Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018304.01.T01 | AES86488.2 | 89.748 | 556 | 57 | 0 | 1 | 556 | 1 | 556 | 0 | 996 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018304.01.T01 | Q9C5D2 | 23.792 | 559 | 356 | 17 | 6 | 526 | 11 | 537 | 1.04E-17 | 90.1 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018304.01.T01 | G7JFM9 | 89.748 | 556 | 57 | 0 | 1 | 556 | 1 | 556 | 0.0 | 996 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0280011282.01 | MsG0480018304.01 | 0.802500 | 5.448547e-49 | 2.673116e-46 |
MsG0480018304.01 | MsG0780038386.01 | 0.803637 | 3.170743e-49 | 1.601514e-46 |
MsG0480018304.01 | MsG0780039655.01 | 0.800590 | 1.342078e-48 | 6.273179e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018304.01.T01 | MTR_4g009030 | 89.748 | 556 | 57 | 0 | 1 | 556 | 1 | 556 | 0.0 | 996 |
MsG0480018304.01.T01 | MTR_4g006240 | 44.306 | 562 | 293 | 7 | 6 | 555 | 7 | 560 | 3.25e-134 | 402 |
MsG0480018304.01.T01 | MTR_4g133640 | 42.596 | 547 | 298 | 7 | 11 | 550 | 39 | 576 | 2.03e-132 | 399 |
MsG0480018304.01.T01 | MTR_5g075860 | 42.266 | 556 | 297 | 5 | 6 | 552 | 7 | 547 | 7.75e-129 | 388 |
MsG0480018304.01.T01 | MTR_2g007590 | 42.308 | 546 | 299 | 8 | 12 | 550 | 40 | 576 | 1.18e-128 | 389 |
MsG0480018304.01.T01 | MTR_5g095830 | 41.316 | 547 | 313 | 5 | 7 | 552 | 49 | 588 | 2.87e-125 | 382 |
MsG0480018304.01.T01 | MTR_3g006050 | 43.258 | 534 | 287 | 7 | 24 | 550 | 55 | 579 | 4.29e-122 | 372 |
MsG0480018304.01.T01 | MTR_4g019320 | 41.918 | 563 | 282 | 9 | 6 | 552 | 8 | 541 | 6.96e-120 | 365 |
MsG0480018304.01.T01 | MTR_8g037780 | 39.535 | 559 | 317 | 9 | 5 | 552 | 24 | 572 | 1.58e-116 | 357 |
MsG0480018304.01.T01 | MTR_1g115380 | 41.441 | 555 | 304 | 13 | 6 | 551 | 7 | 549 | 5.13e-115 | 353 |
MsG0480018304.01.T01 | MTR_5g430490 | 41.270 | 567 | 295 | 13 | 6 | 550 | 15 | 565 | 7.28e-115 | 353 |
MsG0480018304.01.T01 | MTR_8g017160 | 38.681 | 561 | 322 | 8 | 5 | 552 | 27 | 578 | 1.85e-114 | 352 |
MsG0480018304.01.T01 | MTR_3g465770 | 42.056 | 535 | 290 | 9 | 24 | 550 | 40 | 562 | 3.25e-114 | 351 |
MsG0480018304.01.T01 | MTR_4g006450 | 40.636 | 566 | 292 | 12 | 6 | 555 | 8 | 545 | 4.38e-113 | 348 |
MsG0480018304.01.T01 | MTR_3g110740 | 40.226 | 532 | 290 | 10 | 5 | 520 | 43 | 562 | 2.38e-110 | 341 |
MsG0480018304.01.T01 | MTR_1g050478 | 40.659 | 546 | 277 | 13 | 7 | 520 | 13 | 543 | 1.79e-108 | 335 |
MsG0480018304.01.T01 | MTR_8g045150 | 39.964 | 553 | 248 | 10 | 6 | 555 | 9 | 480 | 8.30e-100 | 311 |
MsG0480018304.01.T01 | MTR_7g029535 | 41.267 | 521 | 264 | 14 | 24 | 520 | 94 | 596 | 5.81e-99 | 312 |
MsG0480018304.01.T01 | MTR_5g088250 | 36.559 | 558 | 295 | 13 | 8 | 550 | 13 | 526 | 3.60e-93 | 296 |
MsG0480018304.01.T01 | MTR_3g083280 | 38.378 | 555 | 257 | 14 | 6 | 547 | 7 | 489 | 1.68e-92 | 292 |
MsG0480018304.01.T01 | MTR_6g016725 | 40.310 | 516 | 278 | 13 | 24 | 520 | 94 | 598 | 1.83e-92 | 295 |
MsG0480018304.01.T01 | MTR_6g016905 | 37.217 | 575 | 312 | 16 | 6 | 556 | 9 | 558 | 9.03e-92 | 292 |
MsG0480018304.01.T01 | MTR_4g059340 | 37.636 | 550 | 288 | 11 | 6 | 530 | 11 | 530 | 2.73e-91 | 291 |
MsG0480018304.01.T01 | MTR_3g036270 | 40.891 | 516 | 275 | 13 | 24 | 520 | 94 | 598 | 4.71e-89 | 286 |
MsG0480018304.01.T01 | MTR_3g073390 | 37.624 | 505 | 248 | 15 | 61 | 550 | 53 | 505 | 8.16e-76 | 249 |
MsG0480018304.01.T01 | MTR_3g074000 | 37.923 | 443 | 235 | 10 | 11 | 433 | 17 | 439 | 5.75e-69 | 229 |
MsG0480018304.01.T01 | MTR_4g006290 | 34.369 | 483 | 259 | 11 | 81 | 555 | 5 | 437 | 1.27e-67 | 226 |
MsG0480018304.01.T01 | MTR_3g074570 | 41.433 | 321 | 157 | 5 | 256 | 550 | 125 | 440 | 1.72e-62 | 212 |
MsG0480018304.01.T01 | MTR_3g074570 | 27.500 | 440 | 244 | 13 | 62 | 452 | 2 | 415 | 1.36e-26 | 113 |
MsG0480018304.01.T01 | MTR_1g115390 | 40.237 | 338 | 187 | 7 | 181 | 513 | 20 | 347 | 1.15e-60 | 204 |
MsG0480018304.01.T01 | MTR_4g008430 | 41.640 | 317 | 171 | 5 | 133 | 449 | 1 | 303 | 8.70e-57 | 192 |
MsG0480018304.01.T01 | MTR_4g435328 | 40.129 | 309 | 172 | 4 | 37 | 345 | 1 | 296 | 1.08e-55 | 190 |
MsG0480018304.01.T01 | MTR_6g016705 | 47.034 | 236 | 116 | 3 | 299 | 526 | 163 | 397 | 3.26e-55 | 192 |
MsG0480018304.01.T01 | MTR_6g016705 | 28.767 | 365 | 230 | 10 | 14 | 360 | 8 | 360 | 1.68e-27 | 115 |
MsG0480018304.01.T01 | MTR_3g074550 | 41.053 | 285 | 149 | 4 | 168 | 452 | 81 | 346 | 3.63e-54 | 188 |
MsG0480018304.01.T01 | MTR_3g074550 | 30.000 | 310 | 183 | 9 | 256 | 550 | 81 | 371 | 1.48e-24 | 105 |
MsG0480018304.01.T01 | MTR_6g016910 | 45.064 | 233 | 125 | 3 | 300 | 530 | 179 | 410 | 2.90e-51 | 181 |
MsG0480018304.01.T01 | MTR_6g016910 | 25.870 | 460 | 257 | 16 | 5 | 450 | 14 | 403 | 3.91e-17 | 84.3 |
MsG0480018304.01.T01 | MTR_6g016750 | 44.255 | 235 | 123 | 3 | 299 | 532 | 190 | 417 | 2.89e-50 | 179 |
MsG0480018304.01.T01 | MTR_6g016750 | 27.273 | 363 | 236 | 11 | 6 | 360 | 32 | 374 | 8.99e-19 | 89.4 |
MsG0480018304.01.T01 | MTR_6g022820 | 36.412 | 379 | 201 | 7 | 156 | 532 | 125 | 465 | 1.85e-49 | 178 |
MsG0480018304.01.T01 | MTR_6g022820 | 27.697 | 343 | 231 | 12 | 20 | 360 | 95 | 422 | 6.12e-20 | 93.2 |
MsG0480018304.01.T01 | MTR_1g069090 | 40.458 | 262 | 127 | 3 | 299 | 555 | 39 | 276 | 5.27e-49 | 171 |
MsG0480018304.01.T01 | MTR_6g016685 | 46.320 | 231 | 115 | 4 | 301 | 530 | 117 | 339 | 5.09e-48 | 171 |
MsG0480018304.01.T01 | MTR_6g025290 | 40.449 | 267 | 144 | 6 | 259 | 519 | 148 | 405 | 1.97e-47 | 171 |
MsG0480018304.01.T01 | MTR_6g025290 | 28.212 | 397 | 254 | 12 | 6 | 390 | 32 | 409 | 1.27e-30 | 124 |
MsG0480018304.01.T01 | MTR_5g095810 | 37.417 | 302 | 146 | 3 | 250 | 550 | 8 | 267 | 6.05e-47 | 166 |
MsG0480018304.01.T01 | MTR_6g016915 | 45.854 | 205 | 108 | 2 | 322 | 525 | 171 | 373 | 2.01e-46 | 167 |
MsG0480018304.01.T01 | MTR_6g016915 | 28.342 | 374 | 185 | 13 | 7 | 332 | 47 | 385 | 1.47e-21 | 97.4 |
MsG0480018304.01.T01 | MTR_1g069145 | 39.615 | 260 | 128 | 3 | 298 | 552 | 268 | 503 | 3.06e-46 | 170 |
MsG0480018304.01.T01 | MTR_1g069145 | 25.054 | 463 | 248 | 13 | 6 | 461 | 113 | 483 | 4.35e-19 | 90.9 |
MsG0480018304.01.T01 | MTR_5g046730 | 44.843 | 223 | 119 | 3 | 299 | 520 | 200 | 419 | 2.09e-45 | 166 |
MsG0480018304.01.T01 | MTR_5g046730 | 26.075 | 372 | 240 | 13 | 6 | 360 | 35 | 388 | 2.11e-16 | 82.0 |
MsG0480018304.01.T01 | MTR_8g045190 | 39.916 | 238 | 128 | 2 | 6 | 228 | 20 | 257 | 3.82e-45 | 160 |
MsG0480018304.01.T01 | MTR_4g009055 | 34.896 | 384 | 211 | 10 | 77 | 452 | 1 | 353 | 5.53e-45 | 164 |
MsG0480018304.01.T01 | MTR_4g024200 | 36.789 | 299 | 160 | 5 | 254 | 550 | 183 | 454 | 9.02e-44 | 162 |
MsG0480018304.01.T01 | MTR_4g024200 | 29.954 | 434 | 227 | 12 | 5 | 372 | 9 | 431 | 2.92e-41 | 155 |
MsG0480018304.01.T01 | MTR_6g042905 | 38.824 | 255 | 141 | 3 | 299 | 552 | 181 | 421 | 2.51e-43 | 160 |
MsG0480018304.01.T01 | MTR_6g042905 | 28.846 | 364 | 236 | 11 | 6 | 360 | 21 | 370 | 4.31e-24 | 105 |
MsG0480018304.01.T01 | MTR_6g016740 | 38.433 | 268 | 135 | 5 | 285 | 552 | 142 | 379 | 2.15e-42 | 156 |
MsG0480018304.01.T01 | MTR_6g016740 | 27.424 | 361 | 239 | 10 | 33 | 385 | 29 | 374 | 1.70e-18 | 88.2 |
MsG0480018304.01.T01 | MTR_3g110148 | 46.893 | 177 | 92 | 2 | 379 | 554 | 190 | 365 | 4.06e-42 | 155 |
MsG0480018304.01.T01 | MTR_3g110148 | 27.195 | 353 | 203 | 9 | 1 | 317 | 1 | 335 | 3.92e-30 | 122 |
MsG0480018304.01.T01 | MTR_5g068550 | 40.756 | 238 | 128 | 4 | 7 | 233 | 8 | 243 | 6.10e-42 | 153 |
MsG0480018304.01.T01 | MTR_4g021765 | 33.333 | 303 | 173 | 7 | 255 | 555 | 46 | 321 | 6.21e-42 | 154 |
MsG0480018304.01.T01 | MTR_4g021765 | 39.048 | 105 | 64 | 0 | 124 | 228 | 3 | 107 | 1.19e-13 | 72.8 |
MsG0480018304.01.T01 | MTR_6g027420 | 34.218 | 339 | 193 | 9 | 6 | 316 | 24 | 360 | 1.39e-41 | 156 |
MsG0480018304.01.T01 | MTR_6g027420 | 43.636 | 220 | 122 | 2 | 337 | 555 | 247 | 465 | 3.54e-38 | 147 |
MsG0480018304.01.T01 | MTR_4g129140 | 34.230 | 409 | 164 | 14 | 120 | 518 | 107 | 420 | 1.72e-40 | 152 |
MsG0480018304.01.T01 | MTR_5g067490 | 36.944 | 360 | 192 | 13 | 22 | 362 | 8 | 351 | 3.41e-40 | 150 |
MsG0480018304.01.T01 | MTR_4g021835 | 36.015 | 261 | 153 | 4 | 6 | 253 | 26 | 285 | 7.64e-40 | 151 |
MsG0480018304.01.T01 | MTR_4g021835 | 31.765 | 255 | 148 | 3 | 327 | 555 | 194 | 448 | 1.97e-27 | 115 |
MsG0480018304.01.T01 | MTR_7g029085 | 35.484 | 310 | 175 | 10 | 5 | 293 | 19 | 324 | 1.35e-39 | 147 |
MsG0480018304.01.T01 | MTR_7g029075 | 35.484 | 310 | 175 | 10 | 5 | 293 | 19 | 324 | 1.35e-39 | 147 |
MsG0480018304.01.T01 | MTR_8g076010 | 32.425 | 367 | 214 | 11 | 7 | 360 | 16 | 361 | 2.09e-39 | 149 |
MsG0480018304.01.T01 | MTR_8g076010 | 35.889 | 287 | 154 | 8 | 296 | 555 | 144 | 427 | 2.02e-36 | 141 |
MsG0480018304.01.T01 | MTR_7g044870 | 43.350 | 203 | 109 | 3 | 324 | 523 | 182 | 381 | 2.55e-39 | 148 |
MsG0480018304.01.T01 | MTR_7g044870 | 27.869 | 366 | 214 | 13 | 3 | 360 | 24 | 347 | 1.39e-19 | 91.7 |
MsG0480018304.01.T01 | MTR_1g023530 | 40.976 | 205 | 99 | 1 | 351 | 555 | 258 | 440 | 1.14e-38 | 147 |
MsG0480018304.01.T01 | MTR_1g023530 | 30.867 | 392 | 230 | 8 | 6 | 369 | 31 | 409 | 6.60e-38 | 145 |
MsG0480018304.01.T01 | MTR_7g100890 | 29.476 | 458 | 265 | 13 | 111 | 550 | 4 | 421 | 5.08e-38 | 147 |
MsG0480018304.01.T01 | MTR_4g435338 | 42.778 | 180 | 99 | 2 | 377 | 555 | 131 | 307 | 2.62e-35 | 135 |
MsG0480018304.01.T01 | MTR_4g435338 | 24.473 | 237 | 149 | 5 | 6 | 217 | 33 | 264 | 3.27e-11 | 65.1 |
MsG0480018304.01.T01 | MTR_3g081430 | 43.523 | 193 | 101 | 3 | 257 | 449 | 90 | 274 | 3.97e-35 | 134 |
MsG0480018304.01.T01 | MTR_4g008450 | 40.343 | 233 | 127 | 5 | 329 | 555 | 60 | 286 | 7.43e-34 | 130 |
MsG0480018304.01.T01 | MTR_4g008450 | 32.065 | 184 | 97 | 6 | 6 | 178 | 19 | 185 | 2.79e-12 | 68.2 |
MsG0480018304.01.T01 | MTR_3g081260 | 41.053 | 190 | 97 | 4 | 273 | 450 | 21 | 207 | 1.42e-33 | 128 |
MsG0480018304.01.T01 | MTR_3g081260 | 52.326 | 86 | 41 | 0 | 465 | 550 | 149 | 234 | 6.80e-22 | 95.5 |
MsG0480018304.01.T01 | MTR_4g008490 | 53.906 | 128 | 55 | 3 | 427 | 551 | 26 | 152 | 3.65e-33 | 125 |
MsG0480018304.01.T01 | MTR_5g087540 | 39.091 | 220 | 103 | 4 | 330 | 545 | 27 | 219 | 9.51e-33 | 125 |
MsG0480018304.01.T01 | MTR_2g104970 | 48.120 | 133 | 68 | 1 | 419 | 550 | 19 | 151 | 9.78e-33 | 124 |
MsG0480018304.01.T01 | MTR_4g008420 | 49.640 | 139 | 68 | 2 | 418 | 555 | 153 | 290 | 1.34e-32 | 127 |
MsG0480018304.01.T01 | MTR_4g008420 | 26.909 | 275 | 122 | 5 | 6 | 226 | 33 | 282 | 2.08e-14 | 74.7 |
MsG0480018304.01.T01 | MTR_4g011120 | 38.424 | 203 | 114 | 6 | 7 | 200 | 9 | 209 | 1.52e-32 | 124 |
MsG0480018304.01.T01 | MTR_4g008600 | 36.820 | 239 | 139 | 4 | 202 | 439 | 1 | 228 | 5.02e-31 | 122 |
MsG0480018304.01.T01 | MTR_4g008330 | 45.139 | 144 | 78 | 1 | 413 | 555 | 3 | 146 | 7.76e-31 | 118 |
MsG0480018304.01.T01 | MTR_4g024220 | 46.753 | 154 | 80 | 2 | 401 | 553 | 34 | 186 | 3.71e-30 | 117 |
MsG0480018304.01.T01 | MTR_4g035280 | 39.604 | 202 | 113 | 4 | 7 | 200 | 28 | 228 | 3.71e-30 | 119 |
MsG0480018304.01.T01 | MTR_8g060730 | 30.411 | 365 | 199 | 11 | 7 | 354 | 9 | 335 | 3.80e-30 | 121 |
MsG0480018304.01.T01 | MTR_8g060730 | 28.875 | 329 | 163 | 13 | 225 | 529 | 48 | 329 | 1.57e-18 | 87.4 |
MsG0480018304.01.T01 | MTR_3g110150 | 46.429 | 140 | 70 | 2 | 419 | 555 | 140 | 277 | 4.54e-30 | 120 |
MsG0480018304.01.T01 | MTR_6g080560 | 48.175 | 137 | 67 | 1 | 418 | 550 | 151 | 287 | 7.33e-30 | 119 |
MsG0480018304.01.T01 | MTR_6g080560 | 38.411 | 151 | 85 | 1 | 7 | 149 | 8 | 158 | 1.18e-22 | 99.0 |
MsG0480018304.01.T01 | MTR_4g008400 | 47.482 | 139 | 72 | 1 | 418 | 555 | 147 | 285 | 1.33e-29 | 119 |
MsG0480018304.01.T01 | MTR_4g008400 | 28.226 | 248 | 151 | 6 | 6 | 228 | 7 | 252 | 1.16e-18 | 87.4 |
MsG0480018304.01.T01 | MTR_4g006250 | 44.853 | 136 | 74 | 1 | 421 | 555 | 1 | 136 | 2.23e-29 | 113 |
MsG0480018304.01.T01 | MTR_4g008340 | 39.877 | 163 | 90 | 1 | 393 | 555 | 158 | 312 | 2.56e-29 | 119 |
MsG0480018304.01.T01 | MTR_4g008340 | 30.182 | 275 | 138 | 6 | 6 | 227 | 32 | 305 | 3.61e-20 | 92.0 |
MsG0480018304.01.T01 | MTR_6g016760 | 45.161 | 155 | 82 | 3 | 368 | 521 | 1 | 153 | 2.58e-29 | 116 |
MsG0480018304.01.T01 | MTR_1g075040 | 44.079 | 152 | 85 | 0 | 299 | 450 | 212 | 363 | 5.64e-29 | 118 |
MsG0480018304.01.T01 | MTR_1g075040 | 32.143 | 224 | 148 | 2 | 7 | 226 | 56 | 279 | 1.18e-27 | 114 |
MsG0480018304.01.T01 | MTR_4g010410 | 39.500 | 200 | 106 | 5 | 11 | 200 | 32 | 226 | 9.13e-29 | 114 |
MsG0480018304.01.T01 | MTR_1g028400 | 31.454 | 337 | 203 | 8 | 6 | 317 | 116 | 449 | 1.25e-28 | 119 |
MsG0480018304.01.T01 | MTR_1g028400 | 31.783 | 258 | 137 | 5 | 299 | 549 | 249 | 474 | 1.23e-16 | 83.2 |
MsG0480018304.01.T01 | MTR_4g010630 | 38.235 | 204 | 115 | 6 | 7 | 200 | 9 | 211 | 1.91e-26 | 107 |
MsG0480018304.01.T01 | MTR_4g010590 | 38.235 | 204 | 115 | 6 | 7 | 201 | 10 | 211 | 1.93e-26 | 107 |
MsG0480018304.01.T01 | MTR_8g067230 | 45.690 | 116 | 63 | 0 | 435 | 550 | 181 | 296 | 6.96e-26 | 108 |
MsG0480018304.01.T01 | MTR_8g067230 | 39.175 | 194 | 98 | 6 | 133 | 322 | 25 | 202 | 1.37e-20 | 93.2 |
MsG0480018304.01.T01 | MTR_4g008440 | 41.096 | 146 | 81 | 2 | 6 | 146 | 7 | 152 | 2.44e-25 | 105 |
MsG0480018304.01.T01 | MTR_4g008440 | 42.553 | 94 | 54 | 0 | 407 | 500 | 137 | 230 | 1.84e-14 | 73.6 |
MsG0480018304.01.T01 | MTR_4g035290 | 37.255 | 204 | 118 | 4 | 6 | 200 | 27 | 229 | 5.54e-25 | 106 |
MsG0480018304.01.T01 | MTR_4g010970 | 42.029 | 138 | 77 | 2 | 7 | 141 | 31 | 168 | 1.37e-24 | 101 |
MsG0480018304.01.T01 | MTR_6g054950 | 28.857 | 350 | 217 | 9 | 6 | 327 | 22 | 367 | 1.03e-23 | 103 |
MsG0480018304.01.T01 | MTR_6g054950 | 33.865 | 251 | 101 | 7 | 303 | 552 | 184 | 370 | 2.13e-22 | 99.8 |
MsG0480018304.01.T01 | MTR_0295s0010 | 41.176 | 136 | 78 | 2 | 385 | 518 | 1 | 136 | 1.04e-23 | 100 |
MsG0480018304.01.T01 | MTR_6g016765 | 37.173 | 191 | 91 | 3 | 7 | 192 | 68 | 234 | 1.86e-23 | 99.8 |
MsG0480018304.01.T01 | MTR_4g006280 | 39.583 | 144 | 83 | 2 | 404 | 546 | 177 | 317 | 3.78e-23 | 100 |
MsG0480018304.01.T01 | MTR_4g010710 | 33.051 | 236 | 111 | 5 | 7 | 204 | 8 | 234 | 3.94e-23 | 99.4 |
MsG0480018304.01.T01 | MTR_8g446780 | 38.798 | 183 | 105 | 3 | 345 | 526 | 52 | 228 | 8.59e-23 | 97.8 |
MsG0480018304.01.T01 | MTR_4g012820 | 36.364 | 176 | 92 | 4 | 170 | 345 | 2 | 157 | 1.26e-22 | 95.9 |
MsG0480018304.01.T01 | MTR_4g010615 | 33.061 | 245 | 124 | 8 | 7 | 212 | 27 | 270 | 1.55e-22 | 98.2 |
MsG0480018304.01.T01 | MTR_6g018580 | 40.816 | 147 | 81 | 3 | 7 | 148 | 33 | 178 | 1.59e-22 | 96.3 |
MsG0480018304.01.T01 | MTR_4g006210 | 38.953 | 172 | 98 | 2 | 327 | 492 | 164 | 334 | 1.74e-22 | 101 |
MsG0480018304.01.T01 | MTR_4g006210 | 30.000 | 310 | 154 | 9 | 7 | 309 | 33 | 286 | 4.58e-20 | 93.6 |
MsG0480018304.01.T01 | MTR_2g078550 | 47.458 | 118 | 60 | 2 | 379 | 495 | 6 | 122 | 3.51e-22 | 93.2 |
MsG0480018304.01.T01 | MTR_1g069120 | 43.262 | 141 | 73 | 2 | 300 | 435 | 270 | 408 | 6.86e-22 | 99.0 |
MsG0480018304.01.T01 | MTR_1g069120 | 31.718 | 227 | 146 | 5 | 6 | 226 | 113 | 336 | 3.78e-19 | 90.5 |
MsG0480018304.01.T01 | MTR_4g006520 | 40.945 | 127 | 69 | 1 | 7 | 127 | 9 | 135 | 7.27e-22 | 92.8 |
MsG0480018304.01.T01 | MTR_6g016720 | 46.610 | 118 | 61 | 2 | 354 | 470 | 101 | 217 | 8.08e-22 | 95.1 |
MsG0480018304.01.T01 | MTR_4g005810 | 42.222 | 135 | 77 | 1 | 382 | 515 | 11 | 145 | 1.11e-21 | 95.5 |
MsG0480018304.01.T01 | MTR_4g013255 | 22.798 | 579 | 349 | 14 | 22 | 547 | 36 | 569 | 4.56e-21 | 97.8 |
MsG0480018304.01.T01 | MTR_4g010750 | 34.211 | 228 | 107 | 6 | 6 | 199 | 20 | 238 | 7.30e-21 | 93.2 |
MsG0480018304.01.T01 | MTR_5g095790 | 32.287 | 223 | 108 | 5 | 7 | 227 | 21 | 202 | 8.44e-21 | 92.4 |
MsG0480018304.01.T01 | MTR_4g010510 | 35.450 | 189 | 107 | 4 | 5 | 178 | 11 | 199 | 1.10e-20 | 91.3 |
MsG0480018304.01.T01 | MTR_8g080900 | 42.520 | 127 | 64 | 2 | 5 | 122 | 16 | 142 | 1.52e-20 | 88.6 |
MsG0480018304.01.T01 | MTR_4g010450 | 35.567 | 194 | 107 | 5 | 5 | 181 | 24 | 216 | 3.24e-20 | 90.5 |
MsG0480018304.01.T01 | MTR_7g024310 | 43.590 | 117 | 66 | 0 | 33 | 149 | 2 | 118 | 4.24e-20 | 89.7 |
MsG0480018304.01.T01 | MTR_2g103530 | 48.837 | 86 | 44 | 0 | 470 | 555 | 89 | 174 | 7.91e-20 | 88.2 |
MsG0480018304.01.T01 | MTR_4g016660 | 32.472 | 271 | 139 | 11 | 7 | 239 | 11 | 275 | 9.04e-20 | 90.5 |
MsG0480018304.01.T01 | MTR_4g132730 | 45.794 | 107 | 56 | 2 | 447 | 552 | 143 | 248 | 1.21e-19 | 90.5 |
MsG0480018304.01.T01 | MTR_1g042340 | 31.844 | 179 | 114 | 4 | 5 | 177 | 9 | 185 | 2.21e-19 | 87.4 |
MsG0480018304.01.T01 | MTR_4g010460 | 37.162 | 148 | 85 | 2 | 7 | 146 | 32 | 179 | 4.09e-19 | 86.3 |
MsG0480018304.01.T01 | MTR_6g042880 | 37.241 | 145 | 81 | 4 | 7 | 142 | 25 | 168 | 1.19e-18 | 84.0 |
MsG0480018304.01.T01 | MTR_4g008380 | 46.667 | 90 | 48 | 0 | 466 | 555 | 7 | 96 | 1.31e-18 | 82.0 |
MsG0480018304.01.T01 | MTR_8g045170 | 34.375 | 192 | 86 | 1 | 37 | 228 | 75 | 226 | 6.79e-18 | 85.9 |
MsG0480018304.01.T01 | MTR_4g008290 | 43.519 | 108 | 56 | 2 | 5 | 108 | 23 | 129 | 3.52e-16 | 75.5 |
MsG0480018304.01.T01 | MTR_8g446800 | 44.681 | 94 | 49 | 1 | 131 | 221 | 69 | 162 | 4.08e-16 | 76.6 |
MsG0480018304.01.T01 | MTR_6g033270 | 26.693 | 251 | 150 | 8 | 2 | 226 | 6 | 248 | 8.97e-16 | 78.2 |
MsG0480018304.01.T01 | MTR_4g016500 | 28.745 | 247 | 117 | 6 | 5 | 200 | 31 | 269 | 1.49e-15 | 79.7 |
MsG0480018304.01.T01 | MTR_2g021030 | 21.891 | 603 | 383 | 19 | 6 | 548 | 11 | 585 | 1.79e-15 | 80.1 |
MsG0480018304.01.T01 | MTR_3g107280 | 25.000 | 436 | 282 | 15 | 127 | 529 | 173 | 596 | 3.06e-15 | 79.3 |
MsG0480018304.01.T01 | MTR_1155s0010 | 34.646 | 127 | 69 | 2 | 6 | 120 | 15 | 139 | 9.03e-15 | 72.0 |
MsG0480018304.01.T01 | MTR_0345s0020 | 34.646 | 127 | 69 | 2 | 6 | 120 | 15 | 139 | 9.03e-15 | 72.0 |
MsG0480018304.01.T01 | MTR_0105s0110 | 34.646 | 127 | 69 | 2 | 6 | 120 | 15 | 139 | 9.03e-15 | 72.0 |
MsG0480018304.01.T01 | MTR_5g067910 | 39.669 | 121 | 67 | 3 | 120 | 235 | 4 | 123 | 3.16e-14 | 70.1 |
MsG0480018304.01.T01 | MTR_4g009010 | 38.816 | 152 | 82 | 5 | 11 | 151 | 13 | 164 | 8.84e-14 | 69.7 |
MsG0480018304.01.T01 | MTR_4g006460 | 31.963 | 219 | 114 | 7 | 6 | 207 | 17 | 217 | 1.73e-13 | 71.2 |
MsG0480018304.01.T01 | MTR_4g006460 | 36.036 | 111 | 51 | 2 | 417 | 526 | 124 | 215 | 3.62e-11 | 64.3 |
MsG0480018304.01.T01 | MTR_4g010580 | 36.496 | 137 | 65 | 3 | 6 | 120 | 12 | 148 | 2.98e-13 | 68.2 |
MsG0480018304.01.T01 | MTR_6g016900 | 46.341 | 82 | 39 | 2 | 433 | 511 | 27 | 106 | 5.66e-13 | 69.7 |
MsG0480018304.01.T01 | MTR_1g012520 | 23.488 | 430 | 263 | 12 | 154 | 552 | 200 | 594 | 6.75e-13 | 72.0 |
MsG0480018304.01.T01 | MTR_4g008470 | 35.897 | 117 | 67 | 2 | 11 | 119 | 38 | 154 | 1.25e-12 | 68.2 |
MsG0480018304.01.T01 | MTR_4g008480 | 44.086 | 93 | 49 | 2 | 466 | 555 | 177 | 269 | 1.29e-12 | 68.9 |
MsG0480018304.01.T01 | MTR_4g006510 | 44.118 | 68 | 37 | 1 | 484 | 550 | 5 | 72 | 3.03e-12 | 63.5 |
MsG0480018304.01.T01 | MTR_5g067860 | 41.880 | 117 | 61 | 4 | 122 | 233 | 51 | 165 | 6.00e-12 | 66.6 |
MsG0480018304.01.T01 | MTR_2g021030 | 22.876 | 459 | 302 | 18 | 6 | 450 | 11 | 431 | 9.40e-12 | 67.8 |
MsG0480018304.01.T01 | MTR_4g010880 | 27.966 | 236 | 107 | 7 | 6 | 200 | 20 | 233 | 3.39e-11 | 64.3 |
MsG0480018304.01.T01 | MTR_6g018570 | 47.692 | 65 | 34 | 0 | 455 | 519 | 382 | 446 | 4.52e-11 | 65.5 |
MsG0480018304.01.T01 | MTR_0041s0060 | 46.429 | 56 | 30 | 0 | 467 | 522 | 1 | 56 | 5.58e-11 | 58.5 |
MsG0480018304.01.T01 | MTR_7g112570 | 23.037 | 573 | 348 | 15 | 23 | 530 | 64 | 608 | 6.77e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480018304.01.T01 | AT1G80630 | 39.350 | 554 | 308 | 10 | 5 | 552 | 2 | 533 | 3.28e-100 | 315 |
MsG0480018304.01.T01 | AT4G15475 | 23.792 | 559 | 356 | 17 | 6 | 526 | 11 | 537 | 1.06e-18 | 90.1 |
MsG0480018304.01.T01 | AT5G23340 | 24.433 | 397 | 231 | 13 | 8 | 367 | 14 | 378 | 5.19e-13 | 71.6 |
MsG0480018304.01.T01 | AT2G25490 | 22.084 | 403 | 256 | 10 | 154 | 530 | 188 | 558 | 3.96e-12 | 69.3 |
MsG0480018304.01.T01 | AT5G01720 | 20.536 | 560 | 374 | 10 | 23 | 530 | 34 | 574 | 4.38e-11 | 66.2 |
Find 92 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCGCAAAATTGATCTTTC+TGG | 0.167851 | 4:+3146875 | MsG0480018304.01.T01:CDS |
GATTCTCAAGCATCTGATTT+TGG | 0.170483 | 4:+3146821 | MsG0480018304.01.T01:CDS |
CATCAACTGGAAGTGTTCTT+TGG | 0.247036 | 4:-3146658 | None:intergenic |
CAAGTAAAAGTGGTTTATTT+TGG | 0.258371 | 4:+3147538 | MsG0480018304.01.T01:CDS |
ATTTCTCGTGAGTATGAAAA+AGG | 0.290298 | 4:-3147419 | None:intergenic |
TGATTTGGAATCTGTTTCTA+TGG | 0.313903 | 4:+3146430 | MsG0480018304.01.T01:CDS |
TCGATCAAATCCAAGTTAAT+AGG | 0.319571 | 4:-3147094 | None:intergenic |
TCTTGGCCAAGGACATGATT+TGG | 0.329085 | 4:+3146415 | MsG0480018304.01.T01:CDS |
CAAAGAACACTTCCAGTTGA+TGG | 0.329298 | 4:+3146659 | MsG0480018304.01.T01:CDS |
GTGCACTGGGCTAATGTTAT+TGG | 0.332372 | 4:+3147828 | MsG0480018304.01.T01:CDS |
TAAGTCAAGCAGTTGTAAAC+TGG | 0.332569 | 4:-3147614 | None:intergenic |
ACAAGTTTAACACCTTCAAT+TGG | 0.343271 | 4:-3147759 | None:intergenic |
CTTCCAGTGATCTACAGTTC+TGG | 0.345552 | 4:-3146937 | None:intergenic |
ATTGATTCCCAATATGCTTC+AGG | 0.351890 | 4:-3146383 | None:intergenic |
TCACTGTTCTATTCCTTCCT+TGG | 0.357063 | 4:+3146513 | MsG0480018304.01.T01:CDS |
TAAAGTTGCAACAGTCTTGC+AGG | 0.359047 | 4:-3147231 | None:intergenic |
CTTCATCAAATTTCACAATC+GGG | 0.381686 | 4:+3146605 | MsG0480018304.01.T01:CDS |
GCTTGACATTAGCTTTCCTT+TGG | 0.382621 | 4:+3146799 | MsG0480018304.01.T01:CDS |
TAACTTGGTTTGTAATAGAA+AGG | 0.388583 | 4:-3146466 | None:intergenic |
AGAACGTATATCGGAGTAGA+AGG | 0.389539 | 4:+3147472 | MsG0480018304.01.T01:CDS |
GATCCGAATGAGGCCAAGTT+TGG | 0.390068 | 4:+3147012 | MsG0480018304.01.T01:CDS |
CTTTGAAGTTTCCCAATTGA+AGG | 0.390579 | 4:+3147747 | MsG0480018304.01.T01:CDS |
ATGTCAAGCTCTTCAAGAAA+TGG | 0.392921 | 4:-3146785 | None:intergenic |
AGAAAGATAATCACACCTTC+TGG | 0.402096 | 4:+3147997 | MsG0480018304.01.T01:CDS |
GCTTCATCAAATTTCACAAT+CGG | 0.404509 | 4:+3146604 | MsG0480018304.01.T01:CDS |
GCGTTGAACATATTGACATT+TGG | 0.406000 | 4:-3147281 | None:intergenic |
CTTACCAAGTGAGATCAAAA+TGG | 0.409582 | 4:+3147447 | MsG0480018304.01.T01:CDS |
CATTTAAACCTTGCATATAC+AGG | 0.410128 | 4:+3147703 | MsG0480018304.01.T01:CDS |
TTGAAGGTGTTAAACTTGTC+AGG | 0.416648 | 4:+3147763 | MsG0480018304.01.T01:CDS |
TATTGGACATTCAAAATTGT+TGG | 0.417142 | 4:+3147845 | MsG0480018304.01.T01:CDS |
CTCTCTTCGCGATAGCCATC+TGG | 0.420418 | 4:+3146742 | MsG0480018304.01.T01:CDS |
CAAGTTTAACACCTTCAATT+GGG | 0.427592 | 4:-3147758 | None:intergenic |
AACTGGAAGTGTTCTTTGGT+TGG | 0.428158 | 4:-3146654 | None:intergenic |
GACACCCCTACCTATTAACT+TGG | 0.429577 | 4:+3147084 | MsG0480018304.01.T01:CDS |
ATGTTACAGCTAAGGGAGTA+AGG | 0.431996 | 4:+3147869 | MsG0480018304.01.T01:CDS |
TAGAGACAAAAGAGATTTAT+CGG | 0.435030 | 4:-3146912 | None:intergenic |
AGTCACTTCAATGGTGAACT+AGG | 0.440919 | 4:+3146575 | MsG0480018304.01.T01:CDS |
AAGCCAAACTTGGCCTCATT+CGG | 0.441720 | 4:-3147015 | None:intergenic |
AAATTTAAGCAATTGCAGTT+TGG | 0.444941 | 4:+3147927 | MsG0480018304.01.T01:CDS |
AATGCTTGTGAGGGTATCTC+TGG | 0.448350 | 4:+3147637 | MsG0480018304.01.T01:CDS |
TCAAATTTCACAATCGGGGT+TGG | 0.455199 | 4:+3146610 | MsG0480018304.01.T01:CDS |
AGTTCTCGCAATCCATCAAC+TGG | 0.455999 | 4:-3146671 | None:intergenic |
CGTCAACCATCAAGTAAAAG+TGG | 0.459830 | 4:+3147528 | MsG0480018304.01.T01:CDS |
TTTAAGCAATTGCAGTTTGG+TGG | 0.465947 | 4:+3147930 | MsG0480018304.01.T01:CDS |
CTTGGGATATCTTGAAACAT+TGG | 0.470974 | 4:-3146973 | None:intergenic |
TACAAAGATGATAAACTTGA+GGG | 0.473135 | 4:+3146697 | MsG0480018304.01.T01:CDS |
AAAATGGAGAGAACGTATAT+CGG | 0.476625 | 4:+3147463 | MsG0480018304.01.T01:CDS |
CAAATCCAAGTTAATAGGTA+GGG | 0.483726 | 4:-3147089 | None:intergenic |
ATAATCTCAAAGTGGTGCAC+TGG | 0.484164 | 4:+3147814 | MsG0480018304.01.T01:CDS |
TCGCAGAAGCAATTCCAACT+TGG | 0.488336 | 4:-3146991 | None:intergenic |
AAGGATATCGAAGCCAAACT+TGG | 0.491653 | 4:-3147025 | None:intergenic |
AAAAGGTTGAGTTTGTTAGC+TGG | 0.493699 | 4:-3147402 | None:intergenic |
TGTTGGTATGTTACAGCTAA+GGG | 0.497684 | 4:+3147862 | MsG0480018304.01.T01:CDS |
CAGATTCCAAATCATGTCCT+TGG | 0.499198 | 4:-3146421 | None:intergenic |
GGTTTAAATGTCTTATCTCA+TGG | 0.506491 | 4:-3147690 | None:intergenic |
TTGTTGGTATGTTACAGCTA+AGG | 0.509623 | 4:+3147861 | MsG0480018304.01.T01:CDS |
TTGACCTCTATAAACCTTAG+CGG | 0.520785 | 4:+3147373 | MsG0480018304.01.T01:CDS |
GTGATTATCTTTCTCAAGGA+AGG | 0.526844 | 4:-3147988 | None:intergenic |
TGGAAAGATTAATCAAATCA+AGG | 0.526990 | 4:-3146634 | None:intergenic |
ATGCCAGAACTGTAGATCAC+TGG | 0.527608 | 4:+3146934 | MsG0480018304.01.T01:CDS |
TAATCTCAAAGTGGTGCACT+GGG | 0.527993 | 4:+3147815 | MsG0480018304.01.T01:CDS |
TTTCTTATCTCAGTTGCAAA+CGG | 0.531599 | 4:+3147181 | MsG0480018304.01.T01:CDS |
CGCAGAAGCAATTCCAACTT+GGG | 0.534334 | 4:-3146990 | None:intergenic |
TCAAATCCAAGTTAATAGGT+AGG | 0.534727 | 4:-3147090 | None:intergenic |
TTTCAATTCCTGTATATGCA+AGG | 0.548877 | 4:-3147711 | None:intergenic |
ACAACCGCTAAGGTTTATAG+AGG | 0.549249 | 4:-3147377 | None:intergenic |
TTAGCTGGCAACAACCGCTA+AGG | 0.557448 | 4:-3147387 | None:intergenic |
TTGCTTCTGCGATCCGAATG+AGG | 0.558661 | 4:+3147002 | MsG0480018304.01.T01:CDS |
CACTCTCAATAATCTCAAAG+TGG | 0.560806 | 4:+3147806 | MsG0480018304.01.T01:CDS |
AGGTGTGATTATCTTTCTCA+AGG | 0.565684 | 4:-3147992 | None:intergenic |
CTCTGGAGAATGTATTGTTG+AGG | 0.566951 | 4:+3147654 | MsG0480018304.01.T01:CDS |
GTACAAAGATGATAAACTTG+AGG | 0.567438 | 4:+3146696 | MsG0480018304.01.T01:CDS |
TTGTTAGAGAGAATTTAACT+TGG | 0.571534 | 4:-3146481 | None:intergenic |
GTTGATGGATTGCGAGAACT+CGG | 0.572757 | 4:+3146674 | MsG0480018304.01.T01:CDS |
TTTGTGAACTAATACATACA+AGG | 0.573819 | 4:+3147965 | MsG0480018304.01.T01:CDS |
TGTTACAGCTAAGGGAGTAA+GGG | 0.575562 | 4:+3147870 | MsG0480018304.01.T01:CDS |
TTCATCAAATTTCACAATCG+GGG | 0.576754 | 4:+3146606 | MsG0480018304.01.T01:CDS |
TTTGCGCAGATTCTCGAGCA+TGG | 0.577290 | 4:-3146861 | None:intergenic |
GGAAGATTCCAACTCCATGT+TGG | 0.578133 | 4:+3147498 | MsG0480018304.01.T01:CDS |
ATCTCGAGAGTAGCCAAGGA+AGG | 0.581997 | 4:-3146526 | None:intergenic |
ACATTGATCAGTTAGAAAGT+CGG | 0.587277 | 4:-3147320 | None:intergenic |
AAATCCAAGTTAATAGGTAG+GGG | 0.587954 | 4:-3147088 | None:intergenic |
AGCAATTGCAGTTTGGTGGA+TGG | 0.588014 | 4:+3147934 | MsG0480018304.01.T01:CDS |
GCTTGACTTAAATGCTTGTG+AGG | 0.598035 | 4:+3147627 | MsG0480018304.01.T01:CDS |
TGTTTCAAGATATCCCAAGT+TGG | 0.598398 | 4:+3146977 | MsG0480018304.01.T01:CDS |
ATAGGTAGGGGTGTCAAACC+AGG | 0.600220 | 4:-3147076 | None:intergenic |
CACTTCAATGGTGAACTAGG+AGG | 0.629712 | 4:+3146578 | MsG0480018304.01.T01:CDS |
TCAGATGCTTGAGAATCCAA+AGG | 0.642274 | 4:-3146815 | None:intergenic |
GTATATCGGAGTAGAAGGTG+AGG | 0.647616 | 4:+3147477 | MsG0480018304.01.T01:CDS |
AACAAGCTATCACTACCAGA+TGG | 0.654342 | 4:-3146757 | None:intergenic |
CTTGACTTAAATGCTTGTGA+GGG | 0.668482 | 4:+3147628 | MsG0480018304.01.T01:CDS |
AAGAAAAGAATACATAGACC+TGG | 0.674796 | 4:+3147058 | MsG0480018304.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTGTCAAATTCTTTTATAT+CGG | + | Chr4:3147153-3147172 | MsG0480018304.01.T01:CDS | 15.0% |
!!! | TCTTTTCTTTTCAATGTTAA+AGG | - | Chr4:3147047-3147066 | None:intergenic | 20.0% |
! | AAATTTAAGCAATTGCAGTT+TGG | + | Chr4:3147927-3147946 | MsG0480018304.01.T01:CDS | 25.0% |
! | TACAAAGATGATAAACTTGA+GGG | + | Chr4:3146697-3146716 | MsG0480018304.01.T01:CDS | 25.0% |
! | TAGAGACAAAAGAGATTTAT+CGG | - | Chr4:3146915-3146934 | None:intergenic | 25.0% |
! | TATTGGACATTCAAAATTGT+TGG | + | Chr4:3147845-3147864 | MsG0480018304.01.T01:CDS | 25.0% |
! | TGGAAAGATTAATCAAATCA+AGG | - | Chr4:3146637-3146656 | None:intergenic | 25.0% |
! | TTGTTAGAGAGAATTTAACT+TGG | - | Chr4:3146484-3146503 | None:intergenic | 25.0% |
! | TTTGTGAACTAATACATACA+AGG | + | Chr4:3147965-3147984 | MsG0480018304.01.T01:CDS | 25.0% |
!! | CAAGTAAAAGTGGTTTATTT+TGG | + | Chr4:3147538-3147557 | MsG0480018304.01.T01:CDS | 25.0% |
!! | CATCTGATTTTGGATTAATA+AGG | + | Chr4:3146831-3146850 | MsG0480018304.01.T01:CDS | 25.0% |
!! | GAATCAATTTTCAGATTTCT+TGG | + | Chr4:3146398-3146417 | MsG0480018304.01.T01:CDS | 25.0% |
!!! | AATAAACCACTTTTACTTGA+TGG | - | Chr4:3147537-3147556 | None:intergenic | 25.0% |
!!! | ATAGATTTTAGTCACTTCAA+TGG | + | Chr4:3146566-3146585 | MsG0480018304.01.T01:CDS | 25.0% |
!!! | TAACTTGGTTTGTAATAGAA+AGG | - | Chr4:3146469-3146488 | None:intergenic | 25.0% |
AAAATGGAGAGAACGTATAT+CGG | + | Chr4:3147463-3147482 | MsG0480018304.01.T01:CDS | 30.0% | |
AAATCCAAGTTAATAGGTAG+GGG | - | Chr4:3147091-3147110 | None:intergenic | 30.0% | |
AAGAAAAGAATACATAGACC+TGG | + | Chr4:3147058-3147077 | MsG0480018304.01.T01:CDS | 30.0% | |
ACAAGTTTAACACCTTCAAT+TGG | - | Chr4:3147762-3147781 | None:intergenic | 30.0% | |
ACATTGATCAGTTAGAAAGT+CGG | - | Chr4:3147323-3147342 | None:intergenic | 30.0% | |
ATTTCTCGTGAGTATGAAAA+AGG | - | Chr4:3147422-3147441 | None:intergenic | 30.0% | |
CAAATCCAAGTTAATAGGTA+GGG | - | Chr4:3147092-3147111 | None:intergenic | 30.0% | |
CAAGTTTAACACCTTCAATT+GGG | - | Chr4:3147761-3147780 | None:intergenic | 30.0% | |
CAATAAAAATCAACACCAGA+AGG | - | Chr4:3148015-3148034 | None:intergenic | 30.0% | |
CATTTAAACCTTGCATATAC+AGG | + | Chr4:3147703-3147722 | MsG0480018304.01.T01:CDS | 30.0% | |
CTTCATCAAATTTCACAATC+GGG | + | Chr4:3146605-3146624 | MsG0480018304.01.T01:CDS | 30.0% | |
GCTTCATCAAATTTCACAAT+CGG | + | Chr4:3146604-3146623 | MsG0480018304.01.T01:CDS | 30.0% | |
GGTTTAAATGTCTTATCTCA+TGG | - | Chr4:3147693-3147712 | None:intergenic | 30.0% | |
GTACAAAGATGATAAACTTG+AGG | + | Chr4:3146696-3146715 | MsG0480018304.01.T01:CDS | 30.0% | |
TCAAATCCAAGTTAATAGGT+AGG | - | Chr4:3147093-3147112 | None:intergenic | 30.0% | |
TCGATCAAATCCAAGTTAAT+AGG | - | Chr4:3147097-3147116 | None:intergenic | 30.0% | |
TTCATCAAATTTCACAATCG+GGG | + | Chr4:3146606-3146625 | MsG0480018304.01.T01:CDS | 30.0% | |
TTTCAATTCCTGTATATGCA+AGG | - | Chr4:3147714-3147733 | None:intergenic | 30.0% | |
TTTCTTATCTCAGTTGCAAA+CGG | + | Chr4:3147181-3147200 | MsG0480018304.01.T01:CDS | 30.0% | |
! | AAGATTTTCCTGAAGCATAT+TGG | + | Chr4:3146375-3146394 | MsG0480018304.01.T01:CDS | 30.0% |
! | AGATTTTCCTGAAGCATATT+GGG | + | Chr4:3146376-3146395 | MsG0480018304.01.T01:CDS | 30.0% |
! | TGTTGCAACTTTACATTTTC+AGG | + | Chr4:3147241-3147260 | MsG0480018304.01.T01:CDS | 30.0% |
!! | ATTTTGATCTCACTTGGTAA+GGG | - | Chr4:3147448-3147467 | None:intergenic | 30.0% |
!! | TGATTTGGAATCTGTTTCTA+TGG | + | Chr4:3146430-3146449 | MsG0480018304.01.T01:CDS | 30.0% |
AGAAAGATAATCACACCTTC+TGG | + | Chr4:3147997-3148016 | MsG0480018304.01.T01:CDS | 35.0% | |
AGGTGTGATTATCTTTCTCA+AGG | - | Chr4:3147995-3148014 | None:intergenic | 35.0% | |
ATGTCAAGCTCTTCAAGAAA+TGG | - | Chr4:3146788-3146807 | None:intergenic | 35.0% | |
CACTCTCAATAATCTCAAAG+TGG | + | Chr4:3147806-3147825 | MsG0480018304.01.T01:CDS | 35.0% | |
CTTACCAAGTGAGATCAAAA+TGG | + | Chr4:3147447-3147466 | MsG0480018304.01.T01:CDS | 35.0% | |
CTTGACTTAAATGCTTGTGA+GGG | + | Chr4:3147628-3147647 | MsG0480018304.01.T01:CDS | 35.0% | |
CTTGGGATATCTTGAAACAT+TGG | - | Chr4:3146976-3146995 | None:intergenic | 35.0% | |
GAAAAAATCCAACATGGAGT+TGG | - | Chr4:3147509-3147528 | None:intergenic | 35.0% | |
GCGTTGAACATATTGACATT+TGG | - | Chr4:3147284-3147303 | None:intergenic | 35.0% | |
GTGATTATCTTTCTCAAGGA+AGG | - | Chr4:3147991-3148010 | None:intergenic | 35.0% | |
GTTGACGAAAAAATCCAACA+TGG | - | Chr4:3147515-3147534 | None:intergenic | 35.0% | |
TAAGTCAAGCAGTTGTAAAC+TGG | - | Chr4:3147617-3147636 | None:intergenic | 35.0% | |
TGTTGGTATGTTACAGCTAA+GGG | + | Chr4:3147862-3147881 | MsG0480018304.01.T01:CDS | 35.0% | |
TGTTTCAAGATATCCCAAGT+TGG | + | Chr4:3146977-3146996 | MsG0480018304.01.T01:CDS | 35.0% | |
TTGACCTCTATAAACCTTAG+CGG | + | Chr4:3147373-3147392 | MsG0480018304.01.T01:CDS | 35.0% | |
TTGTTGGTATGTTACAGCTA+AGG | + | Chr4:3147861-3147880 | MsG0480018304.01.T01:CDS | 35.0% | |
TTTAAGCAATTGCAGTTTGG+TGG | + | Chr4:3147930-3147949 | MsG0480018304.01.T01:CDS | 35.0% | |
! | ATTGATTCCCAATATGCTTC+AGG | - | Chr4:3146386-3146405 | None:intergenic | 35.0% |
! | ATTTTCAGATTTCTTGGCCA+AGG | + | Chr4:3146404-3146423 | MsG0480018304.01.T01:CDS | 35.0% |
! | GATTCTCAAGCATCTGATTT+TGG | + | Chr4:3146821-3146840 | MsG0480018304.01.T01:CDS | 35.0% |
!! | AAAAGGTTGAGTTTGTTAGC+TGG | - | Chr4:3147405-3147424 | None:intergenic | 35.0% |
!! | CATTTTGATCTCACTTGGTA+AGG | - | Chr4:3147449-3147468 | None:intergenic | 35.0% |
!! | CTTTGAAGTTTCCCAATTGA+AGG | + | Chr4:3147747-3147766 | MsG0480018304.01.T01:CDS | 35.0% |
!! | TTGAAGGTGTTAAACTTGTC+AGG | + | Chr4:3147763-3147782 | MsG0480018304.01.T01:CDS | 35.0% |
!!! | GTTTTGATTTGCTCAAACGT+TGG | + | Chr4:3146719-3146738 | MsG0480018304.01.T01:CDS | 35.0% |
AAAAATCTCGAGAGTAGCCA+AGG | - | Chr4:3146533-3146552 | None:intergenic | 40.0% | |
AACAAGCTATCACTACCAGA+TGG | - | Chr4:3146760-3146779 | None:intergenic | 40.0% | |
AAGGATATCGAAGCCAAACT+TGG | - | Chr4:3147028-3147047 | None:intergenic | 40.0% | |
ACAACCGCTAAGGTTTATAG+AGG | - | Chr4:3147380-3147399 | None:intergenic | 40.0% | |
AGAACGTATATCGGAGTAGA+AGG | + | Chr4:3147472-3147491 | MsG0480018304.01.T01:CDS | 40.0% | |
AGTCACTTCAATGGTGAACT+AGG | + | Chr4:3146575-3146594 | MsG0480018304.01.T01:CDS | 40.0% | |
ATAATCTCAAAGTGGTGCAC+TGG | + | Chr4:3147814-3147833 | MsG0480018304.01.T01:CDS | 40.0% | |
ATGTTACAGCTAAGGGAGTA+AGG | + | Chr4:3147869-3147888 | MsG0480018304.01.T01:CDS | 40.0% | |
CAAAGAACACTTCCAGTTGA+TGG | + | Chr4:3146659-3146678 | MsG0480018304.01.T01:CDS | 40.0% | |
CAGATTCCAAATCATGTCCT+TGG | - | Chr4:3146424-3146443 | None:intergenic | 40.0% | |
CGTCAACCATCAAGTAAAAG+TGG | + | Chr4:3147528-3147547 | MsG0480018304.01.T01:CDS | 40.0% | |
CTGCGCAAAATTGATCTTTC+TGG | + | Chr4:3146875-3146894 | MsG0480018304.01.T01:CDS | 40.0% | |
GCTTGACTTAAATGCTTGTG+AGG | + | Chr4:3147627-3147646 | MsG0480018304.01.T01:CDS | 40.0% | |
TAAAGTTGCAACAGTCTTGC+AGG | - | Chr4:3147234-3147253 | None:intergenic | 40.0% | |
TAATCTCAAAGTGGTGCACT+GGG | + | Chr4:3147815-3147834 | MsG0480018304.01.T01:CDS | 40.0% | |
TCAAATTTCACAATCGGGGT+TGG | + | Chr4:3146610-3146629 | MsG0480018304.01.T01:CDS | 40.0% | |
TCACTGTTCTATTCCTTCCT+TGG | + | Chr4:3146513-3146532 | MsG0480018304.01.T01:CDS | 40.0% | |
TCAGATGCTTGAGAATCCAA+AGG | - | Chr4:3146818-3146837 | None:intergenic | 40.0% | |
TGTTACAGCTAAGGGAGTAA+GGG | + | Chr4:3147870-3147889 | MsG0480018304.01.T01:CDS | 40.0% | |
! | CTCTGGAGAATGTATTGTTG+AGG | + | Chr4:3147654-3147673 | MsG0480018304.01.T01:CDS | 40.0% |
! | GGCTACTCTCGAGATTTTTA+AGG | + | Chr4:3146534-3146553 | MsG0480018304.01.T01:CDS | 40.0% |
!! | AACTGGAAGTGTTCTTTGGT+TGG | - | Chr4:3146657-3146676 | None:intergenic | 40.0% |
!! | CATCAACTGGAAGTGTTCTT+TGG | - | Chr4:3146661-3146680 | None:intergenic | 40.0% |
!! | CTCTCCATTTTGATCTCACT+TGG | - | Chr4:3147454-3147473 | None:intergenic | 40.0% |
!! | GCTTGACATTAGCTTTCCTT+TGG | + | Chr4:3146799-3146818 | MsG0480018304.01.T01:CDS | 40.0% |
AAGCCAAACTTGGCCTCATT+CGG | - | Chr4:3147018-3147037 | None:intergenic | 45.0% | |
AGTTCTCGCAATCCATCAAC+TGG | - | Chr4:3146674-3146693 | None:intergenic | 45.0% | |
ATGCCAGAACTGTAGATCAC+TGG | + | Chr4:3146934-3146953 | MsG0480018304.01.T01:CDS | 45.0% | |
CACTTCAATGGTGAACTAGG+AGG | + | Chr4:3146578-3146597 | MsG0480018304.01.T01:CDS | 45.0% | |
CGCAGAAGCAATTCCAACTT+GGG | - | Chr4:3146993-3147012 | None:intergenic | 45.0% | |
CTTCCAGTGATCTACAGTTC+TGG | - | Chr4:3146940-3146959 | None:intergenic | 45.0% | |
GACACCCCTACCTATTAACT+TGG | + | Chr4:3147084-3147103 | MsG0480018304.01.T01:CDS | 45.0% | |
GGAAGATTCCAACTCCATGT+TGG | + | Chr4:3147498-3147517 | MsG0480018304.01.T01:CDS | 45.0% | |
GTATATCGGAGTAGAAGGTG+AGG | + | Chr4:3147477-3147496 | MsG0480018304.01.T01:CDS | 45.0% | |
GTGCACTGGGCTAATGTTAT+TGG | + | Chr4:3147828-3147847 | MsG0480018304.01.T01:CDS | 45.0% | |
TCGCAGAAGCAATTCCAACT+TGG | - | Chr4:3146994-3147013 | None:intergenic | 45.0% | |
TCTTGGCCAAGGACATGATT+TGG | + | Chr4:3146415-3146434 | MsG0480018304.01.T01:CDS | 45.0% | |
! | AGCAATTGCAGTTTGGTGGA+TGG | + | Chr4:3147934-3147953 | MsG0480018304.01.T01:CDS | 45.0% |
!! | AATGCTTGTGAGGGTATCTC+TGG | + | Chr4:3147637-3147656 | MsG0480018304.01.T01:CDS | 45.0% |
!! | GTTGATGGATTGCGAGAACT+CGG | + | Chr4:3146674-3146693 | MsG0480018304.01.T01:CDS | 45.0% |
ATCTCGAGAGTAGCCAAGGA+AGG | - | Chr4:3146529-3146548 | None:intergenic | 50.0% | |
GATCCGAATGAGGCCAAGTT+TGG | + | Chr4:3147012-3147031 | MsG0480018304.01.T01:CDS | 50.0% | |
TTAGCTGGCAACAACCGCTA+AGG | - | Chr4:3147390-3147409 | None:intergenic | 50.0% | |
TTGCTTCTGCGATCCGAATG+AGG | + | Chr4:3147002-3147021 | MsG0480018304.01.T01:CDS | 50.0% | |
TTTGCGCAGATTCTCGAGCA+TGG | - | Chr4:3146864-3146883 | None:intergenic | 50.0% | |
!! | ATAGGTAGGGGTGTCAAACC+AGG | - | Chr4:3147079-3147098 | None:intergenic | 50.0% |
CTCTCTTCGCGATAGCCATC+TGG | + | Chr4:3146742-3146761 | MsG0480018304.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 3146365 | 3148038 | 3146365 | ID=MsG0480018304.01;Name=MsG0480018304.01 |
Chr4 | mRNA | 3146365 | 3148038 | 3146365 | ID=MsG0480018304.01.T01;Parent=MsG0480018304.01;Name=MsG0480018304.01.T01;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|557 |
Chr4 | exon | 3146365 | 3148038 | 3146365 | ID=MsG0480018304.01.T01:exon:902;Parent=MsG0480018304.01.T01 |
Chr4 | CDS | 3146365 | 3148038 | 3146365 | ID=MsG0480018304.01.T01:cds;Parent=MsG0480018304.01.T01 |
Gene Sequence |
Protein sequence |