AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017457.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017457.01.T01 MTR_3g107880 85.030 334 22 5 1 307 1 333 0.0 557
MsG0380017457.01.T01 MTR_3g107880 84.731 334 22 6 1 307 1 332 0.0 550
MsG0380017457.01.T01 MTR_3g107880 82.609 276 20 5 59 307 1 275 9.06e-156 439
MsG0380017457.01.T01 MTR_4g116420 63.636 209 74 1 100 306 129 337 2.42e-94 286
MsG0380017457.01.T01 MTR_5g024340 57.971 207 84 2 100 306 129 332 3.15e-80 249
MsG0380017457.01.T01 MTR_1g086350 48.178 247 113 5 87 321 6 249 1.13e-69 219
MsG0380017457.01.T01 MTR_1g086350 49.569 232 104 4 100 321 107 335 3.40e-67 216
MsG0380017457.01.T01 MTR_1g086350 49.569 232 104 4 100 321 123 351 3.53e-67 216
MsG0380017457.01.T01 MTR_2g033000 46.383 235 113 4 100 324 105 336 3.13e-62 202
MsG0380017457.01.T01 MTR_4g123080 49.537 216 96 3 100 305 100 312 7.09e-62 202
MsG0380017457.01.T01 MTR_4g123080 49.537 216 96 3 100 305 118 330 7.36e-62 202
MsG0380017457.01.T01 MTR_4g123080 54.128 109 49 1 197 305 110 217 7.11e-33 123
MsG0380017457.01.T01 MTR_6g081850 34.615 234 117 6 100 308 84 306 2.35e-32 123
MsG0380017457.01.T01 MTR_1g014190 33.191 235 109 4 100 286 57 291 2.39e-32 124
MsG0380017457.01.T01 MTR_1g014190 33.191 235 109 4 100 286 95 329 4.48e-32 124
MsG0380017457.01.T01 MTR_1g014640 34.685 222 130 5 98 316 111 320 1.99e-31 121
MsG0380017457.01.T01 MTR_1g013400 34.685 222 130 5 98 316 111 320 1.99e-31 121
MsG0380017457.01.T01 MTR_1g050520 34.025 241 133 7 100 326 423 651 3.20e-31 124
MsG0380017457.01.T01 MTR_4g007440 43.421 152 80 2 157 304 160 309 5.63e-31 120
MsG0380017457.01.T01 MTR_2g008850 35.714 224 125 5 98 316 22 231 1.01e-30 116
MsG0380017457.01.T01 MTR_5g071550 37.156 218 111 6 100 306 159 361 1.26e-30 119
MsG0380017457.01.T01 MTR_3g074610 35.586 222 124 5 100 316 71 278 1.66e-30 117
MsG0380017457.01.T01 MTR_3g105880 41.818 165 88 4 141 299 143 305 1.78e-30 119
MsG0380017457.01.T01 MTR_3g105730 32.917 240 139 6 98 327 68 295 2.32e-30 117
MsG0380017457.01.T01 MTR_3g105880 43.709 151 78 3 141 286 143 291 2.40e-30 117
MsG0380017457.01.T01 MTR_3g105730 33.193 238 137 6 100 327 48 273 3.45e-30 116
MsG0380017457.01.T01 MTR_5g063940 34.685 222 126 5 100 316 24 231 5.44e-30 114
MsG0380017457.01.T01 MTR_2g008850 36.364 220 121 5 100 314 70 275 1.02e-29 115
MsG0380017457.01.T01 MTR_5g063940 34.685 222 126 5 100 316 71 278 1.55e-29 114
MsG0380017457.01.T01 MTR_3g464700 36.869 198 107 4 91 282 114 299 3.19e-29 115
MsG0380017457.01.T01 MTR_1g115570 33.784 222 128 6 98 316 129 334 1.18e-28 114
MsG0380017457.01.T01 MTR_4g094208 34.685 222 126 5 100 316 66 273 8.13e-28 110
MsG0380017457.01.T01 MTR_3g464650 35.678 199 110 4 91 283 90 276 1.45e-27 110
MsG0380017457.01.T01 MTR_5g071550 38.095 189 93 5 100 279 159 332 3.27e-27 110
MsG0380017457.01.T01 MTR_3g091060 34.973 183 108 3 100 279 130 304 3.56e-26 107
MsG0380017457.01.T01 MTR_2g078760 32.377 244 140 7 84 316 21 250 9.62e-25 101
MsG0380017457.01.T01 MTR_2g078760 32.377 244 140 7 84 316 100 329 1.67e-24 102
MsG0380017457.01.T01 MTR_8g463130 33.628 226 123 8 100 316 43 250 2.76e-23 97.4
MsG0380017457.01.T01 MTR_8g463130 33.628 226 123 8 100 316 71 278 3.16e-23 97.8
MsG0380017457.01.T01 MTR_5g009370 34.158 202 113 5 100 289 92 285 2.15e-22 96.3
MsG0380017457.01.T01 MTR_2g040500 30.769 221 112 6 100 286 272 485 3.32e-22 97.8
MsG0380017457.01.T01 MTR_4g094542 35.829 187 102 5 100 280 155 329 1.34e-21 94.7
MsG0380017457.01.T01 MTR_3g068200 31.455 213 121 5 100 294 128 333 2.79e-21 94.0
MsG0380017457.01.T01 MTR_3g491830 25.641 273 162 7 98 333 92 360 3.42e-21 94.0
MsG0380017457.01.T01 MTR_4g125810 30.882 204 113 5 100 286 258 450 3.52e-21 94.7
MsG0380017457.01.T01 MTR_1g015110 31.401 207 114 7 100 286 295 493 6.54e-21 94.0
MsG0380017457.01.T01 MTR_5g080680 34.343 198 101 6 100 278 137 324 8.73e-21 92.8
MsG0380017457.01.T01 MTR_2g078760 33.000 200 113 6 84 272 100 289 2.20e-20 90.1
MsG0380017457.01.T01 MTR_3g104710 39.098 133 71 3 157 286 364 489 4.27e-20 91.7
MsG0380017457.01.T01 MTR_1g028300 34.715 193 108 5 100 284 150 332 1.52e-19 89.0
MsG0380017457.01.T01 MTR_3g105730 39.474 114 68 1 100 213 70 182 3.84e-18 82.4
MsG0380017457.01.T01 MTR_8g102550 30.412 194 115 5 100 282 157 341 7.24e-18 84.3
MsG0380017457.01.T01 MTR_2g435550 30.085 236 112 11 84 279 88 310 3.24e-16 79.0
MsG0380017457.01.T01 MTR_2g435550 30.085 236 112 11 84 279 88 310 3.97e-16 79.0
MsG0380017457.01.T01 MTR_2g435550 30.085 236 112 11 84 279 74 296 4.07e-16 78.6
MsG0380017457.01.T01 MTR_3g032700 26.415 318 187 10 27 307 7 314 4.94e-16 79.0
MsG0380017457.01.T01 MTR_5g071550 42.105 114 53 3 100 208 159 264 8.77e-16 77.0
MsG0380017457.01.T01 MTR_3g032660 26.101 318 188 10 27 307 7 314 1.33e-15 77.8
MsG0380017457.01.T01 MTR_7g080170 28.226 248 131 8 55 281 14 235 5.95e-15 75.5
MsG0380017457.01.T01 MTR_7g080170 28.226 248 131 8 55 281 122 343 1.25e-14 75.1
MsG0380017457.01.T01 MTR_1g083690 32.184 174 90 6 153 308 169 332 1.71e-14 73.9
MsG0380017457.01.T01 MTR_7g112490 30.811 185 96 6 146 308 172 346 2.25e-14 73.9
MsG0380017457.01.T01 MTR_4g120410 35.172 145 70 6 153 279 171 309 2.32e-14 73.6
MsG0380017457.01.T01 MTR_7g112490 30.769 208 106 8 146 326 190 386 2.56e-14 73.6
MsG0380017457.01.T01 MTR_7g090530 27.273 220 126 7 98 283 72 291 6.83e-14 72.8
MsG0380017457.01.T01 MTR_1g019760 29.289 239 127 8 100 315 70 289 8.19e-14 72.4
MsG0380017457.01.T01 MTR_1g019760 29.289 239 127 8 100 315 70 289 9.27e-14 72.0
MsG0380017457.01.T01 MTR_7g021530 35.172 145 70 5 156 282 140 278 1.30e-13 71.2
MsG0380017457.01.T01 MTR_1g112840 28.251 223 116 9 100 283 86 303 2.36e-13 70.9
MsG0380017457.01.T01 MTR_7g021530 34.694 147 68 5 156 282 190 328 3.30e-13 70.5
MsG0380017457.01.T01 MTR_8g074930 24.555 281 165 10 69 307 50 325 3.67e-13 70.1
MsG0380017457.01.T01 MTR_1g106855 27.727 220 117 8 100 280 66 282 3.91e-13 69.3
MsG0380017457.01.T01 MTR_1g067210 26.829 246 129 10 100 305 81 315 4.86e-13 69.7
MsG0380017457.01.T01 MTR_7g021530 34.694 147 68 5 156 282 231 369 5.25e-13 70.1
MsG0380017457.01.T01 MTR_1g106855 27.477 222 119 8 98 280 64 282 6.88e-13 69.3
MsG0380017457.01.T01 MTR_7g070510 34.965 143 70 5 156 281 187 323 9.56e-13 69.3
MsG0380017457.01.T01 MTR_1g116260 28.125 224 115 10 100 283 85 302 1.08e-12 68.6
MsG0380017457.01.T01 MTR_3g101540 28.033 239 130 8 100 315 71 290 1.21e-12 68.9
MsG0380017457.01.T01 MTR_3g101540 28.033 239 130 8 100 315 71 290 1.47e-12 68.6
MsG0380017457.01.T01 MTR_7g081020 25.911 247 134 10 98 305 79 315 2.12e-12 67.8
MsG0380017457.01.T01 MTR_7g060770 25.322 233 135 8 86 279 254 486 2.57e-12 68.2
MsG0380017457.01.T01 MTR_2g033910 27.778 252 139 10 100 313 80 326 4.49e-12 67.0
MsG0380017457.01.T01 MTR_7g081020 26.222 225 122 9 98 283 79 298 4.74e-12 66.2
MsG0380017457.01.T01 MTR_5g080680 34.667 150 76 5 100 230 137 283 8.19e-12 65.5
MsG0380017457.01.T01 MTR_7g090550 27.236 246 132 10 98 304 73 310 2.19e-11 65.1
MsG0380017457.01.T01 MTR_2g078760 33.824 136 81 3 84 213 100 232 4.39e-11 62.8
MsG0380017457.01.T01 MTR_4g013295 25.854 205 120 7 130 315 139 330 6.73e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017457.01.T01 AT2G25620 56.812 345 110 6 1 307 1 344 1.14e-125 366
MsG0380017457.01.T01 AT2G25620 56.812 345 110 6 1 307 1 344 1.14e-125 366
MsG0380017457.01.T01 AT2G33700 59.135 208 82 2 100 307 128 332 5.03e-82 254
MsG0380017457.01.T01 AT3G51470 55.556 207 89 2 100 306 67 270 6.21e-77 239
MsG0380017457.01.T01 AT3G51470 55.556 207 89 2 100 306 111 314 1.18e-76 239
MsG0380017457.01.T01 AT3G62260 50.222 225 98 4 100 313 32 253 3.17e-68 216
MsG0380017457.01.T01 AT3G62260 50.222 225 98 4 100 313 122 343 7.55e-68 218
MsG0380017457.01.T01 AT3G62260 50.222 225 98 4 100 313 121 342 9.20e-68 218
MsG0380017457.01.T01 AT1G48040 44.856 243 114 4 73 305 103 335 7.62e-57 189
MsG0380017457.01.T01 AT3G17250 44.495 218 108 4 100 305 163 379 1.24e-49 171
MsG0380017457.01.T01 AT5G24940 36.486 222 126 5 98 316 67 276 1.43e-34 132
MsG0380017457.01.T01 AT5G10740 36.937 222 125 5 98 316 67 276 8.74e-34 127
MsG0380017457.01.T01 AT5G10740 36.937 222 125 5 98 316 67 276 8.74e-34 127
MsG0380017457.01.T01 AT1G78200 35.135 222 128 3 100 316 24 234 4.96e-33 123
MsG0380017457.01.T01 AT1G78200 35.135 222 128 3 100 316 24 234 4.96e-33 123
MsG0380017457.01.T01 AT1G78200 35.135 222 128 3 100 316 69 279 1.10e-32 123
MsG0380017457.01.T01 AT1G78200 35.135 222 128 3 100 316 69 279 1.10e-32 123
MsG0380017457.01.T01 AT1G78200 35.135 222 128 3 100 316 69 279 1.10e-32 123
MsG0380017457.01.T01 AT2G20630 33.617 235 135 6 100 327 68 288 4.86e-32 121
MsG0380017457.01.T01 AT2G20630 33.784 222 128 5 100 316 68 275 5.00e-32 121
MsG0380017457.01.T01 AT4G28400 35.135 222 125 5 100 316 50 257 1.89e-31 119
MsG0380017457.01.T01 AT4G31750 35.586 222 128 5 98 316 67 276 2.35e-31 120
MsG0380017457.01.T01 AT4G31750 35.586 222 128 5 98 316 67 276 2.35e-31 120
MsG0380017457.01.T01 AT4G31750 35.586 222 128 5 98 316 67 276 2.43e-31 120
MsG0380017457.01.T01 AT4G28400 35.135 222 125 5 100 316 72 279 3.43e-31 119
MsG0380017457.01.T01 AT1G18030 33.333 234 120 6 100 308 114 336 1.40e-30 119
MsG0380017457.01.T01 AT5G53140 32.727 220 133 5 100 316 137 344 1.43e-30 120
MsG0380017457.01.T01 AT5G53140 32.727 220 133 5 100 316 137 344 1.43e-30 120
MsG0380017457.01.T01 AT4G31860 30.830 253 127 4 100 304 57 309 2.60e-30 118
MsG0380017457.01.T01 AT4G31860 32.353 238 109 5 100 287 57 292 1.97e-29 115
MsG0380017457.01.T01 AT1G67820 35.211 213 119 5 87 292 107 307 3.22e-29 116
MsG0380017457.01.T01 AT1G67820 29.667 300 169 8 23 292 56 343 3.26e-29 117
MsG0380017457.01.T01 AT1G34750 34.234 222 127 5 100 316 71 278 4.06e-29 114
MsG0380017457.01.T01 AT1G34750 34.234 222 127 5 100 316 71 278 4.06e-29 114
MsG0380017457.01.T01 AT1G34750 34.234 222 127 5 100 316 71 278 4.06e-29 114
MsG0380017457.01.T01 AT2G25070 29.644 253 130 4 100 304 57 309 9.12e-29 114
MsG0380017457.01.T01 AT2G25070 29.644 253 130 4 100 304 57 309 9.12e-29 114
MsG0380017457.01.T01 AT1G07160 36.239 218 116 6 100 306 158 363 1.90e-28 114
MsG0380017457.01.T01 AT1G22280 35.135 222 125 6 100 316 70 277 3.14e-28 111
MsG0380017457.01.T01 AT1G43900 33.036 224 130 7 98 316 157 365 1.26e-27 111
MsG0380017457.01.T01 AT2G30020 36.111 216 118 6 100 306 175 379 4.40e-27 110
MsG0380017457.01.T01 AT2G40860 32.099 243 134 8 100 326 428 655 6.07e-26 108
MsG0380017457.01.T01 AT2G40860 31.535 241 138 7 100 326 330 557 6.28e-26 108
MsG0380017457.01.T01 AT2G40860 33.929 224 117 8 100 307 428 636 7.62e-26 108
MsG0380017457.01.T01 AT1G22280 34.211 228 125 7 100 316 70 283 8.76e-26 104
MsG0380017457.01.T01 AT3G15260 33.184 223 128 6 100 316 78 285 2.25e-25 103
MsG0380017457.01.T01 AT3G15260 33.184 223 128 6 100 316 78 285 2.25e-25 103
MsG0380017457.01.T01 AT1G07430 30.038 263 159 7 38 283 101 355 2.41e-25 106
MsG0380017457.01.T01 AT4G31860 31.390 223 101 5 98 270 55 275 6.16e-25 102
MsG0380017457.01.T01 AT5G51760 42.466 146 74 3 148 290 192 330 3.13e-24 102
MsG0380017457.01.T01 AT5G59220 34.826 201 104 5 100 283 153 343 3.48e-24 102
MsG0380017457.01.T01 AT5G51760 42.466 146 74 3 148 290 222 360 3.69e-24 102
MsG0380017457.01.T01 AT2G40180 34.247 219 120 6 100 306 166 372 6.15e-24 101
MsG0380017457.01.T01 AT1G18030 33.333 198 96 6 100 272 114 300 9.49e-24 99.8
MsG0380017457.01.T01 AT4G28400 35.556 180 101 4 98 272 70 239 2.61e-23 97.4
MsG0380017457.01.T01 AT2G29380 32.751 229 109 9 100 297 117 331 9.74e-22 95.1
MsG0380017457.01.T01 AT1G17550 30.909 220 109 5 100 286 242 451 7.41e-21 93.6
MsG0380017457.01.T01 AT1G17550 30.909 220 109 5 100 286 242 451 7.41e-21 93.6
MsG0380017457.01.T01 AT2G34740 30.804 224 132 8 100 316 124 331 8.83e-21 92.0
MsG0380017457.01.T01 AT4G26080 32.338 201 111 6 100 286 177 366 9.40e-21 92.8
MsG0380017457.01.T01 AT1G34750 33.708 178 103 4 100 272 71 238 2.44e-20 89.0
MsG0380017457.01.T01 AT3G11410 41.667 132 67 3 155 283 219 343 2.46e-20 91.7
MsG0380017457.01.T01 AT5G57050 30.198 202 116 6 100 286 165 356 4.24e-20 90.9
MsG0380017457.01.T01 AT5G57050 30.198 202 116 6 100 286 125 316 4.85e-20 90.5
MsG0380017457.01.T01 AT1G72770 33.180 217 107 7 100 286 243 451 1.67e-19 89.7
MsG0380017457.01.T01 AT1G72770 33.180 217 107 7 100 286 243 451 1.67e-19 89.7
MsG0380017457.01.T01 AT1G72770 33.180 217 107 7 100 286 243 451 1.67e-19 89.7
MsG0380017457.01.T01 AT4G27800 25.182 274 164 7 74 307 64 336 2.13e-18 85.9
MsG0380017457.01.T01 AT2G34740 32.778 180 102 7 100 272 120 287 8.75e-18 83.2
MsG0380017457.01.T01 AT2G34740 32.778 180 102 7 100 272 138 305 8.83e-18 83.2
MsG0380017457.01.T01 AT4G27800 25.092 271 162 7 74 304 64 333 1.32e-17 82.8
MsG0380017457.01.T01 AT4G27800 25.856 263 153 8 74 295 64 325 3.54e-17 81.6
MsG0380017457.01.T01 AT3G16800 37.415 147 67 5 156 283 74 214 2.64e-16 78.2
MsG0380017457.01.T01 AT3G16800 37.415 147 67 5 156 283 74 214 2.64e-16 78.2
MsG0380017457.01.T01 AT2G40860 33.889 180 91 7 100 263 428 595 2.82e-16 80.1
MsG0380017457.01.T01 AT5G02760 30.172 232 114 11 98 292 75 295 4.63e-16 79.0
MsG0380017457.01.T01 AT3G16800 36.313 179 83 8 156 313 169 337 8.30e-16 77.8
MsG0380017457.01.T01 AT3G16800 36.313 179 83 8 156 313 169 337 8.30e-16 77.8
MsG0380017457.01.T01 AT3G16800 36.313 179 83 8 156 313 169 337 8.30e-16 77.8
MsG0380017457.01.T01 AT5G59220 37.415 147 72 4 100 229 153 296 1.27e-15 76.6
MsG0380017457.01.T01 AT4G08260 30.093 216 112 8 101 314 25 203 2.51e-14 71.6
MsG0380017457.01.T01 AT3G12620 28.870 239 126 10 83 282 71 304 6.02e-14 72.8
MsG0380017457.01.T01 AT3G12620 28.870 239 126 10 83 282 71 304 6.02e-14 72.8
MsG0380017457.01.T01 AT1G47380 28.870 239 128 8 100 315 69 288 7.24e-14 72.4
MsG0380017457.01.T01 AT1G16220 31.148 183 98 7 121 282 161 336 1.17e-13 72.0
MsG0380017457.01.T01 AT5G27930 31.285 179 91 7 156 313 176 343 1.59e-13 71.2
MsG0380017457.01.T01 AT5G27930 31.285 179 91 7 156 313 176 343 1.59e-13 71.2
MsG0380017457.01.T01 AT1G79630 32.370 173 87 7 156 310 111 271 3.57e-13 70.5
MsG0380017457.01.T01 AT1G79630 32.370 173 87 7 156 310 111 271 3.57e-13 70.5
MsG0380017457.01.T01 AT1G79630 32.370 173 87 7 156 310 111 271 3.57e-13 70.5
MsG0380017457.01.T01 AT1G79630 32.370 173 87 7 156 310 111 271 3.57e-13 70.5
MsG0380017457.01.T01 AT1G79630 32.370 173 87 7 156 310 151 311 5.17e-13 70.1
MsG0380017457.01.T01 AT1G79630 32.370 173 87 7 156 310 151 311 5.17e-13 70.1
MsG0380017457.01.T01 AT1G79630 32.370 173 87 7 156 310 217 377 7.83e-13 69.7
MsG0380017457.01.T01 AT1G79630 31.792 173 88 6 156 310 221 381 8.17e-13 69.7
MsG0380017457.01.T01 AT3G06270 28.704 216 121 7 100 284 93 306 8.89e-13 68.9
MsG0380017457.01.T01 AT3G05640 30.058 173 89 6 153 305 168 328 9.64e-13 68.9
MsG0380017457.01.T01 AT3G05640 30.058 173 89 6 153 305 168 328 9.64e-13 68.9
MsG0380017457.01.T01 AT3G05640 30.058 173 89 6 153 305 168 328 9.64e-13 68.9
MsG0380017457.01.T01 AT4G32950 26.415 212 127 6 100 288 77 282 1.26e-12 68.2
MsG0380017457.01.T01 AT5G01700 30.500 200 109 8 128 310 84 270 1.53e-12 68.2
MsG0380017457.01.T01 AT1G68410 30.000 240 124 10 100 315 78 297 1.73e-12 68.6
MsG0380017457.01.T01 AT1G68410 30.000 240 124 10 100 315 78 297 1.73e-12 68.6
MsG0380017457.01.T01 AT1G68410 30.000 240 124 10 100 315 78 297 1.73e-12 68.6
MsG0380017457.01.T01 AT1G68410 30.000 240 124 10 100 315 78 297 1.73e-12 68.6
MsG0380017457.01.T01 AT3G51370 25.784 287 159 11 69 310 50 327 1.87e-12 68.2
MsG0380017457.01.T01 AT3G51370 25.784 287 159 11 69 310 50 327 1.87e-12 68.2
MsG0380017457.01.T01 AT3G02750 33.803 142 70 4 156 279 215 350 2.56e-12 68.2
MsG0380017457.01.T01 AT3G02750 33.803 142 70 4 156 279 215 350 2.56e-12 68.2
MsG0380017457.01.T01 AT5G01700 30.500 200 109 8 128 310 133 319 3.70e-12 67.0
MsG0380017457.01.T01 AT1G09160 27.615 239 131 8 100 315 73 292 4.71e-12 67.0
MsG0380017457.01.T01 AT1G09160 27.615 239 131 8 100 315 73 292 4.71e-12 67.0
MsG0380017457.01.T01 AT3G55050 27.642 246 126 11 76 282 73 305 6.00e-12 66.6
MsG0380017457.01.T01 AT3G55050 27.642 246 126 11 76 282 73 305 6.00e-12 66.6
MsG0380017457.01.T01 AT3G16560 28.049 164 94 5 154 293 273 436 1.14e-11 65.9
MsG0380017457.01.T01 AT3G16560 28.049 164 94 5 154 293 273 436 1.42e-11 65.9
MsG0380017457.01.T01 AT3G16560 28.049 164 94 5 154 293 273 436 1.42e-11 65.9
MsG0380017457.01.T01 AT3G16560 28.049 164 94 5 154 293 273 436 1.42e-11 65.9
MsG0380017457.01.T01 AT5G19280 29.048 210 128 8 88 282 333 536 1.67e-11 65.9
MsG0380017457.01.T01 AT1G22280 37.719 114 68 2 100 213 70 180 2.32e-11 62.8
MsG0380017457.01.T01 AT5G26010 31.250 144 75 5 156 281 145 282 5.91e-11 63.2
MsG0380017457.01.T01 AT5G06750 25.490 255 144 10 89 304 76 323 6.49e-11 63.5
MsG0380017457.01.T01 AT5G06750 25.490 255 144 10 89 304 76 323 6.49e-11 63.5

Find 87 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCGCAAAATCTACAGCATTT+TGG 0.230172 3:+96482668 None:intergenic
GCAGCAGCCTCCACCGAATT+TGG 0.237367 3:-96482532 MsG0380017457.01.T01:CDS
TCATAGGCTGTGATGGGATT+TGG 0.239926 3:-96482705 MsG0380017457.01.T01:CDS
GCATTGGCTACTCTTGTTAT+AGG 0.258949 3:-96483295 MsG0380017457.01.T01:CDS
CTTAATGTTGCTCGAGCTAT+TGG 0.303340 3:-96482829 MsG0380017457.01.T01:CDS
GCAATAGATGGATTAGGATT+TGG 0.325019 3:+96484814 None:intergenic
TATCGGGTTCCGGTCAAATA+TGG 0.330817 3:-96484104 MsG0380017457.01.T01:CDS
AGTTTCTGACTGTAGGTTGC+TGG 0.335395 3:-96483004 MsG0380017457.01.T01:intron
TCCGGAGGATGTGCTGATAT+CGG 0.336894 3:-96484121 MsG0380017457.01.T01:CDS
CATAGGCTGTGATGGGATTT+GGG 0.362692 3:-96482704 MsG0380017457.01.T01:CDS
GAGCGTGGCGCTACCAAATT+CGG 0.397152 3:+96482519 None:intergenic
CATCCTCCGGAACGGAGCTT+TGG 0.398949 3:+96484133 None:intergenic
CTTTCATGCAACCTGGTTTG+TGG 0.400398 3:+96482911 None:intergenic
TTCCTTCCAAAGCTCCGTTC+CGG 0.404057 3:-96484139 MsG0380017457.01.T01:CDS
CTCTGCTCTTTCATGCAACC+TGG 0.407237 3:+96482904 None:intergenic
GTCTACGATGGATATCTTAA+CGG 0.416027 3:-96482856 MsG0380017457.01.T01:CDS
GCAGAAGCAATAGATGGATT+AGG 0.417848 3:+96484808 None:intergenic
CGAAAAGCAGAAGCAATAGA+TGG 0.432400 3:+96484802 None:intergenic
AGCTGTGTGCAGTAAGGATT+TGG 0.432490 3:-96482617 MsG0380017457.01.T01:CDS
CAGAGGCGTATTGAGGCATC+TGG 0.433389 3:-96482886 MsG0380017457.01.T01:CDS
TGACTGTAGGTTGCTGGTGG+TGG 0.438915 3:-96482998 MsG0380017457.01.T01:intron
CCGGAGGATGTGCTGATATC+GGG 0.442854 3:-96484120 MsG0380017457.01.T01:CDS
CTCAATGCTGCCCTTGCATC+CGG 0.452615 3:-96483325 MsG0380017457.01.T01:CDS
TTGCTGGTGGTGGCAAATGC+TGG 0.454788 3:-96482988 MsG0380017457.01.T01:CDS
AAATCCTTACTGCACACAGC+TGG 0.456373 3:+96482619 None:intergenic
ATGCAGTGGTGCCGGATGCA+AGG 0.459353 3:+96483314 None:intergenic
GCAAACAGACTATGCATTTG+CGG 0.463349 3:-96483359 MsG0380017457.01.T01:CDS
TGCATCCGGCACCACTGCAT+TGG 0.476188 3:-96483311 MsG0380017457.01.T01:CDS
TGCAGTGGTGCCGGATGCAA+GGG 0.482277 3:+96483315 None:intergenic
GATGTGCTGATATCGGGTTC+CGG 0.494574 3:-96484114 MsG0380017457.01.T01:CDS
CCCGATATCAGCACATCCTC+CGG 0.497125 3:+96484120 None:intergenic
ATGGCTTGGTCAGGTGTTGA+TGG 0.499220 3:-96483493 MsG0380017457.01.T01:intron
TTATCATCGAGAATGAACTT+TGG 0.500922 3:+96483427 None:intergenic
AGTAGCCAATGCAGTGGTGC+CGG 0.504279 3:+96483306 None:intergenic
ACTATCCTTTCAATATCCAC+TGG 0.504474 3:+96483397 None:intergenic
TCTACGATGGATATCTTAAC+GGG 0.504610 3:-96482855 MsG0380017457.01.T01:CDS
CACAGGAGCTTCTCTGCTGA+AGG 0.507072 3:-96482489 None:intergenic
TTTCTCATCATAGGCTGTGA+TGG 0.509830 3:-96482712 MsG0380017457.01.T01:CDS
CGACCCAGCTGTGTGCAGTA+AGG 0.512510 3:-96482623 MsG0380017457.01.T01:CDS
TTCTCATCATAGGCTGTGAT+GGG 0.519805 3:-96482711 MsG0380017457.01.T01:CDS
TGCATAGTCTGTTTGCAGAA+AGG 0.536620 3:+96483366 None:intergenic
ATAGATGGATTAGGATTTGG+AGG 0.539565 3:+96484817 None:intergenic
GGCGCTACCAAATTCGGTGG+AGG 0.547224 3:+96482525 None:intergenic
CAGTAAGGATTTGGTTGACG+AGG 0.548489 3:-96482608 MsG0380017457.01.T01:CDS
ATTTCCCAGTGGATATTGAA+AGG 0.550709 3:-96483402 MsG0380017457.01.T01:CDS
CTTCCAAAGCTCCGTTCCGG+AGG 0.555450 3:-96484136 MsG0380017457.01.T01:CDS
TGGCTACTCTTGTTATAGGA+AGG 0.559140 3:-96483291 MsG0380017457.01.T01:intron
CTCCTGTGCACTCTGGAGCG+TGG 0.561216 3:+96482504 None:intergenic
CTATCCTTTCAATATCCACT+GGG 0.563023 3:+96483398 None:intergenic
GAAAGAGCAGAGGCGTATTG+AGG 0.564348 3:-96482893 MsG0380017457.01.T01:CDS
ATGTCAAGAGACCACAAACC+AGG 0.564828 3:-96482922 MsG0380017457.01.T01:CDS
AGAGAAGCTCCTGTGCACTC+TGG 0.567952 3:+96482497 None:intergenic
CGCCACGCTCCAGAGTGCAC+AGG 0.568670 3:-96482506 MsG0380017457.01.T01:CDS
TGGCACATGGAAGGAATGAA+AGG 0.568858 3:-96482802 MsG0380017457.01.T01:CDS
AATCCTTACTGCACACAGCT+GGG 0.571658 3:+96482620 None:intergenic
TTTCTGCATGGTAAAACAAG+AGG 0.572653 3:+96484760 None:intergenic
ATTGGTGACTGGCACATGGA+AGG 0.574252 3:-96482811 MsG0380017457.01.T01:CDS
CTCCGGAACGGAGCTTTGGA+AGG 0.575225 3:+96484137 None:intergenic
TTCTGACTGTAGGTTGCTGG+TGG 0.579507 3:-96483001 MsG0380017457.01.T01:intron
TTGCTCGAGCTATTGGTGAC+TGG 0.582496 3:-96482822 MsG0380017457.01.T01:CDS
GAGGACGAATTTCTCATCAT+AGG 0.583587 3:-96482721 MsG0380017457.01.T01:CDS
ACACATCCTCCATATTTGAC+CGG 0.585526 3:+96484095 None:intergenic
AGACAATTTAGCTGTTGTTG+TGG 0.586656 3:-96482565 MsG0380017457.01.T01:CDS
AGCTATTGGTGACTGGCACA+TGG 0.600561 3:-96482815 MsG0380017457.01.T01:CDS
TGGTCAGGTGTTGATGGACA+CGG 0.606334 3:-96483487 MsG0380017457.01.T01:intron
GAAGGAATGAAAGGCAAAGA+CGG 0.610967 3:-96482793 MsG0380017457.01.T01:CDS
GCTTTGGAAGGAAATCAGAC+TGG 0.619255 3:+96484149 None:intergenic
AGGCGTATTGAGGCATCTGG+AGG 0.620598 3:-96482883 MsG0380017457.01.T01:CDS
CGGGTTCCGGTCAAATATGG+AGG 0.621074 3:-96484101 MsG0380017457.01.T01:CDS
CGAGCAGTGTTGTGCCGTCG+TGG 0.624108 3:-96482958 MsG0380017457.01.T01:CDS
AGTTCAGGCTCTGCACTGAG+TGG 0.625933 3:+96482766 None:intergenic
CGTGGCGCTACCAAATTCGG+TGG 0.636710 3:+96482522 None:intergenic
TATGATGAGAAATTCGTCCT+CGG 0.637476 3:+96482723 None:intergenic
GGTGTGAATTGTTTCAGTGA+AGG 0.642841 3:-96484862 MsG0380017457.01.T01:CDS
GTTGTCTGATGTATCTGCTG+AGG 0.644724 3:-96484187 MsG0380017457.01.T01:CDS
TATCAGCACATCCTCCGGAA+CGG 0.646071 3:+96484125 None:intergenic
GACTACAAAACTCACTGCCG+AGG 0.646136 3:-96482740 MsG0380017457.01.T01:CDS
TCTGGAGGGTCTGTCTACGA+TGG 0.652044 3:-96482868 MsG0380017457.01.T01:CDS
GGCGTATTGAGGCATCTGGA+GGG 0.653537 3:-96482882 MsG0380017457.01.T01:CDS
CAGGTTGCATGAAAGAGCAG+AGG 0.671998 3:-96482903 MsG0380017457.01.T01:CDS
AACAAGAGTAGCCAATGCAG+TGG 0.673761 3:+96483300 None:intergenic
GGAATGAAAGGCAAAGACGG+TGG 0.681718 3:-96482790 MsG0380017457.01.T01:CDS
ATAGTCTGTTTGCAGAAAGG+CGG 0.688045 3:+96483369 None:intergenic
GGTTTCTTACAAGAGAAGCG+TGG 0.710252 3:+96484725 None:intergenic
ATCTGCTGAGGATGTTACGA+AGG 0.719861 3:-96484175 MsG0380017457.01.T01:CDS
CGATGATAAAGATTTCCCAG+TGG 0.737162 3:-96483413 MsG0380017457.01.T01:CDS
TCAGGTGTTGATGGACACGG+CGG 0.797344 3:-96483484 MsG0380017457.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGATATTCAATAATTT+GGG - Chr3:96484106-96484125 MsG0380017457.01.T01:CDS 10.0%
!! ATTTAATGTAGATAAAATCT+AGG - Chr3:96482867-96482886 MsG0380017457.01.T01:CDS 15.0%
!!! ACAAAAAATTATCATACTTT+TGG + Chr3:96484162-96484181 None:intergenic 15.0%
!!! GATTTTGATATTCAATAATT+TGG - Chr3:96484105-96484124 MsG0380017457.01.T01:CDS 15.0%
!! AAAAAGAAAAGACAAAACAA+AGG + Chr3:96483613-96483632 None:intergenic 20.0%
!! AAGTAACGTTATATTTCAAA+TGG - Chr3:96483857-96483876 MsG0380017457.01.T01:intron 20.0%
!! ATTGATTATTGATGTTAGTA+GGG - Chr3:96483063-96483082 MsG0380017457.01.T01:intron 20.0%
!! CAAAAGAAAAAACAAAAGAT+CGG + Chr3:96482668-96482687 None:intergenic 20.0%
!! TGCTAATTTAAAGAAAACAA+AGG + Chr3:96484139-96484158 None:intergenic 20.0%
! AACATCAATAATCAATCCTA+AGG + Chr3:96483059-96483078 None:intergenic 25.0%
! AGAACACATCAATAAAATGA+AGG + Chr3:96483132-96483151 None:intergenic 25.0%
! AGAGAAATGTGAAATAATGA+TGG - Chr3:96482920-96482939 MsG0380017457.01.T01:CDS 25.0%
! GATTGATTATTGATGTTAGT+AGG - Chr3:96483062-96483081 MsG0380017457.01.T01:intron 25.0%
! TAACACTATCATATCAGTAA+AGG + Chr3:96483517-96483536 None:intergenic 25.0%
! TAATATGTGTTTATGCACAT+TGG + Chr3:96483741-96483760 None:intergenic 25.0%
! TTTATTGATGTGTTCTTTCA+TGG - Chr3:96483136-96483155 MsG0380017457.01.T01:intron 25.0%
!! ATAGAAGGAAATTTTTGTTG+AGG - Chr3:96482896-96482915 MsG0380017457.01.T01:CDS 25.0%
!! TGCTAATCTTCTTTTGTAAT+TGG - Chr3:96483692-96483711 MsG0380017457.01.T01:intron 25.0%
!!! TAGTTGTTGATTATGTTTTG+TGG - Chr3:96483020-96483039 MsG0380017457.01.T01:intron 25.0%
AAAAACTCCATAGCTAGTAA+AGG + Chr3:96483770-96483789 None:intergenic 30.0%
AAATGTGAAATAATGATGGC+GGG - Chr3:96482924-96482943 MsG0380017457.01.T01:CDS 30.0%
AAGGAGAGAATAACGAATAA+CGG + Chr3:96483594-96483613 None:intergenic 30.0%
AATTGGTATTGCTTTACCTT+TGG - Chr3:96483709-96483728 MsG0380017457.01.T01:intron 30.0%
ACGTTATATTTCAAATGGCT+TGG - Chr3:96483862-96483881 MsG0380017457.01.T01:intron 30.0%
AGAGCATGAAAATGGAAATA+TGG + Chr3:96484261-96484280 None:intergenic 30.0%
CATAAATCTGATTGAGGTTT+GGG - Chr3:96484207-96484226 MsG0380017457.01.T01:intron 30.0%
GAAATGTGAAATAATGATGG+CGG - Chr3:96482923-96482942 MsG0380017457.01.T01:CDS 30.0%
GAGCATGAAAATGGAAATAT+GGG + Chr3:96484260-96484279 None:intergenic 30.0%
GTGACAAATGGAAAGAAAAA+AGG + Chr3:96482800-96482819 None:intergenic 30.0%
TTATCATCGAGAATGAACTT+TGG + Chr3:96483945-96483964 None:intergenic 30.0%
! AAATCTAGGACTAGAATAGA+AGG - Chr3:96482881-96482900 MsG0380017457.01.T01:CDS 30.0%
! CTGATATGATAGTGTTAGAA+TGG - Chr3:96483520-96483539 MsG0380017457.01.T01:intron 30.0%
!! ATGTTTGTGTTGACAGTTTT+AGG - Chr3:96483297-96483316 MsG0380017457.01.T01:CDS 30.0%
!!! AATTTTTTGTCCGCATGTTT+TGG - Chr3:96484172-96484191 MsG0380017457.01.T01:CDS 30.0%
!!! TGATGTTGCTTTTCTTGTTT+TGG - Chr3:96482702-96482721 MsG0380017457.01.T01:CDS 30.0%
ACTATCCTTTCAATATCCAC+TGG + Chr3:96483975-96483994 None:intergenic 35.0%
AGACAATTTAGCTGTTGTTG+TGG - Chr3:96484804-96484823 MsG0380017457.01.T01:CDS 35.0%
ATAACGAATAACGGCATATG+AGG + Chr3:96483585-96483604 None:intergenic 35.0%
ATTTCCCAGTGGATATTGAA+AGG - Chr3:96483967-96483986 MsG0380017457.01.T01:intron 35.0%
CACTACATGAAAGTGACAAA+TGG + Chr3:96482812-96482831 None:intergenic 35.0%
CTATCCTTTCAATATCCACT+GGG + Chr3:96483974-96483993 None:intergenic 35.0%
GCATAAATCTGATTGAGGTT+TGG - Chr3:96484206-96484225 MsG0380017457.01.T01:intron 35.0%
GGCTCAACAAACATATAGAT+GGG - Chr3:96483330-96483349 MsG0380017457.01.T01:CDS 35.0%
GTCTACGATGGATATCTTAA+CGG - Chr3:96484513-96484532 MsG0380017457.01.T01:intron 35.0%
TATGATGAGAAATTCGTCCT+CGG + Chr3:96484649-96484668 None:intergenic 35.0%
TCTACGATGGATATCTTAAC+GGG - Chr3:96484514-96484533 MsG0380017457.01.T01:intron 35.0%
TGATTGTAGTTTCTGACTGT+AGG - Chr3:96484358-96484377 MsG0380017457.01.T01:intron 35.0%
TGTATTTGATGTCATGTCAG+AGG + Chr3:96484285-96484304 None:intergenic 35.0%
TTTCGTACTTCCAAAACATG+CGG + Chr3:96484185-96484204 None:intergenic 35.0%
TTTCTGCATGGTAAAACAAG+AGG + Chr3:96482612-96482631 None:intergenic 35.0%
! AAAAATCAAGATAAGCGCTG+AGG + Chr3:96483478-96483497 None:intergenic 35.0%
! AAAATGCTGTAGATTTTGCG+CGG - Chr3:96484703-96484722 MsG0380017457.01.T01:intron 35.0%
! GAAAGGCATAAATCTGATTG+AGG - Chr3:96484201-96484220 MsG0380017457.01.T01:CDS 35.0%
! GTTTTTACAGCTGACAAGAA+TGG - Chr3:96483784-96483803 MsG0380017457.01.T01:intron 35.0%
! TTTTGGTCTGCTACAAAAGT+TGG - Chr3:96484234-96484253 MsG0380017457.01.T01:intron 35.0%
!! AAAATCAAGATAAGCGCTGA+GGG + Chr3:96483477-96483496 None:intergenic 35.0%
!! AGGCTTTGAAGAGAAAAAAG+TGG - Chr3:96484781-96484800 MsG0380017457.01.T01:CDS 35.0%
!! AGTTTTGTAGTCATGAGTTC+AGG + Chr3:96484621-96484640 None:intergenic 35.0%
!! ATAGATGGATTAGGATTTGG+AGG + Chr3:96482555-96482574 None:intergenic 35.0%
!! ATATTTCAAATGGCTTGGTC+AGG - Chr3:96483867-96483886 MsG0380017457.01.T01:intron 35.0%
!! ATTGAGGTTTGGGATCTTTT+TGG - Chr3:96484217-96484236 MsG0380017457.01.T01:intron 35.0%
!! GCAATAGATGGATTAGGATT+TGG + Chr3:96482558-96482577 None:intergenic 35.0%
ACACATCCTCCATATTTGAC+CGG + Chr3:96483277-96483296 None:intergenic 40.0%
AGATGCACCTTTACTAGCTA+TGG - Chr3:96483760-96483779 MsG0380017457.01.T01:intron 40.0%
AGATTGGGGAAGTGGAAAAT+TGG - Chr3:96482958-96482977 MsG0380017457.01.T01:CDS 40.0%
ATAGTCTGTTTGCAGAAAGG+CGG + Chr3:96484003-96484022 None:intergenic 40.0%
ATTCTGATGTTCTGCATCGA+TGG - Chr3:96483634-96483653 MsG0380017457.01.T01:intron 40.0%
CGAAAAGCAGAAGCAATAGA+TGG + Chr3:96482570-96482589 None:intergenic 40.0%
CGATGATAAAGATTTCCCAG+TGG - Chr3:96483956-96483975 MsG0380017457.01.T01:intron 40.0%
CTTAATGTTGCTCGAGCTAT+TGG - Chr3:96484540-96484559 MsG0380017457.01.T01:intron 40.0%
GAAGGAATGAAAGGCAAAGA+CGG - Chr3:96484576-96484595 MsG0380017457.01.T01:intron 40.0%
GAGGACGAATTTCTCATCAT+AGG - Chr3:96484648-96484667 MsG0380017457.01.T01:intron 40.0%
GCAAACAGACTATGCATTTG+CGG - Chr3:96484010-96484029 MsG0380017457.01.T01:intron 40.0%
GGGCTCAACAAACATATAGA+TGG - Chr3:96483329-96483348 MsG0380017457.01.T01:CDS 40.0%
GGTGTGAATTGTTTCAGTGA+AGG - Chr3:96482507-96482526 MsG0380017457.01.T01:CDS 40.0%
GTATTGCTTTACCTTTGGTG+TGG - Chr3:96483714-96483733 MsG0380017457.01.T01:intron 40.0%
TACAGCTGACAAGAATGGAT+AGG - Chr3:96483789-96483808 MsG0380017457.01.T01:intron 40.0%
TGCATAGTCTGTTTGCAGAA+AGG + Chr3:96484006-96484025 None:intergenic 40.0%
TGGATTCAGTTTGCAACCTT+AGG - Chr3:96483040-96483059 MsG0380017457.01.T01:intron 40.0%
TTCTCATCATAGGCTGTGAT+GGG - Chr3:96484658-96484677 MsG0380017457.01.T01:intron 40.0%
TTTCTCATCATAGGCTGTGA+TGG - Chr3:96484657-96484676 MsG0380017457.01.T01:intron 40.0%
! ACTCTTGTTATAGGAAGGTC+AGG - Chr3:96484083-96484102 MsG0380017457.01.T01:intron 40.0%
! CGAACAAGAGATTTTCTGCA+TGG + Chr3:96482624-96482643 None:intergenic 40.0%
! CTATATGTTTGTTGAGCCCA+TGG + Chr3:96483328-96483347 None:intergenic 40.0%
! GCAGAAGCAATAGATGGATT+AGG + Chr3:96482564-96482583 None:intergenic 40.0%
! GCGCAAAATCTACAGCATTT+TGG + Chr3:96484704-96484723 None:intergenic 40.0%
! TCAGAGGAAGAGCATGAAAA+TGG + Chr3:96484269-96484288 None:intergenic 40.0%
! TGGCTACTCTTGTTATAGGA+AGG - Chr3:96484078-96484097 MsG0380017457.01.T01:intron 40.0%
!! GCATTGGCTACTCTTGTTAT+AGG - Chr3:96484074-96484093 MsG0380017457.01.T01:intron 40.0%
!! TGTCAATTGCTTTTCCACGA+CGG + Chr3:96484428-96484447 None:intergenic 40.0%
!!! GCATGTTTTGGAAGTACGAA+AGG - Chr3:96484184-96484203 MsG0380017457.01.T01:CDS 40.0%
!!! TGTGTTGACAGTTTTAGGCA+GGG - Chr3:96483302-96483321 MsG0380017457.01.T01:CDS 40.0%
!!! TTGTGTTGACAGTTTTAGGC+AGG - Chr3:96483301-96483320 MsG0380017457.01.T01:CDS 40.0%
AAATCCTTACTGCACACAGC+TGG + Chr3:96484753-96484772 None:intergenic 45.0%
AACAAGAGTAGCCAATGCAG+TGG + Chr3:96484072-96484091 None:intergenic 45.0%
AATCCTTACTGCACACAGCT+GGG + Chr3:96484752-96484771 None:intergenic 45.0%
AGCTGTGTGCAGTAAGGATT+TGG - Chr3:96484752-96484771 MsG0380017457.01.T01:CDS 45.0%
AGTTTCTGACTGTAGGTTGC+TGG - Chr3:96484365-96484384 MsG0380017457.01.T01:intron 45.0%
ATCTGCTGAGGATGTTACGA+AGG - Chr3:96483194-96483213 MsG0380017457.01.T01:intron 45.0%
ATGGGCCAAGTGCTTTCTAT+GGG - Chr3:96483348-96483367 MsG0380017457.01.T01:CDS 45.0%
ATGTCAAGAGACCACAAACC+AGG - Chr3:96484447-96484466 MsG0380017457.01.T01:intron 45.0%
GGTTTCTTACAAGAGAAGCG+TGG + Chr3:96482647-96482666 None:intergenic 45.0%
GTTGTCTGATGTATCTGCTG+AGG - Chr3:96483182-96483201 MsG0380017457.01.T01:intron 45.0%
TATCGGGTTCCGGTCAAATA+TGG - Chr3:96483265-96483284 MsG0380017457.01.T01:intron 45.0%
TGGCACATGGAAGGAATGAA+AGG - Chr3:96484567-96484586 MsG0380017457.01.T01:intron 45.0%
! CAGTAAGGATTTGGTTGACG+AGG - Chr3:96484761-96484780 MsG0380017457.01.T01:CDS 45.0%
! CATAGGCTGTGATGGGATTT+GGG - Chr3:96484665-96484684 MsG0380017457.01.T01:intron 45.0%
! CTTTCATGCAACCTGGTTTG+TGG + Chr3:96484461-96484480 None:intergenic 45.0%
! TCATAGGCTGTGATGGGATT+TGG - Chr3:96484664-96484683 MsG0380017457.01.T01:intron 45.0%
! TTCTGCATCGATGGCATCTT+CGG - Chr3:96483643-96483662 MsG0380017457.01.T01:intron 45.0%
!! ATAATGATGGCGGGTTGGTT+TGG - Chr3:96482933-96482952 MsG0380017457.01.T01:CDS 45.0%
!! GCTTTGGAAGGAAATCAGAC+TGG + Chr3:96483223-96483242 None:intergenic 45.0%
!! GTGAAATAATGATGGCGGGT+TGG - Chr3:96482928-96482947 MsG0380017457.01.T01:CDS 45.0%
CAGGTTGCATGAAAGAGCAG+AGG - Chr3:96484466-96484485 MsG0380017457.01.T01:intron 50.0%
CTCTGCTCTTTCATGCAACC+TGG + Chr3:96484468-96484487 None:intergenic 50.0%
GACTACAAAACTCACTGCCG+AGG - Chr3:96484629-96484648 MsG0380017457.01.T01:intron 50.0%
GATGGGCCAAGTGCTTTCTA+TGG - Chr3:96483347-96483366 MsG0380017457.01.T01:CDS 50.0%
GGAATGAAAGGCAAAGACGG+TGG - Chr3:96484579-96484598 MsG0380017457.01.T01:intron 50.0%
GTTTGGTCAGATTGGGGAAG+TGG - Chr3:96482950-96482969 MsG0380017457.01.T01:CDS 50.0%
TATCAGCACATCCTCCGGAA+CGG + Chr3:96483247-96483266 None:intergenic 50.0%
TGCACATTGGTCCACACCAA+AGG + Chr3:96483728-96483747 None:intergenic 50.0%
TGGGCCAAGTGCTTTCTATG+GGG - Chr3:96483349-96483368 MsG0380017457.01.T01:CDS 50.0%
TTCCTTCCAAAGCTCCGTTC+CGG - Chr3:96483230-96483249 MsG0380017457.01.T01:intron 50.0%
TTCTGACTGTAGGTTGCTGG+TGG - Chr3:96484368-96484387 MsG0380017457.01.T01:intron 50.0%
! AGCTATTGGTGACTGGCACA+TGG - Chr3:96484554-96484573 MsG0380017457.01.T01:intron 50.0%
! ATTGGTGACTGGCACATGGA+AGG - Chr3:96484558-96484577 MsG0380017457.01.T01:intron 50.0%
! GAAAGAGCAGAGGCGTATTG+AGG - Chr3:96484476-96484495 MsG0380017457.01.T01:intron 50.0%
! GATGTGCTGATATCGGGTTC+CGG - Chr3:96483255-96483274 MsG0380017457.01.T01:intron 50.0%
! TCCGGAGGATGTGCTGATAT+CGG - Chr3:96483248-96483267 MsG0380017457.01.T01:intron 50.0%
! TTGCTCGAGCTATTGGTGAC+TGG - Chr3:96484547-96484566 MsG0380017457.01.T01:intron 50.0%
!! ATGGCTTGGTCAGGTGTTGA+TGG - Chr3:96483876-96483895 MsG0380017457.01.T01:intron 50.0%
!! CGGGTTGGTTTGGTCAGATT+GGG - Chr3:96482943-96482962 MsG0380017457.01.T01:CDS 50.0%
!! GAGACCCCATAGAAAGCACT+TGG + Chr3:96483356-96483375 None:intergenic 50.0%
!! GGGTTGGTTTGGTCAGATTG+GGG - Chr3:96482944-96482963 MsG0380017457.01.T01:CDS 50.0%
!! TGGTCAGGTGTTGATGGACA+CGG - Chr3:96483882-96483901 MsG0380017457.01.T01:intron 50.0%
!!! ACAGTTTTAGGCAGGGCCAT+GGG - Chr3:96483309-96483328 MsG0380017457.01.T01:CDS 50.0%
AGAGAAGCTCCTGTGCACTC+TGG + Chr3:96484875-96484894 None:intergenic 55.0%
AGTAGCCAATGCAGTGGTGC+CGG + Chr3:96484066-96484085 None:intergenic 55.0%
AGTTCAGGCTCTGCACTGAG+TGG + Chr3:96484606-96484625 None:intergenic 55.0%
CCCGATATCAGCACATCCTC+CGG + Chr3:96483252-96483271 None:intergenic 55.0%
CGGGTTCCGGTCAAATATGG+AGG - Chr3:96483268-96483287 MsG0380017457.01.T01:intron 55.0%
CTCAATGCTGCCCTTGCATC+CGG - Chr3:96484044-96484063 MsG0380017457.01.T01:intron 55.0%
GAGCGTGGCGCTACCAAATT+CGG + Chr3:96484853-96484872 None:intergenic 55.0%
TCTGGAGGGTCTGTCTACGA+TGG - Chr3:96484501-96484520 MsG0380017457.01.T01:intron 55.0%
TGACTGTAGGTTGCTGGTGG+TGG - Chr3:96484371-96484390 MsG0380017457.01.T01:intron 55.0%
! AGGCGTATTGAGGCATCTGG+AGG - Chr3:96484486-96484505 MsG0380017457.01.T01:intron 55.0%
! CAGAGGCGTATTGAGGCATC+TGG - Chr3:96484483-96484502 MsG0380017457.01.T01:intron 55.0%
! CCGGAGGATGTGCTGATATC+GGG - Chr3:96483249-96483268 MsG0380017457.01.T01:intron 55.0%
! GGCGTATTGAGGCATCTGGA+GGG - Chr3:96484487-96484506 MsG0380017457.01.T01:intron 55.0%
!! GCGGGTTGGTTTGGTCAGAT+TGG - Chr3:96482942-96482961 MsG0380017457.01.T01:CDS 55.0%
!! TCAGGTGTTGATGGACACGG+CGG - Chr3:96483885-96483904 MsG0380017457.01.T01:intron 55.0%
!! TTGCTGGTGGTGGCAAATGC+TGG - Chr3:96484381-96484400 MsG0380017457.01.T01:intron 55.0%
!!! GACAGTTTTAGGCAGGGCCA+TGG - Chr3:96483308-96483327 MsG0380017457.01.T01:CDS 55.0%
CATCCTCCGGAACGGAGCTT+TGG + Chr3:96483239-96483258 None:intergenic 60.0%
CGACCCAGCTGTGTGCAGTA+AGG - Chr3:96484746-96484765 MsG0380017457.01.T01:CDS 60.0%
CGTGGCGCTACCAAATTCGG+TGG + Chr3:96484850-96484869 None:intergenic 60.0%
CTTCCAAAGCTCCGTTCCGG+AGG - Chr3:96483233-96483252 MsG0380017457.01.T01:intron 60.0%
GCAGCAGCCTCCACCGAATT+TGG - Chr3:96484837-96484856 MsG0380017457.01.T01:CDS 60.0%
TGCATCCGGCACCACTGCAT+TGG - Chr3:96484058-96484077 MsG0380017457.01.T01:intron 60.0%
! ATGCAGTGGTGCCGGATGCA+AGG + Chr3:96484058-96484077 None:intergenic 60.0%
! CTGTAGATTTTGCGCGGCGC+AGG - Chr3:96484709-96484728 MsG0380017457.01.T01:intron 60.0%
! GGCGCTACCAAATTCGGTGG+AGG + Chr3:96484847-96484866 None:intergenic 60.0%
! TGCAGTGGTGCCGGATGCAA+GGG + Chr3:96484057-96484076 None:intergenic 60.0%
!! CTCCGGAACGGAGCTTTGGA+AGG + Chr3:96483235-96483254 None:intergenic 60.0%
CGAGCAGTGTTGTGCCGTCG+TGG - Chr3:96484411-96484430 MsG0380017457.01.T01:intron 65.0%
! TTTTGCGCGGCGCAGGCTTC+AGG - Chr3:96484716-96484735 MsG0380017457.01.T01:intron 65.0%
!! CTCCTGTGCACTCTGGAGCG+TGG + Chr3:96484868-96484887 None:intergenic 65.0%
CGCCACGCTCCAGAGTGCAC+AGG - Chr3:96484863-96484882 MsG0380017457.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 96482492 96484899 96482492 ID=MsG0380017457.01;Name=MsG0380017457.01
Chr3 mRNA 96482492 96484899 96482492 ID=MsG0380017457.01.T01;Parent=MsG0380017457.01;Name=MsG0380017457.01.T01;_AED=0.21;_eAED=0.30;_QI=0|0|0|1|0.66|0.75|4|0|340
Chr3 exon 96484735 96484899 96484735 ID=MsG0380017457.01.T01:exon:13085;Parent=MsG0380017457.01.T01
Chr3 exon 96484097 96484223 96484097 ID=MsG0380017457.01.T01:exon:13084;Parent=MsG0380017457.01.T01
Chr3 exon 96483292 96483502 96483292 ID=MsG0380017457.01.T01:exon:13083;Parent=MsG0380017457.01.T01
Chr3 exon 96482492 96483011 96482492 ID=MsG0380017457.01.T01:exon:13082;Parent=MsG0380017457.01.T01
Chr3 CDS 96484735 96484899 96484735 ID=MsG0380017457.01.T01:cds;Parent=MsG0380017457.01.T01
Chr3 CDS 96484097 96484223 96484097 ID=MsG0380017457.01.T01:cds;Parent=MsG0380017457.01.T01
Chr3 CDS 96483292 96483502 96483292 ID=MsG0380017457.01.T01:cds;Parent=MsG0380017457.01.T01
Chr3 CDS 96482492 96483011 96482492 ID=MsG0380017457.01.T01:cds;Parent=MsG0380017457.01.T01
Gene Sequence

>MsG0380017457.01.T01

ATGGAAGAAATTGAAGGTGTGAATTGTTTCAGTGAAGGTAGAAGCTCTAGTGAGAGTCGACCTCCAAATCCTAATCCATCTATTGCTTCTGCTTTTCGTCAATGTCAACGCAATGATCCTCTTGTTTTACCATGCAGAAAATCTCTTGTTCGCCACGCTTCTCTTCAGACGAAAATGAAGTTGTCTGATGTATCTGCTGAGGATGTTACGAAGGTTGCCAGTCTGATTTCCTTCCAAAGCTCCGTTCCGGAGGATGTGCTGATATCGGGTTCCGGTCAAATATGGAGGATGTGTGTTGATGGACACGGCGGAAAGCATGCTGCTGACTTTGCTTGCAATCATTTGCCAAAGTTCATTCTCGATGATAAAGATTTCCCAGTGGATATTGAAAGGATAGTTGCTTCCGCCTTTCTGCAAACAGACTATGCATTTGCGGAAGCTTGTTCTCTCAATGCTGCCCTTGCATCCGGCACCACTGCATTGGCTACTCTTGTTATAGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGTTGTGCCGTCGTGGAAAAGCAATTGACATGTCAAGAGACCACAAACCAGGTTGCATGAAAGAGCAGAGGCGTATTGAGGCATCTGGAGGGTCTGTCTACGATGGATATCTTAACGGGCAACTTAATGTTGCTCGAGCTATTGGTGACTGGCACATGGAAGGAATGAAAGGCAAAGACGGTGGACCACTCAGTGCAGAGCCTGAACTCATGACTACAAAACTCACTGCCGAGGACGAATTTCTCATCATAGGCTGTGATGGGATTTGGGATGTTTTTAGAAGCCAAAATGCTGTAGATTTTGCGCGGCGCAGGCTTCAGGAGCATAACGACCCAGCTGTGTGCAGTAAGGATTTGGTTGACGAGGCTTTGAAGAGAAAAAAGTGGAGACAATTTAGCTGTTGTTGTGGTTTGCTTTCAGCAGCAGCCTCCACCGAATTTGGTAGCGCCACGCTCCAGAGTGCACAGGAGCTTCTCTGCTGA
Protein sequence

>MsG0380017457.01.T01

MEEIEGVNCFSEGRSSSESRPPNPNPSIASAFRQCQRNDPLVLPCRKSLVRHASLQTKMKLSDVSAEDVTKVASLISFQSSVPEDVLISGSGQIWRMCVDGHGGKHAADFACNHLPKFILDDKDFPVDIERIVASAFLQTDYAFAEACSLNAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIDMSRDHKPGCMKEQRRIEASGGSVYDGYLNGQLNVARAIGDWHMEGMKGKDGGPLSAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAVCSKDLVDEALKRKKWRQFSCCCGLLSAAASTEFGSATLQSAQELLC*