AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017132.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017132.01.T01 MTR_3g101590 81.699 836 55 6 1 741 1 833 0.0 1326
MsG0380017132.01.T01 MTR_3g101590 84.953 751 69 7 1 714 1 744 0.0 1234
MsG0380017132.01.T01 MTR_1g019740 57.258 248 33 2 561 735 128 375 2.50e-84 272
MsG0380017132.01.T01 MTR_1g019740 57.258 248 33 2 561 735 268 515 1.24e-82 272
MsG0380017132.01.T01 MTR_1g019740 44.255 235 110 8 1 223 1 226 1.40e-42 162
MsG0380017132.01.T01 MTR_7g100370 53.333 285 54 4 523 735 585 862 9.29e-81 276
MsG0380017132.01.T01 MTR_7g100370 59.375 128 42 3 1 127 1 119 4.36e-40 159
MsG0380017132.01.T01 MTR_1g067380 51.079 278 64 2 530 735 643 920 1.13e-78 271
MsG0380017132.01.T01 MTR_1g067380 67.000 100 33 0 1 100 1 100 6.03e-40 158
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017132.01.T01 AT5G42870 56.977 258 39 2 554 739 672 929 2.24e-85 290
MsG0380017132.01.T01 AT5G42870 48.319 238 87 7 1 215 1 225 9.43e-51 191
MsG0380017132.01.T01 AT5G42870 55.814 258 37 3 554 739 672 924 1.06e-80 277
MsG0380017132.01.T01 AT5G42870 48.319 238 87 7 1 215 1 225 8.40e-51 191
MsG0380017132.01.T01 AT5G42870 64.593 209 35 1 554 723 672 880 6.72e-80 274
MsG0380017132.01.T01 AT5G42870 48.319 238 87 7 1 215 1 225 8.73e-51 191
MsG0380017132.01.T01 AT3G09560 50.741 270 56 3 539 735 634 899 2.91e-76 264
MsG0380017132.01.T01 AT3G09560 75.000 92 23 0 1 92 1 92 9.56e-41 161
MsG0380017132.01.T01 AT3G09560 50.741 270 56 3 539 735 634 899 2.91e-76 264
MsG0380017132.01.T01 AT3G09560 75.000 92 23 0 1 92 1 92 9.56e-41 161
MsG0380017132.01.T01 AT3G09560 50.741 270 56 3 539 735 634 899 2.91e-76 264
MsG0380017132.01.T01 AT3G09560 75.000 92 23 0 1 92 1 92 9.56e-41 161
MsG0380017132.01.T01 AT3G09560 50.741 270 56 3 539 735 634 899 2.91e-76 264
MsG0380017132.01.T01 AT3G09560 75.000 92 23 0 1 92 1 92 9.56e-41 161

Find 200 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTGTTAGTTTGAGATTT+TGG 0.141100 3:-92460515 None:intergenic
CCTTGACTGCGGAGAATAAA+TGG 0.155534 3:-92462996 None:intergenic
TCGAAAATCATATCATAATT+TGG 0.156724 3:+92465590 MsG0380017132.01.T01:three_prime_UTR
CGAATACTTGGTCTTATGTT+TGG 0.225017 3:+92459171 MsG0380017132.01.T01:CDS
TCTTCTTTATCTATATATTC+AGG 0.244090 3:-92460812 None:intergenic
AAAATCTCAAACTAACAATT+TGG 0.253796 3:+92460517 MsG0380017132.01.T01:CDS
AATAACCTTGGTCCTGGATA+TGG 0.267858 3:+92465293 MsG0380017132.01.T01:three_prime_UTR
TTTCGTCAAGGTCACTAAAA+AGG 0.268524 3:-92460754 None:intergenic
TTATTACCAGAAGAAATATT+TGG 0.281868 3:-92460947 None:intergenic
CCCGCAGCATCCTCATTTCT+AGG 0.284851 3:-92460896 None:intergenic
GAGTCCAGTGATTGACTTAA+AGG 0.287905 3:-92460995 None:intergenic
CTCAAATATATCTGTGGAAA+TGG 0.299611 3:+92462204 MsG0380017132.01.T01:CDS
ATGCAAGCGGTGGGGAGATT+AGG 0.300952 3:+92458763 MsG0380017132.01.T01:CDS
CTCATTTCTAGGGATAACTA+TGG 0.305863 3:-92460885 None:intergenic
ATCCAGGACCAAGGTTATTC+AGG 0.310812 3:-92465289 None:intergenic
TGTCATGGTGGTGCATATTT+TGG 0.311441 3:+92465476 MsG0380017132.01.T01:three_prime_UTR
AATCCGTTCTATGCTGGTTT+TGG 0.317235 3:+92464670 MsG0380017132.01.T01:CDS
AAGAAGACATGTAAACTTCT+TGG 0.317624 3:-92465734 None:intergenic
TGAAAGAGCCTGATGACTTT+TGG 0.319334 3:+92465266 MsG0380017132.01.T01:exon
CTTGGGATTCCATATGGCTT+TGG 0.321940 3:-92465716 None:intergenic
GAATACTTGGTCTTATGTTT+GGG 0.323830 3:+92459172 MsG0380017132.01.T01:CDS
TCCTTGCCAAATATTTCTTC+TGG 0.329362 3:+92460941 MsG0380017132.01.T01:CDS
TTCAGAATCTTGATAAGCTT+TGG 0.339252 3:-92461101 None:intergenic
TCACTGGACTCGGCATTTCC+TGG 0.342801 3:+92461007 MsG0380017132.01.T01:CDS
GTCATCCTGGCTGTTGTAAC+TGG 0.344362 3:-92460594 None:intergenic
CCATATGGCTTTGGTGGTCA+TGG 0.352455 3:-92465707 None:intergenic
TGCGTAATATTTCTTTATGC+TGG 0.355384 3:-92465863 None:intergenic
CCAACGGGATTCCAACCTTA+AGG 0.364577 3:-92464720 None:intergenic
TGCAAGCGGTGGGGAGATTA+GGG 0.368694 3:+92458764 MsG0380017132.01.T01:CDS
TGTTATTATCACATAATTCT+CGG 0.384405 3:-92460616 None:intergenic
TGCCTTTGGTTGGTGTTGAC+TGG 0.386172 3:+92462956 MsG0380017132.01.T01:CDS
TAGGAATTGTCGTGTAATAT+AGG 0.389831 3:-92463423 None:intergenic
GGTCTTTGAGTTTCATTCTC+AGG 0.392056 3:+92460427 MsG0380017132.01.T01:CDS
TGATGAAATCAGTTACCTTA+AGG 0.397156 3:+92464705 MsG0380017132.01.T01:CDS
CAAGGCGTATACACCGTTTC+CGG 0.397395 3:+92458799 MsG0380017132.01.T01:CDS
TCTTGGCCAGTTCATGCCTT+TGG 0.397799 3:+92462942 MsG0380017132.01.T01:CDS
TCTAAGCGTTCGCGAATACT+TGG 0.403981 3:+92459159 MsG0380017132.01.T01:CDS
TCCGGTCCCTTTCATCCATT+CGG 0.407707 3:+92458817 MsG0380017132.01.T01:CDS
TCCGAGGATGGGAAGATTGT+AGG 0.408097 3:+92459126 MsG0380017132.01.T01:CDS
GGAAGCATTGGTAACACAAT+AGG 0.408443 3:-92460573 None:intergenic
GATAATATTTCTTATGAGAA+TGG 0.410235 3:+92460833 MsG0380017132.01.T01:CDS
CAAACTAACAATTTGGATAT+AGG 0.410575 3:+92460524 MsG0380017132.01.T01:CDS
AAACTTCTTGGGATTCCATA+TGG 0.413481 3:-92465722 None:intergenic
TCCTACAGGTCAGATGTTCT+TGG 0.416257 3:+92462925 MsG0380017132.01.T01:intron
TATCTTGCTCATGGGGAAAC+TGG 0.417204 3:+92459465 MsG0380017132.01.T01:CDS
AGAAGACATGTAAACTTCTT+GGG 0.420245 3:-92465733 None:intergenic
ATTCCTACTGAATCTTAAAC+AGG 0.423793 3:+92463439 MsG0380017132.01.T01:CDS
CTTGCATTCACTCGTATCTC+AGG 0.425477 3:+92459512 MsG0380017132.01.T01:CDS
GGGATTCCATATGGCTTTGG+TGG 0.425560 3:-92465713 None:intergenic
ATATTGATCATCAATCTTTG+AGG 0.435136 3:+92459082 MsG0380017132.01.T01:CDS
CCTTCAGGGTACGGAAACTA+AGG 0.436318 3:+92460376 MsG0380017132.01.T01:intron
TGCAGCTCTTAAAAGAATAT+AGG 0.437487 3:+92465330 MsG0380017132.01.T01:three_prime_UTR
CTTCTTTATCTATATATTCA+GGG 0.438364 3:-92460811 None:intergenic
CTCATCTCTTAGCATCAAAC+AGG 0.454238 3:-92465654 None:intergenic
CATATGGCTTTGGTGGTCAT+GGG 0.455131 3:-92465706 None:intergenic
ATTTCTCATTTGCAGGAGAA+TGG 0.456087 3:+92463359 MsG0380017132.01.T01:intron
AAAGGAGTGGGACTTAACTA+TGG 0.458332 3:-92465774 None:intergenic
GATTGCAATCCGTTCTATGC+TGG 0.458935 3:+92464664 MsG0380017132.01.T01:CDS
AGAAGAGGTTTCTGTGGTAG+AGG 0.460405 3:+92459374 MsG0380017132.01.T01:CDS
TCACCATGGTACGTTCGGTT+TGG 0.460726 3:+92458892 MsG0380017132.01.T01:CDS
TCATATCATAATTTGGTGGA+TGG 0.461185 3:+92465597 MsG0380017132.01.T01:three_prime_UTR
AATCATCACCATGGTACGTT+CGG 0.462335 3:+92458887 MsG0380017132.01.T01:CDS
CGAATTTGTTGGATATTAAG+TGG 0.463895 3:+92459259 MsG0380017132.01.T01:CDS
CACATAATTCTCGGTCATCC+TGG 0.465222 3:-92460607 None:intergenic
TGGATGAAAGGGACCGGAAA+CGG 0.465333 3:-92458812 None:intergenic
TCAAATATCAAATGCAGAAG+GGG 0.466952 3:-92465246 None:intergenic
CACCAACCAAAGGCATGAAC+TGG 0.468960 3:-92462948 None:intergenic
GGCCTGAATAACCTTGGTCC+TGG 0.471719 3:+92465287 MsG0380017132.01.T01:three_prime_UTR
TGAGATTGCCGCGAATTTGT+TGG 0.477774 3:+92459248 MsG0380017132.01.T01:CDS
AGCATAGAACGGATTGCAAT+CGG 0.479526 3:-92464662 None:intergenic
GGGGAAGTTGGGCAGCATAC+AGG 0.479739 3:+92460917 MsG0380017132.01.T01:CDS
GAAATCAGTTACCTTAAGGT+TGG 0.483544 3:+92464709 MsG0380017132.01.T01:CDS
TTTATACCAGCTTTCTTACC+AGG 0.484276 3:-92461154 None:intergenic
TCTGTGCAAATCTTATTCTC+TGG 0.489728 3:-92461897 None:intergenic
CTTAAGGTTGGAATCCCGTT+GGG 0.490494 3:+92464721 MsG0380017132.01.T01:CDS
GATGCTATCTGTTCGGAAGT+TGG 0.491272 3:-92461978 None:intergenic
TGTGGTAGAGGGTGTTGAAG+AGG 0.492596 3:+92459386 MsG0380017132.01.T01:CDS
CCATGACCACCAAAGCCATA+TGG 0.494090 3:+92465707 MsG0380017132.01.T01:three_prime_UTR
AAATCTTCATTATAAATCCC+AGG 0.498505 3:+92464746 MsG0380017132.01.T01:CDS
CCCTACAATCTTCCCATCCT+CGG 0.499678 3:-92459127 None:intergenic
GAGAATGAGGATGGTTCTAT+TGG 0.500784 3:+92459318 MsG0380017132.01.T01:CDS
TGGTTCTATTGGTGTTGTAA+AGG 0.501741 3:+92459329 MsG0380017132.01.T01:CDS
GGCCAGTTCATGCCTTTGGT+TGG 0.502823 3:+92462946 MsG0380017132.01.T01:CDS
CACGGTTACTCTTTAATCAA+AGG 0.503950 3:-92465447 None:intergenic
TATTCAGGCCAAAAGTCATC+AGG 0.504957 3:-92465274 None:intergenic
GCAGCAATTGAGTGTAGAAG+AGG 0.505454 3:+92459359 MsG0380017132.01.T01:CDS
TTGGTCTTATGTTTGGGAGA+AGG 0.506799 3:+92459178 MsG0380017132.01.T01:CDS
CTTGACTGCGGAGAATAAAT+GGG 0.506888 3:-92462995 None:intergenic
TTCAAATATCAAATGCAGAA+GGG 0.508191 3:-92465247 None:intergenic
GTTCGGTTTGGTAAATTCCA+AGG 0.508413 3:+92458904 MsG0380017132.01.T01:CDS
CATATCATAATTTGGTGGAT+GGG 0.508503 3:+92465598 MsG0380017132.01.T01:three_prime_UTR
TCAACTCCACCACACTCTCT+TGG 0.509203 3:+92460668 MsG0380017132.01.T01:CDS
GAGGTTATGTATCTTGCTCA+TGG 0.509583 3:+92459456 MsG0380017132.01.T01:CDS
TTTAAGTCAATCACTGGACT+CGG 0.512647 3:+92460997 MsG0380017132.01.T01:CDS
CCGAGGATGGGAAGATTGTA+GGG 0.513816 3:+92459127 MsG0380017132.01.T01:CDS
AAATCATTCCACAACAGAAA+AGG 0.514829 3:-92465566 None:intergenic
GGCGCCACCGAATGGATGAA+AGG 0.515421 3:-92458824 None:intergenic
TGGTGATCATGCTGTGGTAG+TGG 0.519796 3:+92459296 MsG0380017132.01.T01:CDS
GTGAATTTGAAGATGGTGTT+GGG 0.520050 3:+92459211 MsG0380017132.01.T01:CDS
TTTGATGCTAAGAGATGAGC+AGG 0.520197 3:+92465658 MsG0380017132.01.T01:three_prime_UTR
CACTAAGAATGCTGATGTAG+TGG 0.520432 3:+92460403 MsG0380017132.01.T01:CDS
GTGGTAGAGGGTGTTGAAGA+GGG 0.522900 3:+92459387 MsG0380017132.01.T01:CDS
GAAGAGGTTTCTGTGGTAGA+GGG 0.525056 3:+92459375 MsG0380017132.01.T01:CDS
TCTTCCACATTGTACATACT+AGG 0.528135 3:-92460470 None:intergenic
AAAGCAGTTACTGCATGAGC+AGG 0.529161 3:+92461072 MsG0380017132.01.T01:CDS
GCGCCACCGAATGGATGAAA+GGG 0.531603 3:-92458823 None:intergenic
ATTCTCTTCGTCTGAACTCG+AGG 0.531939 3:-92460729 None:intergenic
CTTAATATCCAACAAATTCG+CGG 0.532615 3:-92459256 None:intergenic
CCTAGAAATGAGGATGCTGC+GGG 0.534545 3:+92460896 MsG0380017132.01.T01:CDS
ATTCAACGATGCTATCTGTT+CGG 0.535090 3:-92461985 None:intergenic
GGTGTTGACTGGTCACAGAC+TGG 0.535668 3:+92462967 MsG0380017132.01.T01:CDS
GCCTGCACCTATCCATATCC+AGG 0.536070 3:-92465305 None:intergenic
CCTTAAGGTTGGAATCCCGT+TGG 0.536129 3:+92464720 MsG0380017132.01.T01:CDS
AGCTATGCTGGGGAAACAGC+AGG 0.537208 3:+92462049 MsG0380017132.01.T01:CDS
CCCTAGAAATGAGGATGCTG+CGG 0.537736 3:+92460895 MsG0380017132.01.T01:CDS
ATATCGACGGCGCCACCGAA+TGG 0.539480 3:-92458832 None:intergenic
AGGTTATGTATCTTGCTCAT+GGG 0.540031 3:+92459457 MsG0380017132.01.T01:CDS
CCGCAGCATCCTCATTTCTA+GGG 0.541811 3:-92460895 None:intergenic
GAATGATCGTATCGTGATCT+CGG 0.542030 3:+92462226 MsG0380017132.01.T01:CDS
TTCTTTATCTATATATTCAG+GGG 0.545200 3:-92460810 None:intergenic
TGCTTCCAGTTACAACAGCC+AGG 0.546268 3:+92460589 MsG0380017132.01.T01:CDS
ACCAGAAGAAATATTTGGCA+AGG 0.547394 3:-92460942 None:intergenic
GGTGAATTTGAAGATGGTGT+TGG 0.551028 3:+92459210 MsG0380017132.01.T01:CDS
CATAGTTATCCCTAGAAATG+AGG 0.553207 3:+92460886 MsG0380017132.01.T01:CDS
TTTCAAATATCAAATGCAGA+AGG 0.555472 3:-92465248 None:intergenic
TTGGCATCATTTGGAATAGG+TGG 0.556234 3:-92461852 None:intergenic
TTATACCAGCTTTCTTACCA+GGG 0.560692 3:-92461153 None:intergenic
ACCGAATGGATGAAAGGGAC+CGG 0.561783 3:-92458818 None:intergenic
ATCGTGATCTCGGATGTGGA+TGG 0.562787 3:+92462236 MsG0380017132.01.T01:CDS
CCATTTATTCTCCGCAGTCA+AGG 0.563293 3:+92462996 MsG0380017132.01.T01:CDS
GATCTCCTTGATGTTTCACT+AGG 0.569676 3:-92460701 None:intergenic
CCTTGGTCCTGGATATGGAT+AGG 0.571153 3:+92465298 MsG0380017132.01.T01:three_prime_UTR
TATACAATTATACATTCGAA+TGG 0.572937 3:-92465797 None:intergenic
TCTTCGTCTGAACTCGAGGA+CGG 0.573184 3:-92460725 None:intergenic
TTCTGTATTACAAGTGTGCA+TGG 0.575640 3:+92465504 MsG0380017132.01.T01:three_prime_UTR
TCCTGGATATGGATAGGTGC+AGG 0.577816 3:+92465304 MsG0380017132.01.T01:three_prime_UTR
GTTTACCTAGTGAAACATCA+AGG 0.578560 3:+92460696 MsG0380017132.01.T01:CDS
GAGTGTAGAAGAGGTTTCTG+TGG 0.580182 3:+92459368 MsG0380017132.01.T01:CDS
TTAGAGAGGATGCAAGCGGT+GGG 0.583078 3:+92458754 None:intergenic
TTTCCAAAACCAGCATAGAA+CGG 0.585939 3:-92464673 None:intergenic
GGTCCCTTTCATCCATTCGG+TGG 0.589130 3:+92458820 MsG0380017132.01.T01:CDS
GTGAGTGGTGAATTTGAAGA+TGG 0.589262 3:+92459204 MsG0380017132.01.T01:CDS
TCGTATCGTGATCTCGGATG+TGG 0.593644 3:+92462232 MsG0380017132.01.T01:CDS
ATTAGAGAGGATGCAAGCGG+TGG 0.595958 3:+92458753 None:intergenic
TCACCTGTTTAAGATTCAGT+AGG 0.597998 3:-92463442 None:intergenic
CAAATGTATCTTGATAACAA+AGG 0.598518 3:+92458988 MsG0380017132.01.T01:CDS
CGTTGAATCTGAAGCAAGGG+AGG 0.599581 3:+92462000 MsG0380017132.01.T01:CDS
GCTGTTGTAACTGGAAGCAT+TGG 0.599948 3:-92460585 None:intergenic
TGCTCATGGGGAAACTGGTG+AGG 0.600662 3:+92459470 MsG0380017132.01.T01:CDS
AATTATACATTCGAATGGAA+AGG 0.603129 3:-92465792 None:intergenic
TTACCAAACCGAACGTACCA+TGG 0.604008 3:-92458895 None:intergenic
TCATTTCTAGGGATAACTAT+GGG 0.607928 3:-92460884 None:intergenic
TGCTGTGGTAGTGGAGAATG+AGG 0.610182 3:+92459305 MsG0380017132.01.T01:CDS
CATCGTTGAATCTGAAGCAA+GGG 0.610649 3:+92461997 MsG0380017132.01.T01:CDS
AATCTTCATTATAAATCCCA+GGG 0.611431 3:+92464747 MsG0380017132.01.T01:CDS
ATACGAGTGAATGCAAGACT+TGG 0.615146 3:-92459506 None:intergenic
AAGTGGTCTACGAATCAAGA+TGG 0.615279 3:+92459276 MsG0380017132.01.T01:CDS
TACATTCGAATGGAAAGGAG+TGG 0.616393 3:-92465787 None:intergenic
CAGAATGAATGATCGATACG+AGG 0.617552 3:+92460778 MsG0380017132.01.T01:CDS
GCATCGTTGAATCTGAAGCA+AGG 0.617570 3:+92461996 MsG0380017132.01.T01:CDS
TAGAAATGAGGATGCTGCGG+GGG 0.620903 3:+92460898 MsG0380017132.01.T01:CDS
TAAGAATGCTGATGTAGTGG+AGG 0.623360 3:+92460406 MsG0380017132.01.T01:CDS
CAGTTACTGCATGAGCAGGA+AGG 0.623575 3:+92461076 MsG0380017132.01.T01:CDS
GTGAATGCAAGACTTGGTCA+TGG 0.624514 3:-92459500 None:intergenic
ACCACCATGACACGATCACA+CGG 0.625277 3:-92465465 None:intergenic
GGTTATGTATCTTGCTCATG+GGG 0.626196 3:+92459458 MsG0380017132.01.T01:CDS
ACATTCGAATGGAAAGGAGT+GGG 0.626497 3:-92465786 None:intergenic
AAAATCATATCATAATTTGG+TGG 0.627772 3:+92465593 MsG0380017132.01.T01:three_prime_UTR
TTAAAGGAAAACGAACGTGT+TGG 0.629150 3:-92460979 None:intergenic
ATATCATCAACAGATTCTAA+CGG 0.633327 3:-92459063 None:intergenic
GTACAATGTGGAAGATGTTG+AGG 0.633807 3:+92460478 MsG0380017132.01.T01:CDS
TTAGGGAGCTACATTAGTCA+AGG 0.635109 3:+92458781 MsG0380017132.01.T01:CDS
TTGATGCTCAAATATATCTG+TGG 0.635548 3:+92462198 MsG0380017132.01.T01:CDS
TATACCAGCTTTCTTACCAG+GGG 0.647874 3:-92461152 None:intergenic
AAACAATCACCAAGAGAGTG+TGG 0.649865 3:-92460677 None:intergenic
TAGAACGGATTGCAATCGGA+AGG 0.650304 3:-92464658 None:intergenic
AGAATGAATGATCGATACGA+GGG 0.652534 3:+92460779 MsG0380017132.01.T01:CDS
CAAATATCAAATGCAGAAGG+GGG 0.653360 3:-92465245 None:intergenic
CTCAAGTGAGCAAACTCATG+AGG 0.654134 3:+92459437 MsG0380017132.01.T01:CDS
ATACCAGCTTTCTTACCAGG+GGG 0.659405 3:-92461151 None:intergenic
CTTCAGGGTACGGAAACTAA+GGG 0.659954 3:+92460377 MsG0380017132.01.T01:intron
GTGGTAGTGGAGAATGAGGA+TGG 0.670297 3:+92459309 MsG0380017132.01.T01:CDS
GACCAGTCAACACCAACCAA+AGG 0.670738 3:-92462958 None:intergenic
TTGAACGACGACGATATCGA+CGG 0.672004 3:-92458845 None:intergenic
TACCAGCTTTCTTACCAGGG+GGG 0.681108 3:-92461150 None:intergenic
TGAGCCTAGTATGTACAATG+TGG 0.685162 3:+92460466 MsG0380017132.01.T01:CDS
GTTCATTCAAATCATCACCA+TGG 0.692552 3:+92458878 MsG0380017132.01.T01:CDS
CAATCACCAAGAGAGTGTGG+TGG 0.694828 3:-92460674 None:intergenic
CCTATCCATATCCAGGACCA+AGG 0.695817 3:-92465298 None:intergenic
TTAATTAGAGAGGATGCAAG+CGG 0.696839 3:+92458750 None:intergenic
TTTGGGAGAAGGTCTGTGAG+TGG 0.698399 3:+92459189 MsG0380017132.01.T01:CDS
CTAGAAATGAGGATGCTGCG+GGG 0.704073 3:+92460897 MsG0380017132.01.T01:CDS
AGGATGGGAAGATTGTAGGG+AGG 0.707626 3:+92459130 MsG0380017132.01.T01:CDS
GTAACCGTGTGATCGTGTCA+TGG 0.710694 3:+92465461 MsG0380017132.01.T01:three_prime_UTR
TAGAGAGGATGCAAGCGGTG+GGG 0.712708 3:+92458755 None:intergenic
ATTATGTGATAATAACACGA+AGG 0.713676 3:+92460622 MsG0380017132.01.T01:CDS
TCAAGATGGTGATCATGCTG+TGG 0.730772 3:+92459290 MsG0380017132.01.T01:CDS
ACATAAGCAAACCTTGACTG+CGG 0.730908 3:-92463007 None:intergenic
GTCGTCGTTCAACAACAAGA+CGG 0.732356 3:+92458856 MsG0380017132.01.T01:CDS
ACCGTGTGATCGTGTCATGG+TGG 0.737480 3:+92465464 MsG0380017132.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTAAAAAAAAAAAA+AGG - Chr3:92464782-92464801 None:intergenic 0.0%
!! TAAAACATAAGAAATAATAT+TGG - Chr3:92462158-92462177 None:intergenic 10.0%
!! TAACTTTATAATATTAATCT+TGG + Chr3:92463869-92463888 MsG0380017132.01.T01:intron 10.0%
!! ATTATAGAAACATACATAAA+AGG - Chr3:92462122-92462141 None:intergenic 15.0%
!! TCAAATTTGATCAAATATTA+TGG + Chr3:92462771-92462790 MsG0380017132.01.T01:intron 15.0%
!! TCATATTAAACTAACAAAAA+TGG - Chr3:92465685-92465704 None:intergenic 15.0%
!! TTATAGAAACATACATAAAA+GGG - Chr3:92462121-92462140 None:intergenic 15.0%
!!! ACTTATTTGAGATTATTTAA+TGG + Chr3:92459567-92459586 MsG0380017132.01.T01:intron 15.0%
!!! ATTTTATGTATACATATATC+TGG - Chr3:92464183-92464202 None:intergenic 15.0%
!!! TATTTTTTTCATTCATAACT+GGG + Chr3:92464974-92464993 MsG0380017132.01.T01:intron 15.0%
!!! TTATTTTTTTCATTCATAAC+TGG + Chr3:92464973-92464992 MsG0380017132.01.T01:intron 15.0%
!!! TTTGAATATTAAATAATGGA+AGG - Chr3:92465002-92465021 None:intergenic 15.0%
!! AAAAAAAAAATAATCTACCC+CGG - Chr3:92465054-92465073 None:intergenic 20.0%
!! AAAATCATATCATAATTTGG+TGG + Chr3:92465593-92465612 MsG0380017132.01.T01:three_prime_UTR 20.0%
!! AAAATCTCAAACTAACAATT+TGG + Chr3:92460517-92460536 MsG0380017132.01.T01:CDS 20.0%
!! AAATATTGAAGTTAACTTAG+GGG - Chr3:92464254-92464273 None:intergenic 20.0%
!! ACAAATATTAGATTAAGACA+TGG + Chr3:92461659-92461678 MsG0380017132.01.T01:intron 20.0%
!! ACAAATATTGAAGTTAACTT+AGG - Chr3:92464256-92464275 None:intergenic 20.0%
!! ACTGGTAGATATATAATATA+AGG + Chr3:92464142-92464161 MsG0380017132.01.T01:intron 20.0%
!! CAAATATTGAAGTTAACTTA+GGG - Chr3:92464255-92464274 None:intergenic 20.0%
!! CTTCTTTATCTATATATTCA+GGG - Chr3:92460814-92460833 None:intergenic 20.0%
!! GAAAATATGAAGAAGAAAAA+AGG - Chr3:92463904-92463923 None:intergenic 20.0%
!! GATAACAAATTCATTTCTTT+AGG + Chr3:92461560-92461579 MsG0380017132.01.T01:intron 20.0%
!! GATAATATTTCTTATGAGAA+TGG + Chr3:92460833-92460852 MsG0380017132.01.T01:CDS 20.0%
!! TATACAATTATACATTCGAA+TGG - Chr3:92465800-92465819 None:intergenic 20.0%
!! TATTACCATAAATACTACTA+CGG - Chr3:92462824-92462843 None:intergenic 20.0%
!! TCGAAAATCATATCATAATT+TGG + Chr3:92465590-92465609 MsG0380017132.01.T01:three_prime_UTR 20.0%
!! TCTTCTTTATCTATATATTC+AGG - Chr3:92460815-92460834 None:intergenic 20.0%
!! TGTTATTATCACATAATTCT+CGG - Chr3:92460619-92460638 None:intergenic 20.0%
!! TTATGAAAATAAGCTGAAAA+GGG - Chr3:92459638-92459657 None:intergenic 20.0%
!! TTATTACCAGAAGAAATATT+TGG - Chr3:92460950-92460969 None:intergenic 20.0%
!! TTCTTTATCTATATATTCAG+GGG - Chr3:92460813-92460832 None:intergenic 20.0%
!! TTGATATATTGCCTTAATTA+CGG + Chr3:92463992-92464011 MsG0380017132.01.T01:intron 20.0%
!! TTTCTTTCTCATTGTTAATT+TGG + Chr3:92462359-92462378 MsG0380017132.01.T01:intron 20.0%
!!! AAATTGTTAGTTTGAGATTT+TGG - Chr3:92460518-92460537 None:intergenic 20.0%
!!! AATATATCTTTTTACATTGC+AGG + Chr3:92463547-92463566 MsG0380017132.01.T01:intron 20.0%
!!! AGCTATATTTTATTTCATAG+AGG - Chr3:92462493-92462512 None:intergenic 20.0%
!!! ATTTTAATTCATGGAATTTC+TGG + Chr3:92465216-92465235 MsG0380017132.01.T01:CDS 20.0%
!!! CAATTAAAAATTTTCAACTG+AGG - Chr3:92463325-92463344 None:intergenic 20.0%
!!! CTTATTTTCATAAGTTCTTT+AGG + Chr3:92459645-92459664 MsG0380017132.01.T01:intron 20.0%
!!! TGAAATTTTTCATGAGATTT+AGG + Chr3:92461608-92461627 MsG0380017132.01.T01:intron 20.0%
!!! TTGATCAAATTTGACTTAAA+AGG - Chr3:92462765-92462784 None:intergenic 20.0%
!!! TTTTATTTGATGTTTTAGCA+TGG + Chr3:92463244-92463263 MsG0380017132.01.T01:intron 20.0%
! AAAAAAGGATTTATTTACCC+TGG - Chr3:92464767-92464786 None:intergenic 25.0%
! AAAAAGGATTTATTTACCCT+GGG - Chr3:92464766-92464785 None:intergenic 25.0%
! AAATCTTCATTATAAATCCC+AGG + Chr3:92464746-92464765 MsG0380017132.01.T01:CDS 25.0%
! AATAAGATTTATTGCCTTCA+CGG - Chr3:92463637-92463656 None:intergenic 25.0%
! AATATTAGATTAAGACATGG+TGG + Chr3:92461662-92461681 MsG0380017132.01.T01:intron 25.0%
! AATCATGATTATTGTGAAGT+TGG + Chr3:92462707-92462726 MsG0380017132.01.T01:intron 25.0%
! AATCTTCATTATAAATCCCA+GGG + Chr3:92464747-92464766 MsG0380017132.01.T01:CDS 25.0%
! AATTAACCACATTATCACAT+TGG - Chr3:92463064-92463083 None:intergenic 25.0%
! AATTATACATTCGAATGGAA+AGG - Chr3:92465795-92465814 None:intergenic 25.0%
! ACTGAATTAGTAACAATCTA+TGG + Chr3:92461210-92461229 MsG0380017132.01.T01:intron 25.0%
! ACTGTATATACTGTATTCTA+TGG + Chr3:92461243-92461262 MsG0380017132.01.T01:intron 25.0%
! ATATCATCAACAGATTCTAA+CGG - Chr3:92459066-92459085 None:intergenic 25.0%
! ATATTGATCATCAATCTTTG+AGG + Chr3:92459082-92459101 MsG0380017132.01.T01:CDS 25.0%
! ATGATAAGAATTTAAAAGCC+AGG - Chr3:92463210-92463229 None:intergenic 25.0%
! ATTATGTGATAATAACACGA+AGG + Chr3:92460622-92460641 MsG0380017132.01.T01:CDS 25.0%
! ATTCAAAATAAATAGCATGC+TGG + Chr3:92465015-92465034 MsG0380017132.01.T01:intron 25.0%
! ATTTAGTGAAAAAGAAGGTT+AGG + Chr3:92461946-92461965 MsG0380017132.01.T01:CDS 25.0%
! ATTTCTTTATGCTGGAAAAA+TGG - Chr3:92465858-92465877 None:intergenic 25.0%
! CAAACTAACAATTTGGATAT+AGG + Chr3:92460524-92460543 MsG0380017132.01.T01:CDS 25.0%
! CAATATTTGTTTAAGCTTCA+AGG + Chr3:92464266-92464285 MsG0380017132.01.T01:intron 25.0%
! CATTTAAGTGCTTATGTATA+AGG - Chr3:92459743-92459762 None:intergenic 25.0%
! CTTATGAAAATAAGCTGAAA+AGG - Chr3:92459639-92459658 None:intergenic 25.0%
! GCTTATAGCATGTATTAAAA+TGG + Chr3:92459684-92459703 MsG0380017132.01.T01:intron 25.0%
! TAGAGTAAAATTAAGCATCT+GGG + Chr3:92464027-92464046 MsG0380017132.01.T01:intron 25.0%
! TCTCATAACATGTAAATACA+TGG - Chr3:92463036-92463055 None:intergenic 25.0%
! TGATATATTGCCTTAATTAC+GGG + Chr3:92463993-92464012 MsG0380017132.01.T01:intron 25.0%
! TGATTATAACAGACTAAACA+AGG - Chr3:92462692-92462711 None:intergenic 25.0%
! TGTAAGTTTCACTAAAGATT+TGG + Chr3:92461300-92461319 MsG0380017132.01.T01:intron 25.0%
! TTAGAGTAAAATTAAGCATC+TGG + Chr3:92464026-92464045 MsG0380017132.01.T01:intron 25.0%
! TTCAAATATCAAATGCAGAA+GGG - Chr3:92465250-92465269 None:intergenic 25.0%
! TTGCAATTTATTTGCATTCA+GGG - Chr3:92459975-92459994 None:intergenic 25.0%
! TTTAGTGAAAAAGAAGGTTA+GGG + Chr3:92461947-92461966 MsG0380017132.01.T01:CDS 25.0%
! TTTCAAATATCAAATGCAGA+AGG - Chr3:92465251-92465270 None:intergenic 25.0%
! TTTGCAATTTATTTGCATTC+AGG - Chr3:92459976-92459995 None:intergenic 25.0%
!! ACTTTTCTTACATGATTCAT+TGG + Chr3:92463781-92463800 MsG0380017132.01.T01:intron 25.0%
!! ATAATGAAGATTTTTCCCAA+CGG - Chr3:92464739-92464758 None:intergenic 25.0%
!! CAAATGTATCTTGATAACAA+AGG + Chr3:92458988-92459007 MsG0380017132.01.T01:CDS 25.0%
!! CATATTTTCAGTCATTAGAA+GGG + Chr3:92463915-92463934 MsG0380017132.01.T01:intron 25.0%
!! CTTGAAATTTTACATCCAAT+TGG - Chr3:92462658-92462677 None:intergenic 25.0%
!! GATGATATTTTGCTAATTCA+GGG + Chr3:92465538-92465557 MsG0380017132.01.T01:three_prime_UTR 25.0%
!! TATTAGACACTACTATTTTG+AGG + Chr3:92463698-92463717 MsG0380017132.01.T01:intron 25.0%
!! TCATATTTTCAGTCATTAGA+AGG + Chr3:92463914-92463933 MsG0380017132.01.T01:intron 25.0%
!! TGATGATATTTTGCTAATTC+AGG + Chr3:92465537-92465556 MsG0380017132.01.T01:three_prime_UTR 25.0%
!!! AAAACCACAAATTTTTTACC+TGG + Chr3:92463189-92463208 MsG0380017132.01.T01:intron 25.0%
!!! AACCTTCTTTTTCACTAAAT+TGG - Chr3:92461946-92461965 None:intergenic 25.0%
!!! ACCTTCTTTTTCACTAAATT+GGG - Chr3:92461945-92461964 None:intergenic 25.0%
!!! ATTGCACTATTGATAGTTTT+TGG + Chr3:92463107-92463126 MsG0380017132.01.T01:intron 25.0%
!!! CGTTTCACTTTTAATTTGTT+CGG - Chr3:92464414-92464433 None:intergenic 25.0%
!!! GATTTGAACGATTTTTTCTT+TGG - Chr3:92458941-92458960 None:intergenic 25.0%
!!! TAAAACTTTAAGACCTTGTT+TGG - Chr3:92459807-92459826 None:intergenic 25.0%
!!! TAGTAGTTTTTTCAAAACCT+TGG + Chr3:92460237-92460256 MsG0380017132.01.T01:intron 25.0%
!!! TTGCACTATTGATAGTTTTT+GGG + Chr3:92463108-92463127 MsG0380017132.01.T01:intron 25.0%
!!! TTTTAAAAAGTCTCTAACTC+TGG + Chr3:92462869-92462888 MsG0380017132.01.T01:intron 25.0%
AAACAAAGGAGACATTACAA+TGG - Chr3:92461183-92461202 None:intergenic 30.0%
AAAGCCAGGTAAAAAATTTG+TGG - Chr3:92463196-92463215 None:intergenic 30.0%
AAAGTGAGAATCTATCTTTC+TGG + Chr3:92462268-92462287 MsG0380017132.01.T01:intron 30.0%
AAATAATCACATGCACTAGA+TGG - Chr3:92464314-92464333 None:intergenic 30.0%
AAATCATTCCACAACAGAAA+AGG - Chr3:92465569-92465588 None:intergenic 30.0%
AAATTCATTTCTTTAGGCCT+GGG + Chr3:92461566-92461585 MsG0380017132.01.T01:intron 30.0%
AACCATCAATAGTGCAATAA+TGG - Chr3:92463157-92463176 None:intergenic 30.0%
AAGAAGACATGTAAACTTCT+TGG - Chr3:92465737-92465756 None:intergenic 30.0%
ACCATCAATAGTGCAATAAT+GGG - Chr3:92463156-92463175 None:intergenic 30.0%
ACCCAATTTAGTGAAAAAGA+AGG + Chr3:92461941-92461960 MsG0380017132.01.T01:CDS 30.0%
AGAAGACATGTAAACTTCTT+GGG - Chr3:92465736-92465755 None:intergenic 30.0%
AGAGTAAAATTAAGCATCTG+GGG + Chr3:92464028-92464047 MsG0380017132.01.T01:intron 30.0%
ATATGTTGAAATTCTCCTTC+AGG + Chr3:92460361-92460380 MsG0380017132.01.T01:intron 30.0%
ATCAACAAAGCAACTACATA+AGG - Chr3:92461447-92461466 None:intergenic 30.0%
ATCATTGTTCAGCAAGATTA+AGG - Chr3:92465187-92465206 None:intergenic 30.0%
ATTCAAAATTGCATGCTTAG+AGG + Chr3:92463948-92463967 MsG0380017132.01.T01:intron 30.0%
ATTCAGAGTTTATATCACAC+AGG - Chr3:92465089-92465108 None:intergenic 30.0%
ATTCAGTTGACAGAAAACAA+AGG - Chr3:92461197-92461216 None:intergenic 30.0%
ATTCCTACTGAATCTTAAAC+AGG + Chr3:92463439-92463458 MsG0380017132.01.T01:CDS 30.0%
CAAAATCGAACTTATGTAAC+TGG + Chr3:92464124-92464143 MsG0380017132.01.T01:intron 30.0%
CGTAAAACAATCACTATAGA+CGG - Chr3:92463291-92463310 None:intergenic 30.0%
CTCAAATATATCTGTGGAAA+TGG + Chr3:92462204-92462223 MsG0380017132.01.T01:CDS 30.0%
CTGAAAATTGTTCAAACTTC+TGG - Chr3:92464576-92464595 None:intergenic 30.0%
CTTAATATCCAACAAATTCG+CGG - Chr3:92459259-92459278 None:intergenic 30.0%
GAATTTCAACATATGAGTGT+TGG - Chr3:92460355-92460374 None:intergenic 30.0%
GATAAATATATGTAGAGCAC+TGG + Chr3:92463724-92463743 MsG0380017132.01.T01:intron 30.0%
GTAAAACAATCACTATAGAC+GGG - Chr3:92463290-92463309 None:intergenic 30.0%
GTGAGATATGATATTCATCA+TGG + Chr3:92463823-92463842 MsG0380017132.01.T01:intron 30.0%
TAAAACAATCACTATAGACG+GGG - Chr3:92463289-92463308 None:intergenic 30.0%
TAAGGCAATATATCAACAAG+TGG - Chr3:92463988-92464007 None:intergenic 30.0%
TAGGAATTGTCGTGTAATAT+AGG - Chr3:92463426-92463445 None:intergenic 30.0%
TATAGTCTATGACTGCATTT+AGG - Chr3:92459894-92459913 None:intergenic 30.0%
TATGTTGAAATTCTCCTTCA+GGG + Chr3:92460362-92460381 MsG0380017132.01.T01:intron 30.0%
TCAAATATCAAATGCAGAAG+GGG - Chr3:92465249-92465268 None:intergenic 30.0%
TCACTGATCCATCAATTAAA+TGG - Chr3:92463807-92463826 None:intergenic 30.0%
TCCTTGAATATAAGTTTGTC+AGG + Chr3:92464811-92464830 MsG0380017132.01.T01:intron 30.0%
TGATGAAATCAGTTACCTTA+AGG + Chr3:92464705-92464724 MsG0380017132.01.T01:CDS 30.0%
TGCAAGCTTAAACATAAGAA+AGG - Chr3:92464837-92464856 None:intergenic 30.0%
TGCAGCTCTTAAAAGAATAT+AGG + Chr3:92465330-92465349 MsG0380017132.01.T01:three_prime_UTR 30.0%
TGCGTAATATTTCTTTATGC+TGG - Chr3:92465866-92465885 None:intergenic 30.0%
TGTCAAAGATAGTTGTTTGA+TGG - Chr3:92459835-92459854 None:intergenic 30.0%
TTAATAGTGCGTAACAGTTT+AGG + Chr3:92462608-92462627 MsG0380017132.01.T01:intron 30.0%
TTCAGAATCTTGATAAGCTT+TGG - Chr3:92461104-92461123 None:intergenic 30.0%
TTCATTGGCCATTTAATTGA+TGG + Chr3:92463796-92463815 MsG0380017132.01.T01:intron 30.0%
TTCTTATGTTTAAGCTTGCA+GGG + Chr3:92464837-92464856 MsG0380017132.01.T01:intron 30.0%
TTGATGCTCAAATATATCTG+TGG + Chr3:92462198-92462217 MsG0380017132.01.T01:CDS 30.0%
TTTCATGAGATTTAGGAACT+AGG + Chr3:92461615-92461634 MsG0380017132.01.T01:intron 30.0%
TTTCTTATGTTTAAGCTTGC+AGG + Chr3:92464836-92464855 MsG0380017132.01.T01:intron 30.0%
! AAAACAGATTAGAGTTTTGC+TGG - Chr3:92460324-92460343 None:intergenic 30.0%
! AACAACAGATGTATTGACAA+AGG - Chr3:92462847-92462866 None:intergenic 30.0%
! AACAATTTTCAGCATGATCA+TGG + Chr3:92464584-92464603 MsG0380017132.01.T01:intron 30.0%
! AGCAAAACTCTAATCTGTTT+TGG + Chr3:92460323-92460342 MsG0380017132.01.T01:intron 30.0%
! ATGATTTTGTGTCAAGACTT+CGG - Chr3:92464878-92464897 None:intergenic 30.0%
! ATTACTCCAATGTGATAATG+TGG + Chr3:92463055-92463074 MsG0380017132.01.T01:intron 30.0%
! ATTGCCAAAAAGATCACTTT+TGG - Chr3:92461874-92461893 None:intergenic 30.0%
! CAAATATCTTCAGGTATTGT+CGG - Chr3:92462387-92462406 None:intergenic 30.0%
! CATATCATAATTTGGTGGAT+GGG + Chr3:92465598-92465617 MsG0380017132.01.T01:three_prime_UTR 30.0%
! CATGCAATTTTGAATTCATG+AGG - Chr3:92463943-92463962 None:intergenic 30.0%
! CGTCTAAGTTTAAGCATTTT+AGG - Chr3:92461042-92461061 None:intergenic 30.0%
! GAAATTTTACATCCAATTGG+TGG - Chr3:92462655-92462674 None:intergenic 30.0%
! TAATGAAGATTTTTCCCAAC+GGG - Chr3:92464738-92464757 None:intergenic 30.0%
! TATCTTTTTACATTGCAGGA+TGG + Chr3:92463551-92463570 MsG0380017132.01.T01:intron 30.0%
! TCATATCATAATTTGGTGGA+TGG + Chr3:92465597-92465616 MsG0380017132.01.T01:three_prime_UTR 30.0%
! TCATTTCTAGGGATAACTAT+GGG - Chr3:92460887-92460906 None:intergenic 30.0%
! TGTAAAATTTCAAGTAGACG+AGG + Chr3:92462664-92462683 MsG0380017132.01.T01:intron 30.0%
! TTTTCCTTTAAGTCAATCAC+TGG + Chr3:92460991-92461010 MsG0380017132.01.T01:CDS 30.0%
!! CGAATTTGTTGGATATTAAG+TGG + Chr3:92459259-92459278 MsG0380017132.01.T01:CDS 30.0%
!! GAATACTTGGTCTTATGTTT+GGG + Chr3:92459172-92459191 MsG0380017132.01.T01:CDS 30.0%
!! TAAGTTGTTTTGTCCAAACA+AGG + Chr3:92459791-92459810 MsG0380017132.01.T01:intron 30.0%
!! TCAAATAAGTTGATCCAAAC+AGG - Chr3:92459557-92459576 None:intergenic 30.0%
!! TGCTATAAGCTGTTTTCATA+AGG - Chr3:92459674-92459693 None:intergenic 30.0%
!! TTACGTTTGATTTGATCAAC+AGG + Chr3:92462175-92462194 MsG0380017132.01.T01:intron 30.0%
!!! AGTATTTTGGTAGAGCAAAA+TGG + Chr3:92461372-92461391 MsG0380017132.01.T01:intron 30.0%
!!! ATTTGTGGTTTTAACAGACA+CGG - Chr3:92463181-92463200 None:intergenic 30.0%
!!! CATGATTTTGTTTTCCAACT+TGG - Chr3:92461740-92461759 None:intergenic 30.0%
!!! CTTTGGATTTTAAAACACCT+TGG - Chr3:92458924-92458943 None:intergenic 30.0%
!!! TTGATAGTTTTTGGGTAATG+TGG + Chr3:92463116-92463135 MsG0380017132.01.T01:intron 30.0%
!!! TTTTTTCAAAACCTTGGTCA+TGG + Chr3:92460243-92460262 MsG0380017132.01.T01:intron 30.0%
!!! TTTTTTGTTTCATGTCCTAC+AGG + Chr3:92462911-92462930 MsG0380017132.01.T01:intron 30.0%
AAACTTCTTGGGATTCCATA+TGG - Chr3:92465725-92465744 None:intergenic 35.0%
AATGTATGATCAGTGCATTC+AGG - Chr3:92463087-92463106 None:intergenic 35.0%
AATTCATTTCTTTAGGCCTG+GGG + Chr3:92461567-92461586 MsG0380017132.01.T01:intron 35.0%
ACCAACAAAGTCTACATTCA+GGG + Chr3:92460108-92460127 MsG0380017132.01.T01:intron 35.0%
ACCAGAAGAAATATTTGGCA+AGG - Chr3:92460945-92460964 None:intergenic 35.0%
ACGCAAGTGAATGAAAAGAA+AGG - Chr3:92462565-92462584 None:intergenic 35.0%
ACTAACAGAGTCTACATTCA+GGG - Chr3:92460004-92460023 None:intergenic 35.0%
AGAATGAATGATCGATACGA+GGG + Chr3:92460779-92460798 MsG0380017132.01.T01:CDS 35.0%
AGACTTTGTTGGTCAATTTC+AGG - Chr3:92460101-92460120 None:intergenic 35.0%
AGGTTATGTATCTTGCTCAT+GGG + Chr3:92459457-92459476 MsG0380017132.01.T01:CDS 35.0%
AGTCATAGACTATAGAGAGA+CGG + Chr3:92459900-92459919 MsG0380017132.01.T01:intron 35.0%
AGTGCAAGTTTGATACAATG+AGG + Chr3:92465133-92465152 MsG0380017132.01.T01:intron 35.0%
ATATATCAACAAGTGGAAGC+TGG - Chr3:92463981-92464000 None:intergenic 35.0%
ATGAGCCGTAGTAGTATTTA+TGG + Chr3:92462816-92462835 MsG0380017132.01.T01:intron 35.0%
ATGATAAGTGCTTGTGTTGT+TGG + Chr3:92459760-92459779 MsG0380017132.01.T01:intron 35.0%
ATTCAACGATGCTATCTGTT+CGG - Chr3:92461988-92462007 None:intergenic 35.0%
ATTCAGCAATGAAATTGCAG+AGG - Chr3:92462431-92462450 None:intergenic 35.0%
ATTTCTCATTTGCAGGAGAA+TGG + Chr3:92463359-92463378 MsG0380017132.01.T01:intron 35.0%
CAAAATTATGTAGGCTCTGT+AGG - Chr3:92464441-92464460 None:intergenic 35.0%
CAAATATCAAATGCAGAAGG+GGG - Chr3:92465248-92465267 None:intergenic 35.0%
CAAATTCATTTCTTTAGGCC+TGG + Chr3:92461565-92461584 MsG0380017132.01.T01:intron 35.0%
CACGGTTACTCTTTAATCAA+AGG - Chr3:92465450-92465469 None:intergenic 35.0%
CATAGCTGTAGAAAAAGTGA+AGG - Chr3:92462036-92462055 None:intergenic 35.0%
CATAGTTATCCCTAGAAATG+AGG + Chr3:92460886-92460905 MsG0380017132.01.T01:CDS 35.0%
CGACAATACCTGAAGATATT+TGG + Chr3:92462385-92462404 MsG0380017132.01.T01:intron 35.0%
CTCATGTATGTAGCATTACT+TGG - Chr3:92464215-92464234 None:intergenic 35.0%
CTCATTTACACCCGTAATTA+AGG - Chr3:92464006-92464025 None:intergenic 35.0%
GAAAAAGAGACTTGATACTC+TGG - Chr3:92464639-92464658 None:intergenic 35.0%
GAAATCAGTTACCTTAAGGT+TGG + Chr3:92464709-92464728 MsG0380017132.01.T01:CDS 35.0%
GACATTCATTGCAGAAAATC+TGG + Chr3:92461535-92461554 MsG0380017132.01.T01:intron 35.0%
GACGACTCATTTCATATTCA+GGG - Chr3:92459944-92459963 None:intergenic 35.0%
GACTTTGTTGGTCAATTTCA+GGG - Chr3:92460100-92460119 None:intergenic 35.0%
GATTAAGGACAACAATGTGT+TGG - Chr3:92465172-92465191 None:intergenic 35.0%
GCCTGACAAACTTATATTCA+AGG - Chr3:92464815-92464834 None:intergenic 35.0%
GTATGTAGCATTACTTGGAA+AGG - Chr3:92464210-92464229 None:intergenic 35.0%
GTGAATTTGAAGATGGTGTT+GGG + Chr3:92459211-92459230 MsG0380017132.01.T01:CDS 35.0%
GTTAGACACCAAATATCTTC+AGG - Chr3:92462396-92462415 None:intergenic 35.0%
GTTCATTCAAATCATCACCA+TGG + Chr3:92458878-92458897 MsG0380017132.01.T01:CDS 35.0%
GTTGGAAAACAAAATCATGC+AGG + Chr3:92461741-92461760 MsG0380017132.01.T01:intron 35.0%
GTTTACCTAGTGAAACATCA+AGG + Chr3:92460696-92460715 MsG0380017132.01.T01:CDS 35.0%
TCAATTAAACTCCATGACCA+AGG - Chr3:92460257-92460276 None:intergenic 35.0%
TCACTCACACATAAACAGAA+AGG - Chr3:92464072-92464091 None:intergenic 35.0%
TCAGGGACTAAATTGACTAA+CGG - Chr3:92460019-92460038 None:intergenic 35.0%
TCCCACTTCCAAAATTATGT+AGG - Chr3:92464450-92464469 None:intergenic 35.0%
TCCTTGCCAAATATTTCTTC+TGG + Chr3:92460941-92460960 MsG0380017132.01.T01:CDS 35.0%
TCTGCAATTTCATTGCTGAA+TGG + Chr3:92462430-92462449 MsG0380017132.01.T01:intron 35.0%
TCTGTGCAAATCTTATTCTC+TGG - Chr3:92461900-92461919 None:intergenic 35.0%
TCTTCCACATTGTACATACT+AGG - Chr3:92460473-92460492 None:intergenic 35.0%
TGACGACTCATTTCATATTC+AGG - Chr3:92459945-92459964 None:intergenic 35.0%
TTAAAGGAAAACGAACGTGT+TGG - Chr3:92460982-92461001 None:intergenic 35.0%
TTATACCAGCTTTCTTACCA+GGG - Chr3:92461156-92461175 None:intergenic 35.0%
TTCTGTATTACAAGTGTGCA+TGG + Chr3:92465504-92465523 MsG0380017132.01.T01:three_prime_UTR 35.0%
TTCTGTTTATGTGTGAGTGA+TGG + Chr3:92464072-92464091 MsG0380017132.01.T01:intron 35.0%
TTGCAATTTCTCTGCATTCA+GGG + Chr3:92460137-92460156 MsG0380017132.01.T01:intron 35.0%
TTTAAGTCAATCACTGGACT+CGG + Chr3:92460997-92461016 MsG0380017132.01.T01:CDS 35.0%
TTTATACCAGCTTTCTTACC+AGG - Chr3:92461157-92461176 None:intergenic 35.0%
TTTCCAAAACCAGCATAGAA+CGG - Chr3:92464676-92464695 None:intergenic 35.0%
TTTCGTCAAGGTCACTAAAA+AGG - Chr3:92460757-92460776 None:intergenic 35.0%
TTTGCAATTTCTCTGCATTC+AGG + Chr3:92460136-92460155 MsG0380017132.01.T01:intron 35.0%
TTTGGGTAATGTGGTTAATC+TGG + Chr3:92463125-92463144 MsG0380017132.01.T01:intron 35.0%
! CATTCATTCTGTTTTCGTCA+AGG - Chr3:92460769-92460788 None:intergenic 35.0%
! CTACAGAGCCTACATAATTT+TGG + Chr3:92464439-92464458 MsG0380017132.01.T01:intron 35.0%
! CTCATTTCTAGGGATAACTA+TGG - Chr3:92460888-92460907 None:intergenic 35.0%
! GAGACATGTGTCAAGTATTT+TGG + Chr3:92461359-92461378 MsG0380017132.01.T01:intron 35.0%
! GATGCCAAAAGTGATCTTTT+TGG + Chr3:92461867-92461886 MsG0380017132.01.T01:CDS 35.0%
! TAAAATTAAGCATCTGGGGT+CGG + Chr3:92464032-92464051 MsG0380017132.01.T01:intron 35.0%
! TCACCTGTTTAAGATTCAGT+AGG - Chr3:92463445-92463464 None:intergenic 35.0%
! TCATAGTCTTAAGACCTGTT+TGG + Chr3:92459540-92459559 MsG0380017132.01.T01:intron 35.0%
! TTTCCAGGAAGCATATTTCA+AGG - Chr3:92461419-92461438 None:intergenic 35.0%
! TTTTGGTAGAGCAAAATGGA+AGG + Chr3:92461376-92461395 MsG0380017132.01.T01:intron 35.0%
!! ACATAACACTTGCTGTATGA+AGG + Chr3:92461489-92461508 MsG0380017132.01.T01:intron 35.0%
!! ACTTTTTCTACAGCTATGCT+GGG + Chr3:92462038-92462057 MsG0380017132.01.T01:CDS 35.0%
!! AGATCACTTTTGGCATCATT+TGG - Chr3:92461864-92461883 None:intergenic 35.0%
!! AGCCTACATAATTTTGGAAG+TGG + Chr3:92464445-92464464 MsG0380017132.01.T01:intron 35.0%
!! CATAACACTTGCTGTATGAA+GGG + Chr3:92461490-92461509 MsG0380017132.01.T01:intron 35.0%
!! CGAATACTTGGTCTTATGTT+TGG + Chr3:92459171-92459190 MsG0380017132.01.T01:CDS 35.0%
!! CTACTACATGCTTTAGTTTG+CGG + Chr3:92461337-92461356 MsG0380017132.01.T01:intron 35.0%
!! CTTTTGGCATCATTTGGAAT+AGG - Chr3:92461858-92461877 None:intergenic 35.0%
!! GAGATTTTGGAGATGTTGTT+AGG - Chr3:92460505-92460524 None:intergenic 35.0%
!! GCCTACATAATTTTGGAAGT+GGG + Chr3:92464446-92464465 MsG0380017132.01.T01:intron 35.0%
!! TGGTTCTATTGGTGTTGTAA+AGG + Chr3:92459329-92459348 MsG0380017132.01.T01:CDS 35.0%
!!! CTATGCTGGTTTTGGAAATA+GGG + Chr3:92464678-92464697 MsG0380017132.01.T01:CDS 35.0%
!!! GAGTTGTAATTTTGATTCCG+AGG + Chr3:92459110-92459129 MsG0380017132.01.T01:CDS 35.0%
!!! GTAATTTTGATTCCGAGGAT+GGG + Chr3:92459115-92459134 MsG0380017132.01.T01:CDS 35.0%
!!! TCTATGCTGGTTTTGGAAAT+AGG + Chr3:92464677-92464696 MsG0380017132.01.T01:CDS 35.0%
!!! TGCAGGAGGATTTTAATTCA+TGG + Chr3:92465207-92465226 MsG0380017132.01.T01:intron 35.0%
!!! TGTAATTTTGATTCCGAGGA+TGG + Chr3:92459114-92459133 MsG0380017132.01.T01:CDS 35.0%
AAAAGTCTCTAACTCTGGTG+TGG + Chr3:92462874-92462893 MsG0380017132.01.T01:intron 40.0%
AAACAATCACCAAGAGAGTG+TGG - Chr3:92460680-92460699 None:intergenic 40.0%
AAAGGAGTGGGACTTAACTA+TGG - Chr3:92465777-92465796 None:intergenic 40.0%
AACAAGTACATTATACCCCC+AGG - Chr3:92461586-92461605 None:intergenic 40.0%
AACTTGATCTGACGATATGC+TGG + Chr3:92462310-92462329 MsG0380017132.01.T01:intron 40.0%
AAGCACTCGTAAGACTGTTT+AGG + Chr3:92459593-92459612 MsG0380017132.01.T01:intron 40.0%
AAGTGGTCTACGAATCAAGA+TGG + Chr3:92459276-92459295 MsG0380017132.01.T01:CDS 40.0%
AATAAATAGCATGCTGGTCG+TGG + Chr3:92465021-92465040 MsG0380017132.01.T01:intron 40.0%
AATAACCTTGGTCCTGGATA+TGG + Chr3:92465293-92465312 MsG0380017132.01.T01:three_prime_UTR 40.0%
AATCATCACCATGGTACGTT+CGG + Chr3:92458887-92458906 MsG0380017132.01.T01:CDS 40.0%
AATTCCCCATAGAGAGACAT+AGG + Chr3:92460203-92460222 MsG0380017132.01.T01:intron 40.0%
ACATAAGCAAACCTTGACTG+CGG - Chr3:92463010-92463029 None:intergenic 40.0%
ACATTCGAATGGAAAGGAGT+GGG - Chr3:92465789-92465808 None:intergenic 40.0%
ACGATTCCTATGTCTCTCTA+TGG - Chr3:92460212-92460231 None:intergenic 40.0%
ATAAATAGCATGCTGGTCGT+GGG + Chr3:92465022-92465041 MsG0380017132.01.T01:intron 40.0%
ATACGAGTGAATGCAAGACT+TGG - Chr3:92459509-92459528 None:intergenic 40.0%
ATTCATTTCTTTAGGCCTGG+GGG + Chr3:92461568-92461587 MsG0380017132.01.T01:intron 40.0%
CACTAAGAATGCTGATGTAG+TGG + Chr3:92460403-92460422 MsG0380017132.01.T01:CDS 40.0%
CAGAATGAATGATCGATACG+AGG + Chr3:92460778-92460797 MsG0380017132.01.T01:CDS 40.0%
CGATTCCTATGTCTCTCTAT+GGG - Chr3:92460211-92460230 None:intergenic 40.0%
CTACATAAGGCTGTATTTCC+AGG - Chr3:92461434-92461453 None:intergenic 40.0%
CTCATCTCTTAGCATCAAAC+AGG - Chr3:92465657-92465676 None:intergenic 40.0%
CTGCAAATGAGAAATCGACA+AGG - Chr3:92463354-92463373 None:intergenic 40.0%
CTTGACTGCGGAGAATAAAT+GGG - Chr3:92462998-92463017 None:intergenic 40.0%
GAATGATCGTATCGTGATCT+CGG + Chr3:92462226-92462245 MsG0380017132.01.T01:CDS 40.0%
GACCAACAAAGTCTACATTC+AGG + Chr3:92460107-92460126 MsG0380017132.01.T01:intron 40.0%
GACTAACAGAGTCTACATTC+AGG - Chr3:92460005-92460024 None:intergenic 40.0%
GAGGTTATGTATCTTGCTCA+TGG + Chr3:92459456-92459475 MsG0380017132.01.T01:CDS 40.0%
GATCTCCTTGATGTTTCACT+AGG - Chr3:92460704-92460723 None:intergenic 40.0%
GATTCCTATGTCTCTCTATG+GGG - Chr3:92460210-92460229 None:intergenic 40.0%
GCAAAAAATGCCAGCCAAAT+GGG + Chr3:92459857-92459876 MsG0380017132.01.T01:intron 40.0%
GCCCATTATTGCACTATTGA+TGG + Chr3:92463152-92463171 MsG0380017132.01.T01:intron 40.0%
GCTGGAAAAATGGAATCAAG+CGG - Chr3:92465848-92465867 None:intergenic 40.0%
GGAAAACAAAATCATGCAGG+TGG + Chr3:92461744-92461763 MsG0380017132.01.T01:intron 40.0%
GGTGAATTTGAAGATGGTGT+TGG + Chr3:92459210-92459229 MsG0380017132.01.T01:CDS 40.0%
GGTTATGTATCTTGCTCATG+GGG + Chr3:92459458-92459477 MsG0380017132.01.T01:CDS 40.0%
GTACAATGTGGAAGATGTTG+AGG + Chr3:92460478-92460497 MsG0380017132.01.T01:CDS 40.0%
GTACCTTGAAATATGCTTCC+TGG + Chr3:92461413-92461432 MsG0380017132.01.T01:intron 40.0%
GTCATAGACTATAGAGAGAC+GGG + Chr3:92459901-92459920 MsG0380017132.01.T01:intron 40.0%
GTGAGTGGTGAATTTGAAGA+TGG + Chr3:92459204-92459223 MsG0380017132.01.T01:CDS 40.0%
TAAGAATGCTGATGTAGTGG+AGG + Chr3:92460406-92460425 MsG0380017132.01.T01:CDS 40.0%
TACATTCGAATGGAAAGGAG+TGG - Chr3:92465790-92465809 None:intergenic 40.0%
TAGAGAGGGAAAAAGTCCAT+CGG - Chr3:92463612-92463631 None:intergenic 40.0%
TAGTGCGTAACAGTTTAGGT+TGG + Chr3:92462612-92462631 MsG0380017132.01.T01:intron 40.0%
TATACCAGCTTTCTTACCAG+GGG - Chr3:92461155-92461174 None:intergenic 40.0%
TATTCAGGCCAAAAGTCATC+AGG - Chr3:92465277-92465296 None:intergenic 40.0%
TCAACAAGCAACTCTTCATC+TGG + Chr3:92461771-92461790 MsG0380017132.01.T01:intron 40.0%
TCCCTGAATGTAGACTTTGT+TGG - Chr3:92460112-92460131 None:intergenic 40.0%
TCTTGCTGAACAATGATTGC+AGG + Chr3:92465190-92465209 MsG0380017132.01.T01:intron 40.0%
TGAAATTCTCCTTCAGGGTA+CGG + Chr3:92460367-92460386 MsG0380017132.01.T01:intron 40.0%
TGAGATTTAGGAACTAGGCA+TGG + Chr3:92461620-92461639 MsG0380017132.01.T01:intron 40.0%
TGAGCCTAGTATGTACAATG+TGG + Chr3:92460466-92460485 MsG0380017132.01.T01:CDS 40.0%
TGCAAAAAATGCCAGCCAAA+TGG + Chr3:92459856-92459875 MsG0380017132.01.T01:intron 40.0%
TTAGGGAGCTACATTAGTCA+AGG + Chr3:92458781-92458800 MsG0380017132.01.T01:CDS 40.0%
TTTGATGCTAAGAGATGAGC+AGG + Chr3:92465658-92465677 MsG0380017132.01.T01:three_prime_UTR 40.0%
! ACTTTTGGCCTGAATAACCT+TGG + Chr3:92465281-92465300 MsG0380017132.01.T01:three_prime_UTR 40.0%
! AGTGCGTAACAGTTTAGGTT+GGG + Chr3:92462613-92462632 MsG0380017132.01.T01:intron 40.0%
! CATCGTTGAATCTGAAGCAA+GGG + Chr3:92461997-92462016 MsG0380017132.01.T01:CDS 40.0%
! CTTTTTCTACAGCTATGCTG+GGG + Chr3:92462039-92462058 MsG0380017132.01.T01:CDS 40.0%
! GAGAATGAGGATGGTTCTAT+TGG + Chr3:92459318-92459337 MsG0380017132.01.T01:CDS 40.0%
! GAGTCCAGTGATTGACTTAA+AGG - Chr3:92460998-92461017 None:intergenic 40.0%
! GATGGCAAAGTTTTACCAGA+GGG + Chr3:92463569-92463588 MsG0380017132.01.T01:intron 40.0%
! GGTCTTTGAGTTTCATTCTC+AGG + Chr3:92460427-92460446 MsG0380017132.01.T01:CDS 40.0%
! TCTTTTCATTCACTTGCGTC+AGG + Chr3:92462566-92462585 MsG0380017132.01.T01:intron 40.0%
! TGAAAGAGCCTGATGACTTT+TGG + Chr3:92465266-92465285 MsG0380017132.01.T01:exon 40.0%
! TTGGCATCATTTGGAATAGG+TGG - Chr3:92461855-92461874 None:intergenic 40.0%
!! AGCATAGAACGGATTGCAAT+CGG - Chr3:92464665-92464684 None:intergenic 40.0%
!! CATTTTAGGTCATCTTTGCC+AGG - Chr3:92461028-92461047 None:intergenic 40.0%
!! CTTGTCGATTTCTCATTTGC+AGG + Chr3:92463352-92463371 MsG0380017132.01.T01:intron 40.0%
!! GGAAGCATTGGTAACACAAT+AGG - Chr3:92460576-92460595 None:intergenic 40.0%
!! GTTCGGTTTGGTAAATTCCA+AGG + Chr3:92458904-92458923 MsG0380017132.01.T01:CDS 40.0%
!! TAAACAGAAAGGCATTCACC+TGG - Chr3:92464061-92464080 None:intergenic 40.0%
!! TGTCATGGTGGTGCATATTT+TGG + Chr3:92465476-92465495 MsG0380017132.01.T01:three_prime_UTR 40.0%
!! TTAGGGGATTGACTTGTGAA+TGG - Chr3:92464238-92464257 None:intergenic 40.0%
!! TTGGTCTTATGTTTGGGAGA+AGG + Chr3:92459178-92459197 MsG0380017132.01.T01:CDS 40.0%
!!! AATCCGTTCTATGCTGGTTT+TGG + Chr3:92464670-92464689 MsG0380017132.01.T01:CDS 40.0%
!!! CACTTTTTCTACAGCTATGC+TGG + Chr3:92462037-92462056 MsG0380017132.01.T01:CDS 40.0%
!!! GAACTAGGCATGGTGTTTTT+TGG + Chr3:92461630-92461649 MsG0380017132.01.T01:intron 40.0%
AAAGCAGTTACTGCATGAGC+AGG + Chr3:92461072-92461091 MsG0380017132.01.T01:CDS 45.0%
ACAAGCAACTCTTCATCTGG+TGG + Chr3:92461774-92461793 MsG0380017132.01.T01:intron 45.0%
ACTAACGGAGTCTGCATTCA+GGG - Chr3:92460036-92460055 None:intergenic 45.0%
ACTCTTCATCTGGTGGAAAC+TGG + Chr3:92461781-92461800 MsG0380017132.01.T01:intron 45.0%
AGAAGAGGTTTCTGTGGTAG+AGG + Chr3:92459374-92459393 MsG0380017132.01.T01:CDS 45.0%
AGAGAGGGAAAAAGTCCATC+GGG - Chr3:92463611-92463630 None:intergenic 45.0%
ATACCAGCTTTCTTACCAGG+GGG - Chr3:92461154-92461173 None:intergenic 45.0%
ATCCAGGACCAAGGTTATTC+AGG - Chr3:92465292-92465311 None:intergenic 45.0%
ATGTGTGAGTGATGGTCACT+TGG + Chr3:92464080-92464099 MsG0380017132.01.T01:intron 45.0%
ATTCTCTTCGTCTGAACTCG+AGG - Chr3:92460732-92460751 None:intergenic 45.0%
ATTGCCTTCACGGTATAGAG+AGG - Chr3:92463627-92463646 None:intergenic 45.0%
CACATAATTCTCGGTCATCC+TGG - Chr3:92460610-92460629 None:intergenic 45.0%
CCATTTATTCTCCGCAGTCA+AGG + Chr3:92462996-92463015 MsG0380017132.01.T01:CDS 45.0%
CCTTGACTGCGGAGAATAAA+TGG - Chr3:92462999-92463018 None:intergenic 45.0%
CTCAAGTGAGCAAACTCATG+AGG + Chr3:92459437-92459456 MsG0380017132.01.T01:CDS 45.0%
CTGGTGGAAACTGGAGAATT+TGG + Chr3:92461790-92461809 MsG0380017132.01.T01:intron 45.0%
CTTAAGGTTGGAATCCCGTT+GGG + Chr3:92464721-92464740 MsG0380017132.01.T01:CDS 45.0%
CTTCAGGGTACGGAAACTAA+GGG + Chr3:92460377-92460396 MsG0380017132.01.T01:intron 45.0%
CTTGCATTCACTCGTATCTC+AGG + Chr3:92459512-92459531 MsG0380017132.01.T01:CDS 45.0%
CTTGGGATTCCATATGGCTT+TGG - Chr3:92465719-92465738 None:intergenic 45.0%
GAAATAACAACAGGACCCTC+TGG - Chr3:92463587-92463606 None:intergenic 45.0%
GAAGAGGTTTCTGTGGTAGA+GGG + Chr3:92459375-92459394 MsG0380017132.01.T01:CDS 45.0%
GAGTGTAGAAGAGGTTTCTG+TGG + Chr3:92459368-92459387 MsG0380017132.01.T01:CDS 45.0%
GATGCTATCTGTTCGGAAGT+TGG - Chr3:92461981-92462000 None:intergenic 45.0%
GATTGCAATCCGTTCTATGC+TGG + Chr3:92464664-92464683 MsG0380017132.01.T01:CDS 45.0%
GCAGCAATTGAGTGTAGAAG+AGG + Chr3:92459359-92459378 MsG0380017132.01.T01:CDS 45.0%
GTCATAGCTGTTGACCAAGT+TGG + Chr3:92461723-92461742 MsG0380017132.01.T01:intron 45.0%
GTCGTCGTTCAACAACAAGA+CGG + Chr3:92458856-92458875 MsG0380017132.01.T01:CDS 45.0%
TATCTTGCTCATGGGGAAAC+TGG + Chr3:92459465-92459484 MsG0380017132.01.T01:CDS 45.0%
TCAAGATGGTGATCATGCTG+TGG + Chr3:92459290-92459309 MsG0380017132.01.T01:CDS 45.0%
TCCTACAGGTCAGATGTTCT+TGG + Chr3:92462925-92462944 MsG0380017132.01.T01:intron 45.0%
TCTAAGCGTTCGCGAATACT+TGG + Chr3:92459159-92459178 MsG0380017132.01.T01:CDS 45.0%
TCTAGATCCTGATCTGCTCA+AGG - Chr3:92461823-92461842 None:intergenic 45.0%
TCTATGCATGCACTCGTGAA+TGG + Chr3:92464903-92464922 MsG0380017132.01.T01:intron 45.0%
TGAGATTGCCGCGAATTTGT+TGG + Chr3:92459248-92459267 MsG0380017132.01.T01:CDS 45.0%
TGCAGTTCAATGCCACCAAT+TGG + Chr3:92462640-92462659 MsG0380017132.01.T01:intron 45.0%
TGCTGAACAATGATTGCAGG+AGG + Chr3:92465193-92465212 MsG0380017132.01.T01:intron 45.0%
TTACCAAACCGAACGTACCA+TGG - Chr3:92458898-92458917 None:intergenic 45.0%
TTGAACGACGACGATATCGA+CGG - Chr3:92458848-92458867 None:intergenic 45.0%
TTGCCTTCACGGTATAGAGA+GGG - Chr3:92463626-92463645 None:intergenic 45.0%
TTTCCCTCTCTATACCGTGA+AGG + Chr3:92463620-92463639 MsG0380017132.01.T01:intron 45.0%
! AGTCACTTTAGTCCCTGAGT+GGG - Chr3:92460183-92460202 None:intergenic 45.0%
! GACTACTCTTTTCCCACTCA+GGG + Chr3:92460168-92460187 MsG0380017132.01.T01:intron 45.0%
! GCATCGTTGAATCTGAAGCA+AGG + Chr3:92461996-92462015 MsG0380017132.01.T01:CDS 45.0%
! GCTGTTGTAACTGGAAGCAT+TGG - Chr3:92460588-92460607 None:intergenic 45.0%
! GGATGGCAAAGTTTTACCAG+AGG + Chr3:92463568-92463587 MsG0380017132.01.T01:intron 45.0%
! GGGAACAACCTTTTCTGTTG+TGG + Chr3:92465558-92465577 MsG0380017132.01.T01:three_prime_UTR 45.0%
! GTGAATGCAAGACTTGGTCA+TGG - Chr3:92459503-92459522 None:intergenic 45.0%
! TAGTCACTTTAGTCCCTGAG+TGG - Chr3:92460184-92460203 None:intergenic 45.0%
! TGACTACTCTTTTCCCACTC+AGG + Chr3:92460167-92460186 MsG0380017132.01.T01:intron 45.0%
!! CATATGGCTTTGGTGGTCAT+GGG - Chr3:92465709-92465728 None:intergenic 45.0%
!! GAGCACTGAGAAAAAGCAGT+TGG - Chr3:92463388-92463407 None:intergenic 45.0%
!! TAGAACGGATTGCAATCGGA+AGG - Chr3:92464661-92464680 None:intergenic 45.0%
!!! TTATTTTGAATATTAAATAA+TGG - Chr3:92465006-92465025 None:intergenic 5.0%
ACCACCATGACACGATCACA+CGG - Chr3:92465468-92465487 None:intergenic 50.0%
ACCGAATGGATGAAAGGGAC+CGG - Chr3:92458821-92458840 None:intergenic 50.0%
AGAGGGAAAAAGTCCATCGG+GGG - Chr3:92463609-92463628 None:intergenic 50.0%
AGGATGGGAAGATTGTAGGG+AGG + Chr3:92459130-92459149 MsG0380017132.01.T01:CDS 50.0%
ATCGTGATCTCGGATGTGGA+TGG + Chr3:92462236-92462255 MsG0380017132.01.T01:CDS 50.0%
CAAGGCGTATACACCGTTTC+CGG + Chr3:92458799-92458818 MsG0380017132.01.T01:CDS 50.0%
CAGTTACTGCATGAGCAGGA+AGG + Chr3:92461076-92461095 MsG0380017132.01.T01:CDS 50.0%
CCAACGGGATTCCAACCTTA+AGG - Chr3:92464723-92464742 None:intergenic 50.0%
CCATCGGGGGAAATAACAAC+AGG - Chr3:92463596-92463615 None:intergenic 50.0%
CCATGACCACCAAAGCCATA+TGG + Chr3:92465707-92465726 MsG0380017132.01.T01:three_prime_UTR 50.0%
CCCTACAATCTTCCCATCCT+CGG - Chr3:92459130-92459149 None:intergenic 50.0%
CCCTAGAAATGAGGATGCTG+CGG + Chr3:92460895-92460914 MsG0380017132.01.T01:CDS 50.0%
CCGAGGATGGGAAGATTGTA+GGG + Chr3:92459127-92459146 MsG0380017132.01.T01:CDS 50.0%
CCGCAGCATCCTCATTTCTA+GGG - Chr3:92460898-92460917 None:intergenic 50.0%
CCTAGAAATGAGGATGCTGC+GGG + Chr3:92460896-92460915 MsG0380017132.01.T01:CDS 50.0%
CCTATCCATATCCAGGACCA+AGG - Chr3:92465301-92465320 None:intergenic 50.0%
CCTGATCTGCTCAAGGAGAA+AGG - Chr3:92461816-92461835 None:intergenic 50.0%
CCTTAAGGTTGGAATCCCGT+TGG + Chr3:92464720-92464739 MsG0380017132.01.T01:CDS 50.0%
CCTTAGTTTCCGTACCCTGA+AGG - Chr3:92460379-92460398 None:intergenic 50.0%
CCTTCAGGGTACGGAAACTA+AGG + Chr3:92460376-92460395 MsG0380017132.01.T01:intron 50.0%
CCTTGGTCCTGGATATGGAT+AGG + Chr3:92465298-92465317 MsG0380017132.01.T01:three_prime_UTR 50.0%
CCTTTCTCCTTGAGCAGATC+AGG + Chr3:92461813-92461832 MsG0380017132.01.T01:intron 50.0%
CTAGAAATGAGGATGCTGCG+GGG + Chr3:92460897-92460916 MsG0380017132.01.T01:CDS 50.0%
CTATAGACGGGGTACAGTAC+AGG - Chr3:92463278-92463297 None:intergenic 50.0%
GACCAGTCAACACCAACCAA+AGG - Chr3:92462961-92462980 None:intergenic 50.0%
GACTAACGGAGTCTGCATTC+AGG - Chr3:92460037-92460056 None:intergenic 50.0%
GAGAGGGAAAAAGTCCATCG+GGG - Chr3:92463610-92463629 None:intergenic 50.0%
GCCAAGAACATCTGACCTGT+AGG - Chr3:92462929-92462948 None:intergenic 50.0%
GTAACCGTGTGATCGTGTCA+TGG + Chr3:92465461-92465480 MsG0380017132.01.T01:three_prime_UTR 50.0%
GTCATCCTGGCTGTTGTAAC+TGG - Chr3:92460597-92460616 None:intergenic 50.0%
TACCAGCTTTCTTACCAGGG+GGG - Chr3:92461153-92461172 None:intergenic 50.0%
TAGAAATGAGGATGCTGCGG+GGG + Chr3:92460898-92460917 MsG0380017132.01.T01:CDS 50.0%
TCAACTCCACCACACTCTCT+TGG + Chr3:92460668-92460687 MsG0380017132.01.T01:CDS 50.0%
TCACCATGGTACGTTCGGTT+TGG + Chr3:92458892-92458911 MsG0380017132.01.T01:CDS 50.0%
TCCGAGGATGGGAAGATTGT+AGG + Chr3:92459126-92459145 MsG0380017132.01.T01:CDS 50.0%
TCCGGTCCCTTTCATCCATT+CGG + Chr3:92458817-92458836 MsG0380017132.01.T01:CDS 50.0%
TCCTGGATATGGATAGGTGC+AGG + Chr3:92465304-92465323 MsG0380017132.01.T01:three_prime_UTR 50.0%
TCGTATCGTGATCTCGGATG+TGG + Chr3:92462232-92462251 MsG0380017132.01.T01:CDS 50.0%
TCTTCGTCTGAACTCGAGGA+CGG - Chr3:92460728-92460747 None:intergenic 50.0%
TCTTGGCCAGTTCATGCCTT+TGG + Chr3:92462942-92462961 MsG0380017132.01.T01:CDS 50.0%
TGCTTCCAGTTACAACAGCC+AGG + Chr3:92460589-92460608 MsG0380017132.01.T01:CDS 50.0%
TGGATGAAAGGGACCGGAAA+CGG - Chr3:92458815-92458834 None:intergenic 50.0%
TGGTGATCATGCTGTGGTAG+TGG + Chr3:92459296-92459315 MsG0380017132.01.T01:CDS 50.0%
TTTGGGAGAAGGTCTGTGAG+TGG + Chr3:92459189-92459208 MsG0380017132.01.T01:CDS 50.0%
! CAATCACCAAGAGAGTGTGG+TGG - Chr3:92460677-92460696 None:intergenic 50.0%
! CACCAACCAAAGGCATGAAC+TGG - Chr3:92462951-92462970 None:intergenic 50.0%
! CGTTGAATCTGAAGCAAGGG+AGG + Chr3:92462000-92462019 MsG0380017132.01.T01:CDS 50.0%
!! CCATATGGCTTTGGTGGTCA+TGG - Chr3:92465710-92465729 None:intergenic 50.0%
!! CCTGTTGTTATTTCCCCCGA+TGG + Chr3:92463593-92463612 MsG0380017132.01.T01:intron 50.0%
!! CTGCTCAGAAGTGCTTGTTG+CGG - Chr3:92464937-92464956 None:intergenic 50.0%
!! GGGATTCCATATGGCTTTGG+TGG - Chr3:92465716-92465735 None:intergenic 50.0%
!! GTGGTAGAGGGTGTTGAAGA+GGG + Chr3:92459387-92459406 MsG0380017132.01.T01:CDS 50.0%
!! GTGGTAGTGGAGAATGAGGA+TGG + Chr3:92459309-92459328 MsG0380017132.01.T01:CDS 50.0%
!! TGCCTTTGGTTGGTGTTGAC+TGG + Chr3:92462956-92462975 MsG0380017132.01.T01:CDS 50.0%
!! TGCTCAGAAGTGCTTGTTGC+GGG - Chr3:92464936-92464955 None:intergenic 50.0%
!! TGCTGTGGTAGTGGAGAATG+AGG + Chr3:92459305-92459324 MsG0380017132.01.T01:CDS 50.0%
!! TGTGGTAGAGGGTGTTGAAG+AGG + Chr3:92459386-92459405 MsG0380017132.01.T01:CDS 50.0%
ACCGTGTGATCGTGTCATGG+TGG + Chr3:92465464-92465483 MsG0380017132.01.T01:three_prime_UTR 55.0%
AGCTATGCTGGGGAAACAGC+AGG + Chr3:92462049-92462068 MsG0380017132.01.T01:CDS 55.0%
ATGCAAGCGGTGGGGAGATT+AGG + Chr3:92458763-92458782 MsG0380017132.01.T01:CDS 55.0%
CCCGCAGCATCCTCATTTCT+AGG - Chr3:92460899-92460918 None:intergenic 55.0%
CGCAACAAGCACTTCTGAGC+AGG + Chr3:92464935-92464954 MsG0380017132.01.T01:intron 55.0%
GCCTGCACCTATCCATATCC+AGG - Chr3:92465308-92465327 None:intergenic 55.0%
GCGCCACCGAATGGATGAAA+GGG - Chr3:92458826-92458845 None:intergenic 55.0%
GGCCAGTTCATGCCTTTGGT+TGG + Chr3:92462946-92462965 MsG0380017132.01.T01:CDS 55.0%
GGCCTGAATAACCTTGGTCC+TGG + Chr3:92465287-92465306 MsG0380017132.01.T01:three_prime_UTR 55.0%
GGTCCCTTTCATCCATTCGG+TGG + Chr3:92458820-92458839 MsG0380017132.01.T01:CDS 55.0%
TCACTGGACTCGGCATTTCC+TGG + Chr3:92461007-92461026 MsG0380017132.01.T01:CDS 55.0%
TGCAAGCGGTGGGGAGATTA+GGG + Chr3:92458764-92458783 MsG0380017132.01.T01:CDS 55.0%
TGCTCATGGGGAAACTGGTG+AGG + Chr3:92459470-92459489 MsG0380017132.01.T01:CDS 55.0%
! CAGCCAAATGGGCTTGACGT+GGG + Chr3:92459868-92459887 MsG0380017132.01.T01:intron 55.0%
!! GCTCAGAAGTGCTTGTTGCG+GGG - Chr3:92464935-92464954 None:intergenic 55.0%
!! GGTGTTGACTGGTCACAGAC+TGG + Chr3:92462967-92462986 MsG0380017132.01.T01:CDS 55.0%
ACTACGCTGAATCTCCCCCC+TGG + Chr3:92461136-92461155 MsG0380017132.01.T01:CDS 60.0%
AGGATGCTGCGGGGGAAGTT+GGG + Chr3:92460906-92460925 MsG0380017132.01.T01:CDS 60.0%
AGGCCCACGTCAAGCCCATT+TGG - Chr3:92459874-92459893 None:intergenic 60.0%
ATATCGACGGCGCCACCGAA+TGG - Chr3:92458835-92458854 None:intergenic 60.0%
CCACGTCAAGCCCATTTGGC+TGG - Chr3:92459870-92459889 None:intergenic 60.0%
CTCCCCCCTGGTAAGAAAGC+TGG + Chr3:92461148-92461167 MsG0380017132.01.T01:CDS 60.0%
GGCGCCACCGAATGGATGAA+AGG - Chr3:92458827-92458846 None:intergenic 60.0%
GGGGAAGTTGGGCAGCATAC+AGG + Chr3:92460917-92460936 MsG0380017132.01.T01:CDS 60.0%
! AGCATCTGGGGTCGGATTCC+AGG + Chr3:92464040-92464059 MsG0380017132.01.T01:intron 60.0%
! CCAGCCAAATGGGCTTGACG+TGG + Chr3:92459867-92459886 MsG0380017132.01.T01:intron 60.0%
! TGCTGGTCGTGGGAGAGTAC+CGG + Chr3:92465032-92465051 MsG0380017132.01.T01:intron 60.0%
GAGGATGCTGCGGGGGAAGT+TGG + Chr3:92460905-92460924 MsG0380017132.01.T01:CDS 65.0%
!! CTGGTCGTGGGAGAGTACCG+GGG + Chr3:92465034-92465053 MsG0380017132.01.T01:intron 65.0%
!! GCTGGTCGTGGGAGAGTACC+GGG + Chr3:92465033-92465052 MsG0380017132.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 92458763 92465897 92458763 ID=MsG0380017132.01;Name=MsG0380017132.01
Chr3 mRNA 92458763 92465897 92458763 ID=MsG0380017132.01.T01;Parent=MsG0380017132.01;Name=MsG0380017132.01.T01;_AED=0.32;_eAED=0.33;_QI=0|0.62|0.66|1|0.62|0.66|9|536|741
Chr3 exon 92458763 92459533 92458763 ID=MsG0380017132.01.T01:exon:5290;Parent=MsG0380017132.01.T01
Chr3 exon 92460383 92461169 92460383 ID=MsG0380017132.01.T01:exon:5291;Parent=MsG0380017132.01.T01
Chr3 exon 92461835 92462070 92461835 ID=MsG0380017132.01.T01:exon:5292;Parent=MsG0380017132.01.T01
Chr3 exon 92462197 92462270 92462197 ID=MsG0380017132.01.T01:exon:5293;Parent=MsG0380017132.01.T01
Chr3 exon 92462933 92463017 92462933 ID=MsG0380017132.01.T01:exon:5294;Parent=MsG0380017132.01.T01
Chr3 exon 92463374 92463460 92463374 ID=MsG0380017132.01.T01:exon:5295;Parent=MsG0380017132.01.T01
Chr3 exon 92464640 92464768 92464640 ID=MsG0380017132.01.T01:exon:5296;Parent=MsG0380017132.01.T01
Chr3 exon 92465212 92465351 92465212 ID=MsG0380017132.01.T01:exon:5297;Parent=MsG0380017132.01.T01
Chr3 exon 92465445 92465897 92465445 ID=MsG0380017132.01.T01:exon:5298;Parent=MsG0380017132.01.T01
Chr3 CDS 92458763 92459533 92458763 ID=MsG0380017132.01.T01:cds;Parent=MsG0380017132.01.T01
Chr3 CDS 92460383 92461169 92460383 ID=MsG0380017132.01.T01:cds;Parent=MsG0380017132.01.T01
Chr3 CDS 92461835 92462070 92461835 ID=MsG0380017132.01.T01:cds;Parent=MsG0380017132.01.T01
Chr3 CDS 92462197 92462270 92462197 ID=MsG0380017132.01.T01:cds;Parent=MsG0380017132.01.T01
Chr3 CDS 92462933 92463017 92462933 ID=MsG0380017132.01.T01:cds;Parent=MsG0380017132.01.T01
Chr3 CDS 92463374 92463460 92463374 ID=MsG0380017132.01.T01:cds;Parent=MsG0380017132.01.T01
Chr3 CDS 92464640 92464768 92464640 ID=MsG0380017132.01.T01:cds;Parent=MsG0380017132.01.T01
Chr3 CDS 92465212 92465268 92465212 ID=MsG0380017132.01.T01:cds;Parent=MsG0380017132.01.T01
Chr3 three_prime_UTR 92465269 92465351 92465269 ID=MsG0380017132.01.T01:three_prime_utr;Parent=MsG0380017132.01.T01
Chr3 three_prime_UTR 92465445 92465897 92465445 ID=MsG0380017132.01.T01:three_prime_utr;Parent=MsG0380017132.01.T01
Gene Sequence

>MsG0380017132.01.T01

ATGCAAGCGGTGGGGAGATTAGGGAGCTACATTAGTCAAGGCGTATACACCGTTTCCGGTCCCTTTCATCCATTCGGTGGCGCCGTCGATATCGTCGTCGTTCAACAACAAGACGGTTCATTCAAATCATCACCATGGTACGTTCGGTTTGGTAAATTCCAAGGTGTTTTAAAATCCAAAGAAAAAATCGTTCAAATCAATGTTAATGATGTTGAAGCTGATTTTCAAATGTATCTTGATAACAAAGGAGAAGCATTTTTTCTTAGAGAAGTTGATGCTGATGAAGCAGTTTTGATTGATCCGTTAGAATCTGTTGATGATATTGATCATCAATCTTTGAGGACTAAGAGTTGTAATTTTGATTCCGAGGATGGGAAGATTGTAGGGAGGACTAGTTCTAAGCGTTCGCGAATACTTGGTCTTATGTTTGGGAGAAGGTCTGTGAGTGGTGAATTTGAAGATGGTGTTGGGAATAAAGAACGTGCTGAGATTGCCGCGAATTTGTTGGATATTAAGTGGTCTACGAATCAAGATGGTGATCATGCTGTGGTAGTGGAGAATGAGGATGGTTCTATTGGTGTTGTAAAGGATCAAAAGCAGCAATTGAGTGTAGAAGAGGTTTCTGTGGTAGAGGGTGTTGAAGAGGGTTCTAAAGTGAAGAAGATAGTTTGTTGCTCAAGTGAGCAAACTCATGAGGTTATGTATCTTGCTCATGGGGAAACTGGTGAGGTTCATGTCCATGACCAAGTCTTGCATTCACTCGTATCTCAGGGTACGGAAACTAAGGGAATCACTAAGAATGCTGATGTAGTGGAGGTCTTTGAGTTTCATTCTCAGGTTCAGCAAATAGATTCTGAGCCTAGTATGTACAATGTGGAAGATGTTGAGGACCTAACAACATCTCCAAAATCTCAAACTAACAATTTGGATATAGGTCACTGTTCAAGTGACAAAGCTGAGTCCTATTGTGTTACCAATGCTTCCAGTTACAACAGCCAGGATGACCGAGAATTATGTGATAATAACACGAAGGATAAAGATGTCTCTAGCACATTATCAACTCCACCACACTCTCTTGGTGATTGTTTACCTAGTGAAACATCAAGGAGATCACCGTCCTCGAGTTCAGACGAAGAGAATTTCCTTTTTAGTGACCTTGACGAAAACAGAATGAATGATCGATACGAGGGATCATTAACCCCTGAATATATAGATAAAGAAGATAATATTTCTTATGAGAATGGCACTGAAAATTTAAGAGTGACATCGTGTCCCATAGTTATCCCTAGAAATGAGGATGCTGCGGGGGAAGTTGGGCAGCATACAGGATCCTTGCCAAATATTTCTTCTGGTAATAACAGTATGCGCCAACACGTTCGTTTTCCTTTAAGTCAATCACTGGACTCGGCATTTCCTGGCAAAGATGACCTAAAATGCTTAAACTTAGACGAGTACAAAGAAAAGCAGTTACTGCATGAGCAGGAAGGTGCCAAAGCTTATCAAGATTCTGAAGAATTCAAAGATACTACGCTGAATCTCCCCCCTGGTAAGAAAGCTGGATCTAGAGAATCTTCGCCACCTATTCCAAATGATGCCAAAAGTGATCTTTTTGGCAATTCTCCAGAGAATAAGATTTGCACAGATGTGAACAAAAATGATACTAAACCCAATTTAGTGAAAAAGAAGGTTAGGGAATTAACTCCAACTTCCGAACAGATAGCATCGTTGAATCTGAAGCAAGGGAGGAACATTGTAACCTTCACTTTTTCTACAGCTATGCTGGGGAAACAGCAGGTTGATGCTCAAATATATCTGTGGAAATGGAATGATCGTATCGTGATCTCGGATGTGGATGGAACAATTACAAAGTCAGATGTTCTTGGCCAGTTCATGCCTTTGGTTGGTGTTGACTGGTCACAGACTGGTGTTGCCCATTTATTCTCCGCAGTCAAGGAGAATGGTTACCAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAAGCCTATATTACACGACAATTCCTACTGAATCTTAAACAGAGTATCAAGTCTCTTTTTCCTTCCGATTGCAATCCGTTCTATGCTGGTTTTGGAAATAGGGATACTGATGAAATCAGTTACCTTAAGGTTGGAATCCCGTTGGGAAAAATCTTCATTATAAATCCCAGGGAGGATTTTAATTCATGGAATTTCTGGAAGCTACCCCCTTCTGCATTTGATATTTGA
Protein sequence

>MsG0380017132.01.T01

MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVQQQDGSFKSSPWYVRFGKFQGVLKSKEKIVQINVNDVEADFQMYLDNKGEAFFLREVDADEAVLIDPLESVDDIDHQSLRTKSCNFDSEDGKIVGRTSSKRSRILGLMFGRRSVSGEFEDGVGNKERAEIAANLLDIKWSTNQDGDHAVVVENEDGSIGVVKDQKQQLSVEEVSVVEGVEEGSKVKKIVCCSSEQTHEVMYLAHGETGEVHVHDQVLHSLVSQGTETKGITKNADVVEVFEFHSQVQQIDSEPSMYNVEDVEDLTTSPKSQTNNLDIGHCSSDKAESYCVTNASSYNSQDDRELCDNNTKDKDVSSTLSTPPHSLGDCLPSETSRRSPSSSSDEENFLFSDLDENRMNDRYEGSLTPEYIDKEDNISYENGTENLRVTSCPIVIPRNEDAAGEVGQHTGSLPNISSGNNSMRQHVRFPLSQSLDSAFPGKDDLKCLNLDEYKEKQLLHEQEGAKAYQDSEEFKDTTLNLPPGKKAGSRESSPPIPNDAKSDLFGNSPENKICTDVNKNDTKPNLVKKKVRELTPTSEQIASLNLKQGRNIVTFTFSTAMLGKQQVDAQIYLWKWNDRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAVKENGYQLLFLSARSISQAYITRQFLLNLKQSIKSLFPSDCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPREDFNSWNFWKLPPSAFDI*