | 50.0% |
| !! | GTAGGTGTTGAAGCGAGAGA+TGG | - | Chr3:87276414-87276433 | None:intergenic | 50.0% |
| AACACTCTGGTTGGGCCTTG+TGG | + | Chr3:87277237-87277256 | MsG0380016741.01.T01:CDS | 55.0% | |
| ACAAGGCCCAACCAGAGTGT+TGG | - | Chr3:87277238-87277257 | None:intergenic | 55.0% | |
| ACCGTGGCTTCTTCCCTCAT+TGG | + | Chr3:87276755-87276774 | MsG0380016741.01.T01:CDS | 55.0% | |
| AGACTTGATCGTCGCAACCG+TGG | + | Chr3:87276739-87276758 | MsG0380016741.01.T01:CDS | 55.0% | |
| AGGGGGAAGAACGGGGATAA+CGG | + | Chr3:87277705-87277724 | MsG0380016741.01.T01:CDS | 55.0% | |
| ATAAGCTCCTCCGCCGGTAT+CGG | + | Chr3:87277001-87277020 | MsG0380016741.01.T01:CDS | 55.0% | |
| ATCACGGGCTTCTTTAGCGC+CGG | + | Chr3:87277123-87277142 | MsG0380016741.01.T01:CDS | 55.0% | |
| CGAGGATGTAAGCCATGGTG+AGG | - | Chr3:87276526-87276545 | None:intergenic | 55.0% | |
| CTCATGAGCTGAATCACCGG+CGG | - | Chr3:87277386-87277405 | None:intergenic | 55.0% | |
| CTTCCAGGTGGAACGGTTTC+TGG | + | Chr3:87277178-87277197 | MsG0380016741.01.T01:CDS | 55.0% | |
| GAGAAAAAGCCCGATACCGG+CGG | - | Chr3:87277014-87277033 | None:intergenic | 55.0% | |
| GCCGGAATCGAAGCCAACAA+CGG | - | Chr3:87277775-87277794 | None:intergenic | 55.0% | |
| GGAAACAGAGCATGTTCCGC+CGG | - | Chr3:87276576-87276595 | None:intergenic | 55.0% | |
| GGAAAGCCCAACACTCTGGT+TGG | + | Chr3:87277228-87277247 | MsG0380016741.01.T01:CDS | 55.0% | |
| GGTGAGGAAAGTAGCCGTTC+CGG | - | Chr3:87276510-87276529 | None:intergenic | 55.0% | |
| GTGGACATTCTCGACACGAC+AGG | + | Chr3:87277517-87277536 | MsG0380016741.01.T01:CDS | 55.0% | |
| GTGGTTGCCCAAGCTCATCA+CGG | + | Chr3:87277107-87277126 | MsG0380016741.01.T01:CDS | 55.0% | |
| TACACCGTCGTGGGCTTTCA+CGG | + | Chr3:87276854-87276873 | MsG0380016741.01.T01:CDS | 55.0% | |
| TCAAGACAAGCGGCATAGCC+CGG | - | Chr3:87276707-87276726 | None:intergenic | 55.0% | |
| TCACCAGAAACCGTTCCACC+TGG | - | Chr3:87277184-87277203 | None:intergenic | 55.0% | |
| TGCTGCGAGTGCACTTTGGT+AGG | - | Chr3:87276894-87276913 | None:intergenic | 55.0% | |
| TGGTTGCCCAAGCTCATCAC+GGG | + | Chr3:87277108-87277127 | MsG0380016741.01.T01:CDS | 55.0% | |
| TGTTGGGCCGGTACAGTTTG+AGG | - | Chr3:87276636-87276655 | None:intergenic | 55.0% | |
| TTGAGCCCATACCTGGAGCA+AGG | - | Chr3:87276820-87276839 | None:intergenic | 55.0% | |
| ! | AACGGGGATAACGGCGTTGA+CGG | + | Chr3:87277714-87277733 | MsG0380016741.01.T01:CDS | 55.0% |
| ! | ACACTCTGGTTGGGCCTTGT+GGG | + | Chr3:87277238-87277257 | MsG0380016741.01.T01:CDS | 55.0% |
| ! | ACGGAGTTCGGTGGTGAAAG+TGG | - | Chr3:87276486-87276505 | None:intergenic | 55.0% |
| ! | AGATGGGCTTTGTGTGGGCT+TGG | - | Chr3:87276397-87276416 | None:intergenic | 55.0% |
| ! | AGCGAGAGATGGGCTTTGTG+TGG | - | Chr3:87276403-87276422 | None:intergenic | 55.0% |
| ! | ATGCCACGTCGATTGTGGTG+GGG | + | Chr3:87277623-87277642 | MsG0380016741.01.T01:CDS | 55.0% |
| ! | CAAGGCCCAACCAGAGTGTT+GGG | - | Chr3:87277237-87277256 | None:intergenic | 55.0% |
| ! | GATGCCACGTCGATTGTGGT+GGG | + | Chr3:87277622-87277641 | MsG0380016741.01.T01:CDS | 55.0% |
| ! | GCGAGAGATGGGCTTTGTGT+GGG | - | Chr3:87276402-87276421 | None:intergenic | 55.0% |
| ! | GTTGGCTTCGATTCCGGCTT+GGG | + | Chr3:87277777-87277796 | MsG0380016741.01.T01:CDS | 55.0% |
| !! | TCGATTCCGGCTTGGGCTAT+TGG | + | Chr3:87277784-87277803 | MsG0380016741.01.T01:CDS | 55.0% |
| !! | TGTTGGCTTCGATTCCGGCT+TGG | + | Chr3:87277776-87277795 | MsG0380016741.01.T01:CDS | 55.0% |
| AAAAAGCCCGATACCGGCGG+AGG | - | Chr3:87277011-87277030 | None:intergenic | 60.0% | |
| ATGAGCTGAATCACCGGCGG+CGG | - | Chr3:87277383-87277402 | None:intergenic | 60.0% | |
| CAAGACAAGCGGCATAGCCC+GGG | - | Chr3:87276706-87276725 | None:intergenic | 60.0% | |
| CGGCATAGCCCGGGTTAACA+GGG | - | Chr3:87276697-87276716 | None:intergenic | 60.0% | |
| CTCCCTTTAGGCCTTGCTCC+AGG | + | Chr3:87276806-87276825 | MsG0380016741.01.T01:CDS | 60.0% | |
| GACGGCGAGGATGTAAGCCA+TGG | - | Chr3:87276531-87276550 | None:intergenic | 60.0% | |
| GGAAAGTAGCCGTTCCGGCA+CGG | - | Chr3:87276505-87276524 | None:intergenic | 60.0% | |
| GGCATAGCCCGGGTTAACAG+GGG | - | Chr3:87276696-87276715 | None:intergenic | 60.0% | |
| GGTGGTCCAATAGCCCAAGC+CGG | - | Chr3:87277793-87277812 | None:intergenic | 60.0% | |
| TAAGCTCCTCCGCCGGTATC+GGG | + | Chr3:87277002-87277021 | MsG0380016741.01.T01:CDS | 60.0% | |
| TTCACCACCGAACTCCGTGC+CGG | + | Chr3:87276488-87276507 | MsG0380016741.01.T01:CDS | 60.0% | |
| ! | GGATGCCACGTCGATTGTGG+TGG | + | Chr3:87277621-87277640 | MsG0380016741.01.T01:CDS | 60.0% |
| ! | GGGCTTTGTGTGGGCTTGGT+GGG | - | Chr3:87276393-87276412 | None:intergenic | 60.0% |
| ! | GTCGGATGCCACGTCGATTG+TGG | + | Chr3:87277618-87277637 | MsG0380016741.01.T01:CDS | 60.0% |
| ! | TGGGCTTTGTGTGGGCTTGG+TGG | - | Chr3:87276394-87276413 | None:intergenic | 60.0% |
| !! | ATAACGGCGTTGACGGTGGC+GGG | + | Chr3:87277721-87277740 | MsG0380016741.01.T01:CDS | 60.0% |
| !! | GATAACGGCGTTGACGGTGG+CGG | + | Chr3:87277720-87277739 | MsG0380016741.01.T01:CDS | 60.0% |
| !! | TTTGTGTGGGCTTGGTGGGC+TGG | - | Chr3:87276389-87276408 | None:intergenic | 60.0% |
| AGCCGTTCCGGCACGGAGTT+CGG | - | Chr3:87276498-87276517 | None:intergenic | 65.0% | |
| CACCGAACTCCGTGCCGGAA+CGG | + | Chr3:87276493-87276512 | MsG0380016741.01.T01:CDS | 65.0% | |
| CGACCCCACCACAATCGACG+TGG | - | Chr3:87277629-87277648 | None:intergenic | 65.0% | |
| GAATCACCGGCGGCGGTGTT+AGG | - | Chr3:87277376-87277395 | None:intergenic | 65.0% | |
| GCGGCATAGCCCGGGTTAAC+AGG | - | Chr3:87276698-87276717 | None:intergenic | 65.0% | |
| GCGTTTCCTAACACCGCCGC+CGG | + | Chr3:87277367-87277386 | MsG0380016741.01.T01:CDS | 65.0% | |
| GCTGGAAGTGGGGGCCTTTG+AGG | - | Chr3:87276371-87276390 | None:intergenic | 65.0% | |
| GGAGCCGTGAAAGCCCACGA+CGG | - | Chr3:87276861-87276880 | None:intergenic | 65.0% | |
| GTCGTGGGCTTTCACGGCTC+CGG | + | Chr3:87276860-87276879 | MsG0380016741.01.T01:CDS | 65.0% | |
| !! | GAATGGAGGCGTTGACGGCG+AGG | - | Chr3:87276544-87276563 | None:intergenic | 65.0% |
| !! | GCTTGGTGGGCTGGAAGTGG+GGG | - | Chr3:87276380-87276399 | None:intergenic | 65.0% |
| !! | GGCTTGGTGGGCTGGAAGTG+GGG | - | Chr3:87276381-87276400 | None:intergenic | 65.0% |
| !! | GGGCTTGGTGGGCTGGAAGT+GGG | - | Chr3:87276382-87276401 | None:intergenic | 65.0% |
| !! | GGGGATAACGGCGTTGACGG+TGG | + | Chr3:87277717-87277736 | MsG0380016741.01.T01:CDS | 65.0% |
| !! | TGGGCTTGGTGGGCTGGAAG+TGG | - | Chr3:87276383-87276402 | None:intergenic | 65.0% |
| CGTTCCGGCACGGAGTTCGG+TGG | - | Chr3:87276495-87276514 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 87276347 | 87278155 | 87276347 | ID=MsG0380016741.01;Name=MsG0380016741.01 |
| Chr3 | mRNA | 87276347 | 87278155 | 87276347 | ID=MsG0380016741.01.T01;Parent=MsG0380016741.01;Name=MsG0380016741.01.T01;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|602 |
| Chr3 | exon | 87276347 | 87278155 | 87276347 | ID=MsG0380016741.01.T01:exon:22092;Parent=MsG0380016741.01.T01 |
| Chr3 | CDS | 87276347 | 87278155 | 87276347 | ID=MsG0380016741.01.T01:cds;Parent=MsG0380016741.01.T01 |
| Gene Sequence |
| Protein sequence |
