AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017241.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017241.01.T01 MTR_3g103510 67.883 137 14 2 2 108 43 179 2.73e-52 169
MsG0380017241.01.T01 MTR_3g103510 67.883 137 14 2 2 108 197 333 5.20e-51 169
MsG0380017241.01.T01 MTR_1g017270 60.584 137 24 2 2 108 202 338 3.50e-45 154
MsG0380017241.01.T01 MTR_1g017270 60.584 137 24 2 2 108 202 338 4.33e-45 154
MsG0380017241.01.T01 MTR_4g092640 57.971 138 27 2 2 108 202 339 1.57e-42 147
MsG0380017241.01.T01 MTR_6g035065 52.899 138 34 2 2 108 204 341 1.16e-36 131
MsG0380017241.01.T01 MTR_6g034955 52.174 138 35 2 2 108 204 341 4.60e-35 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017241.01.T01 AT1G58440 59.231 130 23 2 9 108 210 339 9.94e-42 145
MsG0380017241.01.T01 AT2G22830 57.664 137 28 2 2 108 265 401 1.53e-41 145
MsG0380017241.01.T01 AT4G37760 56.934 137 29 2 2 108 197 333 3.88e-40 140
MsG0380017241.01.T01 AT5G24150 38.889 126 46 3 9 103 197 322 6.75e-21 87.4
MsG0380017241.01.T01 AT5G24150 38.889 126 46 3 9 103 197 322 7.12e-21 87.4
MsG0380017241.01.T01 AT5G24160 32.090 134 59 4 2 103 190 323 3.47e-16 73.9
MsG0380017241.01.T01 AT5G24160 32.090 134 59 4 2 103 190 323 4.64e-16 73.6
MsG0380017241.01.T01 AT5G24160 32.090 134 59 4 2 103 113 246 4.95e-16 73.6

Find 102 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTCGACCCCTACGGTTTC+GGG 0.237985 3:+93947420 MsG0380017241.01.T01:five_prime_UTR
GAAGAGAATGGTACAATTAA+AGG 0.280394 3:+93950081 MsG0380017241.01.T01:five_prime_UTR
ATTTCACCATTGGAAATAGA+TGG 0.333959 3:-93950934 None:intergenic
ATCTATTTCCAATGGTGAAA+TGG 0.351927 3:+93950936 MsG0380017241.01.T01:CDS
ATGGTCGACCCCTACGGTTT+CGG 0.353513 3:+93947419 MsG0380017241.01.T01:five_prime_UTR
ATTGATGCTCAGCAAGTGTT+TGG 0.355900 3:+93949270 MsG0380017241.01.T01:five_prime_UTR
AACATGCGCCATCCCCTAAC+CGG 0.356195 3:+93951256 MsG0380017241.01.T01:CDS
ATGATATCAACGTCGCCGTT+TGG 0.370779 3:-93947575 None:intergenic
TTTCCCTCTCTCTGCTTCGC+TGG 0.410706 3:-93947338 None:intergenic
TTGATTGAGCTGGGACTTGA+AGG 0.413598 3:+93949081 MsG0380017241.01.T01:five_prime_UTR
TCGGCTGGCATGCTTCTGTT+TGG 0.423353 3:-93951192 None:intergenic
TGAAAGCAGCACTGAAGCTC+AGG 0.430683 3:-93951134 None:intergenic
AGTGTAAGCGAGAGCGGAGC+CGG 0.434336 3:-93947618 None:intergenic
AATGAACCAGACCGAATTGT+TGG 0.440764 3:+93949027 MsG0380017241.01.T01:five_prime_UTR
GAAGGGCTCCCGGTGGGATA+AGG 0.442777 3:-93951216 None:intergenic
TTGATGCTCAGCAAGTGTTT+GGG 0.446101 3:+93949271 MsG0380017241.01.T01:five_prime_UTR
TCCGCTCTCGCTTACACTCT+CGG 0.457292 3:+93947623 MsG0380017241.01.T01:five_prime_UTR
ATACTTTGCCATTTCACCAT+TGG 0.458675 3:-93950944 None:intergenic
CTGGAAGAAGCTTTCACAAT+GGG 0.462566 3:+93949364 MsG0380017241.01.T01:five_prime_UTR
CCGTTCTCTTTGTAATCCTA+AGG 0.466319 3:+93950190 MsG0380017241.01.T01:CDS
ATTGTCGGTGCTGGTGTCGC+CGG 0.469469 3:+93947599 MsG0380017241.01.T01:five_prime_UTR
AGTACAAATGAAAGATGCTC+AGG 0.475762 3:+93950109 MsG0380017241.01.T01:exon
TGTTTGGCATTGTCCTTATG+TGG 0.479932 3:-93951176 None:intergenic
CACGAGACTCTCTTATCCCT+TGG 0.490385 3:+93949320 MsG0380017241.01.T01:five_prime_UTR
TGTACCATTCTCTTCGAGTA+GGG 0.493101 3:-93950073 None:intergenic
AGCGGTGGTGGTTGTTGCAT+CGG 0.495786 3:-93947510 None:intergenic
CTATCTCAAATTGATTGAGC+TGG 0.497355 3:+93949071 MsG0380017241.01.T01:five_prime_UTR
GTAGCAACTCGCCAACAATT+CGG 0.499442 3:-93949038 None:intergenic
ACATGCGCCATCCCCTAACC+GGG 0.501803 3:+93951257 MsG0380017241.01.T01:CDS
AACTCGCCAACAATTCGGTC+TGG 0.508143 3:-93949033 None:intergenic
CTCAAAATGGTCGACCCCTA+CGG 0.514180 3:+93947413 MsG0380017241.01.T01:five_prime_UTR
TGGTGGTTGTTGCATCGGAA+TGG 0.516635 3:-93947505 None:intergenic
GAAGACAGTGGTAGCTCCAC+AGG 0.517798 3:+93950969 MsG0380017241.01.T01:CDS
TTGTACCATTCTCTTCGAGT+AGG 0.520014 3:-93950074 None:intergenic
CAGTGGACAAAGGCCACATA+AGG 0.527014 3:+93951163 MsG0380017241.01.T01:CDS
TCTCCCATCAGAAGGGCTCC+CGG 0.530754 3:-93951226 None:intergenic
GACGTTGATATCATCATTGT+CGG 0.531291 3:+93947584 MsG0380017241.01.T01:five_prime_UTR
ACTCTTACCATTGTTTGTGA+TGG 0.533015 3:+93950149 MsG0380017241.01.T01:CDS
GGAAATTGTAGAGTGCAGCC+AGG 0.534172 3:-93947466 None:intergenic
ATTAAAAGATCTGCATTCTC+CGG 0.538231 3:-93947552 None:intergenic
GATATCATCATTGTCGGTGC+TGG 0.540205 3:+93947590 MsG0380017241.01.T01:five_prime_UTR
CCCACCGGGAGCCCTTCTGA+TGG 0.540831 3:+93951222 MsG0380017241.01.T01:CDS
TTATGTTATGTAGTGTACGT+TGG 0.543075 3:+93950032 MsG0380017241.01.T01:intron
CAGCCGATCCTTATCCCACC+GGG 0.546632 3:+93951208 MsG0380017241.01.T01:CDS
CCGGTGGGATAAGGATCGGC+TGG 0.548262 3:-93951207 None:intergenic
GCCGAGAGTGTAAGCGAGAG+CGG 0.554979 3:-93947624 None:intergenic
GTGATCCACCCGAAACCGTA+GGG 0.555940 3:-93947428 None:intergenic
CCAGCCGATCCTTATCCCAC+CGG 0.563347 3:+93951207 MsG0380017241.01.T01:CDS
TATCTCAAATTGATTGAGCT+GGG 0.564234 3:+93949072 MsG0380017241.01.T01:five_prime_UTR
AGATCTGCATTCTCCGGTGG+CGG 0.564343 3:-93947546 None:intergenic
AAGTTTCACTCAGATATCGC+TGG 0.567766 3:+93949345 MsG0380017241.01.T01:five_prime_UTR
TGAACTCCATGTGCAAATCA+TGG 0.568768 3:+93950819 MsG0380017241.01.T01:CDS
TGCCACAGTCATCCCACCCC+CGG 0.571168 3:-93951275 None:intergenic
GAAAGCAGCACTGAAGCTCA+GGG 0.571236 3:-93951133 None:intergenic
AAGGTTCCATCTATTTCCAA+TGG 0.571490 3:+93950928 MsG0380017241.01.T01:CDS
ATCAATTTGAGATAGCCTCC+AGG 0.576174 3:-93949063 None:intergenic
TTCATAGCTGCAGTGGACAA+AGG 0.578009 3:+93951153 MsG0380017241.01.T01:CDS
GTTGGCGAGTTGCTACAACC+TGG 0.579187 3:+93949045 MsG0380017241.01.T01:five_prime_UTR
ACTTCCCTACTCGAAGAGAA+TGG 0.579687 3:+93950069 MsG0380017241.01.T01:five_prime_UTR
AACTAAGCCAACAAAACAAG+AGG 0.581348 3:-93950785 None:intergenic
CCACCGGGAGCCCTTCTGAT+GGG 0.585401 3:+93951223 MsG0380017241.01.T01:CDS
GAGAACATTACAACCGCCAC+CGG 0.589265 3:+93947533 MsG0380017241.01.T01:five_prime_UTR
CGTCCAGCGAAGCAGAGAGA+GGG 0.596585 3:+93947335 None:intergenic
TGCTGCTTTCATAGCTGCAG+TGG 0.598280 3:+93951146 MsG0380017241.01.T01:CDS
TGTTATTATTGCAGATTGTG+TGG 0.599886 3:+93949242 MsG0380017241.01.T01:intron
GAGTGCAGCCAGGGTGATGA+GGG 0.601302 3:-93947456 None:intergenic
TGAATGCATCTCCCATCAGA+AGG 0.601414 3:-93951234 None:intergenic
AAACTCAAAACTCTTTGCGT+CGG 0.601833 3:-93947387 None:intergenic
GCTCCCGGTGGGATAAGGAT+CGG 0.602220 3:-93951211 None:intergenic
TGTAATGTTCTCAGCGGTGG+TGG 0.602589 3:-93947522 None:intergenic
AGAGTGCAGCCAGGGTGATG+AGG 0.605059 3:-93947457 None:intergenic
CACATGCACCCTCATCACCC+TGG 0.605577 3:+93947448 MsG0380017241.01.T01:five_prime_UTR
ATTATCTAATGTAGGATGGA+CGG 0.607031 3:+93948978 MsG0380017241.01.T01:intron
TCTCGCTTACACTCTCGGCA+AGG 0.608886 3:+93947628 MsG0380017241.01.T01:five_prime_UTR
GAAACAACCATCACAAACAA+TGG 0.613084 3:-93950156 None:intergenic
TGTGATCCACCCGAAACCGT+AGG 0.613578 3:-93947429 None:intergenic
ATGTAGTGTACGTTGGAGCA+AGG 0.615947 3:+93950039 MsG0380017241.01.T01:intron
GACGGAGGGAGTACTTGGGA+AGG 0.618544 3:-93949421 None:intergenic
CCATCAGAAGGGCTCCCGGT+GGG 0.620077 3:-93951222 None:intergenic
ACGTCCAGCGAAGCAGAGAG+AGG 0.623229 3:+93947334 None:intergenic
GAAATTGTAGAGTGCAGCCA+GGG 0.624970 3:-93947465 None:intergenic
GTACAAATGAAAGATGCTCA+GGG 0.626558 3:+93950110 MsG0380017241.01.T01:exon
TCTAATGTAGGATGGACGGC+GGG 0.636695 3:+93948982 MsG0380017241.01.T01:intron
GAATGCATCTCCCATCAGAA+GGG 0.640289 3:-93951233 None:intergenic
CCTTAGGATTACAAAGAGAA+CGG 0.642410 3:-93950190 None:intergenic
ATCTAATGTAGGATGGACGG+CGG 0.644873 3:+93948981 MsG0380017241.01.T01:intron
GAGGGAGTACTTGGGAAGGG+AGG 0.650679 3:-93949417 None:intergenic
AAAAGATCTGCATTCTCCGG+TGG 0.650741 3:-93947549 None:intergenic
GGTTGTAATGTTCTCAGCGG+TGG 0.651335 3:-93947525 None:intergenic
ACGGAGGGAGTACTTGGGAA+GGG 0.655483 3:-93949420 None:intergenic
TCGACCCCTACGGTTTCGGG+TGG 0.658583 3:+93947423 MsG0380017241.01.T01:five_prime_UTR
CATGCGCCATCCCCTAACCG+GGG 0.661135 3:+93951258 MsG0380017241.01.T01:CDS
GGCAAAGTATTTGAAGACAG+TGG 0.664630 3:+93950957 MsG0380017241.01.T01:CDS
ACTAAGCCAACAAAACAAGA+GGG 0.667139 3:-93950784 None:intergenic
ATGCGCCATCCCCTAACCGG+GGG 0.670116 3:+93951259 MsG0380017241.01.T01:CDS
CCCATCAGAAGGGCTCCCGG+TGG 0.680583 3:-93951223 None:intergenic
GGCGAGTTGCTACAACCTGG+AGG 0.693043 3:+93949048 MsG0380017241.01.T01:five_prime_UTR
GCTGGAAGAAGCTTTCACAA+TGG 0.694395 3:+93949363 MsG0380017241.01.T01:five_prime_UTR
GGCGGTTGTAATGTTCTCAG+CGG 0.696843 3:-93947528 None:intergenic
TGATCCACCCGAAACCGTAG+GGG 0.715386 3:-93947427 None:intergenic
ACGTGACCATGATTTGCACA+TGG 0.720189 3:-93950825 None:intergenic
AAAGCAGCACTGAAGCTCAG+GGG 0.733354 3:-93951132 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCTATATATTAATAAGT+TGG + Chr3:93948348-93948367 MsG0380017241.01.T01:intron 10.0%
!! AATCTTATTGTTAATGATTA+TGG - Chr3:93949593-93949612 None:intergenic 15.0%
!! ACTTTATATCAGAAAAAAAA+CGG - Chr3:93949769-93949788 None:intergenic 15.0%
!! ATTTACAGTTCAAATATTAA+TGG + Chr3:93948475-93948494 MsG0380017241.01.T01:intron 15.0%
!! CCAAAATATAATACTTAAAA+TGG - Chr3:93948019-93948038 None:intergenic 15.0%
!! TAAAATAATTGTAATTGTAG+CGG + Chr3:93948112-93948131 MsG0380017241.01.T01:intron 15.0%
!! TAAACAAATGTTAATATGAA+TGG - Chr3:93947690-93947709 None:intergenic 15.0%
!! TTAATATTTGAACTGTAAAT+AGG - Chr3:93948475-93948494 None:intergenic 15.0%
!!! ATAATTTTTTCTGTTTTTCT+TGG - Chr3:93949644-93949663 None:intergenic 15.0%
!!! ATTTGCATTTAATTTTACTT+TGG - Chr3:93949539-93949558 None:intergenic 15.0%
!!! ATTTGTTTTTTGCTTATAAA+TGG + Chr3:93949705-93949724 MsG0380017241.01.T01:intron 15.0%
!!! CCATTTTAAGTATTATATTT+TGG + Chr3:93948016-93948035 MsG0380017241.01.T01:intron 15.0%
!!! GATTTTTTTGCTTATAATTT+AGG - Chr3:93949446-93949465 None:intergenic 15.0%
!!! TAACTTTCAAATTTCTATTT+TGG + Chr3:93947962-93947981 MsG0380017241.01.T01:intron 15.0%
!!! TTTGTTTTTTGCTTATAAAT+GGG + Chr3:93949706-93949725 MsG0380017241.01.T01:intron 15.0%
!!! TTTTGAAATAACATAAAAGT+TGG - Chr3:93949504-93949523 None:intergenic 15.0%
!! AATAATAGACAAAATAGGAT+TGG + Chr3:93950308-93950327 MsG0380017241.01.T01:intron 20.0%
!! ATAATAGACAAAATAGGATT+GGG + Chr3:93950309-93950328 MsG0380017241.01.T01:intron 20.0%
!! TAATACAAAGTGATATTATC+TGG - Chr3:93948044-93948063 None:intergenic 20.0%
!! TGTGAAATCATTTAATCTTA+TGG - Chr3:93950627-93950646 None:intergenic 20.0%
!! TTATGAATTATGAATGGAAT+GGG + Chr3:93947862-93947881 MsG0380017241.01.T01:intron 20.0%
!! TTTATTATAATCAATGACCT+TGG - Chr3:93949873-93949892 None:intergenic 20.0%
!!! AGTTTTCCATATTCATTTTA+GGG + Chr3:93948739-93948758 MsG0380017241.01.T01:intron 20.0%
!!! TAGTTTTCCATATTCATTTT+AGG + Chr3:93948738-93948757 MsG0380017241.01.T01:intron 20.0%
!!! TTTTTGCTTATAATTTAGGA+CGG - Chr3:93949442-93949461 None:intergenic 20.0%
! AAAAAAAAAACGACGAGAAT+AGG - Chr3:93950674-93950693 None:intergenic 25.0%
! AAATTACGAAGAAATAGGAA+TGG - Chr3:93947664-93947683 None:intergenic 25.0%
! AACAAAAACATAGTAGTTTG+AGG - Chr3:93949668-93949687 None:intergenic 25.0%
! AACTATTATCTAATGTAGGA+TGG + Chr3:93948974-93948993 MsG0380017241.01.T01:intron 25.0%
! AACTTCACTTAGAACAAAAA+GGG + Chr3:93949204-93949223 MsG0380017241.01.T01:intron 25.0%
! AAGACTTGAGGTAAATTATA+TGG + Chr3:93950501-93950520 MsG0380017241.01.T01:intron 25.0%
! AATTACGAAGAAATAGGAAT+GGG - Chr3:93947663-93947682 None:intergenic 25.0%
! AATTATAGCATTAGAGAGTT+TGG + Chr3:93950332-93950351 MsG0380017241.01.T01:intron 25.0%
! ACAAATGTTAATATGAATGG+TGG - Chr3:93947687-93947706 None:intergenic 25.0%
! AGATAGTTGTATATCAACTA+AGG + Chr3:93950373-93950392 MsG0380017241.01.T01:intron 25.0%
! ATTATAGCATTAGAGAGTTT+GGG + Chr3:93950333-93950352 MsG0380017241.01.T01:intron 25.0%
! CAACTTATGATATTCTATCA+TGG - Chr3:93950539-93950558 None:intergenic 25.0%
! CATTAAGGGATATTTATACA+GGG - Chr3:93948694-93948713 None:intergenic 25.0%
! GATAGTTGTATATCAACTAA+GGG + Chr3:93950374-93950393 MsG0380017241.01.T01:intron 25.0%
! GCATAACTATTATCTAATGT+AGG + Chr3:93948970-93948989 MsG0380017241.01.T01:intron 25.0%
! GTGGAAATAATAGACAAAAT+AGG + Chr3:93950303-93950322 MsG0380017241.01.T01:intron 25.0%
! GTGTAAAGTAATTAAATGCT+AGG - Chr3:93951037-93951056 None:intergenic 25.0%
! GTTATGAATTATGAATGGAA+TGG + Chr3:93947861-93947880 MsG0380017241.01.T01:intron 25.0%
! TAACTTCACTTAGAACAAAA+AGG + Chr3:93949203-93949222 MsG0380017241.01.T01:intron 25.0%
! TACCAGTTATGAATTATGAA+TGG + Chr3:93947856-93947875 MsG0380017241.01.T01:intron 25.0%
! TATAATTTACCTCAAGTCTT+TGG - Chr3:93950501-93950520 None:intergenic 25.0%
! TATGAATTATGAATGGAATG+GGG + Chr3:93947863-93947882 MsG0380017241.01.T01:intron 25.0%
! TTAGAAATGACAACATTAGA+TGG + Chr3:93948183-93948202 MsG0380017241.01.T01:intron 25.0%
! TTCCATTCATAATTCATAAC+TGG - Chr3:93947861-93947880 None:intergenic 25.0%
!! AAATTACTGTGTTTTGTATC+TGG + Chr3:93947732-93947751 MsG0380017241.01.T01:intron 25.0%
!! AGACATATAGATTTTGTGTA+AGG + Chr3:93948244-93948263 MsG0380017241.01.T01:intron 25.0%
!! GTTTTCCATATTCATTTTAG+GGG + Chr3:93948740-93948759 MsG0380017241.01.T01:intron 25.0%
!! TGTTCTAAGTGAAGTTAAAA+AGG - Chr3:93949200-93949219 None:intergenic 25.0%
!! TTTTCTTGGAATAAGTTTCA+TGG - Chr3:93949630-93949649 None:intergenic 25.0%
!!! ACAAGTACAAATTGGTTTTT+AGG + Chr3:93951011-93951030 MsG0380017241.01.T01:intron 25.0%
!!! AGTTAGTTTTAGTTAGTTTG+AGG + Chr3:93948610-93948629 MsG0380017241.01.T01:intron 25.0%
!!! GTCTTTTTTGCTTCTATTTT+GGG - Chr3:93949482-93949501 None:intergenic 25.0%
!!! TTGGTTGTTTTATGATGTAT+AGG + Chr3:93950598-93950617 MsG0380017241.01.T01:intron 25.0%
!!! TTTTTTGCTTATAAATGGGA+CGG + Chr3:93949710-93949729 MsG0380017241.01.T01:intron 25.0%
AAAAACGGAATGTGAAGTAA+AGG - Chr3:93949754-93949773 None:intergenic 30.0%
AAAAAGACAGGAAAAAGAAG+AGG - Chr3:93948832-93948851 None:intergenic 30.0%
AAATCCCATAGTAAATCAGA+TGG + Chr3:93950423-93950442 MsG0380017241.01.T01:intron 30.0%
AACAGATTTAACCATGGATA+CGG - Chr3:93947787-93947806 None:intergenic 30.0%
ATCTATTTCCAATGGTGAAA+TGG + Chr3:93950936-93950955 MsG0380017241.01.T01:CDS 30.0%
ATGGTTAAATCTGTTGTTGT+GGG + Chr3:93947792-93947811 MsG0380017241.01.T01:intron 30.0%
ATTAAAAGATCTGCATTCTC+CGG - Chr3:93947555-93947574 None:intergenic 30.0%
ATTATCTAATGTAGGATGGA+CGG + Chr3:93948978-93948997 MsG0380017241.01.T01:intron 30.0%
ATTTCACCATTGGAAATAGA+TGG - Chr3:93950937-93950956 None:intergenic 30.0%
CCATTAAGGGATATTTATAC+AGG - Chr3:93948695-93948714 None:intergenic 30.0%
CCTGTATAAATATCCCTTAA+TGG + Chr3:93948692-93948711 MsG0380017241.01.T01:intron 30.0%
CGAATTTCTGTACTACTTAT+GGG - Chr3:93950885-93950904 None:intergenic 30.0%
GAAGAGAATGGTACAATTAA+AGG + Chr3:93950081-93950100 MsG0380017241.01.T01:five_prime_UTR 30.0%
GATAAGGGAAAAAAATTTGC+AGG + Chr3:93951107-93951126 MsG0380017241.01.T01:intron 30.0%
GGTAGATCTAGAAAAATTGT+AGG + Chr3:93950466-93950485 MsG0380017241.01.T01:intron 30.0%
GTAAGGAGAATTAGATCAAA+TGG + Chr3:93948261-93948280 MsG0380017241.01.T01:intron 30.0%
GTTGAAAATTTGATCACCTT+AGG - Chr3:93950209-93950228 None:intergenic 30.0%
TAACAAGTAACAACTGAAGA+AGG - Chr3:93949996-93950015 None:intergenic 30.0%
TAAGAGTTAGCTGATGATAA+GGG + Chr3:93951092-93951111 MsG0380017241.01.T01:intron 30.0%
TATCTCAAATTGATTGAGCT+GGG + Chr3:93949072-93949091 MsG0380017241.01.T01:five_prime_UTR 30.0%
TCATTGATGAACTCCATTAA+GGG - Chr3:93948708-93948727 None:intergenic 30.0%
TGATTATGGAGAGAATAGAA+AGG - Chr3:93949579-93949598 None:intergenic 30.0%
TGATTTACTATGGGATTTAC+AGG - Chr3:93950421-93950440 None:intergenic 30.0%
TGTATATCAACTAAGGGTTT+GGG + Chr3:93950380-93950399 MsG0380017241.01.T01:intron 30.0%
TGTTATTATTGCAGATTGTG+TGG + Chr3:93949242-93949261 MsG0380017241.01.T01:intron 30.0%
TTAAAAACATCCAACATGTC+AGG - Chr3:93948906-93948925 None:intergenic 30.0%
TTATCTAACGGAATAAGACT+TGG + Chr3:93950579-93950598 MsG0380017241.01.T01:intron 30.0%
TTATGTTATGTAGTGTACGT+TGG + Chr3:93950032-93950051 MsG0380017241.01.T01:intron 30.0%
TTCATTGATGAACTCCATTA+AGG - Chr3:93948709-93948728 None:intergenic 30.0%
TTGTATATCAACTAAGGGTT+TGG + Chr3:93950379-93950398 MsG0380017241.01.T01:intron 30.0%
TTTCTTTCACTTCTTGATTC+TGG + Chr3:93949138-93949157 MsG0380017241.01.T01:intron 30.0%
! AATGGTTTTTACGAGAGAAA+AGG - Chr3:93947490-93947509 None:intergenic 30.0%
! ATTTTTCTAGATCTACCTCT+AGG - Chr3:93950463-93950482 None:intergenic 30.0%
! GCTTTTCATTTGACATTGAA+AGG + Chr3:93949847-93949866 MsG0380017241.01.T01:intron 30.0%
! GTTTTCCCCTAAAATGAATA+TGG - Chr3:93948748-93948767 None:intergenic 30.0%
! TGCAGATCTTTTAATCCAAA+CGG + Chr3:93947560-93947579 MsG0380017241.01.T01:five_prime_UTR 30.0%
! TTATTTCTTTCTGTGTTTGC+AGG + Chr3:93950753-93950772 MsG0380017241.01.T01:intron 30.0%
!!! GGTCTTTTTTGCTTCTATTT+TGG - Chr3:93949483-93949502 None:intergenic 30.0%
!!! TTTTGAGTTTCCTCTCAAAA+TGG + Chr3:93947400-93947419 MsG0380017241.01.T01:five_prime_UTR 30.0%
AAACTCAAAACTCTTTGCGT+CGG - Chr3:93947390-93947409 None:intergenic 35.0%
AACAGAACGCAAACAAAAAC+TGG - Chr3:93948860-93948879 None:intergenic 35.0%
AACTAAGCCAACAAAACAAG+AGG - Chr3:93950788-93950807 None:intergenic 35.0%
AAGGTTCCATCTATTTCCAA+TGG + Chr3:93950928-93950947 MsG0380017241.01.T01:CDS 35.0%
ACAGAACGCAAACAAAAACT+GGG - Chr3:93948859-93948878 None:intergenic 35.0%
ACCAATAGTCTGTAGAATTC+TGG + Chr3:93950710-93950729 MsG0380017241.01.T01:intron 35.0%
ACTAAGCCAACAAAACAAGA+GGG - Chr3:93950787-93950806 None:intergenic 35.0%
ACTCTCCATCTGATTTACTA+TGG - Chr3:93950431-93950450 None:intergenic 35.0%
ACTCTTACCATTGTTTGTGA+TGG + Chr3:93950149-93950168 MsG0380017241.01.T01:CDS 35.0%
ACTGATTATCCAAAGACTTG+AGG + Chr3:93950489-93950508 MsG0380017241.01.T01:intron 35.0%
ACTTTACACTTAGTGAGAAC+AGG + Chr3:93951048-93951067 MsG0380017241.01.T01:intron 35.0%
AGATGGTAGAAACTCAACTT+AGG + Chr3:93948200-93948219 MsG0380017241.01.T01:intron 35.0%
AGTACAAATGAAAGATGCTC+AGG + Chr3:93950109-93950128 MsG0380017241.01.T01:exon 35.0%
AGTGAAATCAAAAGAGACAG+AGG + Chr3:93948289-93948308 MsG0380017241.01.T01:intron 35.0%
AGTTGTACTTAGAAATGGCA+AGG - Chr3:93948570-93948589 None:intergenic 35.0%
ATGTAGCCAACGTTATCTAA+CGG + Chr3:93950567-93950586 MsG0380017241.01.T01:intron 35.0%
CACAACAACAGATTTAACCA+TGG - Chr3:93947793-93947812 None:intergenic 35.0%
CATGGTTAAATCTGTTGTTG+TGG + Chr3:93947791-93947810 MsG0380017241.01.T01:intron 35.0%
CCTTAGGATTACAAAGAGAA+CGG - Chr3:93950193-93950212 None:intergenic 35.0%
CGTGTTCTACAAGTACAAAT+TGG + Chr3:93951003-93951022 MsG0380017241.01.T01:intron 35.0%
CTAAGAGTTAGCTGATGATA+AGG + Chr3:93951091-93951110 MsG0380017241.01.T01:intron 35.0%
CTATCTCAAATTGATTGAGC+TGG + Chr3:93949071-93949090 MsG0380017241.01.T01:five_prime_UTR 35.0%
CTCTCCATCTGATTTACTAT+GGG - Chr3:93950430-93950449 None:intergenic 35.0%
CTTATTCCGTTAGATAACGT+TGG - Chr3:93950576-93950595 None:intergenic 35.0%
GAAACAACCATCACAAACAA+TGG - Chr3:93950159-93950178 None:intergenic 35.0%
GAAACTTAGCAGTGTGTATA+TGG + Chr3:93949108-93949127 MsG0380017241.01.T01:intron 35.0%
GACGTTGATATCATCATTGT+CGG + Chr3:93947584-93947603 MsG0380017241.01.T01:five_prime_UTR 35.0%
GCGAATTTCTGTACTACTTA+TGG - Chr3:93950886-93950905 None:intergenic 35.0%
GGTGGAAATTACGAAGAAAT+AGG - Chr3:93947669-93947688 None:intergenic 35.0%
GTACAAATGAAAGATGCTCA+GGG + Chr3:93950110-93950129 MsG0380017241.01.T01:exon 35.0%
TCCAGAATTCTACAGACTAT+TGG - Chr3:93950714-93950733 None:intergenic 35.0%
! ATACTTTGCCATTTCACCAT+TGG - Chr3:93950947-93950966 None:intergenic 35.0%
! ATCTGAGTGAAACTTTTCCA+AGG - Chr3:93949340-93949359 None:intergenic 35.0%
! TCTGAGTGAAACTTTTCCAA+GGG - Chr3:93949339-93949358 None:intergenic 35.0%
! TGCCATTTCTAAGTACAACT+GGG + Chr3:93948570-93948589 MsG0380017241.01.T01:intron 35.0%
! TGCTTATAATTTAGGACGGA+GGG - Chr3:93949438-93949457 None:intergenic 35.0%
! TTGCCATTTCTAAGTACAAC+TGG + Chr3:93948569-93948588 MsG0380017241.01.T01:intron 35.0%
! TTGCTTATAATTTAGGACGG+AGG - Chr3:93949439-93949458 None:intergenic 35.0%
! TTGTAATTGTAGCGGAGATA+AGG + Chr3:93948120-93948139 MsG0380017241.01.T01:intron 35.0%
!! TTTAGGTTTGTTGACTGTAC+AGG + Chr3:93947821-93947840 MsG0380017241.01.T01:intron 35.0%
AAACTGGGAGACAAAAAGAC+AGG - Chr3:93948844-93948863 None:intergenic 40.0%
AAATCATGGTCACGTCATAC+TGG + Chr3:93950833-93950852 MsG0380017241.01.T01:intron 40.0%
AAATCTGTTGTTGTGGGTCA+GGG + Chr3:93947798-93947817 MsG0380017241.01.T01:intron 40.0%
AAGTTTCACTCAGATATCGC+TGG + Chr3:93949345-93949364 MsG0380017241.01.T01:five_prime_UTR 40.0%
AATCATGGTCACGTCATACT+GGG + Chr3:93950834-93950853 MsG0380017241.01.T01:intron 40.0%
AATGAACCAGACCGAATTGT+TGG + Chr3:93949027-93949046 MsG0380017241.01.T01:five_prime_UTR 40.0%
AATGGATATTCCGACAGTCA+CGG + Chr3:93948493-93948512 MsG0380017241.01.T01:intron 40.0%
ACCCCAGTTGTACTTAGAAA+TGG - Chr3:93948575-93948594 None:intergenic 40.0%
ACTTGTAGAACACGAGTAGA+TGG - Chr3:93950997-93951016 None:intergenic 40.0%
AGAATGTTGCACTTGATGTG+TGG + Chr3:93950284-93950303 MsG0380017241.01.T01:intron 40.0%
AGGGTAAAATACCCTCGTAA+GGG - Chr3:93948659-93948678 None:intergenic 40.0%
AGTAGAACCTTGAGACCAAA+GGG - Chr3:93948793-93948812 None:intergenic 40.0%
AGTAGTACAGAAATTCGCTG+TGG + Chr3:93950888-93950907 MsG0380017241.01.T01:intron 40.0%
ATACAGGGAGCAAAAACAAG+AGG - Chr3:93948679-93948698 None:intergenic 40.0%
ATTGATGCTCAGCAAGTGTT+TGG + Chr3:93949270-93949289 MsG0380017241.01.T01:five_prime_UTR 40.0%
CATCAGCTAACTCTTAGCTA+AGG - Chr3:93951088-93951107 None:intergenic 40.0%
CATTTGACATTGAAAGGCCA+AGG + Chr3:93949853-93949872 MsG0380017241.01.T01:intron 40.0%
CCGTTCTCTTTGTAATCCTA+AGG + Chr3:93950190-93950209 MsG0380017241.01.T01:CDS 40.0%
CTGACTTCTAACTTTCCCTT+TGG + Chr3:93948775-93948794 MsG0380017241.01.T01:intron 40.0%
CTGGAAGAAGCTTTCACAAT+GGG + Chr3:93949364-93949383 MsG0380017241.01.T01:five_prime_UTR 40.0%
CTTATGGGATAGAACAGAAC+CGG - Chr3:93950870-93950889 None:intergenic 40.0%
GATGCATGGTATCACTAACA+TGG - Chr3:93947905-93947924 None:intergenic 40.0%
GCCATTTCTAAGTACAACTG+GGG + Chr3:93948571-93948590 MsG0380017241.01.T01:intron 40.0%
GTACTTAGAAATGGCAAGGT+GGG - Chr3:93948566-93948585 None:intergenic 40.0%
TAAATCTGTTGTTGTGGGTC+AGG + Chr3:93947797-93947816 MsG0380017241.01.T01:intron 40.0%
TAACTTTCCCTTTGGTCTCA+AGG + Chr3:93948783-93948802 MsG0380017241.01.T01:intron 40.0%
TACAGGGAGCAAAAACAAGA+GGG - Chr3:93948678-93948697 None:intergenic 40.0%
TACTTAGAAATGGCAAGGTG+GGG - Chr3:93948565-93948584 None:intergenic 40.0%
TAGTAGAACCTTGAGACCAA+AGG - Chr3:93948794-93948813 None:intergenic 40.0%
TGAACTCCATGTGCAAATCA+TGG + Chr3:93950819-93950838 MsG0380017241.01.T01:CDS 40.0%
TGTACCATTCTCTTCGAGTA+GGG - Chr3:93950076-93950095 None:intergenic 40.0%
TGTACTTAGAAATGGCAAGG+TGG - Chr3:93948567-93948586 None:intergenic 40.0%
TGTTAGTGATACCATGCATC+CGG + Chr3:93947905-93947924 MsG0380017241.01.T01:intron 40.0%
TGTTTGGCATTGTCCTTATG+TGG - Chr3:93951179-93951198 None:intergenic 40.0%
TTGATGCTCAGCAAGTGTTT+GGG + Chr3:93949271-93949290 MsG0380017241.01.T01:five_prime_UTR 40.0%
TTGCTTATAAATGGGACGGA+GGG + Chr3:93949714-93949733 MsG0380017241.01.T01:intron 40.0%
TTGTACCATTCTCTTCGAGT+AGG - Chr3:93950077-93950096 None:intergenic 40.0%
TTTGCTTATAAATGGGACGG+AGG + Chr3:93949713-93949732 MsG0380017241.01.T01:intron 40.0%
! ATCAATTTGAGATAGCCTCC+AGG - Chr3:93949066-93949085 None:intergenic 40.0%
! GGCAAAGTATTTGAAGACAG+TGG + Chr3:93950957-93950976 MsG0380017241.01.T01:CDS 40.0%
! GTTTGGGTATGCTCTTTTCA+AGG + Chr3:93949287-93949306 MsG0380017241.01.T01:five_prime_UTR 40.0%
! GTTTGTTAGTTCCCTTACGA+GGG + Chr3:93948645-93948664 MsG0380017241.01.T01:intron 40.0%
!! AGTTTGTTAGTTCCCTTACG+AGG + Chr3:93948644-93948663 MsG0380017241.01.T01:intron 40.0%
!! CAAGTTGATTCCTGACATGT+TGG + Chr3:93948893-93948912 MsG0380017241.01.T01:intron 40.0%
!! GGTATGCTCTTTTCAAGGAT+GGG + Chr3:93949292-93949311 MsG0380017241.01.T01:five_prime_UTR 40.0%
AAAAGATCTGCATTCTCCGG+TGG - Chr3:93947552-93947571 None:intergenic 45.0%
AAGTGTGGTCGGTTACATCA+TGG - Chr3:93948412-93948431 None:intergenic 45.0%
ACTGTGAATGTCCGTATCCA+TGG + Chr3:93947773-93947792 MsG0380017241.01.T01:intron 45.0%
ACTTCCCTACTCGAAGAGAA+TGG + Chr3:93950069-93950088 MsG0380017241.01.T01:five_prime_UTR 45.0%
ATAGATGGAACCTTCTGACC+AGG - Chr3:93950922-93950941 None:intergenic 45.0%
ATCTAATGTAGGATGGACGG+CGG + Chr3:93948981-93949000 MsG0380017241.01.T01:intron 45.0%
ATGATATCAACGTCGCCGTT+TGG - Chr3:93947578-93947597 None:intergenic 45.0%
ATGGATATTCCGACAGTCAC+GGG + Chr3:93948494-93948513 MsG0380017241.01.T01:intron 45.0%
ATGTAACCGACCACACTTAG+TGG + Chr3:93948414-93948433 MsG0380017241.01.T01:intron 45.0%
ATGTAGTGTACGTTGGAGCA+AGG + Chr3:93950039-93950058 MsG0380017241.01.T01:intron 45.0%
ATTCGTGCGTGCAGAATCAT+TGG - Chr3:93949815-93949834 None:intergenic 45.0%
CTTTCTGTGTTTGCAGGTAG+AGG + Chr3:93950759-93950778 MsG0380017241.01.T01:intron 45.0%
GAAATTGTAGAGTGCAGCCA+GGG - Chr3:93947468-93947487 None:intergenic 45.0%
GAATGCATCTCCCATCAGAA+GGG - Chr3:93951236-93951255 None:intergenic 45.0%
GAGAGTAGCTCAAATCCTAG+AGG + Chr3:93950445-93950464 MsG0380017241.01.T01:intron 45.0%
GAGGGTAAAATACCCTCGTA+AGG - Chr3:93948660-93948679 None:intergenic 45.0%
GATATCATCATTGTCGGTGC+TGG + Chr3:93947590-93947609 MsG0380017241.01.T01:five_prime_UTR 45.0%
GCTGGAAGAAGCTTTCACAA+TGG + Chr3:93949363-93949382 MsG0380017241.01.T01:five_prime_UTR 45.0%
GTAGCAACTCGCCAACAATT+CGG - Chr3:93949041-93949060 None:intergenic 45.0%
TGAATGCATCTCCCATCAGA+AGG - Chr3:93951237-93951256 None:intergenic 45.0%
TTATCGCCACTAAGTGTGGT+CGG - Chr3:93948423-93948442 None:intergenic 45.0%
TTCATAGCTGCAGTGGACAA+AGG + Chr3:93951153-93951172 MsG0380017241.01.T01:CDS 45.0%
TTGATTGAGCTGGGACTTGA+AGG + Chr3:93949081-93949100 MsG0380017241.01.T01:five_prime_UTR 45.0%
TTGTCGCTGTCTAAGTACAC+CGG - Chr3:93947927-93947946 None:intergenic 45.0%
! ACGTGACCATGATTTGCACA+TGG - Chr3:93950828-93950847 None:intergenic 45.0%
! GATTTTTACCCTTGGGAGTG+AGG + Chr3:93948523-93948542 MsG0380017241.01.T01:intron 45.0%
! GGCAGCAGATTTTTACCCTT+GGG + Chr3:93948516-93948535 MsG0380017241.01.T01:intron 45.0%
!! GGGTATGCTCTTTTCAAGGA+TGG + Chr3:93949291-93949310 MsG0380017241.01.T01:five_prime_UTR 45.0%
!!! GAGGTTCCCTCTTGTTTTGT+TGG + Chr3:93950778-93950797 MsG0380017241.01.T01:CDS 45.0%
!! ATAAAATAAAAATAAAACAA+TGG - Chr3:93950737-93950756 None:intergenic 5.0%
AACTCGCCAACAATTCGGTC+TGG - Chr3:93949036-93949055 None:intergenic 50.0%
ACACGAGTAGATGGTACCTG+TGG - Chr3:93950988-93951007 None:intergenic 50.0%
ACTAAGGGTTTGGGCATGTG+TGG + Chr3:93950389-93950408 MsG0380017241.01.T01:intron 50.0%
AGGGTAATTCCTCACTCCCA+AGG - Chr3:93948535-93948554 None:intergenic 50.0%
CACACTTAGTGGCGATAAGG+TGG + Chr3:93948425-93948444 MsG0380017241.01.T01:intron 50.0%
CACCTTATCGCCACTAAGTG+TGG - Chr3:93948427-93948446 None:intergenic 50.0%
CACGAGACTCTCTTATCCCT+TGG + Chr3:93949320-93949339 MsG0380017241.01.T01:five_prime_UTR 50.0%
CAGTGGACAAAGGCCACATA+AGG + Chr3:93951163-93951182 MsG0380017241.01.T01:CDS 50.0%
CATACTGGGAGATCCTTCAC+CGG + Chr3:93950848-93950867 MsG0380017241.01.T01:intron 50.0%
CTCAAAATGGTCGACCCCTA+CGG + Chr3:93947413-93947432 MsG0380017241.01.T01:five_prime_UTR 50.0%
GACCACACTTAGTGGCGATA+AGG + Chr3:93948422-93948441 MsG0380017241.01.T01:intron 50.0%
GAGAACATTACAACCGCCAC+CGG + Chr3:93947533-93947552 MsG0380017241.01.T01:five_prime_UTR 50.0%
GGAAATTGTAGAGTGCAGCC+AGG - Chr3:93947469-93947488 None:intergenic 50.0%
GGATAGAACAGAACCGGTGA+AGG - Chr3:93950864-93950883 None:intergenic 50.0%
GGCGGTTGTAATGTTCTCAG+CGG - Chr3:93947531-93947550 None:intergenic 50.0%
GGGTAATTCCTCACTCCCAA+GGG - Chr3:93948534-93948553 None:intergenic 50.0%
GGTTGTAATGTTCTCAGCGG+TGG - Chr3:93947528-93947547 None:intergenic 50.0%
GTCTAAGTACACCGGATGCA+TGG - Chr3:93947919-93947938 None:intergenic 50.0%
GTTCTACTATCCAGCTCAGC+TGG + Chr3:93948805-93948824 MsG0380017241.01.T01:intron 50.0%
GTTGTTGTGGGTCAGGGTTT+AGG + Chr3:93947804-93947823 MsG0380017241.01.T01:intron 50.0%
TCTAATGTAGGATGGACGGC+GGG + Chr3:93948982-93949001 MsG0380017241.01.T01:intron 50.0%
TGGATATTCCGACAGTCACG+GGG + Chr3:93948495-93948514 MsG0380017241.01.T01:intron 50.0%
TGGTGGTTGTTGCATCGGAA+TGG - Chr3:93947508-93947527 None:intergenic 50.0%
TGTAATGTTCTCAGCGGTGG+TGG - Chr3:93947525-93947544 None:intergenic 50.0%
! AAAGCAGCACTGAAGCTCAG+GGG - Chr3:93951135-93951154 None:intergenic 50.0%
! AAATGGGACGGAGGGAGTAT+TGG + Chr3:93949722-93949741 MsG0380017241.01.T01:intron 50.0%
! GAAAGCAGCACTGAAGCTCA+GGG - Chr3:93951136-93951155 None:intergenic 50.0%
! GGGCAGCAGATTTTTACCCT+TGG + Chr3:93948515-93948534 MsG0380017241.01.T01:intron 50.0%
! GGTTGATGTTCCTGGTCAGA+AGG + Chr3:93950909-93950928 MsG0380017241.01.T01:intron 50.0%
! TAGGGGTCGACCATTTTGAG+AGG - Chr3:93947413-93947432 None:intergenic 50.0%
! TGAAAGCAGCACTGAAGCTC+AGG - Chr3:93951137-93951156 None:intergenic 50.0%
! TTCGCTGTGGTTGATGTTCC+TGG + Chr3:93950901-93950920 MsG0380017241.01.T01:intron 50.0%
! TTCTGGCTGATCTTGAGTGC+TGG + Chr3:93949155-93949174 MsG0380017241.01.T01:intron 50.0%
!! TGCTGCTTTCATAGCTGCAG+TGG + Chr3:93951146-93951165 MsG0380017241.01.T01:CDS 50.0%
!! TTAGGACGGAGGGAGTACTT+GGG - Chr3:93949428-93949447 None:intergenic 50.0%
!! TTTAGGACGGAGGGAGTACT+TGG - Chr3:93949429-93949448 None:intergenic 50.0%
AACATGCGCCATCCCCTAAC+CGG + Chr3:93951256-93951275 MsG0380017241.01.T01:CDS 55.0%
AAGAAGAGGACCAGCTGAGC+TGG - Chr3:93948818-93948837 None:intergenic 55.0%
AAGGGTTTGGGCATGTGTGG+AGG + Chr3:93950392-93950411 MsG0380017241.01.T01:intron 55.0%
AGATCTGCATTCTCCGGTGG+CGG - Chr3:93947549-93947568 None:intergenic 55.0%
ATGGTCGACCCCTACGGTTT+CGG + Chr3:93947419-93947438 MsG0380017241.01.T01:five_prime_UTR 55.0%
GAAGACAGTGGTAGCTCCAC+AGG + Chr3:93950969-93950988 MsG0380017241.01.T01:CDS 55.0%
GTGATCCACCCGAAACCGTA+GGG - Chr3:93947431-93947450 None:intergenic 55.0%
GTTGGCGAGTTGCTACAACC+TGG + Chr3:93949045-93949064 MsG0380017241.01.T01:five_prime_UTR 55.0%
TCCGCTCTCGCTTACACTCT+CGG + Chr3:93947623-93947642 MsG0380017241.01.T01:five_prime_UTR 55.0%
TCGGCTGGCATGCTTCTGTT+TGG - Chr3:93951195-93951214 None:intergenic 55.0%
TCTCGCTTACACTCTCGGCA+AGG + Chr3:93947628-93947647 MsG0380017241.01.T01:five_prime_UTR 55.0%
TGATCCACCCGAAACCGTAG+GGG - Chr3:93947430-93947449 None:intergenic 55.0%
TGTGATCCACCCGAAACCGT+AGG - Chr3:93947432-93947451 None:intergenic 55.0%
! AGCGGTGGTGGTTGTTGCAT+CGG - Chr3:93947513-93947532 None:intergenic 55.0%
!! ACGGAGGGAGTACTTGGGAA+GGG - Chr3:93949423-93949442 None:intergenic 55.0%
ACATGCGCCATCCCCTAACC+GGG + Chr3:93951257-93951276 MsG0380017241.01.T01:CDS 60.0%
AGAGTGCAGCCAGGGTGATG+AGG - Chr3:93947460-93947479 None:intergenic 60.0%
AGTCATCCCACCCCCGGTTA+GGG - Chr3:93951272-93951291 None:intergenic 60.0%
AGTGTAAGCGAGAGCGGAGC+CGG - Chr3:93947621-93947640 None:intergenic 60.0%
ATCTGCTGCCCCGTGACTGT+CGG - Chr3:93948506-93948525 None:intergenic 60.0%
CACATGCACCCTCATCACCC+TGG + Chr3:93947448-93947467 MsG0380017241.01.T01:five_prime_UTR 60.0%
CAGCCGATCCTTATCCCACC+GGG + Chr3:93951208-93951227 MsG0380017241.01.T01:CDS 60.0%
CCAGCCGATCCTTATCCCAC+CGG + Chr3:93951207-93951226 MsG0380017241.01.T01:CDS 60.0%
GAGTGCAGCCAGGGTGATGA+GGG - Chr3:93947459-93947478 None:intergenic 60.0%
GCTCCCGGTGGGATAAGGAT+CGG - Chr3:93951214-93951233 None:intergenic 60.0%
GGCGAGTTGCTACAACCTGG+AGG + Chr3:93949048-93949067 MsG0380017241.01.T01:five_prime_UTR 60.0%
TCTCCCATCAGAAGGGCTCC+CGG - Chr3:93951229-93951248 None:intergenic 60.0%
TGGTCGACCCCTACGGTTTC+GGG + Chr3:93947420-93947439 MsG0380017241.01.T01:five_prime_UTR 60.0%
! GCCGAGAGTGTAAGCGAGAG+CGG - Chr3:93947627-93947646 None:intergenic 60.0%
!! ATTGTCGGTGCTGGTGTCGC+CGG + Chr3:93947599-93947618 MsG0380017241.01.T01:five_prime_UTR 60.0%
!! GACGGAGGGAGTACTTGGGA+AGG - Chr3:93949424-93949443 None:intergenic 60.0%
!! GAGGGAGTACTTGGGAAGGG+AGG - Chr3:93949420-93949439 None:intergenic 60.0%
AACCGGGGGTGGGATGACTG+TGG + Chr3:93951273-93951292 MsG0380017241.01.T01:CDS 65.0%
ATGCGCCATCCCCTAACCGG+GGG + Chr3:93951259-93951278 MsG0380017241.01.T01:CDS 65.0%
CAGTCATCCCACCCCCGGTT+AGG - Chr3:93951273-93951292 None:intergenic 65.0%
CATGCGCCATCCCCTAACCG+GGG + Chr3:93951258-93951277 MsG0380017241.01.T01:CDS 65.0%
CCACCGGGAGCCCTTCTGAT+GGG + Chr3:93951223-93951242 MsG0380017241.01.T01:CDS 65.0%
CCATCAGAAGGGCTCCCGGT+GGG - Chr3:93951225-93951244 None:intergenic 65.0%
CCGGTGGGATAAGGATCGGC+TGG - Chr3:93951210-93951229 None:intergenic 65.0%
GAAGGGCTCCCGGTGGGATA+AGG - Chr3:93951219-93951238 None:intergenic 65.0%
GGCAAGGTGGGGTGTGCACA+GGG - Chr3:93948554-93948573 None:intergenic 65.0%
GTCATCCCACCCCCGGTTAG+GGG - Chr3:93951271-93951290 None:intergenic 65.0%
TCGACCCCTACGGTTTCGGG+TGG + Chr3:93947423-93947442 MsG0380017241.01.T01:five_prime_UTR 65.0%
TGCCACAGTCATCCCACCCC+CGG - Chr3:93951278-93951297 None:intergenic 65.0%
TGGCAAGGTGGGGTGTGCAC+AGG - Chr3:93948555-93948574 None:intergenic 65.0%
CCCACCGGGAGCCCTTCTGA+TGG + Chr3:93951222-93951241 MsG0380017241.01.T01:CDS 70.0%
CCCATCAGAAGGGCTCCCGG+TGG - Chr3:93951226-93951245 None:intergenic 70.0%
GCCATCCCCTAACCGGGGGT+GGG + Chr3:93951263-93951282 MsG0380017241.01.T01:CDS 70.0%
TCCCACCCCCGGTTAGGGGA+TGG - Chr3:93951267-93951286 None:intergenic 70.0%
CGCCATCCCCTAACCGGGGG+TGG + Chr3:93951262-93951281 MsG0380017241.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 93947340 93951305 93947340 ID=MsG0380017241.01;Name=MsG0380017241.01
Chr3 mRNA 93947340 93951305 93947340 ID=MsG0380017241.01.T01;Parent=MsG0380017241.01;Name=MsG0380017241.01.T01;_AED=0.25;_eAED=0.25;_QI=666|0.87|0.77|1|0.37|0.22|9|0|133
Chr3 exon 93947340 93947649 93947340 ID=MsG0380017241.01.T01:exon:1977;Parent=MsG0380017241.01.T01
Chr3 exon 93948992 93949102 93948992 ID=MsG0380017241.01.T01:exon:1978;Parent=MsG0380017241.01.T01
Chr3 exon 93949256 93949429 93949256 ID=MsG0380017241.01.T01:exon:1979;Parent=MsG0380017241.01.T01
Chr3 exon 93950045 93950211 93950045 ID=MsG0380017241.01.T01:exon:1980;Parent=MsG0380017241.01.T01
Chr3 exon 93950775 93950840 93950775 ID=MsG0380017241.01.T01:exon:1981;Parent=MsG0380017241.01.T01
Chr3 exon 93950928 93950990 93950928 ID=MsG0380017241.01.T01:exon:1982;Parent=MsG0380017241.01.T01
Chr3 exon 93951129 93951305 93951129 ID=MsG0380017241.01.T01:exon:1983;Parent=MsG0380017241.01.T01
Chr3 five_prime_UTR 93947340 93947649 93947340 ID=MsG0380017241.01.T01:five_prime_utr;Parent=MsG0380017241.01.T01
Chr3 five_prime_UTR 93948992 93949102 93948992 ID=MsG0380017241.01.T01:five_prime_utr;Parent=MsG0380017241.01.T01
Chr3 five_prime_UTR 93949256 93949429 93949256 ID=MsG0380017241.01.T01:five_prime_utr;Parent=MsG0380017241.01.T01
Chr3 five_prime_UTR 93950045 93950115 93950045 ID=MsG0380017241.01.T01:five_prime_utr;Parent=MsG0380017241.01.T01
Chr3 CDS 93950116 93950211 93950116 ID=MsG0380017241.01.T01:cds;Parent=MsG0380017241.01.T01
Chr3 CDS 93950775 93950840 93950775 ID=MsG0380017241.01.T01:cds;Parent=MsG0380017241.01.T01
Chr3 CDS 93950928 93950990 93950928 ID=MsG0380017241.01.T01:cds;Parent=MsG0380017241.01.T01
Chr3 CDS 93951129 93951305 93951129 ID=MsG0380017241.01.T01:cds;Parent=MsG0380017241.01.T01
Gene Sequence

>MsG0380017241.01.T01

ATGAAAGATGCTCAGGGAATTTTCAGCATGTGCACTCTTACCATTGTTTGTGATGGTTGTTTCTCAAACTTGCGCCGTTCTCTTTGTAATCCTAAGGTAGAGGTTCCCTCTTGTTTTGTTGGCTTAGTTTTAGAAAATTGTGAACTCCATGTGCAAATCATGAAGGTTCCATCTATTTCCAATGGTGAAATGGCAAAGTATTTGAAGACAGTGGTAGCTCCACAGGTACCCCTGAGCTTCAGTGCTGCTTTCATAGCTGCAGTGGACAAAGGCCACATAAGGACAATGCCAAACAGAAGCATGCCAGCCGATCCTTATCCCACCGGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGCCATCCCCTAACCGGGGGTGGGATGACTGTGGCATTATCTGA
Protein sequence

>MsG0380017241.01.T01

MKDAQGIFSMCTLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLVLENCELHVQIMKVPSISNGEMAKYLKTVVAPQVPLSFSAAFIAAVDKGHIRTMPNRSMPADPYPTGSPSDGRCIQHAPSPNRGWDDCGII*