AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017196.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017196.01.T01 MTR_3g102760 97.396 384 10 0 42 425 7 390 0.0 776
MsG0380017196.01.T01 MTR_3g102730 82.031 384 69 0 42 425 7 390 0.0 683
MsG0380017196.01.T01 MTR_3g013890 81.771 384 70 0 42 425 7 390 0.0 682
MsG0380017196.01.T01 MTR_3g102770 82.812 384 65 1 42 425 7 389 0.0 671
MsG0380017196.01.T01 MTR_1g018610 74.479 384 97 1 42 425 41 423 0.0 612
MsG0380017196.01.T01 MTR_1g018590 73.854 371 96 1 55 425 25 394 0.0 586
MsG0380017196.01.T01 MTR_1g018580 69.542 371 88 2 55 425 19 364 0.0 537
MsG0380017196.01.T01 MTR_4g073090 42.359 373 202 8 61 425 5 372 6.64e-97 295
MsG0380017196.01.T01 MTR_4g121590 41.779 371 203 8 63 425 7 372 1.06e-94 290
MsG0380017196.01.T01 MTR_4g121570 42.318 371 201 9 63 425 7 372 1.39e-94 289
MsG0380017196.01.T01 MTR_3g463660 40.310 387 202 12 55 425 2 375 4.93e-83 259
MsG0380017196.01.T01 MTR_8g100030 59.770 87 28 3 1 87 3 82 9.81e-22 90.9
MsG0380017196.01.T01 MTR_6g076070 77.083 48 11 0 1 48 1 48 7.75e-21 87.8
MsG0380017196.01.T01 MTR_3g116190 84.444 45 7 0 1 45 1 45 7.75e-20 83.6
MsG0380017196.01.T01 MTR_6g029430 84.444 45 7 0 1 45 94 138 9.22e-20 85.5
MsG0380017196.01.T01 MTR_5g092780 88.372 43 5 0 1 43 1 43 3.43e-19 83.2
MsG0380017196.01.T01 MTR_6g038430 78.571 42 9 0 1 42 64 105 2.13e-18 80.9
MsG0380017196.01.T01 MTR_3g031970 72.917 48 13 0 1 48 5 52 6.46e-18 79.7
MsG0380017196.01.T01 MTR_5g089650 74.000 50 13 0 1 50 5 54 8.68e-18 78.6
MsG0380017196.01.T01 MTR_8g066785 66.667 51 17 0 1 51 29 79 6.49e-17 75.9
MsG0380017196.01.T01 MTR_7g045640 75.556 45 11 0 1 45 6 50 3.82e-16 72.4
MsG0380017196.01.T01 MTR_1g043790 56.000 75 16 4 1 74 1 59 9.93e-15 69.7
MsG0380017196.01.T01 MTR_1g087480 64.444 45 12 1 1 45 1 41 1.38e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017196.01.T01 AT4G24220 72.396 384 104 2 42 425 7 388 0.0 593
MsG0380017196.01.T01 AT4G24220 73.210 377 99 2 49 425 13 387 0.0 589
MsG0380017196.01.T01 AT5G58750 38.360 378 212 14 61 425 8 377 1.23e-74 238
MsG0380017196.01.T01 AT5G58750 38.360 378 212 14 61 425 16 385 1.54e-74 238

Find 150 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAGACCTCAAGTTATATT+TGG 0.177145 3:+93214580 MsG0380017196.01.T01:CDS
ACGGGTTTGGGTATGGGTTC+GGG 0.191186 3:+93212118 None:intergenic
TGATCGCAGAGCAACATATT+TGG 0.222774 3:+93214743 MsG0380017196.01.T01:CDS
CCAACTTATGAGCGAATTCT+TGG 0.240216 3:-93215094 None:intergenic
TCCTGAGTGTAATAGAAATT+TGG 0.246429 3:-93214505 None:intergenic
CAGTTTGGGATTGAGGAGTA+TGG 0.252856 3:+93214859 MsG0380017196.01.T01:CDS
ACGGGGAAAACCCGTCAAAT+TGG 0.262886 3:+93212226 MsG0380017196.01.T01:CDS
GACGGGTTTGGGTATGGGTT+CGG 0.267597 3:+93212117 None:intergenic
CGTCAAATTGGGTTTGGTTC+GGG 0.302615 3:+93212238 MsG0380017196.01.T01:CDS
ACTTACACAAACATCATTCA+TGG 0.316295 3:-93215147 None:intergenic
CACGGAGGATTTACCGCGTT+TGG 0.319336 3:+93214477 MsG0380017196.01.T01:CDS
GATTGGATGATCGGCGTTCC+AGG 0.326567 3:-93214182 None:intergenic
TGGCGGAGATTCGGTGCGTT+TGG 0.333098 3:-93214373 None:intergenic
GCCGAAAACTGTGAAGTTAA+TGG 0.340211 3:+93214316 MsG0380017196.01.T01:CDS
GAAACAACTCTGGAAGGTTT+TGG 0.342244 3:+93214831 MsG0380017196.01.T01:CDS
ACAAGATTCATCAAGCTATA+AGG 0.350102 3:-93214610 None:intergenic
TTGGTTCGGGCGGGCAACCG+CGG 0.359142 3:+93212251 MsG0380017196.01.T01:CDS
GATCGCAGAGCAACATATTT+GGG 0.360846 3:+93214744 MsG0380017196.01.T01:CDS
CCGTCAAATTGGGTTTGGTT+CGG 0.362766 3:+93212237 MsG0380017196.01.T01:CDS
GGTGTTCCGTTGAAATTTCC+TGG 0.364427 3:+93214673 MsG0380017196.01.T01:CDS
TCCTGGTACAAGGGGAGCTT+GGG 0.365006 3:+93214690 MsG0380017196.01.T01:CDS
CACAACAACATAATGATAAA+CGG 0.365096 3:-93215213 None:intergenic
GACTGTAGATAGCATGAATA+AGG 0.368144 3:+93215038 MsG0380017196.01.T01:CDS
AACGCTTCGTTCTTAGCATA+AGG 0.371139 3:-93214778 None:intergenic
GGCGGAGATTCGGTGCGTTT+GGG 0.377437 3:-93214372 None:intergenic
GTCAGTGAGAACAGAGAGTT+TGG 0.382260 3:-93214248 None:intergenic
ACAACAACATAATGATAAAC+GGG 0.382511 3:-93215212 None:intergenic
GGCAGAACAGTTTGGGATTG+AGG 0.382571 3:+93214852 MsG0380017196.01.T01:CDS
TACCCAAACCCAGTCAAAAC+GGG 0.384169 3:+93212208 MsG0380017196.01.T01:CDS
ACGGGTATGGGATGGGTAAC+GGG 0.387438 3:-93212156 None:intergenic
GGGATGGGTAACGGGTATAT+AGG 0.388899 3:-93212148 None:intergenic
GGACTAATCATCGGAGTAAC+CGG 0.391043 3:+93214064 MsG0380017196.01.T01:CDS
CCGACACACCAGGCGGTAGA+TGG 0.391919 3:+93214125 MsG0380017196.01.T01:CDS
GTCGGCTAGCGGTAGAATTT+CGG 0.392703 3:-93214107 None:intergenic
GAGAACAGAGAGTTTGGTTT+GGG 0.392745 3:-93214242 None:intergenic
TGAAGGATAAGGGTCCTGTT+TGG 0.400714 3:+93214923 MsG0380017196.01.T01:CDS
TGGTTCGGGCGGGCAACCGC+GGG 0.401505 3:+93212252 MsG0380017196.01.T01:CDS
AAAACCCGTCAAATTGGGTT+TGG 0.401566 3:+93212232 MsG0380017196.01.T01:CDS
CGGGTTTGGGTATGGGTTCG+GGG 0.402270 3:+93212119 None:intergenic
CGGGGAAAACCCGTCAAATT+GGG 0.406318 3:+93212227 MsG0380017196.01.T01:CDS
GTTTGGGTATGGGTTCGGGG+TGG 0.408226 3:+93212122 None:intergenic
CGTTGAAATTTCCTGGTACA+AGG 0.410176 3:+93214680 MsG0380017196.01.T01:CDS
CACACATATTCTACGTCTCT+TGG 0.413265 3:+93214275 MsG0380017196.01.T01:CDS
TATAGCTTGATGAATCTTGT+TGG 0.417022 3:+93214613 MsG0380017196.01.T01:CDS
GGCTAAAGAGCATGGGTTTG+TGG 0.418098 3:+93215059 MsG0380017196.01.T01:CDS
TTCCTGGTACAAGGGGAGCT+TGG 0.420760 3:+93214689 MsG0380017196.01.T01:CDS
TGGTTTGTGGATCTTATGTT+TGG 0.428255 3:+93215006 MsG0380017196.01.T01:CDS
GGTTGGTGAATGGTGGTTTG+TGG 0.435395 3:+93214993 MsG0380017196.01.T01:CDS
TTTGGGTATGGGTTCGGGGT+GGG 0.438313 3:+93212123 None:intergenic
TTCACAATCTCATCCCAAAC+AGG 0.445292 3:-93214937 None:intergenic
CCGATTTCAAAACACGGGTA+TGG 0.446888 3:-93212169 None:intergenic
CGATCAGATCAAACGGTCCT+AGG 0.448172 3:-93214426 None:intergenic
TTTGTGGATCTTATGTTTGG+AGG 0.448637 3:+93215009 MsG0380017196.01.T01:CDS
CCCGTCGTCCACGACCCTCC+TGG 0.450343 3:+93214164 MsG0380017196.01.T01:CDS
GCTAAAGAGCATGGGTTTGT+GGG 0.452071 3:+93215060 MsG0380017196.01.T01:CDS
TTGTGGATCTTATGTTTGGA+GGG 0.457136 3:+93215010 MsG0380017196.01.T01:CDS
TGTACTATTGATGTTGTACT+TGG 0.458608 3:+93215252 MsG0380017196.01.T01:three_prime_UTR
TCGGAGTAACCGGCATCGTC+GGG 0.463401 3:+93214074 MsG0380017196.01.T01:CDS
GCATTTGTTTATGTTTGTAA+AGG 0.465553 3:+93215299 MsG0380017196.01.T01:three_prime_UTR
GAAGGATAAGGGTCCTGTTT+GGG 0.466201 3:+93214924 MsG0380017196.01.T01:CDS
CACGGGTATGGGATGGGTAA+CGG 0.466324 3:-93212157 None:intergenic
AGTTTGGTTTGGGTTTCGTT+CGG 0.466991 3:-93214232 None:intergenic
CGAACCAAACCCAATTTGAC+GGG 0.468023 3:-93212236 None:intergenic
GTCGGAGTTGATGAAGGATA+AGG 0.470827 3:+93214912 MsG0380017196.01.T01:CDS
TGAGAACAGAGAGTTTGGTT+TGG 0.472334 3:-93214243 None:intergenic
CCAAGAATTCGCTCATAAGT+TGG 0.472720 3:+93215094 MsG0380017196.01.T01:CDS
AGTGACACGTGGCGGAGATT+CGG 0.478832 3:-93214382 None:intergenic
ATACCCAAACCCAGTCAAAA+CGG 0.479990 3:+93212207 MsG0380017196.01.T01:CDS
AGTTTGGGATTGAGGAGTAT+GGG 0.483456 3:+93214860 MsG0380017196.01.T01:CDS
CAGCCATGAGCCACCGTTCA+CGG 0.485632 3:+93214459 MsG0380017196.01.T01:CDS
CGATTTCAAAACACGGGTAT+GGG 0.491694 3:-93212168 None:intergenic
CCGAACCAAACCCAATTTGA+CGG 0.493095 3:-93212237 None:intergenic
GAAGTTGTCGGAGTTGATGA+AGG 0.493606 3:+93214906 MsG0380017196.01.T01:CDS
CCAGGAGGGTCGTGGACGAC+GGG 0.493720 3:-93214164 None:intergenic
TAGGACCGTTTGATCTGATC+GGG 0.498893 3:+93214428 MsG0380017196.01.T01:CDS
AGGTCCTCGTTTGAAGTTGT+CGG 0.499943 3:+93214894 MsG0380017196.01.T01:CDS
TGTGGATCTTATGTTTGGAG+GGG 0.501338 3:+93215011 MsG0380017196.01.T01:CDS
ATCGGAGTAACCGGCATCGT+CGG 0.502240 3:+93214073 MsG0380017196.01.T01:CDS
GATCTTATGTTTGGAGGGGA+AGG 0.504531 3:+93215015 MsG0380017196.01.T01:CDS
ATGAATAAGGCTAAAGAGCA+TGG 0.506656 3:+93215051 MsG0380017196.01.T01:CDS
TCCCAAGCTCCCCTTGTACC+AGG 0.511486 3:-93214691 None:intergenic
TCCAGGAGGGTCGTGGACGA+CGG 0.513929 3:-93214165 None:intergenic
GATGTATTCGATTGGATGAT+CGG 0.514685 3:-93214191 None:intergenic
CAAATTGGGTTTGGTTCGGG+CGG 0.518545 3:+93212241 MsG0380017196.01.T01:CDS
CTAGGACCGTTTGATCTGAT+CGG 0.519088 3:+93214427 MsG0380017196.01.T01:CDS
CCTCCGTGAACGGTGGCTCA+TGG 0.522365 3:-93214462 None:intergenic
TCGGCGTTCCAGGAGGGTCG+TGG 0.523858 3:-93214172 None:intergenic
TTCAAAACACGGGTATGGGA+TGG 0.526220 3:-93212164 None:intergenic
AAGGCTGTTCCCGACGATGC+CGG 0.528807 3:-93214083 None:intergenic
CCTACGCTCTGGAAGGTTGG+CGG 0.531495 3:-93214043 None:intergenic
ATCTTCCCGATCAGATCAAA+CGG 0.531847 3:-93214433 None:intergenic
AGCTTGGGAGTCTTATTCTG+TGG 0.533484 3:+93214705 MsG0380017196.01.T01:CDS
CCATCTACCGCCTGGTGTGT+CGG 0.536576 3:-93214125 None:intergenic
TCGGAGTTGATGAAGGATAA+GGG 0.543471 3:+93214913 MsG0380017196.01.T01:CDS
TCAAAACACGGGTATGGGAT+GGG 0.547234 3:-93212163 None:intergenic
CGATGATTAGTCCTACGCTC+TGG 0.550051 3:-93214054 None:intergenic
GAAGCGTTTAATTGTAGCAA+TGG 0.550117 3:+93214793 MsG0380017196.01.T01:CDS
TAGACTTTCCATCTACCGCC+TGG 0.550430 3:-93214133 None:intergenic
TTATTCTGTGGCTTCTGATG+CGG 0.552584 3:+93214717 MsG0380017196.01.T01:CDS
AAATTGGGTTTGGTTCGGGC+GGG 0.553301 3:+93212242 MsG0380017196.01.T01:CDS
CGCGGTAAATCCTCCGTGAA+CGG 0.555864 3:-93214472 None:intergenic
TCGCATTGGATGTATTCGAT+TGG 0.556553 3:-93214199 None:intergenic
AGTCCTACGCTCTGGAAGGT+TGG 0.556698 3:-93214046 None:intergenic
GGTTTGGGTTTCGTTCGGAT+CGG 0.557553 3:-93214227 None:intergenic
GCAACATATTTGGGCTGCAG+TGG 0.558473 3:+93214753 MsG0380017196.01.T01:CDS
TAGATGGAAACAACTCTGGA+AGG 0.559013 3:+93214825 MsG0380017196.01.T01:CDS
GGCGGTAGATGGAAAGTCTA+CGG 0.562328 3:+93214136 MsG0380017196.01.T01:CDS
GCTGCAATTTGCAAGCATGA+AGG 0.565387 3:+93214652 MsG0380017196.01.T01:CDS
CACGTGTCACTTCAGACCGG+TGG 0.569225 3:+93214394 MsG0380017196.01.T01:CDS
ATCTTATGTTTGGAGGGGAA+GGG 0.573215 3:+93215016 MsG0380017196.01.T01:CDS
TTGATGAGGTTGGTGAATGG+TGG 0.574318 3:+93214986 MsG0380017196.01.T01:CDS
CTACCGCTAGCCGACACACC+AGG 0.582134 3:+93214115 MsG0380017196.01.T01:CDS
GTTGAAATTTCCTGGTACAA+GGG 0.585567 3:+93214681 MsG0380017196.01.T01:CDS
GCTACGAAGATTGATGAGGT+TGG 0.585845 3:+93214976 MsG0380017196.01.T01:CDS
TCGGATCGGTGATGTCGCAT+TGG 0.588185 3:-93214213 None:intergenic
CCGCCTGGTGTGTCGGCTAG+CGG 0.589006 3:-93214118 None:intergenic
TTGAAATTTCCTGGTACAAG+GGG 0.589727 3:+93214682 MsG0380017196.01.T01:CDS
GAAAATCCAAATATAACTTG+AGG 0.595076 3:-93214586 None:intergenic
AAAAGAAAGAGGGTTTGAGT+TGG 0.596081 3:+93214551 MsG0380017196.01.T01:CDS
ACCAAATTTCTATTACACTC+AGG 0.603588 3:+93214504 MsG0380017196.01.T01:CDS
CTTGTACCAGGAAATTTCAA+CGG 0.604831 3:-93214679 None:intergenic
TCCTAGGTAGTGTTTCCCAC+CGG 0.606577 3:-93214410 None:intergenic
GTACTATTGATGTTGTACTT+GGG 0.606622 3:+93215253 MsG0380017196.01.T01:three_prime_UTR
GATTAGTCCTACGCTCTGGA+AGG 0.617341 3:-93214050 None:intergenic
GAGTATGGGTTTGACGAGGA+AGG 0.617693 3:+93214874 MsG0380017196.01.T01:CDS
TGAATAAGGCTAAAGAGCAT+GGG 0.619848 3:+93215052 MsG0380017196.01.T01:CDS
TTTCCCCGATTTCAAAACAC+GGG 0.621611 3:-93212174 None:intergenic
AGATTGATGAGGTTGGTGAA+TGG 0.623058 3:+93214983 MsG0380017196.01.T01:CDS
ACGTGTCACTTCAGACCGGT+GGG 0.638573 3:+93214395 MsG0380017196.01.T01:CDS
TGGATGATCGGCGTTCCAGG+AGG 0.643989 3:-93214179 None:intergenic
CACCGGTCTGAAGTGACACG+TGG 0.646129 3:-93214393 None:intergenic
CCGCCAACCTTCCAGAGCGT+AGG 0.646430 3:+93214043 MsG0380017196.01.T01:CDS
GGATGATCGGCGTTCCAGGA+GGG 0.651906 3:-93214178 None:intergenic
CGCCACGTGTCACTTCAGAC+CGG 0.657093 3:+93214391 MsG0380017196.01.T01:CDS
TGAGGAGTATGGGTTTGACG+AGG 0.658031 3:+93214870 MsG0380017196.01.T01:CDS
CAGAGCGTAGGACTAATCAT+CGG 0.671869 3:+93214055 MsG0380017196.01.T01:CDS
CGAAGCTACGAAGATTGATG+AGG 0.672599 3:+93214972 MsG0380017196.01.T01:CDS
ACCCAAACCCAGTCAAAACG+GGG 0.672970 3:+93212209 MsG0380017196.01.T01:CDS
CAACAACATAATGATAAACG+GGG 0.673627 3:-93215211 None:intergenic
GGTAAATCCTCCGTGAACGG+TGG 0.677570 3:-93214469 None:intergenic
GTTACGCAACGTTCTCACCG+CGG 0.679163 3:+93214345 MsG0380017196.01.T01:CDS
AAATTTGGTGCATCCAAACG+CGG 0.692396 3:-93214490 None:intergenic
CTAGCGGTAGAATTTCGGCA+AGG 0.698201 3:-93214102 None:intergenic
AACTCCGACAACTTCAAACG+AGG 0.699745 3:-93214898 None:intergenic
CGGTCTGAAGTGACACGTGG+CGG 0.700992 3:-93214390 None:intergenic
TGTTTGGGATGAGATTGTGA+AGG 0.709911 3:+93214939 MsG0380017196.01.T01:CDS
ACCGGTGGGAAACACTACCT+AGG 0.717978 3:+93214409 MsG0380017196.01.T01:CDS
CGGTGCGTTTGGGATAACCG+CGG 0.720388 3:-93214362 None:intergenic
CCATGAGCCACCGTTCACGG+AGG 0.753866 3:+93214462 MsG0380017196.01.T01:CDS
CCGCTAGCCGACACACCAGG+CGG 0.775930 3:+93214118 MsG0380017196.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATACAAAAAAATAAATA+CGG + Chr3:93212305-93212324 MsG0380017196.01.T01:intron 10.0%
!! GTTTATTAGTAATAAATAAA+GGG - Chr3:93213979-93213998 None:intergenic 10.0%
!! TGTTTATTAGTAATAAATAA+AGG - Chr3:93213980-93213999 None:intergenic 10.0%
!!! TTAAAATTTTTATACATTGA+AGG - Chr3:93212881-93212900 None:intergenic 10.0%
!! AATATTCTGATCATTTAAAT+AGG + Chr3:93212551-93212570 MsG0380017196.01.T01:intron 15.0%
!! TAACAAAAAAAAATTTGTGA+AGG + Chr3:93213598-93213617 MsG0380017196.01.T01:intron 15.0%
!! TGTATATTAGTAGAAAAATA+TGG + Chr3:93213511-93213530 MsG0380017196.01.T01:intron 15.0%
!!! AAAATTACACATTTTCAAAT+GGG + Chr3:93213551-93213570 MsG0380017196.01.T01:intron 15.0%
!!! TAATGAAGTATTTTAATGTA+GGG - Chr3:93213046-93213065 None:intergenic 15.0%
!!! TTAATGAAGTATTTTAATGT+AGG - Chr3:93213047-93213066 None:intergenic 15.0%
!! CAATGTATAAAAATATGCAA+AGG + Chr3:93212984-93213003 MsG0380017196.01.T01:intron 20.0%
!! TCAATACAATACAATACAAA+TGG - Chr3:93213864-93213883 None:intergenic 20.0%
!! TTAAGCTCAAAATTATGTAT+TGG - Chr3:93213389-93213408 None:intergenic 20.0%
!!! CAAAATTACACATTTTCAAA+TGG + Chr3:93213550-93213569 MsG0380017196.01.T01:intron 20.0%
!!! TTATGCGTTTTTTTACAATT+CGG - Chr3:93212529-93212548 None:intergenic 20.0%
!!! TTTTTGTATTTGTCAATGAT+AGG - Chr3:93212297-93212316 None:intergenic 20.0%
! AAATATGGTCAAAGTAAGTT+AGG + Chr3:93213526-93213545 MsG0380017196.01.T01:intron 25.0%
! ACAACAACATAATGATAAAC+GGG - Chr3:93215215-93215234 None:intergenic 25.0%
! CACAACAACATAATGATAAA+CGG - Chr3:93215216-93215235 None:intergenic 25.0%
! CTATTCTATTGGATAATACT+TGG + Chr3:93213253-93213272 MsG0380017196.01.T01:intron 25.0%
! CTTCTTTCAAAAGAAAAATG+GGG + Chr3:93212809-93212828 MsG0380017196.01.T01:intron 25.0%
! GAAAATCCAAATATAACTTG+AGG - Chr3:93214589-93214608 None:intergenic 25.0%
! GAAGAAACTAAAAAGAAAGA+GGG + Chr3:93214541-93214560 MsG0380017196.01.T01:CDS 25.0%
! GCATTTGTTTATGTTTGTAA+AGG + Chr3:93215299-93215318 MsG0380017196.01.T01:three_prime_UTR 25.0%
! GCTTCTTTCAAAAGAAAAAT+GGG + Chr3:93212808-93212827 MsG0380017196.01.T01:intron 25.0%
! TGAAGAAACTAAAAAGAAAG+AGG + Chr3:93214540-93214559 MsG0380017196.01.T01:CDS 25.0%
! TGCTTCTTTCAAAAGAAAAA+TGG + Chr3:93212807-93212826 MsG0380017196.01.T01:intron 25.0%
!! ATCTAAGATGACTATTCTAT+TGG + Chr3:93213242-93213261 MsG0380017196.01.T01:intron 25.0%
!! CATTTTTGTACTGAATTGTT+CGG - Chr3:93212410-93212429 None:intergenic 25.0%
!!! CATGAAGACATTTTAATGTA+GGG - Chr3:93212942-93212961 None:intergenic 25.0%
!!! TCATGAAGACATTTTAATGT+AGG - Chr3:93212943-93212962 None:intergenic 25.0%
!!! TGTATATTTTGTTGTCTTTG+AGG - Chr3:93213194-93213213 None:intergenic 25.0%
AAATACAAGACTAGGTTAAG+GGG + Chr3:93212350-93212369 MsG0380017196.01.T01:intron 30.0%
ACAAGATTCATCAAGCTATA+AGG - Chr3:93214613-93214632 None:intergenic 30.0%
ACCAAATTTCTATTACACTC+AGG + Chr3:93214504-93214523 MsG0380017196.01.T01:CDS 30.0%
ACTTACACAAACATCATTCA+TGG - Chr3:93215150-93215169 None:intergenic 30.0%
AGAAATACAAGACTAGGTTA+AGG + Chr3:93212348-93212367 MsG0380017196.01.T01:intron 30.0%
AGAGAAAGAAATACAAGACT+AGG + Chr3:93212342-93212361 MsG0380017196.01.T01:intron 30.0%
ATAATACTTGGATGACATTG+TGG + Chr3:93213265-93213284 MsG0380017196.01.T01:intron 30.0%
ATAGGCAGAATATTCTTCTT+TGG - Chr3:93213704-93213723 None:intergenic 30.0%
ATATGTCGCATCAATGTTAT+AGG - Chr3:93213722-93213741 None:intergenic 30.0%
CAACAACATAATGATAAACG+GGG - Chr3:93215214-93215233 None:intergenic 30.0%
CATAGACCTCAAGTTATATT+TGG + Chr3:93214580-93214599 MsG0380017196.01.T01:CDS 30.0%
CGAACAATTCAGTACAAAAA+TGG + Chr3:93212408-93212427 MsG0380017196.01.T01:intron 30.0%
GAAATACAAGACTAGGTTAA+GGG + Chr3:93212349-93212368 MsG0380017196.01.T01:intron 30.0%
GTACTATTGATGTTGTACTT+GGG + Chr3:93215253-93215272 MsG0380017196.01.T01:three_prime_UTR 30.0%
TAGGCAGAATATTCTTCTTT+GGG - Chr3:93213703-93213722 None:intergenic 30.0%
TATAGCTTGATGAATCTTGT+TGG + Chr3:93214613-93214632 MsG0380017196.01.T01:CDS 30.0%
TCCTGAGTGTAATAGAAATT+TGG - Chr3:93214508-93214527 None:intergenic 30.0%
TGTACTATTGATGTTGTACT+TGG + Chr3:93215252-93215271 MsG0380017196.01.T01:three_prime_UTR 30.0%
TTCAACTGTGTCAAGTATTA+AGG - Chr3:93213353-93213372 None:intergenic 30.0%
TTGTGGATTCAGTTAGTAAT+TGG - Chr3:93212672-93212691 None:intergenic 30.0%
TTTGTACACTTGTAACATTG+TGG - Chr3:93213316-93213335 None:intergenic 30.0%
! GATACTTTGAAGATAGTTGT+TGG - Chr3:93212615-93212634 None:intergenic 30.0%
! TTTTTAGATGGAAACAACTC+TGG + Chr3:93214821-93214840 MsG0380017196.01.T01:CDS 30.0%
!! TTTTGCTTTTGTGGTTTACT+AGG - Chr3:93212387-93212406 None:intergenic 30.0%
!!! AATGTAGGGACATTTTTTTG+TGG - Chr3:93213032-93213051 None:intergenic 30.0%
AAAAGAAAGAGGGTTTGAGT+TGG + Chr3:93214551-93214570 MsG0380017196.01.T01:CDS 35.0%
AGATTTGAGAATGAGAGAGA+TGG - Chr3:93213950-93213969 None:intergenic 35.0%
AGGCAGAATATTCTTCTTTG+GGG - Chr3:93213702-93213721 None:intergenic 35.0%
AGTTGAGAAACGTTGCTTAT+GGG - Chr3:93213812-93213831 None:intergenic 35.0%
ATGAATAAGGCTAAAGAGCA+TGG + Chr3:93215051-93215070 MsG0380017196.01.T01:CDS 35.0%
CTGTGTCAAGTATTAAGGAA+CGG - Chr3:93213348-93213367 None:intergenic 35.0%
CTTGTACCAGGAAATTTCAA+CGG - Chr3:93214682-93214701 None:intergenic 35.0%
GAAAACCACGTGTGATATTA+CGG + Chr3:93213629-93213648 MsG0380017196.01.T01:intron 35.0%
GACTGTAGATAGCATGAATA+AGG + Chr3:93215038-93215057 MsG0380017196.01.T01:CDS 35.0%
GATGTATTCGATTGGATGAT+CGG - Chr3:93214194-93214213 None:intergenic 35.0%
GTATTTGTCAATGATAGGCA+TGG - Chr3:93212292-93212311 None:intergenic 35.0%
GTTGAAATTTCCTGGTACAA+GGG + Chr3:93214681-93214700 MsG0380017196.01.T01:CDS 35.0%
TAAAAATATGCAAAGGTCCG+AGG + Chr3:93212991-93213010 MsG0380017196.01.T01:intron 35.0%
TACAATACAAATGGACAACG+AGG - Chr3:93213855-93213874 None:intergenic 35.0%
TACACTTGTAACATTGTGGT+TGG - Chr3:93213312-93213331 None:intergenic 35.0%
TGACTGACGATGAATTTAGA+CGG - Chr3:93213746-93213765 None:intergenic 35.0%
TTCAAATGGGTCATCTATTG+CGG + Chr3:93213564-93213583 MsG0380017196.01.T01:intron 35.0%
TTGAAATTTCCTGGTACAAG+GGG + Chr3:93214682-93214701 MsG0380017196.01.T01:CDS 35.0%
TTGTGGATCTTATGTTTGGA+GGG + Chr3:93215010-93215029 MsG0380017196.01.T01:CDS 35.0%
TTTGTGGATCTTATGTTTGG+AGG + Chr3:93215009-93215028 MsG0380017196.01.T01:CDS 35.0%
! GAAGCGTTTAATTGTAGCAA+TGG + Chr3:93214793-93214812 MsG0380017196.01.T01:CDS 35.0%
! GCAATAAATTTTATCCGTCG+TGG - Chr3:93212790-93212809 None:intergenic 35.0%
! GCCATTAACTTCACAGTTTT+CGG - Chr3:93214320-93214339 None:intergenic 35.0%
! TCTTTGGGGGAATAGAATAT+GGG - Chr3:93213688-93213707 None:intergenic 35.0%
! TGAATAAGGCTAAAGAGCAT+GGG + Chr3:93215052-93215071 MsG0380017196.01.T01:CDS 35.0%
! TGGTTTGTGGATCTTATGTT+TGG + Chr3:93215006-93215025 MsG0380017196.01.T01:CDS 35.0%
! TTCTTTGGGGGAATAGAATA+TGG - Chr3:93213689-93213708 None:intergenic 35.0%
! TTTTCCCCGATTTCAAAACA+CGG - Chr3:93212178-93212197 None:intergenic 35.0%
!! ATTGTTCGGTTTTGCTTTTG+TGG - Chr3:93212396-93212415 None:intergenic 35.0%
!!! GCAATGGTGATGTTTTTAGA+TGG + Chr3:93214809-93214828 MsG0380017196.01.T01:CDS 35.0%
AAAACCCGTCAAATTGGGTT+TGG + Chr3:93212232-93212251 MsG0380017196.01.T01:CDS 40.0%
AACGCTTCGTTCTTAGCATA+AGG - Chr3:93214781-93214800 None:intergenic 40.0%
AATACAAATGGACAACGAGG+AGG - Chr3:93213852-93213871 None:intergenic 40.0%
AGCAACGTTTCTCAACTCTT+TGG + Chr3:93213815-93213834 MsG0380017196.01.T01:intron 40.0%
ATACCCAAACCCAGTCAAAA+CGG + Chr3:93212207-93212226 MsG0380017196.01.T01:CDS 40.0%
ATCTTATGTTTGGAGGGGAA+GGG + Chr3:93215016-93215035 MsG0380017196.01.T01:CDS 40.0%
ATCTTCCCGATCAGATCAAA+CGG - Chr3:93214436-93214455 None:intergenic 40.0%
ATTGTCTGCCAACACAGAAA+CGG + Chr3:93212581-93212600 MsG0380017196.01.T01:intron 40.0%
CACACATATTCTACGTCTCT+TGG + Chr3:93214275-93214294 MsG0380017196.01.T01:CDS 40.0%
CCAACTTATGAGCGAATTCT+TGG - Chr3:93215097-93215116 None:intergenic 40.0%
CCAAGAATTCGCTCATAAGT+TGG + Chr3:93215094-93215113 MsG0380017196.01.T01:CDS 40.0%
CGATTTCAAAACACGGGTAT+GGG - Chr3:93212171-93212190 None:intergenic 40.0%
CGTTGAAATTTCCTGGTACA+AGG + Chr3:93214680-93214699 MsG0380017196.01.T01:CDS 40.0%
CGTTTGTTCATCCCTTGATT+TGG - Chr3:93212727-93212746 None:intergenic 40.0%
CTTCATGAGCTTAACTCAGT+TGG + Chr3:93212955-93212974 MsG0380017196.01.T01:intron 40.0%
GACTGACGATGAATTTAGAC+GGG - Chr3:93213745-93213764 None:intergenic 40.0%
GAGTTGAGAAACGTTGCTTA+TGG - Chr3:93213813-93213832 None:intergenic 40.0%
GATCGCAGAGCAACATATTT+GGG + Chr3:93214744-93214763 MsG0380017196.01.T01:CDS 40.0%
GCCGAAAACTGTGAAGTTAA+TGG + Chr3:93214316-93214335 MsG0380017196.01.T01:CDS 40.0%
GGCAGAATATTCTTCTTTGG+GGG - Chr3:93213701-93213720 None:intergenic 40.0%
GTCAAGTATTAAGGAACGGA+GGG - Chr3:93213344-93213363 None:intergenic 40.0%
TACTTGGATGACATTGTGGT+TGG + Chr3:93213269-93213288 MsG0380017196.01.T01:intron 40.0%
TAGATGGAAACAACTCTGGA+AGG + Chr3:93214825-93214844 MsG0380017196.01.T01:CDS 40.0%
TCAAATGGGTCATCTATTGC+GGG + Chr3:93213565-93213584 MsG0380017196.01.T01:intron 40.0%
TCAAGATCACTACGACTTTG+TGG - Chr3:93212689-93212708 None:intergenic 40.0%
TCAGTCGTAGTCCAAATCAA+GGG + Chr3:93212713-93212732 MsG0380017196.01.T01:intron 40.0%
TCGCATTGGATGTATTCGAT+TGG - Chr3:93214202-93214221 None:intergenic 40.0%
TGAATCTGAAAACCATGAGC+TGG + Chr3:93213888-93213907 MsG0380017196.01.T01:intron 40.0%
TGAGAACAGAGAGTTTGGTT+TGG - Chr3:93214246-93214265 None:intergenic 40.0%
TGATCGCAGAGCAACATATT+TGG + Chr3:93214743-93214762 MsG0380017196.01.T01:CDS 40.0%
TGTCAAGTATTAAGGAACGG+AGG - Chr3:93213345-93213364 None:intergenic 40.0%
TGTGGATCTTATGTTTGGAG+GGG + Chr3:93215011-93215030 MsG0380017196.01.T01:CDS 40.0%
TTATTCTGTGGCTTCTGATG+CGG + Chr3:93214717-93214736 MsG0380017196.01.T01:CDS 40.0%
TTCACAATCTCATCCCAAAC+AGG - Chr3:93214940-93214959 None:intergenic 40.0%
TTCAGTCGTAGTCCAAATCA+AGG + Chr3:93212712-93212731 MsG0380017196.01.T01:intron 40.0%
TTTCCCCGATTTCAAAACAC+GGG - Chr3:93212177-93212196 None:intergenic 40.0%
! AACTTCACAGTTTTCGGCTT+CGG - Chr3:93214314-93214333 None:intergenic 40.0%
! AGATTGTTGTTCCCCTATGT+GGG - Chr3:93212485-93212504 None:intergenic 40.0%
! AGTTTGGGATTGAGGAGTAT+GGG + Chr3:93214860-93214879 MsG0380017196.01.T01:CDS 40.0%
! ATTGGTTGCTTTGACTCGAA+AGG - Chr3:93212654-93212673 None:intergenic 40.0%
! CTTGCATCGTTGGTAGAAAA+TGG - Chr3:93212761-93212780 None:intergenic 40.0%
! CTTTTGTGGTTTACTAGGTC+AGG - Chr3:93212382-93212401 None:intergenic 40.0%
! GAGAACAGAGAGTTTGGTTT+GGG - Chr3:93214245-93214264 None:intergenic 40.0%
! TAGATTGTTGTTCCCCTATG+TGG - Chr3:93212486-93212505 None:intergenic 40.0%
! TGAGCTTAACTCAGTTGGTA+TGG + Chr3:93212960-93212979 MsG0380017196.01.T01:intron 40.0%
! TGTTTGGGATGAGATTGTGA+AGG + Chr3:93214939-93214958 MsG0380017196.01.T01:CDS 40.0%
! TTGACTCGAAAGGGAGTTTA+TGG - Chr3:93212644-93212663 None:intergenic 40.0%
! TTGGTTGCTTTGACTCGAAA+GGG - Chr3:93212653-93212672 None:intergenic 40.0%
!! AAATTTGGTGCATCCAAACG+CGG - Chr3:93214493-93214512 None:intergenic 40.0%
!! AAGGTTTTGGCAGAACAGTT+TGG + Chr3:93214844-93214863 MsG0380017196.01.T01:CDS 40.0%
!! AGATTGATGAGGTTGGTGAA+TGG + Chr3:93214983-93215002 MsG0380017196.01.T01:CDS 40.0%
!! AGGTTTTGGCAGAACAGTTT+GGG + Chr3:93214845-93214864 MsG0380017196.01.T01:CDS 40.0%
!! AGTTTGGTTTGGGTTTCGTT+CGG - Chr3:93214235-93214254 None:intergenic 40.0%
!! GAAACAACTCTGGAAGGTTT+TGG + Chr3:93214831-93214850 MsG0380017196.01.T01:CDS 40.0%
!! GTTCGTGGTAATGGTTGTTT+AGG - Chr3:93212451-93212470 None:intergenic 40.0%
!! TCGGAGTTGATGAAGGATAA+GGG + Chr3:93214913-93214932 MsG0380017196.01.T01:CDS 40.0%
!! TTTTGACTGGGTTTGGGTAT+GGG - Chr3:93212207-93212226 None:intergenic 40.0%
!!! ACATTTTTTTGTGGTGGTCG+GGG - Chr3:93213023-93213042 None:intergenic 40.0%
!!! ATACCCGTGTTTTGAAATCG+GGG + Chr3:93212171-93212190 MsG0380017196.01.T01:CDS 40.0%
!!! CATACCCGTGTTTTGAAATC+GGG + Chr3:93212170-93212189 MsG0380017196.01.T01:CDS 40.0%
!!! CCATACCCGTGTTTTGAAAT+CGG + Chr3:93212169-93212188 MsG0380017196.01.T01:CDS 40.0%
!!! GACATTTTTTTGTGGTGGTC+GGG - Chr3:93213024-93213043 None:intergenic 40.0%
!!! GGACATTTTTTTGTGGTGGT+CGG - Chr3:93213025-93213044 None:intergenic 40.0%
!!! GTAGGGACATTTTTTTGTGG+TGG - Chr3:93213029-93213048 None:intergenic 40.0%
AACTCCGACAACTTCAAACG+AGG - Chr3:93214901-93214920 None:intergenic 45.0%
AACTTGAGCCGTTTCTGTGT+TGG - Chr3:93212592-93212611 None:intergenic 45.0%
AATTCATCGTCAGTCACGCT+TGG + Chr3:93213750-93213769 MsG0380017196.01.T01:intron 45.0%
ACCAACCGTAATATCACACG+TGG - Chr3:93213637-93213656 None:intergenic 45.0%
ACCACGTGTGATATTACGGT+TGG + Chr3:93213633-93213652 MsG0380017196.01.T01:intron 45.0%
ATCTGAAAACCATGAGCTGG+TGG + Chr3:93213891-93213910 MsG0380017196.01.T01:intron 45.0%
CAACAATCTAGCGAACGTAG+TGG + Chr3:93212496-93212515 MsG0380017196.01.T01:intron 45.0%
CAAGACTAGGTTAAGGGGAA+AGG + Chr3:93212355-93212374 MsG0380017196.01.T01:intron 45.0%
CAGAGCGTAGGACTAATCAT+CGG + Chr3:93214055-93214074 MsG0380017196.01.T01:CDS 45.0%
CCGAACCAAACCCAATTTGA+CGG - Chr3:93212240-93212259 None:intergenic 45.0%
CCGATTTCAAAACACGGGTA+TGG - Chr3:93212172-93212191 None:intergenic 45.0%
CGAACCAAACCCAATTTGAC+GGG - Chr3:93212239-93212258 None:intergenic 45.0%
CGAAGCTACGAAGATTGATG+AGG + Chr3:93214972-93214991 MsG0380017196.01.T01:CDS 45.0%
CTAGGACCGTTTGATCTGAT+CGG + Chr3:93214427-93214446 MsG0380017196.01.T01:CDS 45.0%
GAAGGATAAGGGTCCTGTTT+GGG + Chr3:93214924-93214943 MsG0380017196.01.T01:CDS 45.0%
GATCTTATGTTTGGAGGGGA+AGG + Chr3:93215015-93215034 MsG0380017196.01.T01:CDS 45.0%
GCTACGAAGATTGATGAGGT+TGG + Chr3:93214976-93214995 MsG0380017196.01.T01:CDS 45.0%
GCTGCAATTTGCAAGCATGA+AGG + Chr3:93214652-93214671 MsG0380017196.01.T01:CDS 45.0%
GGACTAATCATCGGAGTAAC+CGG + Chr3:93214064-93214083 MsG0380017196.01.T01:CDS 45.0%
GGTGTTCCGTTGAAATTTCC+TGG + Chr3:93214673-93214692 MsG0380017196.01.T01:CDS 45.0%
GTCAGTGAGAACAGAGAGTT+TGG - Chr3:93214251-93214270 None:intergenic 45.0%
TACCCAAACCCAGTCAAAAC+GGG + Chr3:93212208-93212227 MsG0380017196.01.T01:CDS 45.0%
TAGGACCGTTTGATCTGATC+GGG + Chr3:93214428-93214447 MsG0380017196.01.T01:CDS 45.0%
TCAAAACACGGGTATGGGAT+GGG - Chr3:93212166-93212185 None:intergenic 45.0%
TGAAGGATAAGGGTCCTGTT+TGG + Chr3:93214923-93214942 MsG0380017196.01.T01:CDS 45.0%
TTCAAAACACGGGTATGGGA+TGG - Chr3:93212167-93212186 None:intergenic 45.0%
! AGGTCCTCGTTTGAAGTTGT+CGG + Chr3:93214894-93214913 MsG0380017196.01.T01:CDS 45.0%
! CAGTTTGGGATTGAGGAGTA+TGG + Chr3:93214859-93214878 MsG0380017196.01.T01:CDS 45.0%
! CCGTCAAATTGGGTTTGGTT+CGG + Chr3:93212237-93212256 MsG0380017196.01.T01:CDS 45.0%
! CGTCAAATTGGGTTTGGTTC+GGG + Chr3:93212238-93212257 MsG0380017196.01.T01:CDS 45.0%
! GCTAAAGAGCATGGGTTTGT+GGG + Chr3:93215060-93215079 MsG0380017196.01.T01:CDS 45.0%
!! AGCTTGGGAGTCTTATTCTG+TGG + Chr3:93214705-93214724 MsG0380017196.01.T01:CDS 45.0%
!! GAAGTTGTCGGAGTTGATGA+AGG + Chr3:93214906-93214925 MsG0380017196.01.T01:CDS 45.0%
!! GACATTGTGGTTGGTGACAT+TGG + Chr3:93213278-93213297 MsG0380017196.01.T01:intron 45.0%
!! GTCGGAGTTGATGAAGGATA+AGG + Chr3:93214912-93214931 MsG0380017196.01.T01:CDS 45.0%
!! TGAGAGAGATGGTGTTACCT+TGG - Chr3:93213939-93213958 None:intergenic 45.0%
!! TTGATGAGGTTGGTGAATGG+TGG + Chr3:93214986-93215005 MsG0380017196.01.T01:CDS 45.0%
!!! GTTTTGACTGGGTTTGGGTA+TGG - Chr3:93212208-93212227 None:intergenic 45.0%
AATCCAGCGAACCCACATAG+GGG + Chr3:93212471-93212490 MsG0380017196.01.T01:intron 50.0%
ACAATCCAGCGAACCCACAT+AGG + Chr3:93212469-93212488 MsG0380017196.01.T01:intron 50.0%
ACCCAAACCCAGTCAAAACG+GGG + Chr3:93212209-93212228 MsG0380017196.01.T01:CDS 50.0%
ACGGGGAAAACCCGTCAAAT+TGG + Chr3:93212226-93212245 MsG0380017196.01.T01:CDS 50.0%
ATGGGTCATCTATTGCGGGA+CGG + Chr3:93213569-93213588 MsG0380017196.01.T01:intron 50.0%
CAATCCAGCGAACCCACATA+GGG + Chr3:93212470-93212489 MsG0380017196.01.T01:intron 50.0%
CGATCAGATCAAACGGTCCT+AGG - Chr3:93214429-93214448 None:intergenic 50.0%
CGCTGGATTGTTCGTGGTAA+TGG - Chr3:93212460-93212479 None:intergenic 50.0%
CGGGGAAAACCCGTCAAATT+GGG + Chr3:93212227-93212246 MsG0380017196.01.T01:CDS 50.0%
CTAGCGGTAGAATTTCGGCA+AGG - Chr3:93214105-93214124 None:intergenic 50.0%
GAGTATGGGTTTGACGAGGA+AGG + Chr3:93214874-93214893 MsG0380017196.01.T01:CDS 50.0%
GATGCAAGAAGCAACCACGA+CGG + Chr3:93212773-93212792 MsG0380017196.01.T01:intron 50.0%
GCAACATATTTGGGCTGCAG+TGG + Chr3:93214753-93214772 MsG0380017196.01.T01:CDS 50.0%
GGCGGTAGATGGAAAGTCTA+CGG + Chr3:93214136-93214155 MsG0380017196.01.T01:CDS 50.0%
GGGTAGCACTTGAGTGACAT+CGG - Chr3:93213668-93213687 None:intergenic 50.0%
GTCGGCTAGCGGTAGAATTT+CGG - Chr3:93214110-93214129 None:intergenic 50.0%
GTGGTTGCTTCTTGCATCGT+TGG - Chr3:93212771-93212790 None:intergenic 50.0%
TAGACTTTCCATCTACCGCC+TGG - Chr3:93214136-93214155 None:intergenic 50.0%
TCCTAGGTAGTGTTTCCCAC+CGG - Chr3:93214413-93214432 None:intergenic 50.0%
TGAAAACCATGAGCTGGTGG+TGG + Chr3:93213894-93213913 MsG0380017196.01.T01:intron 50.0%
! CGATGATTAGTCCTACGCTC+TGG - Chr3:93214057-93214076 None:intergenic 50.0%
! GATTAGTCCTACGCTCTGGA+AGG - Chr3:93214053-93214072 None:intergenic 50.0%
! GGCAGAACAGTTTGGGATTG+AGG + Chr3:93214852-93214871 MsG0380017196.01.T01:CDS 50.0%
! GGCTAAAGAGCATGGGTTTG+TGG + Chr3:93215059-93215078 MsG0380017196.01.T01:CDS 50.0%
! GGTTTGGGTTTCGTTCGGAT+CGG - Chr3:93214230-93214249 None:intergenic 50.0%
! TCACAGTTTTCGGCTTCGGA+GGG - Chr3:93214310-93214329 None:intergenic 50.0%
! TGAGGAGTATGGGTTTGACG+AGG + Chr3:93214870-93214889 MsG0380017196.01.T01:CDS 50.0%
! TTCACAGTTTTCGGCTTCGG+AGG - Chr3:93214311-93214330 None:intergenic 50.0%
!! AAATTGGGTTTGGTTCGGGC+GGG + Chr3:93212242-93212261 MsG0380017196.01.T01:CDS 50.0%
!! CAAATTGGGTTTGGTTCGGG+CGG + Chr3:93212241-93212260 MsG0380017196.01.T01:CDS 50.0%
!! GGGATGGGTAACGGGTATAT+AGG - Chr3:93212151-93212170 None:intergenic 50.0%
!! GGTTGGTGAATGGTGGTTTG+TGG + Chr3:93214993-93215012 MsG0380017196.01.T01:CDS 50.0%
!!! GGGTTTTCCCCGTTTTGACT+GGG - Chr3:93212219-93212238 None:intergenic 50.0%
!!! TCCCCGTTTTGACTGGGTTT+GGG - Chr3:93212213-93212232 None:intergenic 50.0%
!!! TTCCCCGTTTTGACTGGGTT+TGG - Chr3:93212214-93212233 None:intergenic 50.0%
ACCGGTGGGAAACACTACCT+AGG + Chr3:93214409-93214428 MsG0380017196.01.T01:CDS 55.0%
ACGGGTATGGGATGGGTAAC+GGG - Chr3:93212159-93212178 None:intergenic 55.0%
ATCGGAGTAACCGGCATCGT+CGG + Chr3:93214073-93214092 MsG0380017196.01.T01:CDS 55.0%
CACGGAGGATTTACCGCGTT+TGG + Chr3:93214477-93214496 MsG0380017196.01.T01:CDS 55.0%
CACGGGTATGGGATGGGTAA+CGG - Chr3:93212160-93212179 None:intergenic 55.0%
CGCGGTAAATCCTCCGTGAA+CGG - Chr3:93214475-93214494 None:intergenic 55.0%
GATTGGATGATCGGCGTTCC+AGG - Chr3:93214185-93214204 None:intergenic 55.0%
GGCAACAAAACCCATACCCG+CGG - Chr3:93212271-93212290 None:intergenic 55.0%
GGTAAATCCTCCGTGAACGG+TGG - Chr3:93214472-93214491 None:intergenic 55.0%
GTCATCTATTGCGGGACGGA+GGG + Chr3:93213573-93213592 MsG0380017196.01.T01:intron 55.0%
GTTACGCAACGTTCTCACCG+CGG + Chr3:93214345-93214364 MsG0380017196.01.T01:CDS 55.0%
TCCTGGTACAAGGGGAGCTT+GGG + Chr3:93214690-93214709 MsG0380017196.01.T01:CDS 55.0%
TCGGATCGGTGATGTCGCAT+TGG - Chr3:93214216-93214235 None:intergenic 55.0%
TGGGTTCGCTGGATTGTTCG+TGG - Chr3:93212466-93212485 None:intergenic 55.0%
TTCCTGGTACAAGGGGAGCT+TGG + Chr3:93214689-93214708 MsG0380017196.01.T01:CDS 55.0%
! AGTGACACGTGGCGGAGATT+CGG - Chr3:93214385-93214404 None:intergenic 55.0%
! AGTTTTCGGCTTCGGAGGGA+CGG - Chr3:93214306-93214325 None:intergenic 55.0%
!! ACGTGTCACTTCAGACCGGT+GGG + Chr3:93214395-93214414 MsG0380017196.01.T01:CDS 55.0%
!! AGTCCTACGCTCTGGAAGGT+TGG - Chr3:93214049-93214068 None:intergenic 55.0%
!! CGGGTTTTCCCCGTTTTGAC+TGG - Chr3:93212220-93212239 None:intergenic 55.0%
AAGGCTGTTCCCGACGATGC+CGG - Chr3:93214086-93214105 None:intergenic 60.0%
CAGCCATGAGCCACCGTTCA+CGG + Chr3:93214459-93214478 MsG0380017196.01.T01:CDS 60.0%
CCATCTACCGCCTGGTGTGT+CGG - Chr3:93214128-93214147 None:intergenic 60.0%
GGATGATCGGCGTTCCAGGA+GGG - Chr3:93214181-93214200 None:intergenic 60.0%
GGTCATCTATTGCGGGACGG+AGG + Chr3:93213572-93213591 MsG0380017196.01.T01:intron 60.0%
GTTCCCCTATGTGGGTTCGC+TGG - Chr3:93212477-93212496 None:intergenic 60.0%
TCCCAAGCTCCCCTTGTACC+AGG - Chr3:93214694-93214713 None:intergenic 60.0%
TCGGAGTAACCGGCATCGTC+GGG + Chr3:93214074-93214093 MsG0380017196.01.T01:CDS 60.0%
TGGATGATCGGCGTTCCAGG+AGG - Chr3:93214182-93214201 None:intergenic 60.0%
! CACCGGTCTGAAGTGACACG+TGG - Chr3:93214396-93214415 None:intergenic 60.0%
! CGGTCTGAAGTGACACGTGG+CGG - Chr3:93214393-93214412 None:intergenic 60.0%
! CGGTGCGTTTGGGATAACCG+CGG - Chr3:93214365-93214384 None:intergenic 60.0%
!! ACCATGAGCTGGTGGTGGTC+CGG + Chr3:93213899-93213918 MsG0380017196.01.T01:intron 60.0%
!! CACGTGTCACTTCAGACCGG+TGG + Chr3:93214394-93214413 MsG0380017196.01.T01:CDS 60.0%
!! CCTACGCTCTGGAAGGTTGG+CGG - Chr3:93214046-93214065 None:intergenic 60.0%
!! CGCCACGTGTCACTTCAGAC+CGG + Chr3:93214391-93214410 MsG0380017196.01.T01:CDS 60.0%
!! GGCGGAGATTCGGTGCGTTT+GGG - Chr3:93214375-93214394 None:intergenic 60.0%
!! TGGCGGAGATTCGGTGCGTT+TGG - Chr3:93214376-93214395 None:intergenic 60.0%
!! TGGTGGTGGTCCGGAGCAAT+CGG + Chr3:93213908-93213927 MsG0380017196.01.T01:intron 60.0%
CCATGAGCCACCGTTCACGG+AGG + Chr3:93214462-93214481 MsG0380017196.01.T01:CDS 65.0%
CCGACACACCAGGCGGTAGA+TGG + Chr3:93214125-93214144 MsG0380017196.01.T01:CDS 65.0%
CCGCCAACCTTCCAGAGCGT+AGG + Chr3:93214043-93214062 MsG0380017196.01.T01:CDS 65.0%
CCTCCGTGAACGGTGGCTCA+TGG - Chr3:93214465-93214484 None:intergenic 65.0%
CTACCGCTAGCCGACACACC+AGG + Chr3:93214115-93214134 MsG0380017196.01.T01:CDS 65.0%
GGTGGTCGGGGTTCGAACCT+CGG - Chr3:93213011-93213030 None:intergenic 65.0%
TCCAGGAGGGTCGTGGACGA+CGG - Chr3:93214168-93214187 None:intergenic 65.0%
TCCGGACCACCACCAGCTCA+TGG - Chr3:93213903-93213922 None:intergenic 65.0%
!! CTTGGCAGCGCCGATTGCTC+CGG - Chr3:93213921-93213940 None:intergenic 65.0%
CCAGGAGGGTCGTGGACGAC+GGG - Chr3:93214167-93214186 None:intergenic 70.0%
CCGCTAGCCGACACACCAGG+CGG + Chr3:93214118-93214137 MsG0380017196.01.T01:CDS 70.0%
CGGAGCAATCGGCGCTGCCA+AGG + Chr3:93213919-93213938 MsG0380017196.01.T01:intron 70.0%
TCGGCGTTCCAGGAGGGTCG+TGG - Chr3:93214175-93214194 None:intergenic 70.0%
!! CCGCCTGGTGTGTCGGCTAG+CGG - Chr3:93214121-93214140 None:intergenic 70.0%
!! TTGGTTCGGGCGGGCAACCG+CGG + Chr3:93212251-93212270 MsG0380017196.01.T01:CDS 70.0%
CCCGTCGTCCACGACCCTCC+TGG + Chr3:93214164-93214183 MsG0380017196.01.T01:CDS 75.0%
GGGCGGGCAACCGCGGGTAT+GGG + Chr3:93212258-93212277 MsG0380017196.01.T01:intron 75.0%
! TGGTTCGGGCGGGCAACCGC+GGG + Chr3:93212252-93212271 MsG0380017196.01.T01:CDS 75.0%
! CGGGCGGGCAACCGCGGGTA+TGG + Chr3:93212257-93212276 MsG0380017196.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 93212130 93215371 93212130 ID=MsG0380017196.01;Name=MsG0380017196.01
Chr3 mRNA 93212130 93215371 93212130 ID=MsG0380017196.01.T01;Parent=MsG0380017196.01;Name=MsG0380017196.01.T01;_AED=0.45;_eAED=0.51;_QI=0|0|0.5|1|1|1|2|219|425
Chr3 exon 93212130 93212273 93212130 ID=MsG0380017196.01.T01:exon:31050;Parent=MsG0380017196.01.T01
Chr3 exon 93214019 93215371 93214019 ID=MsG0380017196.01.T01:exon:31051;Parent=MsG0380017196.01.T01
Chr3 CDS 93212130 93212273 93212130 ID=MsG0380017196.01.T01:cds;Parent=MsG0380017196.01.T01
Chr3 CDS 93214019 93215152 93214019 ID=MsG0380017196.01.T01:cds;Parent=MsG0380017196.01.T01
Chr3 three_prime_UTR 93215153 93215371 93215153 ID=MsG0380017196.01.T01:three_prime_utr;Parent=MsG0380017196.01.T01
Gene Sequence

>MsG0380017196.01.T01

ATGGGTTCGGGGTGGGTACCTATATACCCGTTACCCATCCCATACCCGTGTTTTGAAATCGGGGAAAACACATACCCATACCCAAACCCAGTCAAAACGGGGAAAACCCGTCAAATTGGGTTTGGTTCGGGCGGGCAACCGCGGAAGAAATTTGATGAAGACGAAGCACCGCCAACCTTCCAGAGCGTAGGACTAATCATCGGAGTAACCGGCATCGTCGGGAACAGCCTTGCCGAAATTCTACCGCTAGCCGACACACCAGGCGGTAGATGGAAAGTCTACGGCGTTGCCCGTCGTCCACGACCCTCCTGGAACGCCGATCATCCAATCGAATACATCCAATGCGACATCACCGATCCGAACGAAACCCAAACCAAACTCTCTGTTCTCACTGACGTCACACACATATTCTACGTCTCTTGGACTAACCGTCCCTCCGAAGCCGAAAACTGTGAAGTTAATGGCGCAATGTTACGCAACGTTCTCACCGCGGTTATCCCAAACGCACCGAATCTCCGCCACGTGTCACTTCAGACCGGTGGGAAACACTACCTAGGACCGTTTGATCTGATCGGGAAGATTAACAGCCATGAGCCACCGTTCACGGAGGATTTACCGCGTTTGGATGCACCAAATTTCTATTACACTCAGGAAGATATTTTGTTTGAAGAAACTAAAAAGAAAGAGGGTTTGAGTTGGTCTGTTCATAGACCTCAAGTTATATTTGGATTTTCACCTTATAGCTTGATGAATCTTGTTGGTACACTTTGTGTTTACGCTGCAATTTGCAAGCATGAAGGTGTTCCGTTGAAATTTCCTGGTACAAGGGGAGCTTGGGAGTCTTATTCTGTGGCTTCTGATGCGGATTTGATCGCAGAGCAACATATTTGGGCTGCAGTGGATCCTTATGCTAAGAACGAAGCGTTTAATTGTAGCAATGGTGATGTTTTTAGATGGAAACAACTCTGGAAGGTTTTGGCAGAACAGTTTGGGATTGAGGAGTATGGGTTTGACGAGGAAGGTCCTCGTTTGAAGTTGTCGGAGTTGATGAAGGATAAGGGTCCTGTTTGGGATGAGATTGTGAAGGAGAATCAGCTCGAAGCTACGAAGATTGATGAGGTTGGTGAATGGTGGTTTGTGGATCTTATGTTTGGAGGGGAAGGGACTGTAGATAGCATGAATAAGGCTAAAGAGCATGGGTTTGTGGGATTTAGAAACACCAAGAATTCGCTCATAAGTTGGATAGATAAAACTAGAGCTTACAAGATTGTTCCATGA
Protein sequence

>MsG0380017196.01.T01

MGSGWVPIYPLPIPYPCFEIGENTYPYPNPVKTGKTRQIGFGSGGQPRKKFDEDEAPPTFQSVGLIIGVTGIVGNSLAEILPLADTPGGRWKVYGVARRPRPSWNADHPIEYIQCDITDPNETQTKLSVLTDVTHIFYVSWTNRPSEAENCEVNGAMLRNVLTAVIPNAPNLRHVSLQTGGKHYLGPFDLIGKINSHEPPFTEDLPRLDAPNFYYTQEDILFEETKKKEGLSWSVHRPQVIFGFSPYSLMNLVGTLCVYAAICKHEGVPLKFPGTRGAWESYSVASDADLIAEQHIWAAVDPYAKNEAFNCSNGDVFRWKQLWKVLAEQFGIEEYGFDEEGPRLKLSELMKDKGPVWDEIVKENQLEATKIDEVGEWWFVDLMFGGEGTVDSMNKAKEHGFVGFRNTKNSLISWIDKTRAYKIVP*