AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017560.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017560.01.T01 MTR_3g109070 99.691 324 1 0 1 324 1 324 0.0 645
MsG0380017560.01.T01 MTR_3g109070 99.630 270 1 0 1 270 1 270 0.0 531
MsG0380017560.01.T01 MTR_3g109070 99.550 222 1 0 1 222 1 222 4.09e-158 442
MsG0380017560.01.T01 MTR_2g085160 27.835 291 191 4 33 306 40 328 4.21e-25 103
MsG0380017560.01.T01 MTR_2g085160 28.511 235 166 1 72 306 37 269 7.88e-24 99.0
MsG0380017560.01.T01 MTR_5g091610 86.000 50 7 0 222 271 192 241 1.29e-18 84.3
MsG0380017560.01.T01 MTR_1g012590 28.696 230 147 4 18 232 41 268 6.38e-18 82.8
MsG0380017560.01.T01 MTR_1g012590 28.507 221 137 4 18 217 41 261 2.27e-17 80.9
MsG0380017560.01.T01 MTR_3g463360 24.904 261 185 4 16 267 103 361 2.07e-15 76.6
MsG0380017560.01.T01 MTR_4g113270 28.077 260 163 7 20 265 18 267 3.92e-13 69.7
MsG0380017560.01.T01 MTR_4g113270 28.077 260 163 7 20 265 18 267 4.63e-13 69.3
MsG0380017560.01.T01 MTR_2g094640 23.077 312 224 8 7 311 2 304 1.62e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017560.01.T01 AT4G31600 81.481 324 59 1 1 324 1 323 0.0 536
MsG0380017560.01.T01 AT4G31600 80.531 226 43 1 1 226 1 225 1.04e-126 365
MsG0380017560.01.T01 AT2G14695 28.840 319 208 6 4 306 29 344 2.70e-33 125
MsG0380017560.01.T01 AT4G32272 30.565 301 193 6 18 304 42 340 3.40e-33 125
MsG0380017560.01.T01 AT4G32272 30.272 294 189 6 25 304 64 355 2.12e-31 121
MsG0380017560.01.T01 AT5G19980 25.740 338 213 11 4 323 5 322 6.12e-12 66.2

Find 109 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCTTTGGTTTCTTCTTAC+TGG 0.055823 3:-97883557 MsG0380017560.01.T01:CDS
TATGAGAAATTTAACAAAAT+AGG 0.212327 3:+97886983 None:intergenic
AATAATACAGATAAAGAATA+TGG 0.225037 3:+97884834 None:intergenic
ACGATTGTGGGTGTTCTTAA+AGG 0.250800 3:-97883754 MsG0380017560.01.T01:CDS
AATGACTCTCCTCACTTTGC+AGG 0.263355 3:-97886562 MsG0380017560.01.T01:intron
AAGCGGTGTAAGCCTCTTTA+TGG 0.268525 3:+97885866 None:intergenic
GAAGAGGTAGTATAAATTAA+TGG 0.269351 3:+97887006 None:intergenic
TTATTGTTTCTTCAGACCTT+TGG 0.300445 3:-97883571 MsG0380017560.01.T01:intron
ATGAGAAATTTAACAAAATA+GGG 0.307525 3:+97886984 None:intergenic
CCATCACCAACGAAAGAATA+AGG 0.367155 3:+97883836 None:intergenic
AAGAGCAAGAGGGGTAGATT+TGG 0.380015 3:-97885988 MsG0380017560.01.T01:CDS
TGCCAATGTCGCATTTGCTT+TGG 0.382847 3:-97885925 MsG0380017560.01.T01:CDS
CCTTATTCTTTCGTTGGTGA+TGG 0.391406 3:-97883836 MsG0380017560.01.T01:CDS
ACCTTTGGTTTCTTCTTACT+GGG 0.392493 3:-97883556 MsG0380017560.01.T01:CDS
ACTTATCGCTGGATGTTTCA+TGG 0.394022 3:-97885838 MsG0380017560.01.T01:CDS
GAAACCATTACCTGAGTTGT+AGG 0.403057 3:+97885804 None:intergenic
GATATTGACTCCTTTCAAAC+TGG 0.405917 3:+97885902 None:intergenic
TTAATTGCGGCAGTGTCATA+TGG 0.413226 3:-97886645 MsG0380017560.01.T01:CDS
AAGCCATGCTATACCCAAAA+AGG 0.414547 3:+97885107 None:intergenic
AAGAGGTAGTATAAATTAAT+GGG 0.425120 3:+97887007 None:intergenic
GCTTTAACTACAACGATTGT+GGG 0.428116 3:-97883766 MsG0380017560.01.T01:CDS
GTGGGTGTTCTTAAAGGAGT+TGG 0.428224 3:-97883748 MsG0380017560.01.T01:CDS
TTGGATTTGATTACTTGATT+CGG 0.429172 3:-97886925 MsG0380017560.01.T01:five_prime_UTR
TAGATAGTTAAAGAGAGAGT+GGG 0.435996 3:+97887081 None:intergenic
GGTGATCCTTATTCTTTCGT+TGG 0.439674 3:-97883842 MsG0380017560.01.T01:CDS
CTCTTTATGGCAATATACAT+TGG 0.440204 3:+97885879 None:intergenic
CGCTGGATGTTTCATGGGGA+AGG 0.447004 3:-97885832 MsG0380017560.01.T01:CDS
TGCTTTAACTACAACGATTG+TGG 0.452237 3:-97883767 MsG0380017560.01.T01:CDS
TGTAAAATGATGAGAAAGAG+AGG 0.453726 3:+97883286 None:intergenic
ATAGATAGTTAAAGAGAGAG+TGG 0.454485 3:+97887080 None:intergenic
TCTTTATGGCAATATACATT+GGG 0.457891 3:+97885880 None:intergenic
CTTATTCTTTCGTTGGTGAT+GGG 0.460235 3:-97883835 MsG0380017560.01.T01:CDS
ATGTTTCTTATTATAGCCAC+AGG 0.466137 3:-97884864 MsG0380017560.01.T01:CDS
TCAGTGATATTGACTGCTGC+TGG 0.467406 3:-97885166 MsG0380017560.01.T01:CDS
CTTATCGCTGGATGTTTCAT+GGG 0.470441 3:-97885837 MsG0380017560.01.T01:CDS
AAAGAGAGAGTGGGGAGTAG+TGG 0.470699 3:+97887090 None:intergenic
GGAGGCTCATCGTAAATAGA+AGG 0.481581 3:-97883410 MsG0380017560.01.T01:exon
AACGGCCAAGCAACTGCTCC+CGG 0.482646 3:-97885964 MsG0380017560.01.T01:CDS
GTCATATGGAATTGCTTCAA+TGG 0.483225 3:-97886631 MsG0380017560.01.T01:CDS
TTCCACCAGCACAAGGTACA+TGG 0.486766 3:+97884962 None:intergenic
ACCACCTTGCTTATACACTT+TGG 0.489142 3:-97886029 MsG0380017560.01.T01:CDS
GTAGTATAAATTAATGGGTG+GGG 0.489312 3:+97887012 None:intergenic
GAAGGGGAGACCTACAACTC+AGG 0.497232 3:-97885814 MsG0380017560.01.T01:intron
AGCTGGCGTAAGAAGAGAAT+CGG 0.497545 3:+97887174 None:intergenic
CTGGATGTTTCATGGGGAAG+GGG 0.498074 3:-97885830 MsG0380017560.01.T01:CDS
CCCTAAAATCAGAGCAAAGA+TGG 0.498986 3:+97887232 None:intergenic
GTCCATGCTTTGAATGTGAC+TGG 0.500341 3:-97883523 MsG0380017560.01.T01:CDS
TGGAATTGCTTCAATGGCAA+TGG 0.506448 3:-97886625 MsG0380017560.01.T01:CDS
ATAATACAGATAAAGAATAT+GGG 0.509077 3:+97884835 None:intergenic
CCGCTTGCTGTACTTATCGC+TGG 0.512463 3:-97885849 MsG0380017560.01.T01:CDS
GGTAGTATAAATTAATGGGT+GGG 0.514050 3:+97887011 None:intergenic
AAGTAGATTCTGCATCGGTT+CGG 0.516441 3:+97886765 None:intergenic
TTTGCTTTGGCCAGTTTGAA+AGG 0.517782 3:-97885912 MsG0380017560.01.T01:CDS
GCAGACCATGTACCTTGTGC+TGG 0.517953 3:-97884967 MsG0380017560.01.T01:intron
GGAGTTCTCATAGCAGCCCT+TGG 0.520280 3:-97885145 MsG0380017560.01.T01:CDS
TAATCACAGAATCACATAGT+TGG 0.521165 3:-97883262 MsG0380017560.01.T01:three_prime_UTR
TGAAACCGGGAGCAGTTGCT+TGG 0.523462 3:+97885959 None:intergenic
GGCCAAAGCAAATGCGACAT+TGG 0.528052 3:+97885923 None:intergenic
AGATAGTTAAAGAGAGAGTG+GGG 0.533168 3:+97887082 None:intergenic
CAATGTATATTGCCATAAAG+AGG 0.533866 3:-97885878 MsG0380017560.01.T01:CDS
TTTATCTGTATTATTTGCAA+AGG 0.536255 3:-97884826 MsG0380017560.01.T01:intron
TAAAATGATGAGAAAGAGAG+GGG 0.546200 3:+97883288 None:intergenic
GCAACGCAAGGTGTGGTTGG+TGG 0.550232 3:+97887207 None:intergenic
AATTTAACAAAATAGGGAAG+AGG 0.551394 3:+97886990 None:intergenic
GCTGGATGTTTCATGGGGAA+GGG 0.557636 3:-97885831 MsG0380017560.01.T01:CDS
TGCTTTGAATGTGACTGGAT+TGG 0.558503 3:-97883518 MsG0380017560.01.T01:CDS
TCGACCAAAGTGTATAAGCA+AGG 0.561117 3:+97886025 None:intergenic
GGATTGGTCATCAATACAGC+TGG 0.566974 3:-97883502 MsG0380017560.01.T01:CDS
ATCGCAACGCAAGGTGTGGT+TGG 0.570919 3:+97887204 None:intergenic
AGTGATTTATGAAACACAGC+TGG 0.578065 3:+97887157 None:intergenic
GTAAAATGATGAGAAAGAGA+GGG 0.578258 3:+97883287 None:intergenic
AACAATAGTGCACAAGAACA+TGG 0.587407 3:+97883795 None:intergenic
ATCCAGTCACATTCAAAGCA+TGG 0.590853 3:+97883521 None:intergenic
TGGCAGTGCAGTGAAGCACA+CGG 0.593155 3:-97887261 MsG0380017560.01.T01:five_prime_UTR
TTTGGTTTCTTCTTACTGGG+TGG 0.593368 3:-97883553 MsG0380017560.01.T01:CDS
AGGTAGTATAAATTAATGGG+TGG 0.593434 3:+97887010 None:intergenic
ATGGGATACACAAGAGCAAG+AGG 0.593687 3:-97885999 MsG0380017560.01.T01:CDS
GGCATCATCATCGCAACGCA+AGG 0.597115 3:+97887195 None:intergenic
GACCATGTACCTTGTGCTGG+TGG 0.597252 3:-97884964 MsG0380017560.01.T01:CDS
AAATGATGAGAAAGAGAGGG+GGG 0.602293 3:+97883290 None:intergenic
GGGGAGAAGAAATAGTAAAG+AGG 0.605145 3:+97887031 None:intergenic
TCGATCTCATTAATCCGCCA+TGG 0.607556 3:-97886792 MsG0380017560.01.T01:exon
ATGTTGATGCAGTTTAATTG+CGG 0.617199 3:-97886658 MsG0380017560.01.T01:intron
AGTGAAGGTAGTTACAGATG+TGG 0.618611 3:-97883431 MsG0380017560.01.T01:CDS
GAAGGTAGTTACAGATGTGG+AGG 0.621484 3:-97883428 MsG0380017560.01.T01:CDS
TCTTAAAGGAGTTGGTTCCA+CGG 0.622906 3:-97883740 MsG0380017560.01.T01:intron
CATCATCGCAACGCAAGGTG+TGG 0.623867 3:+97887200 None:intergenic
TGTTTCTTATTATAGCCACA+GGG 0.625509 3:-97884863 MsG0380017560.01.T01:CDS
AAATGAAGTAGATTCTGCAT+CGG 0.629797 3:+97886760 None:intergenic
GGGATACACAAGAGCAAGAG+GGG 0.631770 3:-97885997 MsG0380017560.01.T01:CDS
GCAAACAAACCTGCAAAGTG+AGG 0.632689 3:+97886553 None:intergenic
GGCAGTGCAGTGAAGCACAC+GGG 0.634787 3:-97887260 MsG0380017560.01.T01:five_prime_UTR
TGGGATACACAAGAGCAAGA+GGG 0.636053 3:-97885998 MsG0380017560.01.T01:CDS
TCACATAGTTGGAGCCTCAG+AGG 0.640266 3:-97883251 MsG0380017560.01.T01:three_prime_UTR
TCAATACAGCTGGTGGTGTG+TGG 0.641527 3:-97883492 MsG0380017560.01.T01:CDS
TTATCGCTGGATGTTTCATG+GGG 0.645128 3:-97885836 MsG0380017560.01.T01:CDS
TGCATCGGTTCGGATCTCCA+TGG 0.657034 3:+97886775 None:intergenic
AAGAGGGGTAGATTTGGCAA+CGG 0.660709 3:-97885982 MsG0380017560.01.T01:CDS
CCAGCGATAAGTACAGCAAG+CGG 0.663001 3:+97885849 None:intergenic
AATGATGAGAAAGAGAGGGG+GGG 0.674479 3:+97883291 None:intergenic
GTTTCTTATTATAGCCACAG+GGG 0.683514 3:-97884862 MsG0380017560.01.T01:CDS
TTGGTCATCAATACAGCTGG+TGG 0.688538 3:-97883499 MsG0380017560.01.T01:CDS
TGAGAATGGACTTTCATCAG+TGG 0.688876 3:-97884928 MsG0380017560.01.T01:CDS
GTCAGTATACTATACCTCTG+AGG 0.696511 3:+97883237 None:intergenic
ACCAAAGTGTATAAGCAAGG+TGG 0.697760 3:+97886028 None:intergenic
ACCCAGTAAGAAGAAACCAA+AGG 0.700359 3:+97883555 None:intergenic
AAAATGATGAGAAAGAGAGG+GGG 0.711711 3:+97883289 None:intergenic
ATCGGTTCGGATCTCCATGG+CGG 0.726107 3:+97886778 None:intergenic
AGAATATGGGAATTCCCCTG+TGG 0.758937 3:+97884848 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGATTTTTTTTTTTTAAGT+AGG - Chr3:97884321-97884340 MsG0380017560.01.T01:intron 10.0%
!! AATAATACAGATAAAGAATA+TGG + Chr3:97885620-97885639 None:intergenic 15.0%
!! ATAAAAATCCTAAAACTAAT+TGG - Chr3:97883630-97883649 MsG0380017560.01.T01:intron 15.0%
!! ATAATAAGAAACATCAAAAA+CGG + Chr3:97885581-97885600 None:intergenic 15.0%
!! ATAATACAGATAAAGAATAT+GGG + Chr3:97885619-97885638 None:intergenic 15.0%
!! ATGAGAAATTTAACAAAATA+GGG + Chr3:97883470-97883489 None:intergenic 15.0%
!! ATTATACAATATAGACAAAT+AGG + Chr3:97886272-97886291 None:intergenic 15.0%
!! TATGAGAAATTTAACAAAAT+AGG + Chr3:97883471-97883490 None:intergenic 15.0%
!! TTTAAGTAGGTTTAAATTAA+GGG - Chr3:97884334-97884353 MsG0380017560.01.T01:intron 15.0%
!!! CAGAAAAAAGTATATATATT+TGG - Chr3:97884229-97884248 MsG0380017560.01.T01:intron 15.0%
!!! CTTTTTTCTGATTATATTTA+AGG + Chr3:97884219-97884238 None:intergenic 15.0%
!!! TTATTTTGAGTGAAAAAAAT+AGG + Chr3:97886032-97886051 None:intergenic 15.0%
!!! TTTTAAGTAGGTTTAAATTA+AGG - Chr3:97884333-97884352 MsG0380017560.01.T01:intron 15.0%
!! AAATACAAACAAAAGATGAA+TGG + Chr3:97886811-97886830 None:intergenic 20.0%
!! AAATGTAATGTTTGTTTGAT+TGG - Chr3:97885000-97885019 MsG0380017560.01.T01:intron 20.0%
!! AAGAGGTAGTATAAATTAAT+GGG + Chr3:97883447-97883466 None:intergenic 20.0%
!! AATCTTGTTGAAAGAAAAAT+AGG - Chr3:97886132-97886151 MsG0380017560.01.T01:intron 20.0%
!! AATGTAATGTTTGTTTGATT+GGG - Chr3:97885001-97885020 MsG0380017560.01.T01:intron 20.0%
!! ATCTTGTTGAAAGAAAAATA+GGG - Chr3:97886133-97886152 MsG0380017560.01.T01:intron 20.0%
!! GGAAAAACATACTTATATTT+AGG - Chr3:97884119-97884138 MsG0380017560.01.T01:intron 20.0%
!! TTCCCTAAAAAAAAAGAAAA+AGG + Chr3:97884103-97884122 None:intergenic 20.0%
!! TTTATCTGTATTATTTGCAA+AGG - Chr3:97885625-97885644 MsG0380017560.01.T01:intron 20.0%
!!! AGACCTTTTTCTTTTTTTTT+AGG - Chr3:97884097-97884116 MsG0380017560.01.T01:intron 20.0%
!!! ATTTTGATCTACTTACTATT+AGG - Chr3:97885857-97885876 MsG0380017560.01.T01:CDS 20.0%
!!! CTTTTATCTTAATGAATTTC+TGG - Chr3:97885118-97885137 MsG0380017560.01.T01:CDS 20.0%
!!! GACCTTTTTCTTTTTTTTTA+GGG - Chr3:97884098-97884117 MsG0380017560.01.T01:intron 20.0%
!!! TAAATATAAGCATTTTGGAA+AGG + Chr3:97884155-97884174 None:intergenic 20.0%
!!! TCAGTTCTAAATTATATCAT+TGG - Chr3:97886348-97886367 MsG0380017560.01.T01:intron 20.0%
!!! TTTCTGATTATATTTAAGGT+AGG + Chr3:97884215-97884234 None:intergenic 20.0%
!!! TTTTTTGTTTGTTAATGTCA+AGG - Chr3:97884684-97884703 MsG0380017560.01.T01:intron 20.0%
! AAAATCTCTTGATTAAACTG+TGG - Chr3:97884756-97884775 MsG0380017560.01.T01:intron 25.0%
! AAAGAGGTGAAATTGAAAAA+TGG + Chr3:97883407-97883426 None:intergenic 25.0%
! AAGCACAAAACATTTAGTAT+AGG + Chr3:97885889-97885908 None:intergenic 25.0%
! AATTTAACAAAATAGGGAAG+AGG + Chr3:97883464-97883483 None:intergenic 25.0%
! AGAACCTAATATTGATACAT+AGG - Chr3:97886779-97886798 MsG0380017560.01.T01:exon 25.0%
! AGCACAAAACATTTAGTATA+GGG + Chr3:97885888-97885907 None:intergenic 25.0%
! AGTGTAAACTCTACTAAAAT+TGG + Chr3:97885221-97885240 None:intergenic 25.0%
! ATGTAAGTGTAAACATGATT+TGG + Chr3:97884256-97884275 None:intergenic 25.0%
! CAACACTGAAGAATAAAAAA+AGG + Chr3:97883509-97883528 None:intergenic 25.0%
! CATTATAGAAAAATGAAACC+GGG + Chr3:97884508-97884527 None:intergenic 25.0%
! GAAGAGGTAGTATAAATTAA+TGG + Chr3:97883448-97883467 None:intergenic 25.0%
! GCATTATAGAAAAATGAAAC+CGG + Chr3:97884509-97884528 None:intergenic 25.0%
! GTATCTATTACTCCATTTAA+AGG + Chr3:97885420-97885439 None:intergenic 25.0%
! TATGCCTATGTATCAATATT+AGG + Chr3:97886786-97886805 None:intergenic 25.0%
! TCTTTATGGCAATATACATT+GGG + Chr3:97884574-97884593 None:intergenic 25.0%
! TTACTCCATTTAAAGGATTA+TGG + Chr3:97885413-97885432 None:intergenic 25.0%
! TTGAAAGAAAAATAGGGAAA+GGG - Chr3:97886139-97886158 MsG0380017560.01.T01:intron 25.0%
! TTGAATGAAGAAAGAATTGA+AGG + Chr3:97883733-97883752 None:intergenic 25.0%
! TTGGATTTGATTACTTGATT+CGG - Chr3:97883526-97883545 MsG0380017560.01.T01:CDS 25.0%
!! AATCTACTTCATTTTCTTCA+AGG - Chr3:97883700-97883719 MsG0380017560.01.T01:intron 25.0%
!! ATTTTTCCTTTGACCTTTTT+GGG - Chr3:97885331-97885350 MsG0380017560.01.T01:intron 25.0%
!! CAATTTTCAGAATCCATTTT+GGG + Chr3:97884938-97884957 None:intergenic 25.0%
!! TACTTTTCATGCTTATGTTT+AGG - Chr3:97884277-97884296 MsG0380017560.01.T01:intron 25.0%
!! TCAATTTTCAGAATCCATTT+TGG + Chr3:97884939-97884958 None:intergenic 25.0%
!! TTAATTTTGCCATGATAAGA+CGG - Chr3:97886225-97886244 MsG0380017560.01.T01:intron 25.0%
!! TTGTATAAACTTTGTTGTGA+TGG - Chr3:97886406-97886425 MsG0380017560.01.T01:intron 25.0%
!!! CTACAGTTGTATTTATTTTG+CGG - Chr3:97885172-97885191 MsG0380017560.01.T01:CDS 25.0%
!!! CTTTTTTTATTCTTCAGTGT+TGG - Chr3:97883507-97883526 MsG0380017560.01.T01:CDS 25.0%
!!! GAGTTATTCTTTTTCATTTC+TGG - Chr3:97886588-97886607 MsG0380017560.01.T01:CDS 25.0%
!!! GATCAAATCCAATTAGTTTT+AGG + Chr3:97883641-97883660 None:intergenic 25.0%
!!! TACAGTTGTATTTATTTTGC+GGG - Chr3:97885173-97885192 MsG0380017560.01.T01:CDS 25.0%
!!! TCATTTTCAGTTTTGACTTT+GGG - Chr3:97883586-97883605 MsG0380017560.01.T01:intron 25.0%
!!! TTCATTTTCAGTTTTGACTT+TGG - Chr3:97883585-97883604 MsG0380017560.01.T01:intron 25.0%
!!! TTTTGAGTGAAAAAAATAGG+TGG + Chr3:97886029-97886048 None:intergenic 25.0%
AAAGAAACTGCTAAAAGTCT+TGG - Chr3:97885824-97885843 MsG0380017560.01.T01:CDS 30.0%
AAATGAAGTAGATTCTGCAT+CGG + Chr3:97883694-97883713 None:intergenic 30.0%
AAATGCCAACATTCAAAACA+TGG + Chr3:97885697-97885716 None:intergenic 30.0%
AAATGCTTATATTTACGAGC+AGG - Chr3:97884160-97884179 MsG0380017560.01.T01:intron 30.0%
AATGCTTATATTTACGAGCA+GGG - Chr3:97884161-97884180 MsG0380017560.01.T01:intron 30.0%
ACAAATAGGTGTTCAATTAC+TGG + Chr3:97886258-97886277 None:intergenic 30.0%
AGAAGAATAAGAAGAACCAT+TGG - Chr3:97884834-97884853 MsG0380017560.01.T01:CDS 30.0%
AGGTAGTATAAATTAATGGG+TGG + Chr3:97883444-97883463 None:intergenic 30.0%
ATAAGAAGAACCATTGGTAA+CGG - Chr3:97884840-97884859 MsG0380017560.01.T01:CDS 30.0%
ATACACTTTGGTCGAAAAAT+GGG - Chr3:97884434-97884453 MsG0380017560.01.T01:intron 30.0%
ATAGATAGTTAAAGAGAGAG+TGG + Chr3:97883374-97883393 None:intergenic 30.0%
ATGTTGATGCAGTTTAATTG+CGG - Chr3:97883793-97883812 MsG0380017560.01.T01:CDS 30.0%
ATGTTTCTTATTATAGCCAC+AGG - Chr3:97885587-97885606 MsG0380017560.01.T01:intron 30.0%
CAATGTATATTGCCATAAAG+AGG - Chr3:97884573-97884592 MsG0380017560.01.T01:intron 30.0%
CTCTTTATGGCAATATACAT+TGG + Chr3:97884575-97884594 None:intergenic 30.0%
CTTGGTTAATGTTATGAAGA+GGG - Chr3:97884865-97884884 MsG0380017560.01.T01:CDS 30.0%
GAAAAAAAGTAAGACAGTGA+AGG - Chr3:97887005-97887024 MsG0380017560.01.T01:five_prime_UTR 30.0%
GAGTTTACACTCAATAGAAA+TGG - Chr3:97885230-97885249 MsG0380017560.01.T01:intron 30.0%
GCACAAAACATTTAGTATAG+GGG + Chr3:97885887-97885906 None:intergenic 30.0%
GTAAAATGATGAGAAAGAGA+GGG + Chr3:97887167-97887186 None:intergenic 30.0%
GTTGAAAGAAAAATAGGGAA+AGG - Chr3:97886138-97886157 MsG0380017560.01.T01:intron 30.0%
GTTGTCCATAATCCTTTAAA+TGG - Chr3:97885405-97885424 MsG0380017560.01.T01:intron 30.0%
TAAAATGATGAGAAAGAGAG+GGG + Chr3:97887166-97887185 None:intergenic 30.0%
TAATCACAGAATCACATAGT+TGG - Chr3:97887189-97887208 MsG0380017560.01.T01:five_prime_UTR 30.0%
TAGATAGTTAAAGAGAGAGT+GGG + Chr3:97883373-97883392 None:intergenic 30.0%
TATACACTTTGGTCGAAAAA+TGG - Chr3:97884433-97884452 MsG0380017560.01.T01:intron 30.0%
TCGAAACATTATTCCCAAAA+TGG - Chr3:97884922-97884941 MsG0380017560.01.T01:CDS 30.0%
TCTAGTGACAGAAAATTCTA+TGG + Chr3:97886762-97886781 None:intergenic 30.0%
TGTAAAATGATGAGAAAGAG+AGG + Chr3:97887168-97887187 None:intergenic 30.0%
TGTTTCTTATTATAGCCACA+GGG - Chr3:97885588-97885607 MsG0380017560.01.T01:intron 30.0%
TTCTGGTAGAATAGACATTA+TGG - Chr3:97885135-97885154 MsG0380017560.01.T01:CDS 30.0%
! AATTTAAGTTTGTGGGAACT+CGG - Chr3:97886091-97886110 MsG0380017560.01.T01:intron 30.0%
! CTGATTATATTTAAGGTAGG+AGG + Chr3:97884212-97884231 None:intergenic 30.0%
! GATTTTTCCTTTGACCTTTT+TGG - Chr3:97885330-97885349 MsG0380017560.01.T01:intron 30.0%
! GCTCGTAAATATAAGCATTT+TGG + Chr3:97884160-97884179 None:intergenic 30.0%
! GGATTCTGAAAATTGAAGAA+GGG - Chr3:97884943-97884962 MsG0380017560.01.T01:CDS 30.0%
! GGTAGTATAAATTAATGGGT+GGG + Chr3:97883443-97883462 None:intergenic 30.0%
! GTAGTATAAATTAATGGGTG+GGG + Chr3:97883442-97883461 None:intergenic 30.0%
! TAATTTTGCCATGATAAGAC+GGG - Chr3:97886226-97886245 MsG0380017560.01.T01:intron 30.0%
! TGGAGAGAATTTAAGTTTGT+GGG - Chr3:97886084-97886103 MsG0380017560.01.T01:intron 30.0%
! TGGATTCTGAAAATTGAAGA+AGG - Chr3:97884942-97884961 MsG0380017560.01.T01:CDS 30.0%
! TTATTGTTTCTTCAGACCTT+TGG - Chr3:97886880-97886899 MsG0380017560.01.T01:five_prime_UTR 30.0%
! TTGGAGAGAATTTAAGTTTG+TGG - Chr3:97886083-97886102 MsG0380017560.01.T01:intron 30.0%
! TTTCATTTCTGTTTTCTTCC+AGG - Chr3:97885365-97885384 MsG0380017560.01.T01:intron 30.0%
!!! ACAGTTGTATTTATTTTGCG+GGG - Chr3:97885174-97885193 MsG0380017560.01.T01:CDS 30.0%
!!! ATTTTTTGTCAGCTTAAGAG+AGG + Chr3:97885070-97885089 None:intergenic 30.0%
!!! TTTTTTGTCAGCTTAAGAGA+GGG + Chr3:97885069-97885088 None:intergenic 30.0%
AAAATAACACCTACCTGTTG+AGG - Chr3:97886045-97886064 MsG0380017560.01.T01:intron 35.0%
AAAATGATGAGAAAGAGAGG+GGG + Chr3:97887165-97887184 None:intergenic 35.0%
AACAATAGTGCACAAGAACA+TGG + Chr3:97886659-97886678 None:intergenic 35.0%
AGATAGTTAAAGAGAGAGTG+GGG + Chr3:97883372-97883391 None:intergenic 35.0%
AGTGATTTATGAAACACAGC+TGG + Chr3:97883297-97883316 None:intergenic 35.0%
CAAAATATCAGCATATCACC+TGG + Chr3:97885386-97885405 None:intergenic 35.0%
CTGTTCACTGCTGTAATATA+AGG + Chr3:97884975-97884994 None:intergenic 35.0%
CTTCTACCTACTAAGACTAT+TGG - Chr3:97885027-97885046 MsG0380017560.01.T01:intron 35.0%
GAAAAAGAATAACTCTGCGA+AGG + Chr3:97886583-97886602 None:intergenic 35.0%
GAAAATTCTATGGCAAACAC+AGG + Chr3:97886752-97886771 None:intergenic 35.0%
GCTTGGTTAATGTTATGAAG+AGG - Chr3:97884864-97884883 MsG0380017560.01.T01:CDS 35.0%
GCTTTAACTACAACGATTGT+GGG - Chr3:97886685-97886704 MsG0380017560.01.T01:intron 35.0%
GTCAAAGGAAAAATCTCCAA+GGG + Chr3:97885325-97885344 None:intergenic 35.0%
GTCATATGGAATTGCTTCAA+TGG - Chr3:97883820-97883839 MsG0380017560.01.T01:CDS 35.0%
GTTTCTTATTATAGCCACAG+GGG - Chr3:97885589-97885608 MsG0380017560.01.T01:intron 35.0%
TCTGAAAATTGAAGAAGGGA+AGG - Chr3:97884947-97884966 MsG0380017560.01.T01:CDS 35.0%
TGCTTTAACTACAACGATTG+TGG - Chr3:97886684-97886703 MsG0380017560.01.T01:intron 35.0%
TGGTCAACAAAGATCAAAGA+GGG - Chr3:97884776-97884795 MsG0380017560.01.T01:intron 35.0%
TTTCATGCTTATGTTTAGGC+TGG - Chr3:97884281-97884300 MsG0380017560.01.T01:intron 35.0%
! ACCTTTGGTTTCTTCTTACT+GGG - Chr3:97886895-97886914 MsG0380017560.01.T01:five_prime_UTR 35.0%
! ATGCTACCAATAGTCTTAGT+AGG + Chr3:97885036-97885055 None:intergenic 35.0%
! ATTTAAGTTTGTGGGAACTC+GGG - Chr3:97886092-97886111 MsG0380017560.01.T01:intron 35.0%
! CAATAGTCTTAGTAGGTAGA+AGG + Chr3:97885029-97885048 None:intergenic 35.0%
! CCATCTTTGCTCTGATTTTA+GGG - Chr3:97883219-97883238 MsG0380017560.01.T01:three_prime_UTR 35.0%
! CGTTCATAAACTAGCTTCAA+AGG + Chr3:97884727-97884746 None:intergenic 35.0%
! TAAGAAGAACCATTGGTAAC+GGG - Chr3:97884841-97884860 MsG0380017560.01.T01:CDS 35.0%
! TAGTATCTGATAACGTGACA+TGG - Chr3:97886488-97886507 MsG0380017560.01.T01:intron 35.0%
! TCATAAACTAGCTTCAAAGG+TGG + Chr3:97884724-97884743 None:intergenic 35.0%
! TCCATCTTTGCTCTGATTTT+AGG - Chr3:97883218-97883237 MsG0380017560.01.T01:three_prime_UTR 35.0%
!! CTTATTCTTTCGTTGGTGAT+GGG - Chr3:97886616-97886635 MsG0380017560.01.T01:CDS 35.0%
!! GATATTGACTCCTTTCAAAC+TGG + Chr3:97884552-97884571 None:intergenic 35.0%
!!! CAGTTGTATTTATTTTGCGG+GGG - Chr3:97885175-97885194 MsG0380017560.01.T01:CDS 35.0%
AAATGATGAGAAAGAGAGGG+GGG + Chr3:97887164-97887183 None:intergenic 40.0%
AAGCCATGCTATACCCAAAA+AGG + Chr3:97885347-97885366 None:intergenic 40.0%
ACCAAAGTGTATAAGCAAGG+TGG + Chr3:97884426-97884445 None:intergenic 40.0%
ACCACCTTGCTTATACACTT+TGG - Chr3:97884422-97884441 MsG0380017560.01.T01:intron 40.0%
ACCCAGTAAGAAGAAACCAA+AGG + Chr3:97886899-97886918 None:intergenic 40.0%
ACGATTGTGGGTGTTCTTAA+AGG - Chr3:97886697-97886716 MsG0380017560.01.T01:intron 40.0%
ACTTATCGCTGGATGTTTCA+TGG - Chr3:97884613-97884632 MsG0380017560.01.T01:intron 40.0%
AGTGAAGGTAGTTACAGATG+TGG - Chr3:97887020-97887039 MsG0380017560.01.T01:five_prime_UTR 40.0%
ATCCAGTCACATTCAAAGCA+TGG + Chr3:97886933-97886952 None:intergenic 40.0%
ATGATGCATGCTAAGTGTCT+TGG + Chr3:97884013-97884032 None:intergenic 40.0%
ATGCTTATGTTTAGGCTGGA+GGG - Chr3:97884285-97884304 MsG0380017560.01.T01:intron 40.0%
CCATCACCAACGAAAGAATA+AGG + Chr3:97886618-97886637 None:intergenic 40.0%
CCCTAAAATCAGAGCAAAGA+TGG + Chr3:97883222-97883241 None:intergenic 40.0%
CTTATCGCTGGATGTTTCAT+GGG - Chr3:97884614-97884633 MsG0380017560.01.T01:intron 40.0%
GAAACCATTACCTGAGTTGT+AGG + Chr3:97884650-97884669 None:intergenic 40.0%
GCTATACCCAAAAAGGTCAA+AGG + Chr3:97885340-97885359 None:intergenic 40.0%
GGGGAGAAGAAATAGTAAAG+AGG + Chr3:97883423-97883442 None:intergenic 40.0%
GGTCAAAGGAAAAATCTCCA+AGG + Chr3:97885326-97885345 None:intergenic 40.0%
GGTGATCCTTATTCTTTCGT+TGG - Chr3:97886609-97886628 MsG0380017560.01.T01:CDS 40.0%
GTCAGTATACTATACCTCTG+AGG + Chr3:97887217-97887236 None:intergenic 40.0%
GTGGTCAACAAAGATCAAAG+AGG - Chr3:97884775-97884794 MsG0380017560.01.T01:intron 40.0%
GTTCCTTTCTGTCGTATATC+AGG - Chr3:97885254-97885273 MsG0380017560.01.T01:intron 40.0%
TCACCTGATATACGACAGAA+AGG + Chr3:97885260-97885279 None:intergenic 40.0%
TCGACCAAAGTGTATAAGCA+AGG + Chr3:97884429-97884448 None:intergenic 40.0%
TGAAATTACCTGAGTGTGGT+GGG - Chr3:97886164-97886183 MsG0380017560.01.T01:intron 40.0%
TGGAATTGCTTCAATGGCAA+TGG - Chr3:97883826-97883845 MsG0380017560.01.T01:CDS 40.0%
TTAATTGCGGCAGTGTCATA+TGG - Chr3:97883806-97883825 MsG0380017560.01.T01:CDS 40.0%
TTATCGCTGGATGTTTCATG+GGG - Chr3:97884615-97884634 MsG0380017560.01.T01:intron 40.0%
TTTGCTTTGGCCAGTTTGAA+AGG - Chr3:97884539-97884558 MsG0380017560.01.T01:intron 40.0%
! ACCATAGCTTGCAACATATC+TGG - Chr3:97886441-97886460 MsG0380017560.01.T01:intron 40.0%
! CCATAGCTTGCAACATATCT+GGG - Chr3:97886442-97886461 MsG0380017560.01.T01:intron 40.0%
! CCTTATTCTTTCGTTGGTGA+TGG - Chr3:97886615-97886634 MsG0380017560.01.T01:CDS 40.0%
! GACCTTTGGTTTCTTCTTAC+TGG - Chr3:97886894-97886913 MsG0380017560.01.T01:five_prime_UTR 40.0%
! TCTTAAAGGAGTTGGTTCCA+CGG - Chr3:97886711-97886730 MsG0380017560.01.T01:intron 40.0%
! TGAGAATGGACTTTCATCAG+TGG - Chr3:97885523-97885542 MsG0380017560.01.T01:intron 40.0%
! TGCTTTGAATGTGACTGGAT+TGG - Chr3:97886933-97886952 MsG0380017560.01.T01:five_prime_UTR 40.0%
! TTTGGTTTCTTCTTACTGGG+TGG - Chr3:97886898-97886917 MsG0380017560.01.T01:five_prime_UTR 40.0%
!! AAGAAGAACCATTGGTAACG+GGG - Chr3:97884842-97884861 MsG0380017560.01.T01:CDS 40.0%
!! AAGTAGATTCTGCATCGGTT+CGG + Chr3:97883689-97883708 None:intergenic 40.0%
!! TATGAAGAGGGTGTTTAAGC+TGG - Chr3:97884877-97884896 MsG0380017560.01.T01:CDS 40.0%
!!! TGACCTTTTTGGGTATAGCA+TGG - Chr3:97885341-97885360 MsG0380017560.01.T01:intron 40.0%
AAACCTCTCAAACCAGACTG+AGG + Chr3:97885994-97886013 None:intergenic 45.0%
AAGAGCAAGAGGGGTAGATT+TGG - Chr3:97884463-97884482 MsG0380017560.01.T01:intron 45.0%
AAGAGGGGTAGATTTGGCAA+CGG - Chr3:97884469-97884488 MsG0380017560.01.T01:intron 45.0%
AAGCGGTGTAAGCCTCTTTA+TGG + Chr3:97884588-97884607 None:intergenic 45.0%
AATGACTCTCCTCACTTTGC+AGG - Chr3:97883889-97883908 MsG0380017560.01.T01:intron 45.0%
AATGATGAGAAAGAGAGGGG+GGG + Chr3:97887163-97887182 None:intergenic 45.0%
ACAAGGTACATGGTCTGCAT+AGG + Chr3:97885482-97885501 None:intergenic 45.0%
AGAATATGGGAATTCCCCTG+TGG + Chr3:97885606-97885625 None:intergenic 45.0%
AGCTGGCGTAAGAAGAGAAT+CGG + Chr3:97883280-97883299 None:intergenic 45.0%
ATAACACCTACCTGTTGAGG+AGG - Chr3:97886048-97886067 MsG0380017560.01.T01:intron 45.0%
ATGGGATACACAAGAGCAAG+AGG - Chr3:97884452-97884471 MsG0380017560.01.T01:intron 45.0%
CATGCTTATGTTTAGGCTGG+AGG - Chr3:97884284-97884303 MsG0380017560.01.T01:intron 45.0%
CCCAGATATGTTGCAAGCTA+TGG + Chr3:97886445-97886464 None:intergenic 45.0%
GAAATTACCTGAGTGTGGTG+GGG - Chr3:97886165-97886184 MsG0380017560.01.T01:intron 45.0%
GAAGGTAGTTACAGATGTGG+AGG - Chr3:97887023-97887042 MsG0380017560.01.T01:five_prime_UTR 45.0%
GAGACCTACAACTCAGGTAA+TGG - Chr3:97884643-97884662 MsG0380017560.01.T01:intron 45.0%
GAGTTGTCAGGCAACTCAAA+GGG - Chr3:97885935-97885954 MsG0380017560.01.T01:CDS 45.0%
GCAAACAAACCTGCAAAGTG+AGG + Chr3:97883901-97883920 None:intergenic 45.0%
GGAAAAGACCCGTCTTATCA+TGG + Chr3:97886237-97886256 None:intergenic 45.0%
GGAGGCTCATCGTAAATAGA+AGG - Chr3:97887041-97887060 MsG0380017560.01.T01:five_prime_UTR 45.0%
GGTGTGAAATTACCTGAGTG+TGG - Chr3:97886160-97886179 MsG0380017560.01.T01:intron 45.0%
GTGAAATTACCTGAGTGTGG+TGG - Chr3:97886163-97886182 MsG0380017560.01.T01:intron 45.0%
GTGGGTGTTCTTAAAGGAGT+TGG - Chr3:97886703-97886722 MsG0380017560.01.T01:intron 45.0%
TAACACCTACCTGTTGAGGA+GGG - Chr3:97886049-97886068 MsG0380017560.01.T01:intron 45.0%
TCGATCTCATTAATCCGCCA+TGG - Chr3:97883659-97883678 MsG0380017560.01.T01:intron 45.0%
TGCCAATGTCGCATTTGCTT+TGG - Chr3:97884526-97884545 MsG0380017560.01.T01:intron 45.0%
TGGGATACACAAGAGCAAGA+GGG - Chr3:97884453-97884472 MsG0380017560.01.T01:intron 45.0%
TTGGTCATCAATACAGCTGG+TGG - Chr3:97886952-97886971 MsG0380017560.01.T01:five_prime_UTR 45.0%
! CAGATTTTTCCACCAGCACA+AGG + Chr3:97885499-97885518 None:intergenic 45.0%
! CTTGTGCTGGTGGAAAAATC+TGG - Chr3:97885497-97885516 MsG0380017560.01.T01:intron 45.0%
! GAAAAATCTGGCGCTGAGAA+TGG - Chr3:97885509-97885528 MsG0380017560.01.T01:intron 45.0%
! GTCCATGCTTTGAATGTGAC+TGG - Chr3:97886928-97886947 MsG0380017560.01.T01:five_prime_UTR 45.0%
! TCAGTGATATTGACTGCTGC+TGG - Chr3:97885285-97885304 MsG0380017560.01.T01:intron 45.0%
!! CGCTGCCATGTTTTGAATGT+TGG - Chr3:97885689-97885708 MsG0380017560.01.T01:intron 45.0%
!! CTTTGAGTTGCCTGACAACT+CGG + Chr3:97885936-97885955 None:intergenic 45.0%
!! GGATTGGTCATCAATACAGC+TGG - Chr3:97886949-97886968 MsG0380017560.01.T01:five_prime_UTR 45.0%
AAAGAGAGAGTGGGGAGTAG+TGG + Chr3:97883364-97883383 None:intergenic 50.0%
AACACCTACCTGTTGAGGAG+GGG - Chr3:97886050-97886069 MsG0380017560.01.T01:intron 50.0%
AGTTTGTGGGAACTCGGGAT+TGG - Chr3:97886097-97886116 MsG0380017560.01.T01:intron 50.0%
CATGGTCTGCATAGGAGAGT+AGG + Chr3:97885474-97885493 None:intergenic 50.0%
CCAGCGATAAGTACAGCAAG+CGG + Chr3:97884605-97884624 None:intergenic 50.0%
CGAGTTGTCAGGCAACTCAA+AGG - Chr3:97885934-97885953 MsG0380017560.01.T01:CDS 50.0%
CTCTCAAACCAGACTGAGGA+GGG + Chr3:97885990-97886009 None:intergenic 50.0%
CTGGATGTTTCATGGGGAAG+GGG - Chr3:97884621-97884640 MsG0380017560.01.T01:intron 50.0%
GCTGGATGTTTCATGGGGAA+GGG - Chr3:97884620-97884639 MsG0380017560.01.T01:intron 50.0%
GCTTGTCTTTCCGAGTTGTC+AGG - Chr3:97885923-97885942 MsG0380017560.01.T01:CDS 50.0%
GGCCAAAGCAAATGCGACAT+TGG + Chr3:97884531-97884550 None:intergenic 50.0%
GGGATACACAAGAGCAAGAG+GGG - Chr3:97884454-97884473 MsG0380017560.01.T01:intron 50.0%
GTTTGTGGGAACTCGGGATT+GGG - Chr3:97886098-97886117 MsG0380017560.01.T01:intron 50.0%
TAACCAAGCCCCGTTACCAA+TGG + Chr3:97884853-97884872 None:intergenic 50.0%
TCACATAGTTGGAGCCTCAG+AGG - Chr3:97887200-97887219 MsG0380017560.01.T01:five_prime_UTR 50.0%
TCTCAAACCAGACTGAGGAG+GGG + Chr3:97885989-97886008 None:intergenic 50.0%
TTCCACCAGCACAAGGTACA+TGG + Chr3:97885492-97885511 None:intergenic 50.0%
! AGTTGGTTCCACGGTAAGCT+AGG - Chr3:97886720-97886739 MsG0380017560.01.T01:intron 50.0%
! TCAATACAGCTGGTGGTGTG+TGG - Chr3:97886959-97886978 MsG0380017560.01.T01:five_prime_UTR 50.0%
ACACCTACCTGTTGAGGAGG+GGG - Chr3:97886051-97886070 MsG0380017560.01.T01:intron 55.0%
ATCGCAACGCAAGGTGTGGT+TGG + Chr3:97883250-97883269 None:intergenic 55.0%
CATCATCGCAACGCAAGGTG+TGG + Chr3:97883254-97883273 None:intergenic 55.0%
CCTCTCAAACCAGACTGAGG+AGG + Chr3:97885991-97886010 None:intergenic 55.0%
CGCTGGATGTTTCATGGGGA+AGG - Chr3:97884619-97884638 MsG0380017560.01.T01:intron 55.0%
GAAGGGGAGACCTACAACTC+AGG - Chr3:97884637-97884656 MsG0380017560.01.T01:intron 55.0%
GACCATGTACCTTGTGCTGG+TGG - Chr3:97885487-97885506 MsG0380017560.01.T01:intron 55.0%
GCAGACCATGTACCTTGTGC+TGG - Chr3:97885484-97885503 MsG0380017560.01.T01:intron 55.0%
GGAGTTCTCATAGCAGCCCT+TGG - Chr3:97885306-97885325 MsG0380017560.01.T01:intron 55.0%
GGATCACTCCTAGCTTACCG+TGG + Chr3:97886731-97886750 None:intergenic 55.0%
GGCATCATCATCGCAACGCA+AGG + Chr3:97883259-97883278 None:intergenic 55.0%
TGAAACCGGGAGCAGTTGCT+TGG + Chr3:97884495-97884514 None:intergenic 55.0%
TGGCAGTGCAGTGAAGCACA+CGG - Chr3:97883190-97883209 MsG0380017560.01.T01:three_prime_UTR 55.0%
! ATTACCTGAGTGTGGTGGGG+TGG - Chr3:97886168-97886187 MsG0380017560.01.T01:intron 55.0%
! CCTCCTCAGTCTGGTTTGAG+AGG - Chr3:97885988-97886007 MsG0380017560.01.T01:CDS 55.0%
!! ATCGGTTCGGATCTCCATGG+CGG + Chr3:97883676-97883695 None:intergenic 55.0%
!! CCGCTTGCTGTACTTATCGC+TGG - Chr3:97884602-97884621 MsG0380017560.01.T01:intron 55.0%
!! GAACCATTGGTAACGGGGCT+TGG - Chr3:97884847-97884866 MsG0380017560.01.T01:CDS 55.0%
!! TGCATCGGTTCGGATCTCCA+TGG + Chr3:97883679-97883698 None:intergenic 55.0%
AACGGCCAAGCAACTGCTCC+CGG - Chr3:97884487-97884506 MsG0380017560.01.T01:intron 60.0%
ACCTACCTGTTGAGGAGGGG+GGG - Chr3:97886053-97886072 MsG0380017560.01.T01:intron 60.0%
CACCTACCTGTTGAGGAGGG+GGG - Chr3:97886052-97886071 MsG0380017560.01.T01:intron 60.0%
CAGACTGAGGAGGGGAAGAC+TGG + Chr3:97885981-97886000 None:intergenic 60.0%
CAGTCTTCCCCTCCTCAGTC+TGG - Chr3:97885979-97885998 MsG0380017560.01.T01:CDS 60.0%
CTTTCCACCCCACCACACTC+AGG + Chr3:97886175-97886194 None:intergenic 60.0%
GATGAGAAAGAGAGGGGGGG+CGG + Chr3:97887160-97887179 None:intergenic 60.0%
GCAACGCAAGGTGTGGTTGG+TGG + Chr3:97883247-97883266 None:intergenic 60.0%
GGCAGTGCAGTGAAGCACAC+GGG - Chr3:97883191-97883210 MsG0380017560.01.T01:three_prime_UTR 60.0%
ACCCCCCCTCCTCAACAGGT+AGG + Chr3:97886057-97886076 None:intergenic 65.0%
AGAAAGAGAGGGGGGGCGGA+GGG + Chr3:97887156-97887175 None:intergenic 65.0%
CTCAACCCCCCCTCCTCAAC+AGG + Chr3:97886061-97886080 None:intergenic 65.0%
CTGTTGAGGAGGGGGGGTTG+AGG - Chr3:97886059-97886078 MsG0380017560.01.T01:intron 65.0%
GAGGAGGGGGGGTTGAGGTT+TGG - Chr3:97886064-97886083 MsG0380017560.01.T01:intron 65.0%
GAGAAAGAGAGGGGGGGCGG+AGG + Chr3:97887157-97887176 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 97883188 97887285 97883188 ID=MsG0380017560.01;Name=MsG0380017560.01
Chr3 mRNA 97883188 97887285 97883188 ID=MsG0380017560.01.T01;Parent=MsG0380017560.01;Name=MsG0380017560.01.T01;_AED=0.34;_eAED=0.34;_QI=490|1|1|1|0.66|0.57|7|226|324
Chr3 exon 97883188 97883578 97883188 ID=MsG0380017560.01.T01:exon:25819;Parent=MsG0380017560.01.T01
Chr3 exon 97883741 97883884 97883741 ID=MsG0380017560.01.T01:exon:25818;Parent=MsG0380017560.01.T01
Chr3 exon 97884827 97884985 97884827 ID=MsG0380017560.01.T01:exon:25817;Parent=MsG0380017560.01.T01
Chr3 exon 97885087 97885197 97885087 ID=MsG0380017560.01.T01:exon:25816;Parent=MsG0380017560.01.T01
Chr3 exon 97885815 97886060 97885815 ID=MsG0380017560.01.T01:exon:25815;Parent=MsG0380017560.01.T01
Chr3 exon 97886563 97886668 97886563 ID=MsG0380017560.01.T01:exon:25814;Parent=MsG0380017560.01.T01
Chr3 exon 97886752 97887285 97886752 ID=MsG0380017560.01.T01:exon:25813;Parent=MsG0380017560.01.T01
Chr3 five_prime_UTR 97886796 97887285 97886796 ID=MsG0380017560.01.T01:five_prime_utr;Parent=MsG0380017560.01.T01
Chr3 CDS 97886752 97886795 97886752 ID=MsG0380017560.01.T01:cds;Parent=MsG0380017560.01.T01
Chr3 CDS 97886563 97886668 97886563 ID=MsG0380017560.01.T01:cds;Parent=MsG0380017560.01.T01
Chr3 CDS 97885815 97886060 97885815 ID=MsG0380017560.01.T01:cds;Parent=MsG0380017560.01.T01
Chr3 CDS 97885087 97885197 97885087 ID=MsG0380017560.01.T01:cds;Parent=MsG0380017560.01.T01
Chr3 CDS 97884827 97884985 97884827 ID=MsG0380017560.01.T01:cds;Parent=MsG0380017560.01.T01
Chr3 CDS 97883741 97883884 97883741 ID=MsG0380017560.01.T01:cds;Parent=MsG0380017560.01.T01
Chr3 CDS 97883414 97883578 97883414 ID=MsG0380017560.01.T01:cds;Parent=MsG0380017560.01.T01
Chr3 three_prime_UTR 97883188 97883413 97883188 ID=MsG0380017560.01.T01:three_prime_utr;Parent=MsG0380017560.01.T01
Gene Sequence

>MsG0380017560.01.T01

ATGGAGATCCGAACCGATGCAGAATCTACTTCATTTTCTTCAAGTTTAATTGCGGCAGTGTCATATGGAATTGCTTCAATGGCAATGGTTTTTATCAATAAAGCTGTTCTCATGCAGTATTCACATTCAATGACTCTCCTCACTTTGCAGCAACTAGTTACCACCTTGCTTATACACTTTGGTCGAAAAATGGGATACACAAGAGCAAGAGGGGTAGATTTGGCAACGGCCAAGCAACTGCTCCCGGTTTCATTTTTCTATAATGCCAATGTCGCATTTGCTTTGGCCAGTTTGAAAGGAGTCAATATCCCAATGTATATTGCCATAAAGAGGCTTACACCGCTTGCTGTACTTATCGCTGGATGTTTCATGGGGAAGGGGAGACCTACAACTCAGGTGACTCTCTCAGTGATATTGACTGCTGCTGGAGTTCTCATAGCAGCCCTTGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCATGGCTTTCATTTCTGTTTTCTTCCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGCGCTGAGAATGGACTTTCATCAGTGGAAATCATGTTCTACAACAGTTTTTTATCTCTTCCGTTTTTGATGTTTCTTATTATAGCCACAGGGGAATTCCCATATTCTTTATCTGTATTATTTGCAAAGAGTTATTCTTTTTCATTTCTGGTGATCCTTATTCTTTCGTTGGTGATGGGCATTGTTCTCAACTTCACCATGTTCTTGTGCACTATTGTTAATTCTGCTTTAACTACAACGATTGTGGGTGTTCTTAAAGGAGTTGGTTCCACGACCTTTGGTTTCTTCTTACTGGGTGGTGTTCAAGTCCATGCTTTGAATGTGACTGGATTGGTCATCAATACAGCTGGTGGTGTGTGGTATTCATATGCTAAATATCAGCAGAAAAAAAGTAAGACAGTGAAGGTAGTTACAGATGTGGAGGCTCATCGTAAATAG
Protein sequence

>MsG0380017560.01.T01

MEIRTDAESTSFSSSLIAAVSYGIASMAMVFINKAVLMQYSHSMTLLTLQQLVTTLLIHFGRKMGYTRARGVDLATAKQLLPVSFFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGCFMGKGRPTTQVTLSVILTAAGVLIAALGDFSFDLFGYSMAFISVFFQTMYLVLVEKSGAENGLSSVEIMFYNSFLSLPFLMFLIIATGEFPYSLSVLFAKSYSFSFLVILILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVGSTTFGFFLLGGVQVHALNVTGLVINTAGGVWYSYAKYQQKKSKTVKVVTDVEAHRK*