AlfalfaGEDB | MsG0580024293.01

M. sativa cultivar ZhongmuNo.1 / MsG0580024293.01

KEGG: -
GO: -
PFAM: PF03151

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024293.01.T01	XP_004503221.1	89.49	314	33	0	5	318	89	402	0	575

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024293.01.T01	Q5XF09	82.295	305	54	0	14	318	2	306	0	519

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024293.01.T01	A0A1S2YES8	89.490	314	33	0	5	318	89	402	0.0	575

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0380017560.01	MsG0580024293.01	PPI
MsG0380015550.01	MsG0580024293.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024293.01.T01	MTR_3g070000	89.062	320	33	2	1	318	1	320	0.0	573
MsG0580024293.01.T01	MTR_5g081710	82.237	304	54	0	15	318	1	304	0.0	514
MsG0580024293.01.T01	MTR_3g462070	75.748	301	73	0	18	318	5	305	1.32e-174	486
MsG0580024293.01.T01	MTR_4g018760	70.724	304	89	0	15	318	5	308	8.57e-158	444
MsG0580024293.01.T01	MTR_8g090130	69.388	294	88	2	26	318	15	307	1.59e-146	415
MsG0580024293.01.T01	MTR_4g101860	64.765	298	105	0	26	323	56	353	8.06e-132	379
MsG0580024293.01.T01	MTR_3g072380	32.646	291	194	1	27	317	19	307	1.27e-46	160
MsG0580024293.01.T01	MTR_1g030320	31.597	288	195	1	30	317	21	306	1.90e-45	158
MsG0580024293.01.T01	MTR_0011s0320	33.673	294	185	4	27	316	18	305	6.72e-38	138
MsG0580024293.01.T01	MTR_4g114360	34.122	296	181	5	27	316	18	305	1.65e-35	132
MsG0580024293.01.T01	MTR_3g107470	30.743	296	191	5	27	316	22	309	1.24e-29	116
MsG0580024293.01.T01	MTR_3g072380	33.143	175	112	2	27	196	19	193	1.68e-28	110
MsG0580024293.01.T01	MTR_7g110380	30.584	291	194	3	36	323	28	313	2.25e-28	113
MsG0580024293.01.T01	MTR_0662s0010	34.211	266	161	5	27	286	18	275	4.94e-28	110
MsG0580024293.01.T01	MTR_4g123900	29.021	286	195	3	36	318	24	304	3.71e-23	99.0
MsG0580024293.01.T01	MTR_2g070400	27.703	296	200	8	36	323	24	313	1.06e-21	94.0
MsG0580024293.01.T01	MTR_4g123900	28.727	275	188	3	36	307	24	293	1.63e-19	87.4
MsG0580024293.01.T01	MTR_6g005480	27.778	324	218	8	3	317	92	408	6.98e-19	87.0
MsG0580024293.01.T01	MTR_4g105630	25.000	292	209	4	30	317	92	377	7.65e-18	83.6
MsG0580024293.01.T01	MTR_8g016090	24.522	314	206	9	23	314	169	473	2.56e-17	82.8
MsG0580024293.01.T01	MTR_3g095130	25.347	288	207	4	33	319	24	304	6.86e-15	74.7
MsG0580024293.01.T01	MTR_4g088350	26.220	328	217	10	4	316	73	390	1.25e-14	74.3
MsG0580024293.01.T01	MTR_3g077640	24.768	323	230	6	2	317	86	402	2.35e-14	73.6
MsG0580024293.01.T01	MTR_5g044220	24.832	298	198	7	30	316	111	393	4.32e-14	72.8
MsG0580024293.01.T01	MTR_2g094640	24.183	306	210	6	17	313	2	294	1.11e-13	71.2
MsG0580024293.01.T01	MTR_3g049400	22.152	316	234	8	7	317	93	401	5.74e-13	69.3
MsG0580024293.01.T01	MTR_8g016090	26.549	226	139	6	107	314	207	423	1.04e-12	68.9
MsG0580024293.01.T01	MTR_2g038410	25.614	285	193	9	35	313	67	338	1.44e-12	68.2
MsG0580024293.01.T01	MTR_4g105630	23.551	276	201	4	30	301	92	361	4.95e-12	66.6
MsG0580024293.01.T01	MTR_8g092190	23.390	295	204	5	33	319	24	304	5.81e-12	66.2
MsG0580024293.01.T01	MTR_2g029180	24.315	292	205	9	30	314	110	392	8.24e-12	65.9
MsG0580024293.01.T01	MTR_2g022700	20.872	321	235	8	3	318	90	396	3.11e-11	64.3
MsG0580024293.01.T01	MTR_4g088350	25.275	273	190	6	52	318	15	279	4.45e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024293.01.T01	AT3G11320	82.295	305	54	0	14	318	2	306	0.0	519
MsG0580024293.01.T01	AT5G05820	80.519	308	60	0	14	321	2	309	0.0	511
MsG0580024293.01.T01	AT5G04160	65.033	306	106	1	13	318	3	307	1.51e-145	412
MsG0580024293.01.T01	AT3G10290	62.893	318	111	2	7	318	37	353	5.41e-144	410
MsG0580024293.01.T01	AT1G12500	63.455	301	110	0	18	318	54	354	1.66e-136	392
MsG0580024293.01.T01	AT1G21870	33.548	310	200	4	10	317	2	307	1.21e-49	169
MsG0580024293.01.T01	AT1G77610	34.138	290	185	4	30	317	16	301	3.04e-46	160
MsG0580024293.01.T01	AT5G25400	33.108	296	184	5	27	316	22	309	2.48e-34	129
MsG0580024293.01.T01	AT5G11230	33.446	296	183	5	27	316	22	309	1.13e-33	127
MsG0580024293.01.T01	AT4G32390	31.757	296	188	5	27	316	22	309	2.77e-30	118
MsG0580024293.01.T01	AT2G25520	32.770	296	185	5	27	316	22	309	4.76e-30	117
MsG0580024293.01.T01	AT3G17430	29.553	291	197	3	36	323	25	310	3.89e-26	107
MsG0580024293.01.T01	AT3G17430	29.553	291	197	3	36	323	25	310	3.89e-26	107
MsG0580024293.01.T01	AT1G48230	29.861	288	186	5	36	316	25	303	5.49e-23	98.2
MsG0580024293.01.T01	AT1G53660	28.475	295	192	7	36	322	30	313	7.98e-23	97.4
MsG0580024293.01.T01	AT3G14410	27.554	323	212	7	12	321	2	315	1.27e-22	97.1
MsG0580024293.01.T01	AT1G53660	28.475	295	192	7	36	322	48	331	1.31e-22	97.1
MsG0580024293.01.T01	AT1G53660	28.214	280	184	6	49	322	11	279	3.77e-21	92.0
MsG0580024293.01.T01	AT3G01550	26.769	325	225	6	1	317	54	373	5.28e-19	87.0
MsG0580024293.01.T01	AT1G53660	27.753	227	154	3	98	322	1	219	2.60e-18	83.2
MsG0580024293.01.T01	AT3G01550	26.687	326	219	8	1	317	54	368	1.19e-16	80.5
MsG0580024293.01.T01	AT1G48230	29.515	227	146	4	95	316	13	230	1.69e-16	79.0
MsG0580024293.01.T01	AT5G57100	26.332	319	207	11	8	318	54	352	3.89e-16	79.0
MsG0580024293.01.T01	AT5G17630	24.407	295	209	8	30	318	119	405	2.16e-15	77.0
MsG0580024293.01.T01	AT2G30460	25.850	294	194	9	41	323	29	309	2.15e-14	73.6
MsG0580024293.01.T01	AT2G30460	25.850	294	194	9	41	323	29	309	2.15e-14	73.6
MsG0580024293.01.T01	AT4G09810	24.116	311	224	5	13	319	2	304	1.11e-13	71.2
MsG0580024293.01.T01	AT5G46110	23.841	302	200	7	30	318	2	286	1.63e-13	70.5
MsG0580024293.01.T01	AT1G06470	23.377	308	216	6	23	316	75	376	1.69e-13	71.2
MsG0580024293.01.T01	AT1G06470	23.377	308	216	6	23	316	75	376	1.69e-13	71.2
MsG0580024293.01.T01	AT1G06470	23.377	308	216	6	23	316	75	376	1.69e-13	71.2
MsG0580024293.01.T01	AT1G06470	23.377	308	216	6	23	316	75	376	1.69e-13	71.2
MsG0580024293.01.T01	AT5G33320	24.038	312	226	5	10	316	94	399	1.98e-13	70.9
MsG0580024293.01.T01	AT5G46110	23.841	302	200	7	30	318	115	399	2.46e-13	70.5
MsG0580024293.01.T01	AT5G54800	21.767	317	235	8	6	316	78	387	2.88e-13	70.5
MsG0580024293.01.T01	AT1G61800	22.188	320	230	9	3	317	83	388	2.90e-13	70.5
MsG0580024293.01.T01	AT5G46110	23.841	302	200	7	30	318	115	399	2.93e-13	70.5
MsG0580024293.01.T01	AT4G39390	24.422	303	206	7	27	319	16	305	6.44e-13	68.9
MsG0580024293.01.T01	AT4G39390	24.422	303	206	7	27	319	20	309	7.31e-13	68.9
MsG0580024293.01.T01	AT4G39390	24.422	303	206	7	27	319	20	309	7.31e-13	68.9
MsG0580024293.01.T01	AT1G34020	23.529	289	213	3	33	320	24	305	1.04e-12	68.2
MsG0580024293.01.T01	AT1G34020	23.529	289	213	3	33	320	24	305	1.04e-12	68.2
MsG0580024293.01.T01	AT1G34020	23.529	289	213	3	33	320	24	305	1.04e-12	68.2
MsG0580024293.01.T01	AT1G61800	21.807	321	232	9	3	318	83	389	1.22e-12	68.6
MsG0580024293.01.T01	AT1G06890	23.810	294	200	9	41	323	29	309	3.27e-12	67.0
MsG0580024293.01.T01	AT1G06890	23.810	294	200	9	41	323	29	309	3.27e-12	67.0
MsG0580024293.01.T01	AT1G06890	23.810	294	200	9	41	323	29	309	3.59e-12	67.0
MsG0580024293.01.T01	AT1G06890	23.810	294	200	9	41	323	29	309	3.95e-12	66.6
MsG0580024293.01.T01	AT5G57100	27.650	217	135	9	8	217	54	255	5.81e-12	65.9
MsG0580024293.01.T01	AT5G46110	25.763	295	190	8	30	316	115	388	7.96e-11	63.2
MsG0580024293.01.T01	AT5G57100	27.778	198	123	8	8	200	54	236	9.52e-11	62.0

Find 55 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAACCGAGTTTCCATTTATT+TGG	0.218313	5:+3049142	MsG0580024293.01.T01:CDS
CTGGTGTGGTTATTGCTACT+TGG	0.239286	5:+3049116	MsG0580024293.01.T01:CDS
TTAGTTATGTTGCTATAGTA+TGG	0.265194	5:+3048855	MsG0580024293.01.T01:CDS
ACACTTATTCCTATTGTTAC+TGG	0.268384	5:+3049097	MsG0580024293.01.T01:CDS
ATATAATGAATCCAAATAAA+TGG	0.280751	5:-3049153	None:intergenic
CTATGCAAACTATTCAATCT+AGG	0.306434	5:+3048891	MsG0580024293.01.T01:CDS
AAGTACTTGCTAAGCACTTA+TGG	0.312790	5:+3048779	MsG0580024293.01.T01:CDS
GAGACGATGCCAAGATAATT+TGG	0.325829	5:+3049362	MsG0580024293.01.T01:CDS
TCTTCCCGCCACGCTGATAA+TGG	0.378864	5:+3049303	MsG0580024293.01.T01:CDS
GCTCTTACTCTTCAGGTACT+AGG	0.382139	5:+3049457	MsG0580024293.01.T01:CDS
ATCATTGGAATGATGGGTTA+TGG	0.386048	5:+3049541	MsG0580024293.01.T01:CDS
AATTATCTTGGCATCGTCTC+TGG	0.386673	5:-3049359	None:intergenic
TACCAGTGCTCTTACTCTTC+AGG	0.394484	5:+3049450	MsG0580024293.01.T01:CDS
TCAACCCGTTTCTTCACAAT+AGG	0.405982	5:+3048707	MsG0580024293.01.T01:CDS
AGTTTCAATCATTGGAATGA+TGG	0.412676	5:+3049534	MsG0580024293.01.T01:CDS
ACACGTTTCTGAAGATCAAA+AGG	0.426794	5:+3048667	MsG0580024293.01.T01:CDS
TGGTGTGGTTATTGCTACTT+GGG	0.439499	5:+3049117	MsG0580024293.01.T01:CDS
CAAGACCTATTGTGAAGAAA+CGG	0.448458	5:-3048712	None:intergenic
ATAACCACACCAGTAACAAT+AGG	0.453842	5:-3049106	None:intergenic
TAGAAGATACCAAATTATCT+TGG	0.461552	5:-3049371	None:intergenic
TCCTCCATTATCAGCGTGGC+GGG	0.472401	5:-3049307	None:intergenic
GTTTCAATCATTGGAATGAT+GGG	0.479024	5:+3049535	MsG0580024293.01.T01:CDS
AAGACCTATTGTGAAGAAAC+GGG	0.480038	5:-3048711	None:intergenic
CTGAATTATGAAGTATCACT+TGG	0.482218	5:-3049610	None:intergenic
ACGGGTTGAACCCTTCACTT+TGG	0.486318	5:-3048693	None:intergenic
TATGCAAACTATTCAATCTA+GGG	0.491327	5:+3048892	MsG0580024293.01.T01:CDS
AGAAGGAAAACCGCTGCCAT+TGG	0.498897	5:-3049283	None:intergenic
AATGAACCTCCTCCTTTACA+TGG	0.500628	5:+3049258	MsG0580024293.01.T01:CDS
CTCTTACTCTTCAGGTACTA+GGG	0.510964	5:+3049458	MsG0580024293.01.T01:CDS
TATTCCTATTGTTACTGGTG+TGG	0.516098	5:+3049102	MsG0580024293.01.T01:CDS
CCTCCTTTACATGGCTCCAA+TGG	0.517942	5:+3049267	MsG0580024293.01.T01:CDS
TTATCAGCGTGGCGGGAAGA+AGG	0.520531	5:-3049300	None:intergenic
CACGTTTCTGAAGATCAAAA+GGG	0.521726	5:+3048668	MsG0580024293.01.T01:CDS
CTGCCATTGGAGCCATGTAA+AGG	0.540504	5:-3049270	None:intergenic
CAATAGAAGAACACCAATGT+TGG	0.543450	5:-3048753	None:intergenic
TCAAAAGGGTTCCAAAGTGA+AGG	0.548308	5:+3048682	MsG0580024293.01.T01:CDS
TGGATTCATTATATGTGTTG+TGG	0.550391	5:+3049162	MsG0580024293.01.T01:CDS
TTACATGGCTCCAATGGCAG+CGG	0.564250	5:+3049273	MsG0580024293.01.T01:CDS
AATGATGGGTTATGGTCTCA+CGG	0.573512	5:+3049549	MsG0580024293.01.T01:CDS
CTAGATTGAATAGTTTGCAT+AGG	0.574629	5:-3048890	None:intergenic
TGTTGCTATAGTATGGATGA+AGG	0.582205	5:+3048862	MsG0580024293.01.T01:CDS
CAGGTACTAGGGAATGCTAA+AGG	0.585563	5:+3049469	MsG0580024293.01.T01:CDS
GCCCTAAAATCAGTACTACA+AGG	0.592696	5:+3049199	MsG0580024293.01.T01:CDS
GCATGGTACTCTTCCAACAT+TGG	0.596377	5:+3048740	MsG0580024293.01.T01:CDS
TTGGAGCCATGTAAAGGAGG+AGG	0.601453	5:-3049264	None:intergenic
CAAAAGGGTTCCAAAGTGAA+GGG	0.605571	5:+3048683	MsG0580024293.01.T01:CDS
TACCTGAAGAGTAAGAGCAC+TGG	0.610946	5:-3049452	None:intergenic
AATCCAAATAAATGGAAACT+CGG	0.623131	5:-3049145	None:intergenic
CCATTGGAGCCATGTAAAGG+AGG	0.626067	5:-3049267	None:intergenic
CAATAGGTCTTGTAGCAGCA+TGG	0.627130	5:+3048723	MsG0580024293.01.T01:CDS
TTCCTCCATTATCAGCGTGG+CGG	0.634729	5:-3049308	None:intergenic
TCCCGCCACGCTGATAATGG+AGG	0.635546	5:+3049306	MsG0580024293.01.T01:CDS
ATAGCCTGATTAAAAGACAC+AGG	0.649055	5:-3048995	None:intergenic
GGTGTGGTTATTGCTACTTG+GGG	0.684487	5:+3049118	MsG0580024293.01.T01:CDS
ACATGCTATCATGTGACACA+TGG	0.686909	5:-3048825	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATAATGAATCCAAATAAA+TGG	-	Chr5:3049156-3049175	None:intergenic	15.0%
!!!	AAACTGCATTTTTAAATATT+AGG	-	Chr5:3049519-3049538	None:intergenic	15.0%
!!	AGTCATAATATAAGCAAAAA+TGG	-	Chr5:3049047-3049066	None:intergenic	20.0%
!	AAAAATGCAGTTTCAATCAT+TGG	+	Chr5:3049526-3049545	MsG0580024293.01.T01:CDS	25.0%
!	AATCCAAATAAATGGAAACT+CGG	-	Chr5:3049148-3049167	None:intergenic	25.0%
!	CATAATATAAGCAAAAATGG+CGG	-	Chr5:3049044-3049063	None:intergenic	25.0%
!	TAGAAGATACCAAATTATCT+TGG	-	Chr5:3049374-3049393	None:intergenic	25.0%
!	TATGCAAACTATTCAATCTA+GGG	+	Chr5:3048892-3048911	MsG0580024293.01.T01:CDS	25.0%
!	TTAGTTATGTTGCTATAGTA+TGG	+	Chr5:3048855-3048874	MsG0580024293.01.T01:CDS	25.0%
!!	TTTTGTATTTCTCTTGTGTT+TGG	+	Chr5:3048950-3048969	MsG0580024293.01.T01:CDS	25.0%
!!!	ATTATGACTTTTAAGAGAGA+GGG	+	Chr5:3049058-3049077	MsG0580024293.01.T01:CDS	25.0%
!!!	TATTATGACTTTTAAGAGAG+AGG	+	Chr5:3049057-3049076	MsG0580024293.01.T01:CDS	25.0%
	ACACTTATTCCTATTGTTAC+TGG	+	Chr5:3049097-3049116	MsG0580024293.01.T01:CDS	30.0%
	AGTTTCAATCATTGGAATGA+TGG	+	Chr5:3049534-3049553	MsG0580024293.01.T01:CDS	30.0%
	ATGTTTCGTGACCAAAAAAT+TGG	-	Chr5:3049431-3049450	None:intergenic	30.0%
	CTATGCAAACTATTCAATCT+AGG	+	Chr5:3048891-3048910	MsG0580024293.01.T01:CDS	30.0%
	GACACATGGTAAGAAAAATA+GGG	-	Chr5:3048814-3048833	None:intergenic	30.0%
	GTTTCAATCATTGGAATGAT+GGG	+	Chr5:3049535-3049554	MsG0580024293.01.T01:CDS	30.0%
	TGACACATGGTAAGAAAAAT+AGG	-	Chr5:3048815-3048834	None:intergenic	30.0%
	TGGATTCATTATATGTGTTG+TGG	+	Chr5:3049162-3049181	MsG0580024293.01.T01:CDS	30.0%
!	CTAGATTGAATAGTTTGCAT+AGG	-	Chr5:3048893-3048912	None:intergenic	30.0%
!	TATTCCTGTGTCTTTTAATC+AGG	+	Chr5:3048991-3049010	MsG0580024293.01.T01:CDS	30.0%
!!!	TCCTTGTAGTACTGATTTTA+GGG	-	Chr5:3049203-3049222	None:intergenic	30.0%
!!!	TTCCTTGTAGTACTGATTTT+AGG	-	Chr5:3049204-3049223	None:intergenic	30.0%
	AAGACCTATTGTGAAGAAAC+GGG	-	Chr5:3048714-3048733	None:intergenic	35.0%
	ATAACCACACCAGTAACAAT+AGG	-	Chr5:3049109-3049128	None:intergenic	35.0%
	ATAGCCTGATTAAAAGACAC+AGG	-	Chr5:3048998-3049017	None:intergenic	35.0%
	CAAGACCTATTGTGAAGAAA+CGG	-	Chr5:3048715-3048734	None:intergenic	35.0%
	CAATAGAAGAACACCAATGT+TGG	-	Chr5:3048756-3048775	None:intergenic	35.0%
	GAACCGAGTTTCCATTTATT+TGG	+	Chr5:3049142-3049161	MsG0580024293.01.T01:CDS	35.0%
	TATTCCTATTGTTACTGGTG+TGG	+	Chr5:3049102-3049121	MsG0580024293.01.T01:CDS	35.0%
	TGTTGCTATAGTATGGATGA+AGG	+	Chr5:3048862-3048881	MsG0580024293.01.T01:CDS	35.0%
!	AAGTACTTGCTAAGCACTTA+TGG	+	Chr5:3048779-3048798	MsG0580024293.01.T01:CDS	35.0%
!	ACACGTTTCTGAAGATCAAA+AGG	+	Chr5:3048667-3048686	MsG0580024293.01.T01:CDS	35.0%
!	AGTATCACTTGGTCTCTTTT+TGG	-	Chr5:3049602-3049621	None:intergenic	35.0%
!	CACGTTTCTGAAGATCAAAA+GGG	+	Chr5:3048668-3048687	MsG0580024293.01.T01:CDS	35.0%
!	GTGTCTTTTAATCAGGCTAT+TGG	+	Chr5:3048998-3049017	MsG0580024293.01.T01:CDS	35.0%
!!	ATCATTGGAATGATGGGTTA+TGG	+	Chr5:3049541-3049560	MsG0580024293.01.T01:CDS	35.0%
!!!	TGTCAACCTGACCAATTTTT+TGG	+	Chr5:3049417-3049436	MsG0580024293.01.T01:CDS	35.0%
	AATGAACCTCCTCCTTTACA+TGG	+	Chr5:3049258-3049277	MsG0580024293.01.T01:CDS	40.0%
	AATTATCTTGGCATCGTCTC+TGG	-	Chr5:3049362-3049381	None:intergenic	40.0%
	ACATGCTATCATGTGACACA+TGG	-	Chr5:3048828-3048847	None:intergenic	40.0%
	CAAAAGGGTTCCAAAGTGAA+GGG	+	Chr5:3048683-3048702	MsG0580024293.01.T01:CDS	40.0%
	CTCTTACTCTTCAGGTACTA+GGG	+	Chr5:3049458-3049477	MsG0580024293.01.T01:CDS	40.0%
	GAGACGATGCCAAGATAATT+TGG	+	Chr5:3049362-3049381	MsG0580024293.01.T01:CDS	40.0%
	GCAAAAATGGCGGTGAAAAA+AGG	-	Chr5:3049034-3049053	None:intergenic	40.0%
	GCCCTAAAATCAGTACTACA+AGG	+	Chr5:3049199-3049218	MsG0580024293.01.T01:CDS	40.0%
	TCAAAAGGGTTCCAAAGTGA+AGG	+	Chr5:3048682-3048701	MsG0580024293.01.T01:CDS	40.0%
	TCAACCCGTTTCTTCACAAT+AGG	+	Chr5:3048707-3048726	MsG0580024293.01.T01:CDS	40.0%
	TCGTGACCAAAAAATTGGTC+AGG	-	Chr5:3049426-3049445	None:intergenic	40.0%
!	ATTTTCCTCCATTATCAGCG+TGG	-	Chr5:3049314-3049333	None:intergenic	40.0%
!	TGGTGTGGTTATTGCTACTT+GGG	+	Chr5:3049117-3049136	MsG0580024293.01.T01:CDS	40.0%
!!	AATGATGGGTTATGGTCTCA+CGG	+	Chr5:3049549-3049568	MsG0580024293.01.T01:CDS	40.0%
	CAGGTACTAGGGAATGCTAA+AGG	+	Chr5:3049469-3049488	MsG0580024293.01.T01:CDS	45.0%
	CTGGTGTGGTTATTGCTACT+TGG	+	Chr5:3049116-3049135	MsG0580024293.01.T01:CDS	45.0%
	GCATGGTACTCTTCCAACAT+TGG	+	Chr5:3048740-3048759	MsG0580024293.01.T01:CDS	45.0%
	GCTCTTACTCTTCAGGTACT+AGG	+	Chr5:3049457-3049476	MsG0580024293.01.T01:CDS	45.0%
	TACCAGTGCTCTTACTCTTC+AGG	+	Chr5:3049450-3049469	MsG0580024293.01.T01:CDS	45.0%
!	CAATAGGTCTTGTAGCAGCA+TGG	+	Chr5:3048723-3048742	MsG0580024293.01.T01:CDS	45.0%
!	GGTGTGGTTATTGCTACTTG+GGG	+	Chr5:3049118-3049137	MsG0580024293.01.T01:CDS	45.0%
!	GGTTATGGTCTCACGGTTTT+TGG	+	Chr5:3049556-3049575	MsG0580024293.01.T01:CDS	45.0%
!	TACCTGAAGAGTAAGAGCAC+TGG	-	Chr5:3049455-3049474	None:intergenic	45.0%
	AGAAGGAAAACCGCTGCCAT+TGG	-	Chr5:3049286-3049305	None:intergenic	50.0%
	CCATTGGAGCCATGTAAAGG+AGG	-	Chr5:3049270-3049289	None:intergenic	50.0%
	CCTCCTTTACATGGCTCCAA+TGG	+	Chr5:3049267-3049286	MsG0580024293.01.T01:CDS	50.0%
	CTGCCATTGGAGCCATGTAA+AGG	-	Chr5:3049273-3049292	None:intergenic	50.0%
	TTACATGGCTCCAATGGCAG+CGG	+	Chr5:3049273-3049292	MsG0580024293.01.T01:CDS	50.0%
	TTCCTCCATTATCAGCGTGG+CGG	-	Chr5:3049311-3049330	None:intergenic	50.0%
	TTGGAGCCATGTAAAGGAGG+AGG	-	Chr5:3049267-3049286	None:intergenic	50.0%
!	ACGGGTTGAACCCTTCACTT+TGG	-	Chr5:3048696-3048715	None:intergenic	50.0%
	TCCTCCATTATCAGCGTGGC+GGG	-	Chr5:3049310-3049329	None:intergenic	55.0%
	TCTTCCCGCCACGCTGATAA+TGG	+	Chr5:3049303-3049322	MsG0580024293.01.T01:CDS	55.0%
!	TTATCAGCGTGGCGGGAAGA+AGG	-	Chr5:3049303-3049322	None:intergenic	55.0%
!!	TCCCGCCACGCTGATAATGG+AGG	+	Chr5:3049306-3049325	MsG0580024293.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	3048656	3049627	3048656	ID=MsG0580024293.01;Name=MsG0580024293.01
Chr5	mRNA	3048656	3049627	3048656	ID=MsG0580024293.01.T01;Parent=MsG0580024293.01;Name=MsG0580024293.01.T01;_AED=0.10;_eAED=0.10;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|323
Chr5	exon	3048656	3049627	3048656	ID=MsG0580024293.01.T01:exon:1936;Parent=MsG0580024293.01.T01
Chr5	CDS	3048656	3049627	3048656	ID=MsG0580024293.01.T01:cds;Parent=MsG0580024293.01.T01

Gene Sequence

>MsG0580024293.01.T01

ATGAAATCATTACACGTTTCTGAAGATCAAAAGGGTTCCAAAGTGAAGGGTTCAACCCGTTTCTTCACAATAGGTCTTGTAGCAGCATGGTACTCTTCCAACATTGGTGTTCTTCTATTGAACAAGTACTTGCTAAGCACTTATGGTTTCAAGTACCCTATTTTTCTTACCATGTGTCACATGATAGCATGTTCTTTATTTAGTTATGTTGCTATAGTATGGATGAAGGTTGTTCCTATGCAAACTATTCAATCTAGGGTTCAATTCTTCAAGATCTCTGCTTTGAGTTTGATTTTTTGTATTTCTCTTGTGTTTGGAAACATTTCACTTCGTTATATTCCTGTGTCTTTTAATCAGGCTATTGGCGCTACTACGCCTTTTTTCACCGCCATTTTTGCTTATATTATGACTTTTAAGAGAGAGGGTTTGCTCACTTATCTTACACTTATTCCTATTGTTACTGGTGTGGTTATTGCTACTTGGGGCGAACCGAGTTTCCATTTATTTGGATTCATTATATGTGTTGTGGCTACATCTGCAAGAGCCCTAAAATCAGTACTACAAGGAATTTTGCTTTCTTCTGAAAGAGAGAAGCTGAATTCAATGAACCTCCTCCTTTACATGGCTCCAATGGCAGCGGTTTTCCTTCTTCCCGCCACGCTGATAATGGAGGAAAATGTCGTTCGCATCACGTTGTCTCTCGCCAGAGACGATGCCAAGATAATTTGGTATCTTCTATTTAACTCGACTCTTGCGTATTTTGTCAACCTGACCAATTTTTTGGTCACGAAACATACCAGTGCTCTTACTCTTCAGGTACTAGGGAATGCTAAAGGTGCTGTAGCTGTAGCAGTTTCAATCCTAATATTTAAAAATGCAGTTTCAATCATTGGAATGATGGGTTATGGTCTCACGGTTTTTGGAGTAATTCTTTACAGCAAAGCCAAAAAGAGACCAAGTGATACTTCATAA

Protein sequence

>MsG0580024293.01.T01

MKSLHVSEDQKGSKVKGSTRFFTIGLVAAWYSSNIGVLLLNKYLLSTYGFKYPIFLTMCHMIACSLFSYVAIVWMKVVPMQTIQSRVQFFKISALSLIFCISLVFGNISLRYIPVSFNQAIGATTPFFTAIFAYIMTFKREGLLTYLTLIPIVTGVVIATWGEPSFHLFGFIICVVATSARALKSVLQGILLSSEREKLNSMNLLLYMAPMAAVFLLPATLIMEENVVRITLSLARDDAKIIWYLLFNSTLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVAVSILIFKNAVSIIGMMGYGLTVFGVILYSKAKKRPSDTS*