AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016982.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016982.01.T01 MTR_2g022600 96.309 298 11 0 24 321 24 321 0.0 589
MsG0380016982.01.T01 MTR_3g098750 91.060 302 12 4 21 321 142 429 0.0 542
MsG0380016982.01.T01 MTR_0103s0010 93.671 79 5 0 243 321 1 79 9.51e-47 155
MsG0380016982.01.T01 MTR_6g009130 93.671 79 5 0 243 321 1 79 1.59e-46 156
MsG0380016982.01.T01 MTR_7g080410 30.738 244 142 8 22 245 27 263 3.08e-16 78.6
MsG0380016982.01.T01 MTR_7g080410 30.738 244 142 8 22 245 27 263 4.84e-16 77.8
MsG0380016982.01.T01 MTR_8g096620 29.730 222 133 7 33 247 45 250 1.27e-15 77.0
MsG0380016982.01.T01 MTR_1196s0010 31.884 207 126 6 22 221 262 460 1.61e-13 71.6
MsG0380016982.01.T01 MTR_3g085740 32.787 183 112 5 38 214 80 257 2.52e-12 67.0
MsG0380016982.01.T01 MTR_8g096580 28.070 228 143 6 9 226 17 233 7.35e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016982.01.T01 AT3G06060 67.296 318 99 1 8 320 7 324 7.82e-155 437
MsG0380016982.01.T01 AT3G06060 67.296 318 99 1 8 320 24 341 1.07e-154 437
MsG0380016982.01.T01 AT5G19200 64.052 306 110 0 16 321 18 323 4.12e-144 410
MsG0380016982.01.T01 AT3G47350 28.814 236 145 7 33 259 44 265 1.30e-17 82.4
MsG0380016982.01.T01 AT3G47360 28.464 267 157 9 14 259 13 266 2.52e-16 78.6
MsG0380016982.01.T01 AT3G47350 28.326 233 146 7 33 259 44 261 4.51e-16 78.2
MsG0380016982.01.T01 AT5G50690 27.869 244 149 7 33 264 45 273 5.71e-16 77.4
MsG0380016982.01.T01 AT5G50590 27.869 244 149 7 33 264 45 273 5.71e-16 77.4
MsG0380016982.01.T01 AT5G50600 29.688 192 119 5 38 224 50 230 4.64e-15 75.5
MsG0380016982.01.T01 AT5G50700 29.688 192 119 5 38 224 50 230 4.64e-15 75.5
MsG0380016982.01.T01 AT5G50690 29.268 205 129 5 33 232 45 238 1.44e-14 72.8
MsG0380016982.01.T01 AT5G50590 29.268 205 129 5 33 232 45 238 1.44e-14 72.8
MsG0380016982.01.T01 AT2G29360 28.571 217 145 4 39 250 22 233 2.59e-14 72.4
MsG0380016982.01.T01 AT5G65205 32.967 182 108 5 38 214 11 183 6.45e-14 71.6
MsG0380016982.01.T01 AT3G03330 29.583 240 134 8 33 245 41 272 5.33e-13 69.3

Find 94 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTATTCAGCCAGTAAATT+TGG 0.172419 3:-90289355 MsG0380016982.01.T01:CDS
AGAAGAGGCGGCAATGATTT+TGG 0.231745 3:+90288759 None:intergenic
TGCGTTGGAATTGGAGAAAA+TGG 0.239743 3:-90291929 MsG0380016982.01.T01:CDS
GGAGTTTAGGTGGGAATTTA+TGG 0.244735 3:-90289385 MsG0380016982.01.T01:intron
CCCTCAGAGGTCATTCTTAA+TGG 0.249957 3:-90288617 MsG0380016982.01.T01:CDS
ACCACGGAGGCCAAATTTAC+TGG 0.299819 3:+90289345 None:intergenic
GTTGGTGATTGGGATGTTGA+TGG 0.324335 3:+90292209 None:intergenic
TACGATTGATGTTAATTTGA+TGG 0.335633 3:-90291887 MsG0380016982.01.T01:CDS
AAAATCATTGCCGCCTCTTC+TGG 0.340277 3:-90288757 MsG0380016982.01.T01:CDS
GTTCTTAGCTTCTTCGAGTT+TGG 0.354464 3:+90292083 None:intergenic
GCGTTATCCCTAGCAACTTC+AGG 0.363331 3:-90288646 MsG0380016982.01.T01:CDS
GCCCACCGTGCCGCCGCCGA+TGG 0.381158 3:-90292138 MsG0380016982.01.T01:CDS
GAACGAGGAAGTAGAGGAGG+GGG 0.385095 3:+90292241 None:intergenic
ATTGGGATGTTGATGGGGCG+GGG 0.385930 3:+90292216 None:intergenic
CACTATGTTTCCAGTGGAAC+TGG 0.390366 3:-90288552 MsG0380016982.01.T01:CDS
CTTTGCCTCATATGAAGAAT+AGG 0.397692 3:-90291840 MsG0380016982.01.T01:CDS
TGTTTCATCACAAGCTGGTC+AGG 0.403214 3:-90291788 MsG0380016982.01.T01:intron
TTTGTTGAGGTTATTGCTGC+TGG 0.403834 3:-90288592 MsG0380016982.01.T01:CDS
GATTGGGATGTTGATGGGGC+GGG 0.405508 3:+90292215 None:intergenic
GCCATCGGCGGCGGCACGGT+GGG 0.411059 3:+90292137 None:intergenic
TTGGTGATTGGGATGTTGAT+GGG 0.412954 3:+90292210 None:intergenic
TTGGGATGTTGATGGGGCGG+GGG 0.416631 3:+90292217 None:intergenic
TCTTTCCTATTCTTCATATG+AGG 0.422042 3:+90291835 None:intergenic
CGGCACGGTGGGCGAAGGCG+AGG 0.432340 3:+90292148 None:intergenic
GTGCGCCATCGGCGGCGGCA+CGG 0.432781 3:+90292133 None:intergenic
GGGAGGGAGGAGGATGAAGA+AGG 0.435215 3:+90292272 None:intergenic
GCATTGCAACAAGAGGTTAT+AGG 0.440395 3:-90289313 MsG0380016982.01.T01:CDS
AAGACGTGACGGTTGGTGAT+TGG 0.443292 3:+90292198 None:intergenic
TGATTGGGATGTTGATGGGG+CGG 0.445565 3:+90292214 None:intergenic
GATGTGTTGTTGTTGAATCA+TGG 0.446056 3:-90291961 MsG0380016982.01.T01:CDS
GCCAATGCCGCTTGAGCCGC+CGG 0.446682 3:+90292170 None:intergenic
ATTCAACAACAACACATCAA+TGG 0.449590 3:+90291966 None:intergenic
TATCATTTCTTGCAATTTGG+AGG 0.451120 3:-90288674 MsG0380016982.01.T01:CDS
ACCGGCGGCTCAAGCGGCAT+TGG 0.454196 3:-90292171 MsG0380016982.01.T01:CDS
TTCAACAACAACACATCAAT+GGG 0.463160 3:+90291967 None:intergenic
GGCGAACGAGGAAGTAGAGG+AGG 0.463478 3:+90292238 None:intergenic
CGCCATCGGCGGCGGCACGG+TGG 0.473237 3:+90292136 None:intergenic
AGACGTGACGGTTGGTGATT+GGG 0.475289 3:+90292199 None:intergenic
GACACGTGCGCCATCGGCGG+CGG 0.475509 3:+90292128 None:intergenic
CGAACGAGGAAGTAGAGGAG+GGG 0.483350 3:+90292240 None:intergenic
TTATTACCTTCCACAAGTCC+AGG 0.487399 3:+90289244 None:intergenic
ACGATTGATGTTAATTTGAT+GGG 0.487967 3:-90291886 MsG0380016982.01.T01:CDS
GGCGGCGGCACGGTGGGCGA+AGG 0.489938 3:+90292143 None:intergenic
AAGAAAGTGGCTGATGAAGC+TGG 0.490908 3:-90291991 MsG0380016982.01.T01:CDS
CCTCCAGACACGGATACTCC+TGG 0.495714 3:-90289262 MsG0380016982.01.T01:CDS
GGGATAAACCTGAAGTTGCT+AGG 0.498430 3:+90288638 None:intergenic
CACGGATACTCCTGGACTTG+TGG 0.498701 3:-90289254 MsG0380016982.01.T01:CDS
TGTTTCCAGTGGAACTGGTA+TGG 0.499008 3:-90288547 MsG0380016982.01.T01:CDS
AGCTTCTTCGAGTTTGGTGA+GGG 0.500666 3:+90292089 None:intergenic
AACCGTCACGTCTTCATCAC+CGG 0.500852 3:-90292189 MsG0380016982.01.T01:CDS
AGTCCAGGAGTATCCGTGTC+TGG 0.502012 3:+90289259 None:intergenic
TTCATCACCGGCGGCTCAAG+CGG 0.502972 3:-90292177 MsG0380016982.01.T01:CDS
ATTCTTAATGGCATTTGTTG+AGG 0.509829 3:-90288605 MsG0380016982.01.T01:CDS
ACGCCACCGGCGTTGAAGTA+GGG 0.517118 3:-90292050 MsG0380016982.01.T01:CDS
GATGGAGACACGTGCGCCAT+CGG 0.519050 3:+90292122 None:intergenic
ATCATTTCTTGCAATTTGGA+GGG 0.526476 3:-90288673 MsG0380016982.01.T01:CDS
GAAACAAAAGCAATAGAAGT+AGG 0.528412 3:+90291805 None:intergenic
CCATTAAGAATGACCTCTGA+GGG 0.529640 3:+90288617 None:intergenic
TAGAGAAGTGGCACAAGCAA+AGG 0.532078 3:-90288519 MsG0380016982.01.T01:CDS
TACTTCCATACCAGTTCCAC+TGG 0.538704 3:+90288542 None:intergenic
CACGCCACCGGCGTTGAAGT+AGG 0.540975 3:-90292051 MsG0380016982.01.T01:CDS
AGCAGAAGCATTGCAACAAG+AGG 0.543956 3:-90289320 MsG0380016982.01.T01:CDS
TAGCTTCTTCGAGTTTGGTG+AGG 0.548548 3:+90292088 None:intergenic
GCCAGTAAATTTGGCCTCCG+TGG 0.553386 3:-90289346 MsG0380016982.01.T01:CDS
AGCTTTCTGAGCAACTTCAT+CGG 0.559805 3:+90288723 None:intergenic
TGGTGATTGGGATGTTGATG+GGG 0.560212 3:+90292211 None:intergenic
GGAGACACGTGCGCCATCGG+CGG 0.575948 3:+90292125 None:intergenic
AACTCTGTCAAACACGCCAC+CGG 0.576757 3:-90292063 MsG0380016982.01.T01:CDS
GGATAAACCTGAAGTTGCTA+GGG 0.579338 3:+90288639 None:intergenic
GGCTTTCATAAAACCAGAAG+AGG 0.580601 3:+90288744 None:intergenic
AAATATCCCTACTTCAACGC+CGG 0.589585 3:+90292044 None:intergenic
GGTGAGGGATCGTGCCATGA+TGG 0.590438 3:+90292104 None:intergenic
TGGCGCACGTGTCTCCATCA+TGG 0.594989 3:-90292118 MsG0380016982.01.T01:CDS
CAGGAGTATCCGTGTCTGGA+GGG 0.595120 3:+90289263 None:intergenic
GCGAACGAGGAAGTAGAGGA+GGG 0.595936 3:+90292239 None:intergenic
GATACTCCTGGACTTGTGGA+AGG 0.602564 3:-90289250 MsG0380016982.01.T01:intron
GAAGCTTCGTCAATGGCGGA+AGG 0.606175 3:-90292303 None:intergenic
CCAGGAGTATCCGTGTCTGG+AGG 0.613762 3:+90289262 None:intergenic
TTGCAGCACTATGTTTCCAG+TGG 0.620013 3:-90288558 MsG0380016982.01.T01:CDS
CTATGATGCGGTGAAGAAAG+TGG 0.625265 3:-90292004 MsG0380016982.01.T01:CDS
GGTATGGAAGTATAGAGAAG+TGG 0.632472 3:-90288531 MsG0380016982.01.T01:CDS
TATCCCTACTTCAACGCCGG+TGG 0.634282 3:+90292047 None:intergenic
TCTGATATTCCCTCCAGACA+CGG 0.634324 3:-90289272 MsG0380016982.01.T01:CDS
CGCCGGTGATGAAGACGTGA+CGG 0.634988 3:+90292187 None:intergenic
TTTCATAAAACCAGAAGAGG+CGG 0.645943 3:+90288747 None:intergenic
TGAAGTAGGGATATTTGATG+CGG 0.647074 3:-90292037 MsG0380016982.01.T01:CDS
GCCATTAAGAATGACCTCTG+AGG 0.666181 3:+90288616 None:intergenic
CTTCAGGTTTATCCCCTCAG+AGG 0.666800 3:-90288630 MsG0380016982.01.T01:CDS
GGTGATGAAGACGTGACGGT+TGG 0.685255 3:+90292191 None:intergenic
GCAATGCTTCTGCTAAACCA+CGG 0.698466 3:+90289329 None:intergenic
CGTCACGTCTTCATCACCGG+CGG 0.707292 3:-90292186 MsG0380016982.01.T01:CDS
CATTAAGAATGACCTCTGAG+GGG 0.759100 3:+90288618 None:intergenic
ATGCTTCTGCTAAACCACGG+AGG 0.773999 3:+90289332 None:intergenic
GGATGTAAGAGACTATGATG+CGG 0.841105 3:-90292016 MsG0380016982.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAAAGAAAAAGAGAA+GGG + Chr3:90291258-90291277 None:intergenic 15.0%
!! TATCAAAAGTAATACTAATA+TGG + Chr3:90291592-90291611 None:intergenic 15.0%
!! TTATCAAATTATAGATAGTT+TGG + Chr3:90290076-90290095 None:intergenic 15.0%
!! TTCAATATGAACTTAAAATA+TGG - Chr3:90290658-90290677 MsG0380016982.01.T01:intron 15.0%
!!! TAAATTAGCATAATTTTAGA+AGG + Chr3:90289837-90289856 None:intergenic 15.0%
!! AAAAAAAAACATAACTCCAT+TGG + Chr3:90289915-90289934 None:intergenic 20.0%
!! AAAAAAAACATAACTCCATT+GGG + Chr3:90289914-90289933 None:intergenic 20.0%
!! AATTAAGCTGTTTATCTAAA+TGG + Chr3:90289063-90289082 None:intergenic 20.0%
!! AGATTTAAAGATTAATGAGT+TGG - Chr3:90289451-90289470 MsG0380016982.01.T01:intron 20.0%
!! CCATAAAATATAAAACTCAA+CGG - Chr3:90290347-90290366 MsG0380016982.01.T01:intron 20.0%
!! CCATAATAAACATAGTTTAT+GGG + Chr3:90289040-90289059 None:intergenic 20.0%
!! GAAATTAAAAGAAAAAGAGA+AGG + Chr3:90291259-90291278 None:intergenic 20.0%
!! TAAGTTCATATTGAAAAGAA+CGG + Chr3:90290653-90290672 None:intergenic 20.0%
!! TAGTAGTAAAACAAAACATA+AGG + Chr3:90289706-90289725 None:intergenic 20.0%
!! TATATAGTATATTGTCATGT+AGG - Chr3:90291847-90291866 MsG0380016982.01.T01:CDS 20.0%
!! TGGTTTATGATAAAACATTA+TGG - Chr3:90289483-90289502 MsG0380016982.01.T01:intron 20.0%
!!! TGGAGTTATGTTTTTTTTTT+TGG - Chr3:90289916-90289935 MsG0380016982.01.T01:intron 20.0%
!!! TTACTTTTGATAATTGATCT+AGG - Chr3:90291600-90291619 MsG0380016982.01.T01:intron 20.0%
!!! TTCATTTTACATTGAAAATG+AGG - Chr3:90291623-90291642 MsG0380016982.01.T01:intron 20.0%
!!! TTTTATCATTTCTTGCAATT+TGG - Chr3:90292106-90292125 MsG0380016982.01.T01:CDS 20.0%
!!! TTTTTTTTTTGGAAAACACA+GGG - Chr3:90289927-90289946 MsG0380016982.01.T01:intron 20.0%
!!! TTTTTTTTTTTGGAAAACAC+AGG - Chr3:90289926-90289945 MsG0380016982.01.T01:intron 20.0%
! AAAAAAACATAACTCCATTG+GGG + Chr3:90289913-90289932 None:intergenic 25.0%
! AAGTTAATAGATCATTTCTC+AGG - Chr3:90290144-90290163 MsG0380016982.01.T01:intron 25.0%
! CCCATAAACTATGTTTATTA+TGG - Chr3:90289037-90289056 MsG0380016982.01.T01:intron 25.0%
! GAGAAGTTATGAAAATAAGT+TGG - Chr3:90289577-90289596 MsG0380016982.01.T01:intron 25.0%
! GAGTTTCTATTATAAAGAGA+GGG + Chr3:90291102-90291121 None:intergenic 25.0%
! GCCATAATAAACATAGTTTA+TGG + Chr3:90289041-90289060 None:intergenic 25.0%
! TAGTTTATGAAGATGTCATA+AGG - Chr3:90289603-90289622 MsG0380016982.01.T01:intron 25.0%
!! ACGATTGATGTTAATTTGAT+GGG - Chr3:90288897-90288916 MsG0380016982.01.T01:intron 25.0%
!! ATTGTTTTCATAAGCTATCT+TGG - Chr3:90289555-90289574 MsG0380016982.01.T01:intron 25.0%
!! TAATGAGTTGGATTCAAATA+TGG - Chr3:90289463-90289482 MsG0380016982.01.T01:intron 25.0%
!! TACGATTGATGTTAATTTGA+TGG - Chr3:90288896-90288915 MsG0380016982.01.T01:intron 25.0%
!!! ATTTTTTTAATGCGGAGTTT+AGG - Chr3:90291385-90291404 MsG0380016982.01.T01:intron 25.0%
!!! CCGTTGAGTTTTATATTTTA+TGG + Chr3:90290350-90290369 None:intergenic 25.0%
AAGTGTAAGTACAAACTGAA+AGG - Chr3:90291965-90291984 MsG0380016982.01.T01:CDS 30.0%
ACTTGTGGAAGGTAATAAAT+TGG - Chr3:90291544-90291563 MsG0380016982.01.T01:intron 30.0%
AGCTTATAGACAAACACTTA+TGG + Chr3:90289097-90289116 None:intergenic 30.0%
ATATTGATCATGCAATGTAG+GGG + Chr3:90290284-90290303 None:intergenic 30.0%
ATCATTTCTTGCAATTTGGA+GGG - Chr3:90292110-90292129 MsG0380016982.01.T01:CDS 30.0%
ATGACAGAGAAAATGAGAAT+CGG + Chr3:90290108-90290127 None:intergenic 30.0%
ATTATTGAACACAGTTCATG+TGG + Chr3:90290515-90290534 None:intergenic 30.0%
ATTCAACAACAACACATCAA+TGG + Chr3:90288820-90288839 None:intergenic 30.0%
ATTCATTCAAGAAAGTTGTC+AGG + Chr3:90291061-90291080 None:intergenic 30.0%
CATATTATGAGTGTGTCTTT+GGG - Chr3:90291824-90291843 MsG0380016982.01.T01:CDS 30.0%
CATATTGATCATGCAATGTA+GGG + Chr3:90290285-90290304 None:intergenic 30.0%
CGAGTTTCTATTATAAAGAG+AGG + Chr3:90291103-90291122 None:intergenic 30.0%
CTATTAACTTCTTCCAAACA+TGG + Chr3:90290134-90290153 None:intergenic 30.0%
CTGACAAAATCAGAACATTT+AGG + Chr3:90291889-90291908 None:intergenic 30.0%
GAAACAAAAGCAATAGAAGT+AGG + Chr3:90288981-90289000 None:intergenic 30.0%
GATTAGAAATGACACCATTA+GGG - Chr3:90289234-90289253 MsG0380016982.01.T01:intron 30.0%
GTGAGAGAATAAAGGTTATT+AGG + Chr3:90291145-90291164 None:intergenic 30.0%
TAATTATGCCACTCTAGATT+GGG - Chr3:90289855-90289874 MsG0380016982.01.T01:intron 30.0%
TACATAAATTTCCCAAGAGA+TGG + Chr3:90291929-90291948 None:intergenic 30.0%
TATCATTTCTTGCAATTTGG+AGG - Chr3:90292109-90292128 MsG0380016982.01.T01:CDS 30.0%
TCATATTGATCATGCAATGT+AGG + Chr3:90290286-90290305 None:intergenic 30.0%
TCTTTCCTATTCTTCATATG+AGG + Chr3:90288951-90288970 None:intergenic 30.0%
TGAACTTAAAATATGGCTCT+AGG - Chr3:90290665-90290684 MsG0380016982.01.T01:intron 30.0%
TGATAGAAACCAGAAGATAA+AGG - Chr3:90290898-90290917 MsG0380016982.01.T01:intron 30.0%
TGATTAGAAATGACACCATT+AGG - Chr3:90289233-90289252 MsG0380016982.01.T01:intron 30.0%
TGTAATTTGATCCACTTAGT+GGG - Chr3:90289506-90289525 MsG0380016982.01.T01:intron 30.0%
TGTAGAAAGTGAGAGAATAA+AGG + Chr3:90291153-90291172 None:intergenic 30.0%
TTAATTATGCCACTCTAGAT+TGG - Chr3:90289854-90289873 MsG0380016982.01.T01:intron 30.0%
TTACTACTAACTAGTTCATG+TGG - Chr3:90289717-90289736 MsG0380016982.01.T01:intron 30.0%
TTATTGAACACAGTTCATGT+GGG + Chr3:90290514-90290533 None:intergenic 30.0%
TTCAACAACAACACATCAAT+GGG + Chr3:90288819-90288838 None:intergenic 30.0%
TTCTATTATAAAGAGAGGGA+AGG + Chr3:90291098-90291117 None:intergenic 30.0%
TTTCAAATATCCACTTCCTT+GGG - Chr3:90290576-90290595 MsG0380016982.01.T01:intron 30.0%
TTTCAGTTTGTACTTACACT+TGG + Chr3:90291966-90291985 None:intergenic 30.0%
! ATGATTCAGATGATACGTTT+TGG + Chr3:90291311-90291330 None:intergenic 30.0%
! ATTCACTTGAATGAGGATTT+TGG + Chr3:90290847-90290866 None:intergenic 30.0%
! ATTCTTAATGGCATTTGTTG+AGG - Chr3:90292178-90292197 MsG0380016982.01.T01:CDS 30.0%
! ATTTTGTGCAGAAACCAAAT+GGG + Chr3:90290190-90290209 None:intergenic 30.0%
! GATTTTCATTCACTTGAATG+AGG + Chr3:90290854-90290873 None:intergenic 30.0%
! TATAGGGAAGGTATAGAAAA+TGG + Chr3:90289978-90289997 None:intergenic 30.0%
! TATTTGAAATCCACTTGGTT+TGG - Chr3:90290481-90290500 MsG0380016982.01.T01:intron 30.0%
!! CACAAAACTCTAAAATAGGA+AGG + Chr3:90290788-90290807 None:intergenic 30.0%
!!! AATTTTGAGAGCACTTATAG+TGG - Chr3:90290033-90290052 MsG0380016982.01.T01:intron 30.0%
!!! CTATTTTAGAGTTTTGTGGA+GGG - Chr3:90290790-90290809 MsG0380016982.01.T01:intron 30.0%
!!! CTTCCTATTTTAGAGTTTTG+TGG - Chr3:90290786-90290805 MsG0380016982.01.T01:intron 30.0%
!!! TATTTTAGAGTTTTGTGGAG+GGG - Chr3:90290791-90290810 MsG0380016982.01.T01:intron 30.0%
!!! TGTGATGTGATTTTTAGTGT+GGG - Chr3:90289752-90289771 MsG0380016982.01.T01:intron 30.0%
!!! TTGTGATGTGATTTTTAGTG+TGG - Chr3:90289751-90289770 MsG0380016982.01.T01:intron 30.0%
AAAAGAGAAGGGAAGATGAT+AGG + Chr3:90291247-90291266 None:intergenic 35.0%
AAACAATGTCGTGGCATAAT+TGG + Chr3:90289810-90289829 None:intergenic 35.0%
AAACTGCACTAGTGTGAATT+GGG - Chr3:90291182-90291201 MsG0380016982.01.T01:intron 35.0%
AAAGAGAAGGGAAGATGATA+GGG + Chr3:90291246-90291265 None:intergenic 35.0%
AAATTTAGCCCAATCTAGAG+TGG + Chr3:90289866-90289885 None:intergenic 35.0%
AACAAAACATAAGGCCAGTT+TGG + Chr3:90289697-90289716 None:intergenic 35.0%
AGAAACTCGACTAGATTTCA+GGG - Chr3:90291114-90291133 MsG0380016982.01.T01:intron 35.0%
ATAGTCAGATCAAAAGAGGT+AGG - Chr3:90289410-90289429 MsG0380016982.01.T01:intron 35.0%
CAGTCTGACAAAACTTATGT+CGG - Chr3:90289648-90289667 MsG0380016982.01.T01:intron 35.0%
CATATAACTCTGGTGTACTT+TGG + Chr3:90290986-90291005 None:intergenic 35.0%
CCAAAGACACACTCATAATA+TGG + Chr3:90291826-90291845 None:intergenic 35.0%
CCAGAAGATAAAGGTAAGAA+CGG - Chr3:90290907-90290926 MsG0380016982.01.T01:intron 35.0%
CCATATTATGAGTGTGTCTT+TGG - Chr3:90291823-90291842 MsG0380016982.01.T01:CDS 35.0%
CTATGATGTCTTAAACCCTT+GGG - Chr3:90290692-90290711 MsG0380016982.01.T01:intron 35.0%
CTTTGCCTCATATGAAGAAT+AGG - Chr3:90288943-90288962 MsG0380016982.01.T01:intron 35.0%
GAAAATGAGGTAAGTAACCT+TGG - Chr3:90291636-90291655 MsG0380016982.01.T01:intron 35.0%
GAAGACGACAATGGATAAAA+TGG + Chr3:90290878-90290897 None:intergenic 35.0%
GAAGAGATAATCTAGTGATG+TGG - Chr3:90291352-90291371 MsG0380016982.01.T01:intron 35.0%
GAGAAGACATGTAGATTCTA+TGG - Chr3:90289363-90289382 MsG0380016982.01.T01:CDS 35.0%
GAGCTTAAAGCTCTTACAAT+AGG - Chr3:90290952-90290971 MsG0380016982.01.T01:intron 35.0%
GCTTAACAACAACCTCAATA+TGG - Chr3:90291658-90291677 MsG0380016982.01.T01:intron 35.0%
GCTTATTCAGCCAGTAAATT+TGG - Chr3:90291428-90291447 MsG0380016982.01.T01:intron 35.0%
GGCAATTGCAACTATTGAAA+TGG - Chr3:90290391-90290410 MsG0380016982.01.T01:intron 35.0%
GTGTAATTTGATCCACTTAG+TGG - Chr3:90289505-90289524 MsG0380016982.01.T01:intron 35.0%
GTGTCATATTACTAATGAGC+TGG - Chr3:90290212-90290231 MsG0380016982.01.T01:intron 35.0%
GTTTCAAATATCCACTTCCT+TGG - Chr3:90290575-90290594 MsG0380016982.01.T01:intron 35.0%
TAACTAGTTCATGTGGTTGT+TGG - Chr3:90289724-90289743 MsG0380016982.01.T01:intron 35.0%
TACCTTCCCTATATATCGAT+TGG - Chr3:90289985-90290004 MsG0380016982.01.T01:intron 35.0%
TAGAAACTCGACTAGATTTC+AGG - Chr3:90291113-90291132 MsG0380016982.01.T01:intron 35.0%
TAGCAGCCAATCGATATATA+GGG + Chr3:90289994-90290013 None:intergenic 35.0%
TAGTCAGATCAAAAGAGGTA+GGG - Chr3:90289411-90289430 MsG0380016982.01.T01:intron 35.0%
TATGATGTCTTAAACCCTTG+GGG - Chr3:90290693-90290712 MsG0380016982.01.T01:intron 35.0%
TCAATATGGATGTGGAATCA+GGG - Chr3:90291672-90291691 MsG0380016982.01.T01:intron 35.0%
TCTATGATGTCTTAAACCCT+TGG - Chr3:90290691-90290710 MsG0380016982.01.T01:intron 35.0%
TCTCTGTCATTAACCATGTT+TGG - Chr3:90290118-90290137 MsG0380016982.01.T01:intron 35.0%
TGAAGTAGGGATATTTGATG+CGG - Chr3:90288746-90288765 MsG0380016982.01.T01:CDS 35.0%
TTAGCAGCCAATCGATATAT+AGG + Chr3:90289995-90290014 None:intergenic 35.0%
TTCAAATATCCACTTCCTTG+GGG - Chr3:90290577-90290596 MsG0380016982.01.T01:intron 35.0%
TTTCATAAAACCAGAAGAGG+CGG + Chr3:90292039-90292058 None:intergenic 35.0%
TTTCTATCAGAAGACGACAA+TGG + Chr3:90290887-90290906 None:intergenic 35.0%
TTTGGAGAAATTGATCTCCA+TGG - Chr3:90290720-90290739 MsG0380016982.01.T01:intron 35.0%
! ACCAAGTGGATTTCAAATAG+TGG + Chr3:90290480-90290499 None:intergenic 35.0%
! AGTGTTTTATGCGTTGGAAT+TGG - Chr3:90288845-90288864 MsG0380016982.01.T01:intron 35.0%
! ATTATGCCACGACATTGTTT+TGG - Chr3:90289810-90289829 MsG0380016982.01.T01:intron 35.0%
! ATTGAAAAGAACGGTGTTGA+TGG + Chr3:90290644-90290663 None:intergenic 35.0%
! CATCTGAATCATTAGCCTAT+AGG - Chr3:90291319-90291338 MsG0380016982.01.T01:intron 35.0%
! CATTTTGTGCAGAAACCAAA+TGG + Chr3:90290191-90290210 None:intergenic 35.0%
! CCAAGTGGATTTCAAATAGT+GGG + Chr3:90290479-90290498 None:intergenic 35.0%
! GATGTGTTGTTGTTGAATCA+TGG - Chr3:90288822-90288841 MsG0380016982.01.T01:intron 35.0%
! TAGAGAGCATGATAGAAAGA+TGG - Chr3:90290536-90290555 MsG0380016982.01.T01:intron 35.0%
! TATTTGTTAGAAAGCCCCAA+TGG - Chr3:90289896-90289915 MsG0380016982.01.T01:intron 35.0%
! TTATGCCACGACATTGTTTT+GGG - Chr3:90289811-90289830 MsG0380016982.01.T01:intron 35.0%
! TTGATGGTTACCAACATAAC+AGG + Chr3:90290628-90290647 None:intergenic 35.0%
! TTTTAATGCGGAGTTTAGGT+GGG - Chr3:90291389-90291408 MsG0380016982.01.T01:intron 35.0%
! TTTTGGATGTTGGAATGCAA+AGG + Chr3:90291294-90291313 None:intergenic 35.0%
! TTTTTAATGCGGAGTTTAGG+TGG - Chr3:90291388-90291407 MsG0380016982.01.T01:intron 35.0%
!! AAGTTGATTTGACACCCATT+TGG - Chr3:90290173-90290192 MsG0380016982.01.T01:intron 35.0%
!! AGATGATACGTTTTGGATGT+TGG + Chr3:90291304-90291323 None:intergenic 35.0%
!! CCTCCACAAAACTCTAAAAT+AGG + Chr3:90290792-90290811 None:intergenic 35.0%
!! TAAGTTTTGTCAGACTGTTC+CGG + Chr3:90289645-90289664 None:intergenic 35.0%
!! TCAAATAGGTTGATCCAAAC+TGG - Chr3:90289680-90289699 MsG0380016982.01.T01:intron 35.0%
!! TTAGAGTTGACTCGATAAAG+TGG - Chr3:90290248-90290267 MsG0380016982.01.T01:intron 35.0%
!!! ATTTTAGAGTTTTGTGGAGG+GGG - Chr3:90290792-90290811 MsG0380016982.01.T01:intron 35.0%
!!! CCTATTTTAGAGTTTTGTGG+AGG - Chr3:90290789-90290808 MsG0380016982.01.T01:intron 35.0%
AAAGTTGTCAGGAGTCAGTT+AGG + Chr3:90291050-90291069 None:intergenic 40.0%
AAATATCCCTACTTCAACGC+CGG + Chr3:90288742-90288761 None:intergenic 40.0%
AGAAATGACACCATTAGGGA+GGG - Chr3:90289238-90289257 MsG0380016982.01.T01:intron 40.0%
AGACTGTTCCGGATAACTTA+CGG + Chr3:90289634-90289653 None:intergenic 40.0%
AGATGGCACAAAATGGTACT+TGG + Chr3:90291912-90291931 None:intergenic 40.0%
AGCCAATCGATATATAGGGA+AGG + Chr3:90289990-90290009 None:intergenic 40.0%
AGCTTTCTGAGCAACTTCAT+CGG + Chr3:90292063-90292082 None:intergenic 40.0%
AGGTGTTTCCGTAAGTTATC+CGG - Chr3:90289623-90289642 MsG0380016982.01.T01:intron 40.0%
AGTCAGATCAAAAGAGGTAG+GGG - Chr3:90289412-90289431 MsG0380016982.01.T01:intron 40.0%
CAACAACCTCAATATGGATG+TGG - Chr3:90291664-90291683 MsG0380016982.01.T01:intron 40.0%
CATTAAGAATGACCTCTGAG+GGG + Chr3:90292168-90292187 None:intergenic 40.0%
CCATTAAGAATGACCTCTGA+GGG + Chr3:90292169-90292188 None:intergenic 40.0%
CCGTTCTTACCTTTATCTTC+TGG + Chr3:90290910-90290929 None:intergenic 40.0%
CTCAATATGGATGTGGAATC+AGG - Chr3:90291671-90291690 MsG0380016982.01.T01:intron 40.0%
CTGACAAAACTTATGTCGGT+AGG - Chr3:90289652-90289671 MsG0380016982.01.T01:intron 40.0%
CTGATTCCACATCCATATTG+AGG + Chr3:90291673-90291692 None:intergenic 40.0%
GAAACTGCACTAGTGTGAAT+TGG - Chr3:90291181-90291200 MsG0380016982.01.T01:intron 40.0%
GACATGTAGATTCTATGGTC+AGG - Chr3:90289368-90289387 MsG0380016982.01.T01:CDS 40.0%
GAGGATAGTCAGATCAAAAG+AGG - Chr3:90289406-90289425 MsG0380016982.01.T01:intron 40.0%
GCATTGCAACAAGAGGTTAT+AGG - Chr3:90291470-90291489 MsG0380016982.01.T01:intron 40.0%
GGAGTTTAGGTGGGAATTTA+TGG - Chr3:90291398-90291417 MsG0380016982.01.T01:intron 40.0%
GGATAAACCTGAAGTTGCTA+GGG + Chr3:90292147-90292166 None:intergenic 40.0%
GGATGTAAGAGACTATGATG+CGG - Chr3:90288767-90288786 MsG0380016982.01.T01:CDS 40.0%
GGCTTTCATAAAACCAGAAG+AGG + Chr3:90292042-90292061 None:intergenic 40.0%
GGTAGGAGTTCATATAACTC+TGG + Chr3:90290996-90291015 None:intergenic 40.0%
TAGAAATGACACCATTAGGG+AGG - Chr3:90289237-90289256 MsG0380016982.01.T01:intron 40.0%
TCAGTTAGGAAAGTTCTCTC+TGG + Chr3:90291036-90291055 None:intergenic 40.0%
TGCGTTGGAATTGGAGAAAA+TGG - Chr3:90288854-90288873 MsG0380016982.01.T01:intron 40.0%
TGGAATGCAAAGGAAGTGAA+GGG + Chr3:90291284-90291303 None:intergenic 40.0%
TTATTACCTTCCACAAGTCC+AGG + Chr3:90291542-90291561 None:intergenic 40.0%
TTGATCCACTTAGTGGGATA+AGG - Chr3:90289512-90289531 MsG0380016982.01.T01:intron 40.0%
TTGGAATGCAAAGGAAGTGA+AGG + Chr3:90291285-90291304 None:intergenic 40.0%
TTTGTTGAGGTTATTGCTGC+TGG - Chr3:90292191-90292210 MsG0380016982.01.T01:CDS 40.0%
! AATGTTTTACCCCAAGGAAG+TGG + Chr3:90290589-90290608 None:intergenic 40.0%
! ACACTAGTGCAGTTTCTAGA+AGG + Chr3:90291177-90291196 None:intergenic 40.0%
! ACCATTTTGTGCCATCTCTT+GGG - Chr3:90291915-90291934 MsG0380016982.01.T01:CDS 40.0%
! ACTCTGGTGTACTTTGGTTT+AGG + Chr3:90290980-90290999 None:intergenic 40.0%
! AGGAAAGTTCTCTCTGGTTT+AGG + Chr3:90291030-90291049 None:intergenic 40.0%
! CAACATCTCAACGGCAATTT+TGG - Chr3:90290439-90290458 MsG0380016982.01.T01:intron 40.0%
! CACTTGAATGAGGATTTTGG+AGG + Chr3:90290844-90290863 None:intergenic 40.0%
! CCCACTATTTGAAATCCACT+TGG - Chr3:90290476-90290495 MsG0380016982.01.T01:intron 40.0%
! GATATTTGAAACAACGACGC+TGG + Chr3:90290567-90290586 None:intergenic 40.0%
! GGTATGGAAGTATAGAGAAG+TGG - Chr3:90292252-90292271 MsG0380016982.01.T01:CDS 40.0%
! GTTCTTAGCTTCTTCGAGTT+TGG + Chr3:90288703-90288722 None:intergenic 40.0%
! GTTGCTCAGAAAGCTTTTGA+TGG - Chr3:90292068-90292087 MsG0380016982.01.T01:CDS 40.0%
! TACCATTTTGTGCCATCTCT+TGG - Chr3:90291914-90291933 MsG0380016982.01.T01:CDS 40.0%
! TTGAGGTTGTTGTTAAGCCA+AGG + Chr3:90291656-90291675 None:intergenic 40.0%
! TTGGTGATTGGGATGTTGAT+GGG + Chr3:90288576-90288595 None:intergenic 40.0%
!! AGTTGACTCGATAAAGTGGA+TGG - Chr3:90290252-90290271 MsG0380016982.01.T01:intron 40.0%
!! CGGAGTACTATTTCTGCAAA+TGG - Chr3:90290927-90290946 MsG0380016982.01.T01:intron 40.0%
!! GCTTTTGTTTCATCACAAGC+TGG - Chr3:90288990-90289009 MsG0380016982.01.T01:intron 40.0%
!! TCAACGGCAATTTTGGTATG+TGG - Chr3:90290446-90290465 MsG0380016982.01.T01:intron 40.0%
!! TCATGGAGTGTTTTATGCGT+TGG - Chr3:90288839-90288858 MsG0380016982.01.T01:intron 40.0%
AAAATCATTGCCGCCTCTTC+TGG - Chr3:90292026-90292045 MsG0380016982.01.T01:CDS 45.0%
AACATAACAGGCAACACCAC+TGG + Chr3:90290616-90290635 None:intergenic 45.0%
AAGAAAGTGGCTGATGAAGC+TGG - Chr3:90288792-90288811 MsG0380016982.01.T01:intron 45.0%
AAGCTGGTCAGGTATGGAAT+TGG - Chr3:90289006-90289025 MsG0380016982.01.T01:intron 45.0%
AAGTAAGCCTAGCCGAGATT+AGG - Chr3:90289173-90289192 MsG0380016982.01.T01:intron 45.0%
AATGCAAAGGAAGTGAAGGG+AGG + Chr3:90291281-90291300 None:intergenic 45.0%
AGGTAGGGGGAGAATCTATT+AGG - Chr3:90289426-90289445 MsG0380016982.01.T01:intron 45.0%
ATTTCTCCAAAACGTCCCCA+AGG + Chr3:90290711-90290730 None:intergenic 45.0%
CACGCTCTACAACATCTCAA+CGG - Chr3:90290430-90290449 MsG0380016982.01.T01:intron 45.0%
CACTATGTTTCCAGTGGAAC+TGG - Chr3:90292231-90292250 MsG0380016982.01.T01:CDS 45.0%
CAGGAGAGTAGATGAGATTG+AGG - Chr3:90289387-90289406 MsG0380016982.01.T01:intron 45.0%
CATTCAAGCACTTCCATAGC+AGG + Chr3:90291698-90291717 None:intergenic 45.0%
CCAACGCAACATCCTAATCT+CGG + Chr3:90289188-90289207 None:intergenic 45.0%
CCCTCAGAGGTCATTCTTAA+TGG - Chr3:90292166-90292185 MsG0380016982.01.T01:CDS 45.0%
CGGTTTCATATTTGCCCTTG+CGG - Chr3:90290367-90290386 MsG0380016982.01.T01:intron 45.0%
CTATGATGCGGTGAAGAAAG+TGG - Chr3:90288779-90288798 MsG0380016982.01.T01:CDS 45.0%
CTTTATCCTCCATGCACACA+TGG + Chr3:90290748-90290767 None:intergenic 45.0%
GATGTGTGGTAAGACTAGAC+GGG - Chr3:90289207-90289226 MsG0380016982.01.T01:intron 45.0%
GCAATGCTTCTGCTAAACCA+CGG + Chr3:90291457-90291476 None:intergenic 45.0%
GCCATTAAGAATGACCTCTG+AGG + Chr3:90292170-90292189 None:intergenic 45.0%
GGATGTGTGGTAAGACTAGA+CGG - Chr3:90289206-90289225 MsG0380016982.01.T01:intron 45.0%
GGGATAAACCTGAAGTTGCT+AGG + Chr3:90292148-90292167 None:intergenic 45.0%
GGGTAAAACATTGCTTCCAG+TGG - Chr3:90290597-90290616 MsG0380016982.01.T01:intron 45.0%
GTCAGATCAAAAGAGGTAGG+GGG - Chr3:90289413-90289432 MsG0380016982.01.T01:intron 45.0%
GTCGGTAGGTAAGCTCAAAT+AGG - Chr3:90289666-90289685 MsG0380016982.01.T01:intron 45.0%
GTGAATTGGGCCCAATGATT+GGG - Chr3:90291195-90291214 MsG0380016982.01.T01:intron 45.0%
TACTTCCATACCAGTTCCAC+TGG + Chr3:90292244-90292263 None:intergenic 45.0%
TAGAGAAGTGGCACAAGCAA+AGG - Chr3:90292264-90292283 MsG0380016982.01.T01:CDS 45.0%
TATGAACTCCTACCAGAGCT+AGG - Chr3:90291002-90291021 MsG0380016982.01.T01:intron 45.0%
TCCCAAGAGATGGCACAAAA+TGG + Chr3:90291919-90291938 None:intergenic 45.0%
TCTGATATTCCCTCCAGACA+CGG - Chr3:90291511-90291530 MsG0380016982.01.T01:intron 45.0%
TCTTCGATAGCACTGCCTAT+AGG + Chr3:90291337-90291356 None:intergenic 45.0%
TGAGATGTTGTAGAGCGTGT+TGG + Chr3:90290429-90290448 None:intergenic 45.0%
TGGTGATTGGGATGTTGATG+GGG + Chr3:90288575-90288594 None:intergenic 45.0%
TGTGAATTGGGCCCAATGAT+TGG - Chr3:90291194-90291213 MsG0380016982.01.T01:intron 45.0%
TGTTTCATCACAAGCTGGTC+AGG - Chr3:90288995-90289014 MsG0380016982.01.T01:intron 45.0%
TGTTTCCAGTGGAACTGGTA+TGG - Chr3:90292236-90292255 MsG0380016982.01.T01:CDS 45.0%
TTGCAGCACTATGTTTCCAG+TGG - Chr3:90292225-90292244 MsG0380016982.01.T01:CDS 45.0%
TTTCATATTTGCCCTTGCGG+TGG - Chr3:90290370-90290389 MsG0380016982.01.T01:intron 45.0%
TTTCTCCAAAACGTCCCCAA+GGG + Chr3:90290710-90290729 None:intergenic 45.0%
! AGAAGAGGCGGCAATGATTT+TGG + Chr3:90292027-90292046 None:intergenic 45.0%
! AGCTTCTTCGAGTTTGGTGA+GGG + Chr3:90288697-90288716 None:intergenic 45.0%
! GGAAGCAATGTTTTACCCCA+AGG + Chr3:90290595-90290614 None:intergenic 45.0%
! TAGCTTCTTCGAGTTTGGTG+AGG + Chr3:90288698-90288717 None:intergenic 45.0%
! TCAAGCCTTATCCCACTAAG+TGG + Chr3:90289520-90289539 None:intergenic 45.0%
! TTAAACCCTTGGGGACGTTT+TGG - Chr3:90290702-90290721 MsG0380016982.01.T01:intron 45.0%
!! AGCAGAAGCATTGCAACAAG+AGG - Chr3:90291463-90291482 MsG0380016982.01.T01:intron 45.0%
!! AGTGGTGTTGCCTGTTATGT+TGG - Chr3:90290615-90290634 MsG0380016982.01.T01:intron 45.0%
!! GCAATGATTTTGGTGAGCTC+TGG + Chr3:90292017-90292036 None:intergenic 45.0%
!! GCTTTTGATGGCATAAGACG+TGG - Chr3:90292080-90292099 MsG0380016982.01.T01:CDS 45.0%
!! GTTGGTGATTGGGATGTTGA+TGG + Chr3:90288577-90288596 None:intergenic 45.0%
!!! TTTTATTTATTTTTTTAATG+CGG - Chr3:90291377-90291396 MsG0380016982.01.T01:intron 5.0%
AACCGTCACGTCTTCATCAC+CGG - Chr3:90288594-90288613 MsG0380016982.01.T01:CDS 50.0%
AACTCTGTCAAACACGCCAC+CGG - Chr3:90288720-90288739 MsG0380016982.01.T01:CDS 50.0%
AATGACACCATTAGGGAGGG+AGG - Chr3:90289241-90289260 MsG0380016982.01.T01:intron 50.0%
ACCACGGAGGCCAAATTTAC+TGG + Chr3:90291441-90291460 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - Chr3:90289291-90289310 MsG0380016982.01.T01:CDS 50.0%
AGGATGTTGCGTTGGATGTG+TGG - Chr3:90289193-90289212 MsG0380016982.01.T01:intron 50.0%
AGTTGCAATTGCCACCGCAA+GGG + Chr3:90290384-90290403 None:intergenic 50.0%
ATGACACCATTAGGGAGGGA+GGG - Chr3:90289242-90289261 MsG0380016982.01.T01:intron 50.0%
ATGCTTCTGCTAAACCACGG+AGG + Chr3:90291454-90291473 None:intergenic 50.0%
CATCACAAGCTGGTCAGGTA+TGG - Chr3:90289000-90289019 MsG0380016982.01.T01:intron 50.0%
CCGAGATTAGGATGTTGCGT+TGG - Chr3:90289185-90289204 MsG0380016982.01.T01:intron 50.0%
CGTGTGAGAGCCCAATCATT+GGG + Chr3:90291208-90291227 None:intergenic 50.0%
GAAGGCCCAAAACAATGTCG+TGG + Chr3:90289819-90289838 None:intergenic 50.0%
GATACTCCTGGACTTGTGGA+AGG - Chr3:90291533-90291552 MsG0380016982.01.T01:intron 50.0%
GCAACATCCTAATCTCGGCT+AGG + Chr3:90289183-90289202 None:intergenic 50.0%
GCGTTATCCCTAGCAACTTC+AGG - Chr3:90292137-90292156 MsG0380016982.01.T01:CDS 50.0%
TAGTTGCAATTGCCACCGCA+AGG + Chr3:90290385-90290404 None:intergenic 50.0%
TCGTGTGAGAGCCCAATCAT+TGG + Chr3:90291209-90291228 None:intergenic 50.0%
! CTTCAGGTTTATCCCCTCAG+AGG - Chr3:90292153-90292172 MsG0380016982.01.T01:CDS 50.0%
! TGATTGGGATGTTGATGGGG+CGG + Chr3:90288572-90288591 None:intergenic 50.0%
!! AAGACGTGACGGTTGGTGAT+TGG + Chr3:90288588-90288607 None:intergenic 50.0%
!! AGACGTGACGGTTGGTGATT+GGG + Chr3:90288587-90288606 None:intergenic 50.0%
!! TTTAGGAGCCTAGCTCTGGT+AGG + Chr3:90291013-90291032 None:intergenic 50.0%
ATGGAGCCATGTGTGCATGG+AGG - Chr3:90290739-90290758 MsG0380016982.01.T01:intron 55.0%
CACGGATACTCCTGGACTTG+TGG - Chr3:90291529-90291548 MsG0380016982.01.T01:intron 55.0%
CGAACGAGGAAGTAGAGGAG+GGG + Chr3:90288546-90288565 None:intergenic 55.0%
CTGGTTTAGGAGCCTAGCTC+TGG + Chr3:90291017-90291036 None:intergenic 55.0%
GAACGAGGAAGTAGAGGAGG+GGG + Chr3:90288545-90288564 None:intergenic 55.0%
GATTGGGCTCTCACACGAAC+TGG - Chr3:90291211-90291230 MsG0380016982.01.T01:intron 55.0%
GCCAGTAAATTTGGCCTCCG+TGG - Chr3:90291437-90291456 MsG0380016982.01.T01:intron 55.0%
GCGAACGAGGAAGTAGAGGA+GGG + Chr3:90288547-90288566 None:intergenic 55.0%
GGGTCTGTCACCAAACCAAG+TGG + Chr3:90290494-90290513 None:intergenic 55.0%
GGTGATGAAGACGTGACGGT+TGG + Chr3:90288595-90288614 None:intergenic 55.0%
GTGGAGGGGGAAGCAAATCA+GGG - Chr3:90290805-90290824 MsG0380016982.01.T01:intron 55.0%
TATCCCTACTTCAACGCCGG+TGG + Chr3:90288739-90288758 None:intergenic 55.0%
TCCATGCACACATGGCTCCA+TGG + Chr3:90290740-90290759 None:intergenic 55.0%
TCCATGGAGCCATGTGTGCA+TGG - Chr3:90290736-90290755 MsG0380016982.01.T01:intron 55.0%
TGTGGAATCAGGGCCTGCTA+TGG - Chr3:90291682-90291701 MsG0380016982.01.T01:intron 55.0%
TGTGGAGGGGGAAGCAAATC+AGG - Chr3:90290804-90290823 MsG0380016982.01.T01:intron 55.0%
! AGGGAAGATGATAGGGCACC+AGG + Chr3:90291239-90291258 None:intergenic 55.0%
! ATTGGGATGTTGATGGGGCG+GGG + Chr3:90288570-90288589 None:intergenic 55.0%
! GATTGGGATGTTGATGGGGC+GGG + Chr3:90288571-90288590 None:intergenic 55.0%
! GGGAAGATGATAGGGCACCA+GGG + Chr3:90291238-90291257 None:intergenic 55.0%
!! AGTCCAGGAGTATCCGTGTC+TGG + Chr3:90291527-90291546 None:intergenic 55.0%
!! CAGGAGTATCCGTGTCTGGA+GGG + Chr3:90291523-90291542 None:intergenic 55.0%
AAGTAGAGGAGGGGGAGGAG+GGG + Chr3:90288537-90288556 None:intergenic 60.0%
ACACCATTAGGGAGGGAGGG+AGG - Chr3:90289245-90289264 MsG0380016982.01.T01:intron 60.0%
ATTAGGGAGGGAGGGAGGGA+GGG - Chr3:90289250-90289269 MsG0380016982.01.T01:intron 60.0%
CACCATTAGGGAGGGAGGGA+GGG - Chr3:90289246-90289265 MsG0380016982.01.T01:intron 60.0%
CCTCCAGACACGGATACTCC+TGG - Chr3:90291521-90291540 MsG0380016982.01.T01:intron 60.0%
CGCCGGTGATGAAGACGTGA+CGG + Chr3:90288599-90288618 None:intergenic 60.0%
CGTCACGTCTTCATCACCGG+CGG - Chr3:90288597-90288616 MsG0380016982.01.T01:CDS 60.0%
CTCTCACACGAACTGGACCC+TGG - Chr3:90291218-90291237 MsG0380016982.01.T01:intron 60.0%
GAAGTAGAGGAGGGGGAGGA+GGG + Chr3:90288538-90288557 None:intergenic 60.0%
GAGAGAGAGAGAGAGAGGCG+AGG - Chr3:90289320-90289339 MsG0380016982.01.T01:CDS 60.0%
GAGAGAGAGAGGCGAGGCTT+TGG - Chr3:90289326-90289345 MsG0380016982.01.T01:CDS 60.0%
GATGGAGACACGTGCGCCAT+CGG + Chr3:90288664-90288683 None:intergenic 60.0%
GGCGAACGAGGAAGTAGAGG+AGG + Chr3:90288548-90288567 None:intergenic 60.0%
GGGAGGGAGGAGGATGAAGA+AGG + Chr3:90288514-90288533 None:intergenic 60.0%
GGTGAGGGATCGTGCCATGA+TGG + Chr3:90288682-90288701 None:intergenic 60.0%
TGGCGCACGTGTCTCCATCA+TGG - Chr3:90288665-90288684 MsG0380016982.01.T01:CDS 60.0%
TTCATCACCGGCGGCTCAAG+CGG - Chr3:90288606-90288625 MsG0380016982.01.T01:CDS 60.0%
! ACGCCACCGGCGTTGAAGTA+GGG - Chr3:90288733-90288752 MsG0380016982.01.T01:CDS 60.0%
! TTGGGATGTTGATGGGGCGG+GGG + Chr3:90288569-90288588 None:intergenic 60.0%
!! CCAGGAGTATCCGTGTCTGG+AGG + Chr3:90291524-90291543 None:intergenic 60.0%
AGTAGAGGAGGGGGAGGAGG+GGG + Chr3:90288536-90288555 None:intergenic 65.0%
CATTAGGGAGGGAGGGAGGG+AGG - Chr3:90289249-90289268 MsG0380016982.01.T01:intron 65.0%
CGAGGAAGTAGAGGAGGGGG+AGG + Chr3:90288542-90288561 None:intergenic 65.0%
CTCCCTCCCTCCCTCCCTAA+TGG + Chr3:90289251-90289270 None:intergenic 65.0%
GAGGGAGGGAGGGAGAGAGA+GGG - Chr3:90289268-90289287 MsG0380016982.01.T01:CDS 65.0%
GGAAGTAGAGGAGGGGGAGG+AGG + Chr3:90288539-90288558 None:intergenic 65.0%
GGGGGCGAACGAGGAAGTAG+AGG + Chr3:90288551-90288570 None:intergenic 65.0%
! CACGCCACCGGCGTTGAAGT+AGG - Chr3:90288732-90288751 MsG0380016982.01.T01:CDS 65.0%
ACCGGCGGCTCAAGCGGCAT+TGG - Chr3:90288612-90288631 MsG0380016982.01.T01:CDS 70.0%
GGAGACACGTGCGCCATCGG+CGG + Chr3:90288661-90288680 None:intergenic 70.0%
GGAGGGAGGGAGGGAGAGAG+AGG - Chr3:90289267-90289286 MsG0380016982.01.T01:CDS 70.0%
GTAGAGGAGGGGGAGGAGGG+GGG + Chr3:90288535-90288554 None:intergenic 70.0%
TAGAGGAGGGGGAGGAGGGG+GGG + Chr3:90288534-90288553 None:intergenic 70.0%
! GCCAATGCCGCTTGAGCCGC+CGG + Chr3:90288616-90288635 None:intergenic 70.0%
AGGGAGGGAGGGAGGGAGGG+AGG - Chr3:90289253-90289272 MsG0380016982.01.T01:CDS 75.0%
GACACGTGCGCCATCGGCGG+CGG + Chr3:90288658-90288677 None:intergenic 75.0%
GGGAGGGAGGGAGGGAGGGA+GGG - Chr3:90289254-90289273 MsG0380016982.01.T01:CDS 75.0%
TGATGGGGCGGGGGCGAACG+AGG + Chr3:90288560-90288579 None:intergenic 75.0%
! AGGAGGGGGAGGAGGGGGGG+AGG + Chr3:90288531-90288550 None:intergenic 80.0%
! CGGCACGGTGGGCGAAGGCG+AGG + Chr3:90288638-90288657 None:intergenic 80.0%
! GCCATCGGCGGCGGCACGGT+GGG + Chr3:90288649-90288668 None:intergenic 80.0%
! GGAGGAGGGGGGGAGGGAGG+AGG + Chr3:90288524-90288543 None:intergenic 80.0%
! GGAGGGGGAGGAGGGGGGGA+GGG + Chr3:90288530-90288549 None:intergenic 80.0%
! GTGCGCCATCGGCGGCGGCA+CGG + Chr3:90288653-90288672 None:intergenic 80.0%
! CGCCATCGGCGGCGGCACGG+TGG + Chr3:90288650-90288669 None:intergenic 85.0%
! GCCCACCGTGCCGCCGCCGA+TGG - Chr3:90288645-90288664 MsG0380016982.01.T01:CDS 85.0%
! GGCGGCGGCACGGTGGGCGA+AGG + Chr3:90288643-90288662 None:intergenic 85.0%
! GGGGGAGGAGGGGGGGAGGG+AGG + Chr3:90288527-90288546 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr3 gene 90288492 90292313 90288492 ID=MsG0380016982.01;Name=MsG0380016982.01
Chr3 mRNA 90288492 90292313 90288492 ID=MsG0380016982.01.T01;Parent=MsG0380016982.01;Name=MsG0380016982.01.T01;_AED=0.42;_eAED=0.45;_QI=0|0.5|0|1|1|1|3|0|328
Chr3 exon 90291789 90292313 90291789 ID=MsG0380016982.01.T01:exon:5780;Parent=MsG0380016982.01.T01
Chr3 exon 90289251 90289398 90289251 ID=MsG0380016982.01.T01:exon:5779;Parent=MsG0380016982.01.T01
Chr3 exon 90288492 90288805 90288492 ID=MsG0380016982.01.T01:exon:5778;Parent=MsG0380016982.01.T01
Chr3 CDS 90291789 90292313 90291789 ID=MsG0380016982.01.T01:cds;Parent=MsG0380016982.01.T01
Chr3 CDS 90289251 90289398 90289251 ID=MsG0380016982.01.T01:cds;Parent=MsG0380016982.01.T01
Chr3 CDS 90288492 90288805 90288492 ID=MsG0380016982.01.T01:cds;Parent=MsG0380016982.01.T01
Gene Sequence

>MsG0380016982.01.T01

ATGGCGGAAGGATTCTTCTCCTTCTTCATCCTCCTCCCTCCCCCCCTCCTCCCCCTCCTCTACTTCCTCGTTCGCCCCCGCCCCATCAACATCCCAATCACCAACCGTCACGTCTTCATCACCGGCGGCTCAAGCGGCATTGGCCTCGCCTTCGCCCACCGTGCCGCCGCCGATGGCGCACGTGTCTCCATCATGGCACGATCCCTCACCAAACTCGAAGAAGCTAAGAACTCTGTCAAACACGCCACCGGCGTTGAAGTAGGGATATTTGATGCGGATGTAAGAGACTATGATGCGGTGAAGAAAGTGGCTGATGAAGCTGGACCCATTGATGTGTTGTTGTTGAATCATGGAGTGTTTTATGCGTTGGAATTGGAGAAAATGGAATTGAGTGATGTCAAGTTTACGATTGATGTTAATTTGATGGGTTGTTTGAATATGATTAAAGCTGCTTTGCCTCATATGAAGAATAGGAAAGATACTTTACCTACTTCTATTGCTTTTGTTTCATCACAAGCTGGTCAGGTGGGAATTTATGGTTATGTAGCTTATTCAGCCAGTAAATTTGGCCTCCGTGGTTTAGCAGAAGCATTGCAACAAGAGGTTATAGGAGATAATATTCATGTCTCTCTGATATTCCCTCCAGACACGGATACTCCTGGACTTGTGGAAGAAAATAAGAGAAAACCAGAGCTCACCAAAATCATTGCCGCCTCTTCTGGTTTTATGAAAGCCGATGAAGTTGCTCAGAAAGCTTTTGATGGCATAAGACGTGGCAGTTTTATCATTTCTTGCAATTTGGAGGGTATTGCGTTATCCCTAGCAACTTCAGGTTTATCCCCTCAGAGGTCATTCTTAATGGCATTTGTTGAGGTTATTGCTGCTGGAATAATGCGTATTGCAGCACTATGTTTCCAGTGGAACTGGTATGGAAGTATAGAGAAGTGGCACAAGCAAAGGAAGTGTAAGTGTCTGTTTACTTTTTAA
Protein sequence

>MsG0380016982.01.T01

MAEGFFSFFILLPPPLLPLLYFLVRPRPINIPITNRHVFITGGSSGIGLAFAHRAAADGARVSIMARSLTKLEEAKNSVKHATGVEVGIFDADVRDYDAVKKVADEAGPIDVLLLNHGVFYALELEKMELSDVKFTIDVNLMGCLNMIKAALPHMKNRKDTLPTSIAFVSSQAGQVGIYGYVAYSASKFGLRGLAEALQQEVIGDNIHVSLIFPPDTDTPGLVEENKRKPELTKIIAASSGFMKADEVAQKAFDGIRRGSFIISCNLEGIALSLATSGLSPQRSFLMAFVEVIAAGIMRIAALCFQWNWYGSIEKWHKQRKCKCLFTF*