Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046753.01.T01 | XP_003609286.1 | 95.146 | 103 | 2 | 1 | 1 | 100 | 1 | 103 | 1.08E-62 | 195 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046753.01.T01 | G7JVC7 | 95.146 | 103 | 2 | 1 | 1 | 100 | 1 | 103 | 5.15e-63 | 195 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048035.01 | MsG0880046753.01 | 0.860152 | 2.520515e-63 | 6.823221e-60 |
MsG0080048302.01 | MsG0880046753.01 | 0.815743 | 7.905268e-52 | 5.496494e-49 |
MsG0180000266.01 | MsG0880046753.01 | 0.810287 | 1.242417e-50 | 7.459150e-48 |
MsG0180000293.01 | MsG0880046753.01 | 0.803955 | 2.722914e-49 | 1.386694e-46 |
MsG0180000479.01 | MsG0880046753.01 | 0.845126 | 4.933589e-59 | 8.139032e-56 |
MsG0180000729.01 | MsG0880046753.01 | 0.833056 | 6.638763e-56 | 7.558986e-53 |
MsG0180000798.01 | MsG0880046753.01 | 0.833675 | 4.653098e-56 | 5.396601e-53 |
MsG0180002183.01 | MsG0880046753.01 | 0.812986 | 3.216629e-51 | 2.074931e-48 |
MsG0880045099.01 | MsG0880046753.01 | 0.837396 | 5.328574e-57 | 6.912214e-54 |
MsG0880045106.01 | MsG0880046753.01 | 0.808480 | 3.034399e-50 | 1.736942e-47 |
MsG0880045118.01 | MsG0880046753.01 | 0.837046 | 6.549805e-57 | 8.406467e-54 |
MsG0880045256.01 | MsG0880046753.01 | 0.860043 | 2.718914e-63 | 7.332972e-60 |
MsG0880045290.01 | MsG0880046753.01 | 0.842665 | 2.250226e-58 | 3.435915e-55 |
MsG0880045293.01 | MsG0880046753.01 | 0.822927 | 1.823313e-53 | 1.547452e-50 |
MsG0880045861.01 | MsG0880046753.01 | 0.834079 | 3.688423e-56 | 4.329973e-53 |
MsG0880046077.01 | MsG0880046753.01 | 0.807116 | 5.913253e-50 | 3.266064e-47 |
MsG0880046251.01 | MsG0880046753.01 | -0.820934 | 5.274810e-53 | 4.231851e-50 |
MsG0880046417.01 | MsG0880046753.01 | 0.805267 | 1.449916e-49 | 7.636913e-47 |
MsG0880046467.01 | MsG0880046753.01 | 0.862363 | 5.345111e-64 | 1.561226e-60 |
MsG0880046586.01 | MsG0880046753.01 | 0.809497 | 1.838034e-50 | 1.080830e-47 |
MsG0880046615.01 | MsG0880046753.01 | 0.844089 | 9.379053e-59 | 1.497730e-55 |
MsG0880046642.01 | MsG0880046753.01 | 0.808734 | 2.677067e-50 | 1.542474e-47 |
MsG0880046669.01 | MsG0880046753.01 | 0.843060 | 1.767382e-58 | 2.732119e-55 |
MsG0880046733.01 | MsG0880046753.01 | 0.817011 | 4.114792e-52 | 2.961872e-49 |
MsG0880046753.01 | MsG0880046779.01 | 0.861137 | 1.266770e-63 | 3.547342e-60 |
MsG0880046753.01 | MsG0880047143.01 | 0.817534 | 3.136864e-52 | 2.290463e-49 |
MsG0880046753.01 | MsG0880047191.01 | 0.819554 | 1.092655e-52 | 8.435645e-50 |
MsG0880046753.01 | MsG0880047497.01 | 0.813303 | 2.740476e-51 | 1.783058e-48 |
MsG0180002912.01 | MsG0880046753.01 | 0.884264 | 2.224641e-71 | 1.458186e-67 |
MsG0180003337.01 | MsG0880046753.01 | 0.801696 | 7.972775e-49 | 3.832201e-46 |
MsG0180003470.01 | MsG0880046753.01 | 0.819097 | 1.389005e-52 | 1.058816e-49 |
MsG0180003690.01 | MsG0880046753.01 | 0.841048 | 6.019064e-58 | 8.736448e-55 |
MsG0180003948.01 | MsG0880046753.01 | 0.883044 | 6.256456e-71 | 3.903517e-67 |
MsG0180004005.01 | MsG0880046753.01 | 0.814838 | 1.256316e-51 | 8.521093e-49 |
MsG0180004060.01 | MsG0880046753.01 | 0.827793 | 1.285402e-54 | 1.253718e-51 |
MsG0180004079.01 | MsG0880046753.01 | 0.841631 | 4.226610e-58 | 6.248036e-55 |
MsG0180004110.01 | MsG0880046753.01 | 0.826512 | 2.605205e-54 | 2.448306e-51 |
MsG0180004111.01 | MsG0880046753.01 | 0.802545 | 5.332299e-49 | 2.619158e-46 |
MsG0180004201.01 | MsG0880046753.01 | 0.818320 | 2.084873e-52 | 1.555508e-49 |
MsG0180004300.01 | MsG0880046753.01 | 0.835881 | 1.295903e-56 | 1.605906e-53 |
MsG0180004325.01 | MsG0880046753.01 | 0.804231 | 2.386201e-49 | 1.223732e-46 |
MsG0180004388.01 | MsG0880046753.01 | 0.823708 | 1.197873e-53 | 1.039476e-50 |
MsG0180004462.01 | MsG0880046753.01 | 0.823131 | 1.634037e-53 | 1.394875e-50 |
MsG0180004651.01 | MsG0880046753.01 | 0.815892 | 7.325461e-52 | 5.113376e-49 |
MsG0180004752.01 | MsG0880046753.01 | 0.806619 | 7.534399e-50 | 4.108223e-47 |
MsG0180004762.01 | MsG0880046753.01 | 0.807439 | 5.052055e-50 | 2.813970e-47 |
MsG0180005172.01 | MsG0880046753.01 | 0.844906 | 5.655692e-59 | 9.265902e-56 |
MsG0180005331.01 | MsG0880046753.01 | 0.809125 | 2.208380e-50 | 1.285853e-47 |
MsG0180006012.01 | MsG0880046753.01 | 0.811093 | 8.316840e-51 | 5.101651e-48 |
MsG0180006016.01 | MsG0880046753.01 | 0.844412 | 7.682910e-59 | 1.239288e-55 |
MsG0180006069.01 | MsG0880046753.01 | 0.824303 | 8.685921e-54 | 7.663254e-51 |
MsG0280006356.01 | MsG0880046753.01 | 0.825733 | 3.991151e-54 | 3.668616e-51 |
MsG0780040442.01 | MsG0880046753.01 | 0.907679 | 3.905622e-81 | 7.002529e-77 |
MsG0780040713.01 | MsG0880046753.01 | 0.848559 | 5.674752e-60 | 1.045474e-56 |
MsG0780040749.01 | MsG0880046753.01 | 0.802772 | 4.787802e-49 | 2.365432e-46 |
MsG0780041589.01 | MsG0880046753.01 | 0.819628 | 1.051256e-52 | 8.132323e-50 |
MsG0780041641.01 | MsG0880046753.01 | 0.818346 | 2.056303e-52 | 1.535426e-49 |
MsG0780041754.01 | MsG0880046753.01 | 0.803855 | 2.855744e-49 | 1.450598e-46 |
MsG0880041883.01 | MsG0880046753.01 | 0.859542 | 3.849981e-63 | 1.020350e-59 |
MsG0880042368.01 | MsG0880046753.01 | 0.821791 | 3.345678e-53 | 2.749159e-50 |
MsG0880042543.01 | MsG0880046753.01 | 0.805245 | 1.464971e-49 | 7.712022e-47 |
MsG0880042589.01 | MsG0880046753.01 | 0.804274 | 2.337266e-49 | 1.200009e-46 |
MsG0880042744.01 | MsG0880046753.01 | 0.838797 | 2.323538e-57 | 3.146361e-54 |
MsG0880042832.01 | MsG0880046753.01 | 0.881175 | 2.984808e-70 | 1.730858e-66 |
MsG0880042843.01 | MsG0880046753.01 | 0.865407 | 6.040584e-65 | 1.963046e-61 |
MsG0880042967.01 | MsG0880046753.01 | 0.841126 | 5.741245e-58 | 8.353696e-55 |
MsG0880043144.01 | MsG0880046753.01 | 0.823182 | 1.589615e-53 | 1.358849e-50 |
MsG0880043262.01 | MsG0880046753.01 | 0.903856 | 2.250704e-79 | 3.391985e-75 |
MsG0880043285.01 | MsG0880046753.01 | 0.806688 | 7.284066e-50 | 3.978862e-47 |
MsG0880043537.01 | MsG0880046753.01 | 0.825804 | 3.837803e-54 | 3.534983e-51 |
MsG0880043745.01 | MsG0880046753.01 | 0.894638 | 2.042324e-75 | 2.047739e-71 |
MsG0880043921.01 | MsG0880046753.01 | 0.801362 | 9.333765e-49 | 4.448978e-46 |
MsG0280010614.01 | MsG0880046753.01 | 0.846833 | 1.694666e-59 | 2.954266e-56 |
MsG0280010739.01 | MsG0880046753.01 | 0.821264 | 4.427434e-53 | 3.584395e-50 |
MsG0280010824.01 | MsG0880046753.01 | 0.804645 | 1.955318e-49 | 1.013575e-46 |
MsG0280011053.01 | MsG0880046753.01 | 0.800874 | 1.174109e-48 | 5.528035e-46 |
MsG0280011446.01 | MsG0880046753.01 | 0.846335 | 2.317329e-59 | 3.975080e-56 |
MsG0280011457.01 | MsG0880046753.01 | 0.807718 | 4.409116e-50 | 2.473740e-47 |
MsG0380011754.01 | MsG0880046753.01 | 0.825685 | 4.096895e-54 | 3.760730e-51 |
MsG0380012008.01 | MsG0880046753.01 | 0.801722 | 7.872484e-49 | 3.786586e-46 |
MsG0380012054.01 | MsG0880046753.01 | 0.826660 | 2.401317e-54 | 2.266300e-51 |
MsG0380013047.01 | MsG0880046753.01 | 0.809189 | 2.139266e-50 | 1.247765e-47 |
MsG0380013480.01 | MsG0880046753.01 | 0.820887 | 5.407797e-53 | 4.332838e-50 |
MsG0380014561.01 | MsG0880046753.01 | 0.812883 | 3.388918e-51 | 2.180084e-48 |
MsG0380014573.01 | MsG0880046753.01 | 0.832332 | 1.004384e-55 | 1.118944e-52 |
MsG0680033623.01 | MsG0880046753.01 | 0.826189 | 3.109827e-54 | 2.895876e-51 |
MsG0680033971.01 | MsG0880046753.01 | 0.827273 | 1.714071e-54 | 1.646893e-51 |
MsG0680034104.01 | MsG0880046753.01 | 0.810607 | 1.059807e-50 | 6.417221e-48 |
MsG0680034450.01 | MsG0880046753.01 | 0.842670 | 2.243571e-58 | 3.426261e-55 |
MsG0480018780.01 | MsG0880046753.01 | 0.830986 | 2.156296e-55 | 2.308806e-52 |
MsG0480018970.01 | MsG0880046753.01 | 0.822922 | 1.827378e-53 | 1.550741e-50 |
MsG0480018998.01 | MsG0880046753.01 | 0.854116 | 1.525092e-61 | 3.370676e-58 |
MsG0480019038.01 | MsG0880046753.01 | 0.824041 | 1.000768e-53 | 8.764140e-51 |
MsG0480019329.01 | MsG0880046753.01 | 0.850499 | 1.632016e-60 | 3.202775e-57 |
MsG0480019816.01 | MsG0880046753.01 | 0.829389 | 5.289365e-55 | 5.406164e-52 |
MsG0480020090.01 | MsG0880046753.01 | 0.847310 | 1.253805e-59 | 2.219133e-56 |
MsG0480020444.01 | MsG0880046753.01 | 0.856971 | 2.242038e-62 | 5.446876e-59 |
MsG0480020445.01 | MsG0880046753.01 | 0.853487 | 2.313157e-61 | 5.006201e-58 |
MsG0480020554.01 | MsG0880046753.01 | 0.836287 | 1.022269e-56 | 1.282638e-53 |
MsG0480020886.01 | MsG0880046753.01 | 0.816774 | 4.650738e-52 | 3.325854e-49 |
MsG0480021001.01 | MsG0880046753.01 | 0.810714 | 1.004956e-50 | 6.102623e-48 |
MsG0480021554.01 | MsG0880046753.01 | 0.852576 | 4.216565e-61 | 8.849303e-58 |
MsG0480021642.01 | MsG0880046753.01 | 0.801880 | 7.308749e-49 | 3.529796e-46 |
MsG0480021928.01 | MsG0880046753.01 | 0.803498 | 3.387145e-49 | 1.704789e-46 |
MsG0480022274.01 | MsG0880046753.01 | 0.868188 | 7.858126e-66 | 2.817273e-62 |
MsG0480022301.01 | MsG0880046753.01 | 0.836940 | 6.970520e-57 | 8.918256e-54 |
MsG0480022479.01 | MsG0880046753.01 | 0.850422 | 1.715174e-60 | 3.358195e-57 |
MsG0480022480.01 | MsG0880046753.01 | 0.894081 | 3.446673e-75 | 3.376336e-71 |
MsG0480022486.01 | MsG0880046753.01 | 0.841150 | 5.658876e-58 | 8.240126e-55 |
MsG0480022507.01 | MsG0880046753.01 | 0.800404 | 1.464280e-48 | 6.812416e-46 |
MsG0480022530.01 | MsG0880046753.01 | 0.867407 | 1.399913e-65 | 4.882914e-62 |
MsG0480022551.01 | MsG0880046753.01 | 0.825371 | 4.861668e-54 | 4.422775e-51 |
MsG0480022971.01 | MsG0880046753.01 | 0.821373 | 4.179762e-53 | 3.394251e-50 |
MsG0480023088.01 | MsG0880046753.01 | 0.819594 | 1.070222e-52 | 8.271562e-50 |
MsG0480023224.01 | MsG0880046753.01 | 0.830158 | 3.437599e-55 | 3.592654e-52 |
MsG0480023318.01 | MsG0880046753.01 | 0.896402 | 3.818426e-76 | 4.124817e-72 |
MsG0480023947.01 | MsG0880046753.01 | 0.858661 | 7.068960e-63 | 1.817714e-59 |
MsG0580024032.01 | MsG0880046753.01 | 0.803041 | 4.211372e-49 | 2.094821e-46 |
MsG0580024035.01 | MsG0880046753.01 | 0.811101 | 8.285517e-51 | 5.083400e-48 |
MsG0580024073.01 | MsG0880046753.01 | 0.838522 | 2.735380e-57 | 3.673090e-54 |
MsG0580024137.01 | MsG0880046753.01 | 0.832265 | 1.043354e-55 | 1.160036e-52 |
MsG0580024204.01 | MsG0880046753.01 | 0.815566 | 8.655493e-52 | 5.988715e-49 |
MsG0580024407.01 | MsG0880046753.01 | 0.822634 | 2.132660e-53 | 1.795198e-50 |
MsG0580024467.01 | MsG0880046753.01 | 0.846290 | 2.383954e-59 | 4.083319e-56 |
MsG0580024575.01 | MsG0880046753.01 | 0.834774 | 2.467956e-56 | 2.958069e-53 |
MsG0580025143.01 | MsG0880046753.01 | 0.807246 | 5.550581e-50 | 3.076289e-47 |
MsG0580025321.01 | MsG0880046753.01 | 0.816323 | 5.867416e-52 | 4.144752e-49 |
MsG0580025327.01 | MsG0880046753.01 | 0.823458 | 1.370060e-53 | 1.180308e-50 |
MsG0580025989.01 | MsG0880046753.01 | 0.805820 | 1.109939e-49 | 5.930255e-47 |
MsG0380015181.01 | MsG0880046753.01 | 0.858379 | 8.581151e-63 | 2.185620e-59 |
MsG0380015931.01 | MsG0880046753.01 | 0.813061 | 3.096285e-51 | 2.001348e-48 |
MsG0380016264.01 | MsG0880046753.01 | 0.830138 | 3.476771e-55 | 3.631448e-52 |
MsG0380016346.01 | MsG0880046753.01 | 0.800969 | 1.123251e-48 | 5.301324e-46 |
MsG0380016348.01 | MsG0880046753.01 | 0.819608 | 1.062455e-52 | 8.214338e-50 |
MsG0380016427.01 | MsG0880046753.01 | 0.857627 | 1.434517e-62 | 3.563465e-59 |
MsG0380016553.01 | MsG0880046753.01 | 0.812492 | 4.126692e-51 | 2.627615e-48 |
MsG0380016964.01 | MsG0880046753.01 | 0.830673 | 2.571858e-55 | 2.728551e-52 |
MsG0380017101.01 | MsG0880046753.01 | 0.851487 | 8.594797e-61 | 1.742280e-57 |
MsG0380017132.01 | MsG0880046753.01 | 0.804616 | 1.982736e-49 | 1.026998e-46 |
MsG0380017135.01 | MsG0880046753.01 | -0.829242 | 5.743707e-55 | 5.845413e-52 |
MsG0380017286.01 | MsG0880046753.01 | 0.847446 | 1.150569e-59 | 2.045638e-56 |
MsG0380017323.01 | MsG0880046753.01 | 0.823097 | 1.663791e-53 | 1.418927e-50 |
MsG0380017403.01 | MsG0880046753.01 | 0.819645 | 1.041552e-52 | 8.061434e-50 |
MsG0380017714.01 | MsG0880046753.01 | 0.877161 | 7.844209e-69 | 3.905287e-65 |
MsG0380017715.01 | MsG0880046753.01 | 0.823686 | 1.211643e-53 | 1.050766e-50 |
MsG0380017940.01 | MsG0880046753.01 | 0.811046 | 8.513664e-51 | 5.216040e-48 |
MsG0380017998.01 | MsG0880046753.01 | 0.807425 | 5.086370e-50 | 2.832097e-47 |
MsG0380018026.01 | MsG0880046753.01 | 0.807196 | 5.688737e-50 | 3.148662e-47 |
MsG0480018126.01 | MsG0880046753.01 | 0.802823 | 4.671636e-49 | 2.311162e-46 |
MsG0480018160.01 | MsG0880046753.01 | 0.817240 | 3.654243e-52 | 2.646741e-49 |
MsG0480018333.01 | MsG0880046753.01 | 0.863571 | 2.263384e-64 | 6.893001e-61 |
MsG0580026212.01 | MsG0880046753.01 | 0.824654 | 7.180198e-54 | 6.400441e-51 |
MsG0580027129.01 | MsG0880046753.01 | 0.853706 | 2.001937e-61 | 4.364132e-58 |
MsG0580027345.01 | MsG0880046753.01 | 0.861819 | 7.849502e-64 | 2.249329e-60 |
MsG0580027773.01 | MsG0880046753.01 | 0.843451 | 1.390446e-58 | 2.176377e-55 |
MsG0580028185.01 | MsG0880046753.01 | 0.837819 | 4.149654e-57 | 5.454328e-54 |
MsG0580029189.01 | MsG0880046753.01 | 0.851038 | 1.151389e-60 | 2.300238e-57 |
MsG0580029583.01 | MsG0880046753.01 | 0.843595 | 1.272068e-58 | 2.000256e-55 |
MsG0580029767.01 | MsG0880046753.01 | 0.815989 | 6.969192e-52 | 4.877953e-49 |
MsG0580029906.01 | MsG0880046753.01 | 0.803548 | 3.307755e-49 | 1.667016e-46 |
MsG0580029930.01 | MsG0880046753.01 | 0.837839 | 4.100582e-57 | 5.393289e-54 |
MsG0580029950.01 | MsG0880046753.01 | 0.810553 | 1.088766e-50 | 6.582916e-48 |
MsG0580029960.01 | MsG0880046753.01 | 0.851321 | 9.580049e-61 | 1.931951e-57 |
MsG0580030235.01 | MsG0880046753.01 | 0.806194 | 9.259316e-50 | 4.994722e-47 |
MsG0280006581.01 | MsG0880046753.01 | 0.839644 | 1.401096e-57 | 1.947044e-54 |
MsG0280006586.01 | MsG0880046753.01 | 0.825303 | 5.045343e-54 | 4.581139e-51 |
MsG0280007071.01 | MsG0880046753.01 | 0.811498 | 6.794914e-51 | 4.212885e-48 |
MsG0280007253.01 | MsG0880046753.01 | 0.852028 | 6.039356e-61 | 1.245562e-57 |
MsG0280007607.01 | MsG0880046753.01 | 0.812155 | 4.886464e-51 | 3.083379e-48 |
MsG0280007609.01 | MsG0880046753.01 | 0.810380 | 1.186347e-50 | 7.139938e-48 |
MsG0280007610.01 | MsG0880046753.01 | 0.831754 | 1.395367e-55 | 1.528651e-52 |
MsG0280007957.01 | MsG0880046753.01 | 0.814402 | 1.568983e-51 | 1.051790e-48 |
MsG0280008073.01 | MsG0880046753.01 | 0.802690 | 4.977842e-49 | 2.454098e-46 |
MsG0280008116.01 | MsG0880046753.01 | 0.804717 | 1.888971e-49 | 9.810422e-47 |
MsG0280008557.01 | MsG0880046753.01 | -0.808848 | 2.531701e-50 | 1.463145e-47 |
MsG0280008590.01 | MsG0880046753.01 | 0.832401 | 9.654643e-56 | 1.077952e-52 |
MsG0280008856.01 | MsG0880046753.01 | 0.888599 | 5.119005e-73 | 3.991879e-69 |
MsG0280009514.01 | MsG0880046753.01 | 0.808916 | 2.448254e-50 | 1.417465e-47 |
MsG0280010354.01 | MsG0880046753.01 | 0.836065 | 1.164161e-56 | 1.450741e-53 |
MsG0280010389.01 | MsG0880046753.01 | 0.847285 | 1.273933e-59 | 2.253103e-56 |
MsG0280010391.01 | MsG0880046753.01 | 0.804474 | 2.123313e-49 | 1.095765e-46 |
MsG0280010459.01 | MsG0880046753.01 | 0.833342 | 5.634355e-56 | 6.470854e-53 |
MsG0680035777.01 | MsG0880046753.01 | 0.853768 | 1.920865e-61 | 4.196050e-58 |
MsG0780036177.01 | MsG0880046753.01 | -0.821031 | 5.010380e-53 | 4.030804e-50 |
MsG0780036852.01 | MsG0880046753.01 | 0.836763 | 7.733574e-57 | 9.841905e-54 |
MsG0780036876.01 | MsG0880046753.01 | 0.832043 | 1.183622e-55 | 1.307693e-52 |
MsG0780037109.01 | MsG0880046753.01 | 0.827489 | 1.520795e-54 | 1.470367e-51 |
MsG0780037515.01 | MsG0880046753.01 | 0.824949 | 6.116354e-54 | 5.498137e-51 |
MsG0780037599.01 | MsG0880046753.01 | 0.859564 | 3.790000e-63 | 1.005222e-59 |
MsG0780037895.01 | MsG0880046753.01 | 0.802496 | 5.458347e-49 | 2.677661e-46 |
MsG0780038113.01 | MsG0880046753.01 | 0.804313 | 2.293892e-49 | 1.178930e-46 |
MsG0780038444.01 | MsG0880046753.01 | 0.843648 | 1.231077e-58 | 1.939118e-55 |
MsG0780038495.01 | MsG0880046753.01 | 0.855168 | 7.560669e-62 | 1.729761e-58 |
MsG0780038857.01 | MsG0880046753.01 | 0.808991 | 2.358719e-50 | 1.368424e-47 |
MsG0780038925.01 | MsG0880046753.01 | 0.806397 | 8.392386e-50 | 4.550216e-47 |
MsG0780039430.01 | MsG0880046753.01 | 0.853122 | 2.944768e-61 | 6.294994e-58 |
MsG0780039450.01 | MsG0880046753.01 | 0.804085 | 2.558859e-49 | 1.307445e-46 |
MsG0780040060.01 | MsG0880046753.01 | 0.822514 | 2.274331e-53 | 1.907860e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046753.01.T01 | MTR_4g114050 | 95.146 | 103 | 2 | 1 | 1 | 100 | 1 | 103 | 1.31e-66 | 195 |
MsG0880046753.01.T01 | MTR_4g011060 | 55.319 | 94 | 30 | 4 | 1 | 83 | 1 | 93 | 5.48e-24 | 88.6 |
MsG0880046753.01.T01 | MTR_2g103380 | 40.496 | 121 | 46 | 4 | 1 | 98 | 1 | 118 | 2.72e-21 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046753.01.T01 | AT5G20100 | 47.312 | 93 | 33 | 4 | 4 | 81 | 3 | 94 | 1.59e-17 | 72.0 |
Find 21 sgRNAs with CRISPR-Local
Find 24 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAACGTTGACCGATCGATA+TGG | 0.363606 | 8:-77679952 | None:intergenic |
AAGGTTCATCAGGATTGGTT+TGG | 0.367840 | 8:+77679833 | MsG0880046753.01.T01:CDS |
TGGGATGATAAATTCTTGTC+TGG | 0.375061 | 8:+77679853 | MsG0880046753.01.T01:CDS |
AGGTTCATCAGGATTGGTTT+GGG | 0.391343 | 8:+77679834 | MsG0880046753.01.T01:CDS |
TTCAGGAGACAAGGTTCATC+AGG | 0.416255 | 8:+77679823 | MsG0880046753.01.T01:CDS |
AGAAATCATTAGCATCATTC+AGG | 0.448473 | 8:+77679806 | MsG0880046753.01.T01:CDS |
GAGACAAGGTTCATCAGGAT+TGG | 0.459463 | 8:+77679828 | MsG0880046753.01.T01:CDS |
AAACCACATGTTGAAACCTT+AGG | 0.466270 | 8:-77680000 | None:intergenic |
TTGGAGAGAAGCAGATCAGC+TGG | 0.478654 | 8:+77679922 | MsG0880046753.01.T01:CDS |
TTTGTGGAAGAAGCAGCAAC+TGG | 0.482811 | 8:-77680042 | None:intergenic |
GAACAAGAGAGTGCATCAAC+TGG | 0.483164 | 8:+77679895 | MsG0880046753.01.T01:CDS |
AATTGACCCACCTTCTCCTA+AGG | 0.490014 | 8:+77679984 | MsG0880046753.01.T01:CDS |
TCTTGATTTAGGATTATTTG+TGG | 0.511223 | 8:-77680058 | None:intergenic |
TCTCCTAAGGTTTCAACATG+TGG | 0.535168 | 8:+77679997 | MsG0880046753.01.T01:CDS |
GTTGAAACCTTAGGAGAAGG+TGG | 0.589036 | 8:-77679991 | None:intergenic |
CATGTTGAAACCTTAGGAGA+AGG | 0.634843 | 8:-77679994 | None:intergenic |
GAAGGTGGGTCAATTGATGT+TGG | 0.642101 | 8:-77679976 | None:intergenic |
TGGAGCAAGACCATATCGAT+CGG | 0.648883 | 8:+77679942 | MsG0880046753.01.T01:CDS |
TTGAAACCTTAGGAGAAGGT+GGG | 0.649865 | 8:-77679990 | None:intergenic |
TTAGCATCATTCAGGAGACA+AGG | 0.658604 | 8:+77679814 | MsG0880046753.01.T01:CDS |
GAGTGCATCAACTGGCACGT+TGG | 0.684698 | 8:+77679903 | MsG0880046753.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GATCTTCTTTTTCTTGATTT+AGG | - | Chr8:77680072-77680091 | None:intergenic | 25.0% |
!! | TCTTGATTTAGGATTATTTG+TGG | - | Chr8:77680061-77680080 | None:intergenic | 25.0% |
AGAAATCATTAGCATCATTC+AGG | + | Chr8:77679806-77679825 | MsG0880046753.01.T01:CDS | 30.0% | |
AAACCACATGTTGAAACCTT+AGG | - | Chr8:77680003-77680022 | None:intergenic | 35.0% | |
TGGGATGATAAATTCTTGTC+TGG | + | Chr8:77679853-77679872 | MsG0880046753.01.T01:CDS | 35.0% | |
! | GTTTCAACATGTGGTTTTTG+TGG | + | Chr8:77680006-77680025 | MsG0880046753.01.T01:CDS | 35.0% |
!!! | TGTGGTTTTTGTGGTTTGTT+TGG | + | Chr8:77680015-77680034 | MsG0880046753.01.T01:CDS | 35.0% |
CATGTTGAAACCTTAGGAGA+AGG | - | Chr8:77679997-77680016 | None:intergenic | 40.0% | |
TCTCCTAAGGTTTCAACATG+TGG | + | Chr8:77679997-77680016 | MsG0880046753.01.T01:CDS | 40.0% | |
TTAGCATCATTCAGGAGACA+AGG | + | Chr8:77679814-77679833 | MsG0880046753.01.T01:CDS | 40.0% | |
TTGAAACCTTAGGAGAAGGT+GGG | - | Chr8:77679993-77680012 | None:intergenic | 40.0% | |
!! | AAGGTTCATCAGGATTGGTT+TGG | + | Chr8:77679833-77679852 | MsG0880046753.01.T01:CDS | 40.0% |
!! | AGGTTCATCAGGATTGGTTT+GGG | + | Chr8:77679834-77679853 | MsG0880046753.01.T01:CDS | 40.0% |
AATTGACCCACCTTCTCCTA+AGG | + | Chr8:77679984-77680003 | MsG0880046753.01.T01:CDS | 45.0% | |
GAAGGTGGGTCAATTGATGT+TGG | - | Chr8:77679979-77679998 | None:intergenic | 45.0% | |
GAGACAAGGTTCATCAGGAT+TGG | + | Chr8:77679828-77679847 | MsG0880046753.01.T01:CDS | 45.0% | |
GTTGAAACCTTAGGAGAAGG+TGG | - | Chr8:77679994-77680013 | None:intergenic | 45.0% | |
TGGAGCAAGACCATATCGAT+CGG | + | Chr8:77679942-77679961 | MsG0880046753.01.T01:CDS | 45.0% | |
TTCAGGAGACAAGGTTCATC+AGG | + | Chr8:77679823-77679842 | MsG0880046753.01.T01:CDS | 45.0% | |
TTTGTGGAAGAAGCAGCAAC+TGG | - | Chr8:77680045-77680064 | None:intergenic | 45.0% | |
! | GAACAAGAGAGTGCATCAAC+TGG | + | Chr8:77679895-77679914 | MsG0880046753.01.T01:CDS | 45.0% |
GCAACGTTGACCGATCGATA+TGG | - | Chr8:77679955-77679974 | None:intergenic | 50.0% | |
TTGGAGAGAAGCAGATCAGC+TGG | + | Chr8:77679922-77679941 | MsG0880046753.01.T01:CDS | 50.0% | |
GAGTGCATCAACTGGCACGT+TGG | + | Chr8:77679903-77679922 | MsG0880046753.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 77679793 | 77680095 | 77679793 | ID=MsG0880046753.01;Name=MsG0880046753.01 |
Chr8 | mRNA | 77679793 | 77680095 | 77679793 | ID=MsG0880046753.01.T01;Parent=MsG0880046753.01;Name=MsG0880046753.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|100 |
Chr8 | exon | 77679793 | 77680095 | 77679793 | ID=MsG0880046753.01.T01:exon:33226;Parent=MsG0880046753.01.T01 |
Chr8 | CDS | 77679793 | 77680095 | 77679793 | ID=MsG0880046753.01.T01:cds;Parent=MsG0880046753.01.T01 |
Gene Sequence |
Protein sequence |