AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018283.01


Find 29 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
Chr4 gene 2748110 2753241 2748110 ID=MsG0480018283.01;Name=MsG0480018283.01
Chr4 mRNA 2748110 2753241 2748110 ID=MsG0480018283.01.T01;Parent=MsG0480018283.01;Name=MsG0480018283.01.T01;_AED=0.38;_eAED=0.38;_QI=11|1|1|1|0.88|1|10|199|856
Chr4 exon 2749092 2749337 2749092 ID=MsG0480018283.01.T01:exon:854;Parent=MsG0480018283.01.T01
Chr4 five_prime_UTR 2748110 2748120 2748110 ID=MsG0480018283.01.T01:five_prime_utr;Parent=MsG0480018283.01.T01
Chr4 CDS 2748121 2748575 2748121 ID=MsG0480018283.01.T01:cds;Parent=MsG0480018283.01.T01
Chr4 CDS 2748717 2748813 2748717 ID=MsG0480018283.01.T01:cds;Parent=MsG0480018283.01.T01
Chr4 CDS 2748895 2749008 2748895 ID=MsG0480018283.01.T01:cds;Parent=MsG0480018283.01.T01
Chr4 CDS 2749092 2749337 2749092 ID=MsG0480018283.01.T01:cds;Parent=MsG0480018283.01.T01
Chr4 CDS 2749947 2750065 2749947 ID=MsG0480018283.01.T01:cds;Parent=MsG0480018283.01.T01
Chr4 CDS 2750159 2750656 2750159 ID=MsG0480018283.01.T01:cds;Parent=MsG0480018283.01.T01
Chr4 CDS 2750956 2751064 2750956 ID=MsG0480018283.01.T01:cds;Parent=MsG0480018283.01.T01
Chr4 CDS 2751178 2751743 2751178 ID=MsG0480018283.01.T01:cds;Parent=MsG0480018283.01.T01
Chr4 CDS 2752558 2752725 2752558 ID=MsG0480018283.01.T01:cds;Parent=MsG0480018283.01.T01
Chr4 CDS 2752844 2753042 2752844 ID=MsG0480018283.01.T01:cds;Parent=MsG0480018283.01.T01
Chr4 three_prime_UTR 2753043 2753241 2753043 ID=MsG0480018283.01.T01:three_prime_utr;Parent=MsG0480018283.01.T01
Chr4 mRNA 2748110 2753241 2748110 ID=MsG0480018283.01.T02;Parent=MsG0480018283.01;Name=MsG0480018283.01.T02;_AED=0.37;_eAED=0.37;_QI=811|1|1|1|0.87|0.88|9|199|617
Chr4 exon 2748895 2749337 2748895 ID=MsG0480018283.01.T02:exon:861;Parent=MsG0480018283.01.T02
Chr4 five_prime_UTR 2748110 2748575 2748110 ID=MsG0480018283.01.T02:five_prime_utr;Parent=MsG0480018283.01.T02
Chr4 five_prime_UTR 2748717 2748813 2748717 ID=MsG0480018283.01.T02:five_prime_utr;Parent=MsG0480018283.01.T02
Chr4 five_prime_UTR 2748895 2749142 2748895 ID=MsG0480018283.01.T02:five_prime_utr;Parent=MsG0480018283.01.T02
Chr4 CDS 2749143 2749337 2749143 ID=MsG0480018283.01.T02:cds;Parent=MsG0480018283.01.T02
Chr4 CDS 2749947 2750065 2749947 ID=MsG0480018283.01.T02:cds;Parent=MsG0480018283.01.T02
Chr4 CDS 2750159 2750656 2750159 ID=MsG0480018283.01.T02:cds;Parent=MsG0480018283.01.T02
Chr4 CDS 2750956 2751064 2750956 ID=MsG0480018283.01.T02:cds;Parent=MsG0480018283.01.T02
Chr4 CDS 2751178 2751743 2751178 ID=MsG0480018283.01.T02:cds;Parent=MsG0480018283.01.T02
Chr4 CDS 2752558 2752725 2752558 ID=MsG0480018283.01.T02:cds;Parent=MsG0480018283.01.T02
Chr4 CDS 2752844 2753042 2752844 ID=MsG0480018283.01.T02:cds;Parent=MsG0480018283.01.T02
Chr4 three_prime_UTR 2753043 2753241 2753043 ID=MsG0480018283.01.T02:three_prime_utr;Parent=MsG0480018283.01.T02
Chr4 mRNA 2748110 2749355 2748110 ID=MsG0480018283.01.T03;Parent=MsG0480018283.01;Name=MsG0480018283.01.T03;_AED=0.46;_eAED=0.47;_QI=11|1|0.75|1|1|1|4|0|309
Chr4 exon 2749092 2749355 2749092 ID=MsG0480018283.01.T03:exon:862;Parent=MsG0480018283.01.T03
Chr4 five_prime_UTR 2748110 2748120 2748110 ID=MsG0480018283.01.T03:five_prime_utr;Parent=MsG0480018283.01.T03
Chr4 CDS 2748121 2748575 2748121 ID=MsG0480018283.01.T03:cds;Parent=MsG0480018283.01.T03
Chr4 CDS 2748717 2748813 2748717 ID=MsG0480018283.01.T03:cds;Parent=MsG0480018283.01.T03
Chr4 CDS 2748895 2749008 2748895 ID=MsG0480018283.01.T03:cds;Parent=MsG0480018283.01.T03
Chr4 CDS 2749092 2749355 2749092 ID=MsG0480018283.01.T03:cds;Parent=MsG0480018283.01.T03
Gene Sequence

>MsG0480018283.01.T03

ATGGTTACTGACGTGACTAAAAAGCCTAAAGGTTCAGCACCCATAGCAGCGCCACCTCGCAAAATCAATGTGCCGAAGTTTGCAGAATCCCGTGCTCCTGAGCTTCAAAGCCTTCAACGTATCGTTGAAAATAGATTAAGCAATGATTATAAGTCTCAAAGGAACAAGAGAAGAAGAACAACGTCATTTAATGACCAAATTGCAAGAAAGGGGCACAGGAGAAAGAGGCAAAAACTTGGAAAAGTTGATAAAAATGCTGAATCAGTTTTGAAGGACAATATAACACAGCTTCCTCGACATGTTCGTCGAAGAAATGAACTCAAGAGTAACCCTGAGAATGGCTTTTGCACTTCTGGTGATGGAACCAGGAGACTGAGAACACATGTTTGGCTTGCAAAGCGATTTTCCATGACCAAGCTGTGGGGTTACCACCTTCCTCTGGGTCTTCAAGGAAGAGGGAAAGGTTCGAGGGCGTTGTTGAGAAAGCTCAAACAAGGAGTGCTGGCACACGATGCAAGCTATTACTCTGCCGTTCAATTGGAGGGTCCAGAGGATTCGTTACTTTCAATATTAAGAATGGTACTTGTGCCCTCTCCCATAGAAGTAACACATCCCAGAAATCACGATGATTCTGTTCTTTCTGGCACAACCTATGGAACATCAATGCTTCATCAAGTTGGAGCACCAGTTTCTCTGGCAATCGCTCCTGTAACTTATATGTGGCGTCCAACTTTCCAAGAAAATGTCACAGACCTAGGTGTTAGCGATGAAAAAATTATTCCCGATGTTGATTTATGTGACAAATCAGAAAGAATGGAGTGTAGTTGTTCTTTTAGACACCTTTGGGTGTGGATACATGCTTCTGCCTTTGAAGAAGGATATGCTAATCTAAAACTGGCATGCCAGAAAGAGGTTCACTCTCTTCTTTAA

>MsG0480018283.01.T01

ATGGTTACTGACGTGACTAAAAAGCCTAAAGGTTCAGCACCCATAGCAGCGCCACCTCGCAAAATCAATGTGCCGAAGTTTGCAGAATCCCGTGCTCCTGAGCTTCAAAGCCTTCAACGTATCGTTGAAAATAGATTAAGCAATGATTATAAGTCTCAAAGGAACAAGAGAAGAAGAACAACGTCATTTAATGACCAAATTGCAAGAAAGGGGCACAGGAGAAAGAGGCAAAAACTTGGAAAAGTTGATAAAAATGCTGAATCAGTTTTGAAGGACAATATAACACAGCTTCCTCGACATGTTCGTCGAAGAAATGAACTCAAGAGTAACCCTGAGAATGGCTTTTGCACTTCTGGTGATGGAACCAGGAGACTGAGAACACATGTTTGGCTTGCAAAGCGATTTTCCATGACCAAGCTGTGGGGTTACCACCTTCCTCTGGGTCTTCAAGGAAGAGGGAAAGGTTCGAGGGCGTTGTTGAGAAAGCTCAAACAAGGAGTGCTGGCACACGATGCAAGCTATTACTCTGCCGTTCAATTGGAGGGTCCAGAGGATTCGTTACTTTCAATATTAAGAATGGTACTTGTGCCCTCTCCCATAGAAGTAACACATCCCAGAAATCACGATGATTCTGTTCTTTCTGGCACAACCTATGGAACATCAATGCTTCATCAAGTTGGAGCACCAGTTTCTCTGGCAATCGCTCCTGTAACTTATATGTGGCGTCCAACTTTCCAAGAAAATGTCACAGACCTAGGTGTTAGCGATGAAAAAATTATTCCCGATGTTGATTTATGTGACAAATCAGAAAGAATGGAGTGTAGTTGTTCTTTTAGACACCTTTGGGTGTGGATACATGCTTCTGCCTTTGAAGAAGGATATGCTAATCTAAAACTGGCATGCCAGAAAGAGATGGAAAAGAGAGACATCTCGATCAGTTGTTCTTCTCTCGAGGGTCAACTTGCAAAATTGGAATTAATTGGATCAGGGACATTTCAACTTCTTCAGAAGATATTGCATCCTGTTAGAAGTATTTCAGAAAATCATTGGCAGTTAAAGAAACACGTTACTACAGAAGAAAACCATGTTTCTCAAAATACAGAGTCTTCCATACTGAAAAATGAGGAGGATTTTTCTTGTCATGCAATGTTATCTCTTACTGTTAAGGATCCTCGGGATTTACCTGTGAAAAAAACTGTTGTTCCAATAGAGCCAATTTCAACTAAGGTTCTAAGTGATGCACAAGAAACTAGCTGCAAAGAGCTTGCTGATTTGGAAGGAATGTTGGAAAAGAATAAAGATTTTGGAGACAATCGGTCTGATGTTGATGATCTATGGTATGCTACAACAAGAGGCTTGAAGCCTCCAGTGGAAGACAGTGTCCTTTCTATGGAGAAGCACCGTGAACGCATGGTTAAATTCTGCCTAGATGACATGAATTTTGGGGTGGCGAACTCTTCCAAAGTGCAGTGCTCAAGATCTTGCCCTATTCTGCTGTTAAAAAATGATATGAAGGAATTGACCATGGGATGGTCTATTATACTTCCCTTAAGTTGGGTCAAAGCCTTCTGGATTCCACTCGTCTCTAATGGGGCACATGCAATAGGTTTGCGAGAGAAGCAGTGGATTGCATCTGATACGGGGATACCATTTTTCCCTCAAGATTTCCCGGATTGCAAGGCGTACTCATGCTTCATGGCTGCTAAAGCTGCCGAATGTGATCAAAAGGAAGAACTTCGTCCTCCTTCTGTAAGAAATTTGAGAGTTCCCATCCTGCCTCCATGGCGTATTGTTCACAATACTTTCAACATAAAGATTAGCAATATGGAGACTCTTGACCTTTCAGCTAGGGAAGATTTGACCAATGCTAATTCCTTGTCCAACTCTAAAATTTCAAATTTCGACTCTGAGAATGCATTTAATGGAACTGTAGCAAGGACAGGTTGTATGCTGACTACTTTACTCGACGAAACCAAAACTGGTCGACTGCTGTTATTTCCTTATGCAGCAGATGGAAAGGCCAGAATCTCTAAGTTTATTAAGGGAGAAATAATGCTTGATACAAGGCATAAAAGTTCTATCATTTATGACCGTAAGCTATGTTTTATAAGAGTTCATCTTCAGCCATTCAAGGAAGGCTTTTTTGAAGAGGGTGCAGTTATTTGTGCGCCACATCCTTCTGATATATCTTTATGGACTTTAAGTTCAGTGAAAAGTGAAGTGGGACTTAAACTGTCTGAGTCTGCTATGCGATCATATTTCAAAGAGAATTCCTCCGGTGAATGGGGAATGCAGATACCAGATGATTCAGTTGGTAGAGAGTCTCACCGGTGGCCTATTGGCTTTGTTACGTCCGCTTGTGTTCAAGGAAGCAAGAGGCTTGCAGCCGAGGGATTTTGTGAGGCAGTTTTACTATCTCATCTAAGAGAGGAACAGTGGATGGAGATGCCCGTGAAGCAGAGGAGGAGCGAAATATACGTACTTGTCAGGAATTTAAGATCTGTTGCTTATAGGCTAGCTCTTGCTTCTATAGTCCTAGAATATCAGGAAAATGACACTGAGTTCTTGTAA

>MsG0480018283.01.T02

ATGTGGCGTCCAACTTTCCAAGAAAATGTCACAGACCTAGGTGTTAGCGATGAAAAAATTATTCCCGATGTTGATTTATGTGACAAATCAGAAAGAATGGAGTGTAGTTGTTCTTTTAGACACCTTTGGGTGTGGATACATGCTTCTGCCTTTGAAGAAGGATATGCTAATCTAAAACTGGCATGCCAGAAAGAGATGGAAAAGAGAGACATCTCGATCAGTTGTTCTTCTCTCGAGGGTCAACTTGCAAAATTGGAATTAATTGGATCAGGGACATTTCAACTTCTTCAGAAGATATTGCATCCTGTTAGAAGTATTTCAGAAAATCATTGGCAGTTAAAGAAACACGTTACTACAGAAGAAAACCATGTTTCTCAAAATACAGAGTCTTCCATACTGAAAAATGAGGAGGATTTTTCTTGTCATGCAATGTTATCTCTTACTGTTAAGGATCCTCGGGATTTACCTGTGAAAAAAACTGTTGTTCCAATAGAGCCAATTTCAACTAAGGTTCTAAGTGATGCACAAGAAACTAGCTGCAAAGAGCTTGCTGATTTGGAAGGAATGTTGGAAAAGAATAAAGATTTTGGAGACAATCGGTCTGATGTTGATGATCTATGGTATGCTACAACAAGAGGCTTGAAGCCTCCAGTGGAAGACAGTGTCCTTTCTATGGAGAAGCACCGTGAACGCATGGTTAAATTCTGCCTAGATGACATGAATTTTGGGGTGGCGAACTCTTCCAAAGTGCAGTGCTCAAGATCTTGCCCTATTCTGCTGTTAAAAAATGATATGAAGGAATTGACCATGGGATGGTCTATTATACTTCCCTTAAGTTGGGTCAAAGCCTTCTGGATTCCACTCGTCTCTAATGGGGCACATGCAATAGGTTTGCGAGAGAAGCAGTGGATTGCATCTGATACGGGGATACCATTTTTCCCTCAAGATTTCCCGGATTGCAAGGCGTACTCATGCTTCATGGCTGCTAAAGCTGCCGAATGTGATCAAAAGGAAGAACTTCGTCCTCCTTCTGTAAGAAATTTGAGAGTTCCCATCCTGCCTCCATGGCGTATTGTTCACAATACTTTCAACATAAAGATTAGCAATATGGAGACTCTTGACCTTTCAGCTAGGGAAGATTTGACCAATGCTAATTCCTTGTCCAACTCTAAAATTTCAAATTTCGACTCTGAGAATGCATTTAATGGAACTGTAGCAAGGACAGGTTGTATGCTGACTACTTTACTCGACGAAACCAAAACTGGTCGACTGCTGTTATTTCCTTATGCAGCAGATGGAAAGGCCAGAATCTCTAAGTTTATTAAGGGAGAAATAATGCTTGATACAAGGCATAAAAGTTCTATCATTTATGACCGTAAGCTATGTTTTATAAGAGTTCATCTTCAGCCATTCAAGGAAGGCTTTTTTGAAGAGGGTGCAGTTATTTGTGCGCCACATCCTTCTGATATATCTTTATGGACTTTAAGTTCAGTGAAAAGTGAAGTGGGACTTAAACTGTCTGAGTCTGCTATGCGATCATATTTCAAAGAGAATTCCTCCGGTGAATGGGGAATGCAGATACCAGATGATTCAGTTGGTAGAGAGTCTCACCGGTGGCCTATTGGCTTTGTTACGTCCGCTTGTGTTCAAGGAAGCAAGAGGCTTGCAGCCGAGGGATTTTGTGAGGCAGTTTTACTATCTCATCTAAGAGAGGAACAGTGGATGGAGATGCCCGTGAAGCAGAGGAGGAGCGAAATATACGTACTTGTCAGGAATTTAAGATCTGTTGCTTATAGGCTAGCTCTTGCTTCTATAGTCCTAGAATATCAGGAAAATGACACTGAGTTCTTGTAA

Protein sequence

>MsG0480018283.01.T03

MVTDVTKKPKGSAPIAAPPRKINVPKFAESRAPELQSLQRIVENRLSNDYKSQRNKRRRTTSFNDQIARKGHRRKRQKLGKVDKNAESVLKDNITQLPRHVRRRNELKSNPENGFCTSGDGTRRLRTHVWLAKRFSMTKLWGYHLPLGLQGRGKGSRALLRKLKQGVLAHDASYYSAVQLEGPEDSLLSILRMVLVPSPIEVTHPRNHDDSVLSGTTYGTSMLHQVGAPVSLAIAPVTYMWRPTFQENVTDLGVSDEKIIPDVDLCDKSERMECSCSFRHLWVWIHASAFEEGYANLKLACQKEVHSLL*

>MsG0480018283.01.T01

MVTDVTKKPKGSAPIAAPPRKINVPKFAESRAPELQSLQRIVENRLSNDYKSQRNKRRRTTSFNDQIARKGHRRKRQKLGKVDKNAESVLKDNITQLPRHVRRRNELKSNPENGFCTSGDGTRRLRTHVWLAKRFSMTKLWGYHLPLGLQGRGKGSRALLRKLKQGVLAHDASYYSAVQLEGPEDSLLSILRMVLVPSPIEVTHPRNHDDSVLSGTTYGTSMLHQVGAPVSLAIAPVTYMWRPTFQENVTDLGVSDEKIIPDVDLCDKSERMECSCSFRHLWVWIHASAFEEGYANLKLACQKEMEKRDISISCSSLEGQLAKLELIGSGTFQLLQKILHPVRSISENHWQLKKHVTTEENHVSQNTESSILKNEEDFSCHAMLSLTVKDPRDLPVKKTVVPIEPISTKVLSDAQETSCKELADLEGMLEKNKDFGDNRSDVDDLWYATTRGLKPPVEDSVLSMEKHRERMVKFCLDDMNFGVANSSKVQCSRSCPILLLKNDMKELTMGWSIILPLSWVKAFWIPLVSNGAHAIGLREKQWIASDTGIPFFPQDFPDCKAYSCFMAAKAAECDQKEELRPPSVRNLRVPILPPWRIVHNTFNIKISNMETLDLSAREDLTNANSLSNSKISNFDSENAFNGTVARTGCMLTTLLDETKTGRLLLFPYAADGKARISKFIKGEIMLDTRHKSSIIYDRKLCFIRVHLQPFKEGFFEEGAVICAPHPSDISLWTLSSVKSEVGLKLSESAMRSYFKENSSGEWGMQIPDDSVGRESHRWPIGFVTSACVQGSKRLAAEGFCEAVLLSHLREEQWMEMPVKQRRSEIYVLVRNLRSVAYRLALASIVLEYQENDTEFL*

>MsG0480018283.01.T02

MWRPTFQENVTDLGVSDEKIIPDVDLCDKSERMECSCSFRHLWVWIHASAFEEGYANLKLACQKEMEKRDISISCSSLEGQLAKLELIGSGTFQLLQKILHPVRSISENHWQLKKHVTTEENHVSQNTESSILKNEEDFSCHAMLSLTVKDPRDLPVKKTVVPIEPISTKVLSDAQETSCKELADLEGMLEKNKDFGDNRSDVDDLWYATTRGLKPPVEDSVLSMEKHRERMVKFCLDDMNFGVANSSKVQCSRSCPILLLKNDMKELTMGWSIILPLSWVKAFWIPLVSNGAHAIGLREKQWIASDTGIPFFPQDFPDCKAYSCFMAAKAAECDQKEELRPPSVRNLRVPILPPWRIVHNTFNIKISNMETLDLSAREDLTNANSLSNSKISNFDSENAFNGTVARTGCMLTTLLDETKTGRLLLFPYAADGKARISKFIKGEIMLDTRHKSSIIYDRKLCFIRVHLQPFKEGFFEEGAVICAPHPSDISLWTLSSVKSEVGLKLSESAMRSYFKENSSGEWGMQIPDDSVGRESHRWPIGFVTSACVQGSKRLAAEGFCEAVLLSHLREEQWMEMPVKQRRSEIYVLVRNLRSVAYRLALASIVLEYQENDTEFL*