AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018642.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018642.01.T01 MTR_4g015850 89.814 805 18 4 3 744 535 1338 0.0 1412
MsG0480018642.01.T01 MTR_3g111090 40.909 770 354 20 38 728 584 1331 6.43e-147 463
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018642.01.T01 AT5G01400 54.370 778 245 14 9 721 522 1254 0.0 750
MsG0480018642.01.T01 AT5G01400 54.140 785 243 14 9 721 516 1255 0.0 749
MsG0480018642.01.T01 AT5G01400 54.370 778 245 14 9 721 356 1088 0.0 749
MsG0480018642.01.T01 AT1G27595 44.279 603 265 9 167 705 705 1300 1.46e-146 462

Find 185 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATCTTTAAAACTGATTT+TGG 0.141530 4:+7969843 None:intergenic
TTGTTTGAAAATTGCTTTAC+AGG 0.190241 4:-7969688 MsG0480018642.01.T01:intron
CATGTCAAATTCTTCAATTC+TGG 0.199692 4:+7964689 None:intergenic
ACATCTGGAGCAACTGCTTT+TGG 0.221067 4:+7971953 None:intergenic
TCCTTTATCATCAATTTCTA+AGG 0.253627 4:-7969379 MsG0480018642.01.T01:CDS
TTCAGTAGGAATGGCAATAT+TGG 0.263470 4:+7967821 None:intergenic
TATGGAGTTTGATTCTTCTA+AGG 0.266722 4:-7969728 MsG0480018642.01.T01:CDS
AGGTCTGTGCTGGTTGTTCT+TGG 0.275396 4:-7964924 MsG0480018642.01.T01:CDS
GATAGTAGTGTTATCCATTC+TGG 0.281372 4:-7972292 MsG0480018642.01.T01:CDS
ATCCCTGGCCTGGATTCTTT+TGG 0.284764 4:-7972136 MsG0480018642.01.T01:CDS
CGTGTCCTCTACAGGTTATT+TGG 0.285607 4:-7970106 MsG0480018642.01.T01:CDS
ACCCAATGTACGCACTAGTA+TGG 0.287896 4:+7968227 None:intergenic
TCCTTAGAAATTGATGATAA+AGG 0.306957 4:+7969378 None:intergenic
GGAGATTCTCACTTCCATTT+GGG 0.314678 4:+7968169 None:intergenic
TGATGGTACGATCCCTTCTA+AGG 0.319404 4:-7967982 MsG0480018642.01.T01:CDS
AAAGGTATTGTGTTATTTCC+TGG 0.322465 4:-7968979 MsG0480018642.01.T01:intron
GCTTGCTGTAGACGATTCTT+TGG 0.334023 4:+7964803 None:intergenic
AACATGTGCTCTCCTGGAAA+TGG 0.336809 4:-7969816 MsG0480018642.01.T01:CDS
GATTTATCTGCCGACATTGA+TGG 0.337348 4:+7971989 None:intergenic
GCAACTATTAAATCCTTAGA+AGG 0.341848 4:+7967969 None:intergenic
AAGCTACAAGTTTAGATAAT+AGG 0.343173 4:-7972030 MsG0480018642.01.T01:CDS
AGAATCATGCTGTCTTAAAT+TGG 0.343462 4:-7964552 MsG0480018642.01.T01:three_prime_UTR
GTTACATGATTCAAAACTTA+AGG 0.346849 4:-7967937 MsG0480018642.01.T01:intron
GACGAAGAAATTTCTTCAAC+TGG 0.354604 4:-7972319 MsG0480018642.01.T01:CDS
GGAGGCAGGTTAACAATGTT+TGG 0.360733 4:+7967621 None:intergenic
GGAAGTGAAGATTGTATATC+TGG 0.363094 4:+7965138 None:intergenic
ATTTGTCATGCAGTTTCCTT+TGG 0.366740 4:-7970935 MsG0480018642.01.T01:intron
AGATCTCCTTGAAATTATAT+CGG 0.367471 4:-7968196 MsG0480018642.01.T01:CDS
AGGAGATTCTCACTTCCATT+TGG 0.369288 4:+7968168 None:intergenic
AGAATCCCACCCACAACTTT+GGG 0.370721 4:+7966167 None:intergenic
TCGTTACAAAGTCTAAAATA+AGG 0.374046 4:+7964346 None:intergenic
AAGAATCCCACCCACAACTT+TGG 0.374602 4:+7966166 None:intergenic
AACTTTGGCTGCTCCCTCAT+TGG 0.375615 4:-7972092 MsG0480018642.01.T01:CDS
AGCTTTAACATTATGTATCT+AGG 0.383150 4:-7964438 MsG0480018642.01.T01:three_prime_UTR
TTGACAAAACCTCAATCATT+TGG 0.389140 4:-7966130 MsG0480018642.01.T01:CDS
ACATGTGCTCTCCTGGAAAT+GGG 0.397759 4:-7969815 MsG0480018642.01.T01:CDS
TACCAATTGATTCAAAACTT+TGG 0.405058 4:+7966769 None:intergenic
TTCAAACAAGTTTCTCGAAT+GGG 0.406468 4:+7969702 None:intergenic
TCAGCTACCTCCACCACAAC+TGG 0.410140 4:-7965220 MsG0480018642.01.T01:intron
ACAACTGGAGCAATCATCTT+TGG 0.410210 4:+7971872 None:intergenic
TGGCATTGTTTCCGATTCTC+AGG 0.410587 4:-7964904 MsG0480018642.01.T01:CDS
TTAGAGAACATGTGCTCTCC+TGG 0.411828 4:-7969822 MsG0480018642.01.T01:CDS
CTAAGGATGTCTCAGATAAT+CGG 0.416069 4:-7969085 MsG0480018642.01.T01:CDS
AATAAATACAGACCACTGTT+AGG 0.420689 4:+7970017 None:intergenic
GTCTGTGTTTGACTAGTTTG+TGG 0.421786 4:+7964870 None:intergenic
TCTACAGGTGGACTTTATCA+TGG 0.424221 4:-7966309 MsG0480018642.01.T01:intron
GTCTTTGAGTGGCAGTACTA+AGG 0.435101 4:-7969102 MsG0480018642.01.T01:CDS
GCTTAGTCTCAGTAAGGTTT+AGG 0.436139 4:+7964747 None:intergenic
TAAAACGGTAAACCTGCATT+AGG 0.438851 4:+7968148 None:intergenic
TGACTAGTTTGTGGCTGACT+TGG 0.442034 4:+7964879 None:intergenic
ATTTAATAGTTGCCGTGAAA+AGG 0.443698 4:-7967959 MsG0480018642.01.T01:CDS
TCAGGAATCTGATGTTGAAA+AGG 0.448896 4:-7969141 MsG0480018642.01.T01:intron
AAGAATTTGACATGTTCAAA+TGG 0.450890 4:-7964680 MsG0480018642.01.T01:three_prime_UTR
CTCAAGGTCTAAGTGCTGTA+TGG 0.454566 4:-7969746 MsG0480018642.01.T01:CDS
TGACATTGCGTGTCCTCTAC+AGG 0.456807 4:-7970114 MsG0480018642.01.T01:CDS
TGGAGCAGAGTGTTACTGTT+AGG 0.458196 4:-7964509 MsG0480018642.01.T01:three_prime_UTR
TGATGCATTGTCAGAAACTT+TGG 0.460330 4:-7972107 MsG0480018642.01.T01:CDS
ACTTGTAGCTTGCTCTTGAC+TGG 0.460721 4:+7972042 None:intergenic
TCGCAACATTGGTTTGCTGC+TGG 0.461216 4:-7964529 MsG0480018642.01.T01:three_prime_UTR
CCCATACTAGTGCGTACATT+GGG 0.461762 4:-7968228 MsG0480018642.01.T01:CDS
CGACCAAAAGAATCCAGGCC+AGG 0.464968 4:+7972133 None:intergenic
AATGCCCATATTATTACAAA+AGG 0.464983 4:+7964383 None:intergenic
TTCTGTTACTGAGGCTCAGA+GGG 0.470662 4:-7969030 MsG0480018642.01.T01:CDS
CTGTACGCATGAACAGTAAA+GGG 0.474320 4:+7966644 None:intergenic
TTTAATGCAGCTTCCAGTTG+TGG 0.475725 4:+7965207 None:intergenic
CTACAGGTGGACTTTATCAT+GGG 0.478973 4:-7966308 MsG0480018642.01.T01:intron
CGTACAGTATTACAAGCAAT+AGG 0.481811 4:-7966628 MsG0480018642.01.T01:CDS
GGGGATCCGATATAATTTCA+AGG 0.482625 4:+7968190 None:intergenic
CTTGGAACTTCTCCGGAGGC+AGG 0.485832 4:+7967607 None:intergenic
TGCTCGTCTTGTAAAGAAGC+AGG 0.490804 4:-7966279 MsG0480018642.01.T01:intron
GACACCAAGCTATTGACATC+TGG 0.494068 4:+7971938 None:intergenic
AGTGAGCTTCTTACCAGTGT+TGG 0.498051 4:+7966598 None:intergenic
AAATGGGGATAAAATTGAAA+AGG 0.498144 4:-7969799 MsG0480018642.01.T01:CDS
TTACTTAATGATTTATCCGA+TGG 0.498507 4:+7969891 None:intergenic
AGCAAAACGCCAAATGATTG+AGG 0.498847 4:+7966121 None:intergenic
TCTTAAATTGGTCGCAACAT+TGG 0.502424 4:-7964540 MsG0480018642.01.T01:three_prime_UTR
GAAGCAGCTTAGTCTCAGTA+AGG 0.506253 4:+7964741 None:intergenic
TTTCAAACAAGTTTCTCGAA+TGG 0.510409 4:+7969701 None:intergenic
TGGAATGATGTATATTAGAA+TGG 0.510603 4:-7964582 MsG0480018642.01.T01:three_prime_UTR
TGAGACAAGCAACTCTGATA+AGG 0.510862 4:-7964844 MsG0480018642.01.T01:CDS
TATAAGCAAATATCTGTAGC+TGG 0.511172 4:-7971785 MsG0480018642.01.T01:CDS
GCAGCTTCCAGTTGTGGTGG+AGG 0.513341 4:+7965213 None:intergenic
GGTATACAAGTATCAGAAGA+TGG 0.513523 4:+7972226 None:intergenic
AGCACTTGGTCGCATACTGC+AGG 0.514423 4:-7967583 MsG0480018642.01.T01:intron
CTTAATGATTTATCCGATGG+TGG 0.515657 4:+7969894 None:intergenic
TTGCCTACATCATCTATGTC+AGG 0.515758 4:+7972172 None:intergenic
CTTAAGAAAGACATCCACTA+GGG 0.522810 4:+7964463 None:intergenic
GTATGCGACCAAGTGCTCCT+TGG 0.523221 4:+7967589 None:intergenic
ACTGTACGCATGAACAGTAA+AGG 0.524136 4:+7966643 None:intergenic
ATGAAAGAATCATGCCAGAA+TGG 0.526147 4:+7972278 None:intergenic
GTCCATTGCTGATTCACAAA+AGG 0.526822 4:-7969280 MsG0480018642.01.T01:intron
GTTATTTGGTGAAGCTGAAG+TGG 0.526956 4:-7970092 MsG0480018642.01.T01:CDS
TCAGAAGATGGAAAATCAGT+AGG 0.527211 4:+7972238 None:intergenic
ACCTCATCTTTCAGTAGGAA+TGG 0.527390 4:+7967812 None:intergenic
CATATCAGTGGAAGCCAATG+AGG 0.527439 4:+7972078 None:intergenic
TGATCTTGCAGATGAACAAA+GGG 0.528115 4:-7971849 MsG0480018642.01.T01:CDS
CTGACTTGGAACCTGAGAAT+CGG 0.528139 4:+7964893 None:intergenic
TCATCTGCAAGATCAACAAC+TGG 0.528827 4:+7971857 None:intergenic
AAACATTGTTAACCTGCCTC+CGG 0.529211 4:-7967619 MsG0480018642.01.T01:CDS
AGTGCTCCTTGGAACTTCTC+CGG 0.530060 4:+7967600 None:intergenic
GTGAAGATTGTATATCTGGC+TGG 0.530944 4:+7965142 None:intergenic
CCCAATGTACGCACTAGTAT+GGG 0.531811 4:+7968228 None:intergenic
CAGAAGATGGAAAATCAGTA+GGG 0.532555 4:+7972239 None:intergenic
GTTGTGGAAGAAAAGAAGTC+AGG 0.532627 4:+7970067 None:intergenic
ATATACAATCTTCACTTCCC+AGG 0.534428 4:-7965134 MsG0480018642.01.T01:intron
TGCTCCAGATGTCAATAGCT+TGG 0.536340 4:-7971942 MsG0480018642.01.T01:CDS
AACTTAGAGAGTGGAATCCC+TGG 0.536617 4:-7972151 MsG0480018642.01.T01:CDS
GAGAAGTTCCAAGGAGCACT+TGG 0.538012 4:-7967597 MsG0480018642.01.T01:CDS
GTAACGATATAAATAATGAA+TGG 0.538161 4:-7964330 MsG0480018642.01.T01:three_prime_UTR
AGAGAGTGGAATCCCTGGCC+TGG 0.539326 4:-7972146 MsG0480018642.01.T01:CDS
AAATAGAATTGCTGCACTGA+AGG 0.540097 4:-7965187 MsG0480018642.01.T01:CDS
TGAGCCTCAGTAACAGAAAG+TGG 0.540347 4:+7969035 None:intergenic
CAAATATTGTAGAAATCTCA+AGG 0.541326 4:-7972342 MsG0480018642.01.T01:CDS
GTGCTGACATTCTCCACTCC+AGG 0.543375 4:+7972205 None:intergenic
TATGGAAATACCCAAAGTTG+TGG 0.546694 4:-7966177 MsG0480018642.01.T01:CDS
TCCCATACTAGTGCGTACAT+TGG 0.549688 4:-7968229 MsG0480018642.01.T01:CDS
GAAGTACCTCATCTTTCAGT+AGG 0.550001 4:+7967807 None:intergenic
CCTAGCTTGTACATATATGT+AGG 0.550529 4:-7964605 MsG0480018642.01.T01:three_prime_UTR
ATATACAGAAGCTGCAGTTG+TGG 0.551660 4:+7970051 None:intergenic
ATGGAAATACCCAAAGTTGT+GGG 0.553039 4:-7966176 MsG0480018642.01.T01:CDS
CCTCCTGACATAGATGATGT+AGG 0.554678 4:-7972175 MsG0480018642.01.T01:CDS
CCTACATATATGTACAAGCT+AGG 0.557028 4:+7964605 None:intergenic
TCTTCTGATACTTGTATACC+TGG 0.557297 4:-7972223 MsG0480018642.01.T01:CDS
AAATCATTAAGTAAACTGCT+TGG 0.557391 4:-7969882 MsG0480018642.01.T01:CDS
GACCAAAAGAATCCAGGCCA+GGG 0.559177 4:+7972134 None:intergenic
TTGATCTTGCAGATGAACAA+AGG 0.564447 4:-7971850 MsG0480018642.01.T01:CDS
CTCGCCACTTTCTGTTACTG+AGG 0.565821 4:-7969039 MsG0480018642.01.T01:CDS
AATAGTGGTCAATGTGTCAA+AGG 0.567821 4:-7964654 MsG0480018642.01.T01:three_prime_UTR
GATATAAATAATGAATGGAA+TGG 0.567976 4:-7964325 MsG0480018642.01.T01:three_prime_UTR
CATTTCGACCAAAAGAATCC+AGG 0.573060 4:+7972128 None:intergenic
ATGTTCAAATGGCTGAATAG+TGG 0.573787 4:-7964669 MsG0480018642.01.T01:three_prime_UTR
GAGATTCTCACTTCCATTTG+GGG 0.577359 4:+7968170 None:intergenic
AAGTGAGAATCTCCTAATGC+AGG 0.578499 4:-7968160 MsG0480018642.01.T01:intron
AATGCAGCTTCCAGTTGTGG+TGG 0.579561 4:+7965210 None:intergenic
TTTCTGTTACTGAGGCTCAG+AGG 0.580623 4:-7969031 MsG0480018642.01.T01:CDS
CGGCAATCAAGCACATCTGA+GGG 0.581858 4:-7969065 MsG0480018642.01.T01:CDS
AATGAACCGTTGTCTTTGAG+TGG 0.583464 4:-7969113 MsG0480018642.01.T01:CDS
AAACAAGTTTCTCGAATGGG+AGG 0.585179 4:+7969705 None:intergenic
TCGGCAATCAAGCACATCTG+AGG 0.587282 4:-7969066 MsG0480018642.01.T01:CDS
CATTGATGGAACTAAGTTCG+AGG 0.587511 4:+7972003 None:intergenic
CAAACTAGTCAAACACAGAC+AGG 0.588435 4:-7964867 MsG0480018642.01.T01:CDS
ATCTTCTATTTGCATATCAG+TGG 0.588586 4:+7972066 None:intergenic
ACTTGCTTATTTAGGAGTCG+AGG 0.590486 4:-7971738 MsG0480018642.01.T01:intron
TTCCACGGGTCTAATTCCAA+AGG 0.590908 4:+7970919 None:intergenic
CGCATGAACAGTAAAGGGAG+AGG 0.593098 4:+7966649 None:intergenic
CATGTGCTCTCCTGGAAATG+GGG 0.594466 4:-7969814 MsG0480018642.01.T01:CDS
TGGCTAGCATGAGCAATCAA+TGG 0.595388 4:+7965162 None:intergenic
TACAGGTGGACTTTATCATG+GGG 0.595610 4:-7966307 MsG0480018642.01.T01:intron
GGAATCACACACATTGAATG+TGG 0.599164 4:-7969778 MsG0480018642.01.T01:CDS
TGATACTTGTATACCTGGAG+TGG 0.599963 4:-7972218 MsG0480018642.01.T01:CDS
ACTTAAGAAAGACATCCACT+AGG 0.602634 4:+7964462 None:intergenic
GATGTAGGCAACTTAGAGAG+TGG 0.606086 4:-7972160 MsG0480018642.01.T01:CDS
GATTGACTACTCAGGTCATG+AGG 0.606144 4:-7970875 MsG0480018642.01.T01:intron
AAATACAGACCACTGTTAGG+AGG 0.606214 4:+7970020 None:intergenic
CACAACTGAAGTAGCTGTTG+AGG 0.610027 4:+7971916 None:intergenic
CTGCCTCCGGAGAAGTTCCA+AGG 0.611126 4:-7967606 MsG0480018642.01.T01:CDS
AGATTCTCACTTCCATTTGG+GGG 0.612127 4:+7968171 None:intergenic
GAAATACCCAAAGTTGTGGG+TGG 0.613249 4:-7966173 MsG0480018642.01.T01:CDS
CAACTATTAAATCCTTAGAA+GGG 0.615525 4:+7967970 None:intergenic
TCTGAAGCTACTGATGCTGA+AGG 0.615590 4:-7969303 MsG0480018642.01.T01:CDS
TTTGGCAATACTAGACGAGA+AGG 0.622414 4:+7971890 None:intergenic
GATGGAAAATCAGTAGGGGA+TGG 0.622744 4:+7972244 None:intergenic
AATCCTTTAATAGGTAATGG+CGG 0.626521 4:-7967649 MsG0480018642.01.T01:intron
TTCCTTTGGAATTAGACCCG+TGG 0.631324 4:-7970921 MsG0480018642.01.T01:CDS
CTGAAGCTACTGATGCTGAA+GGG 0.633224 4:-7969302 MsG0480018642.01.T01:CDS
GAACTTAGTTCCATCAATGT+CGG 0.635928 4:-7971999 MsG0480018642.01.T01:CDS
CTTCACCAAATAACCTGTAG+AGG 0.637367 4:+7970101 None:intergenic
AAATACCCAAAGTTGTGGGT+GGG 0.637639 4:-7966172 MsG0480018642.01.T01:CDS
GTGTTGCATACACTTACTGA+TGG 0.643430 4:-7967999 MsG0480018642.01.T01:CDS
ATGATATATTGATCCCCTAG+TGG 0.644899 4:-7964477 MsG0480018642.01.T01:three_prime_UTR
ATTGATGGAACTAAGTTCGA+GGG 0.649322 4:+7972004 None:intergenic
AGCTTGTACATATATGTAGG+TGG 0.652487 4:-7964602 MsG0480018642.01.T01:three_prime_UTR
GCCATTCCTACTGAAAGATG+AGG 0.654208 4:-7967813 MsG0480018642.01.T01:intron
ATATCAGTGGAAGCCAATGA+GGG 0.658434 4:+7972079 None:intergenic
GCTCCTTGGAACTTCTCCGG+AGG 0.663080 4:+7967603 None:intergenic
AAATATTGTAGAAATCTCAA+GGG 0.663589 4:-7972341 MsG0480018642.01.T01:CDS
AATGTGGATAGAGTTACTCA+AGG 0.667804 4:-7969762 MsG0480018642.01.T01:CDS
AAGCAAATATCTGTAGCTGG+AGG 0.671702 4:-7971782 MsG0480018642.01.T01:CDS
CTCAGTAACAGAAAGTGGCG+AGG 0.678088 4:+7969040 None:intergenic
CCTACATCATCTATGTCAGG+AGG 0.689034 4:+7972175 None:intergenic
AGAAGATGGAAAATCAGTAG+GGG 0.689513 4:+7972240 None:intergenic
TGAAACATTCCTCCTAACAG+TGG 0.692853 4:-7970029 MsG0480018642.01.T01:intron
TCTGTTACTGAGGCTCAGAG+GGG 0.707312 4:-7969029 MsG0480018642.01.T01:CDS
TTAAGAAAGACATCCACTAG+GGG 0.709941 4:+7964464 None:intergenic
GTACTGCCACTCAAAGACAA+CGG 0.724883 4:+7969107 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAACATATAACA+AGG + Chr4:7970239-7970258 None:intergenic 10.0%
!! AAAATGGAATAAATATAAAA+GGG + Chr4:7971560-7971579 None:intergenic 10.0%
!! ATCATGATATATAATATATA+TGG - Chr4:7967832-7967851 MsG0480018642.01.T01:CDS 10.0%
!! ATTTAAAAAAACAAAACATA+AGG + Chr4:7971248-7971267 None:intergenic 10.0%
!! TAAAATGGAATAAATATAAA+AGG + Chr4:7971561-7971580 None:intergenic 10.0%
!! TGTATAAACAAATTAAAAAA+AGG - Chr4:7971049-7971068 MsG0480018642.01.T01:intron 10.0%
!! TTAATAAAAGAAAAGATATT+CGG + Chr4:7965416-7965435 None:intergenic 10.0%
!! TTTCAATGAAAAATTATAAA+AGG + Chr4:7967075-7967094 None:intergenic 10.0%
!!! ACTTTTAATTTGATTATAAA+AGG - Chr4:7967803-7967822 MsG0480018642.01.T01:intron 10.0%
!!! TATTATTAAGTATTTGTTTT+TGG - Chr4:7968316-7968335 MsG0480018642.01.T01:intron 10.0%
!!! TTATATTTATTCCATTTTAA+AGG - Chr4:7971562-7971581 MsG0480018642.01.T01:intron 10.0%
!!! TTATTTTATAATATCTTGAT+TGG + Chr4:7968100-7968119 None:intergenic 10.0%
!!! TTTGTTTTTTTAAATTTCTT+GGG - Chr4:7971253-7971272 MsG0480018642.01.T01:intron 10.0%
!!! TTTTGTTTTTTTAAATTTCT+TGG - Chr4:7971252-7971271 MsG0480018642.01.T01:intron 10.0%
!! AAATGGAATAAATATAAAAG+GGG + Chr4:7971559-7971578 None:intergenic 15.0%
!! AAATTAAAAAAAGGTAATTC+AGG - Chr4:7971058-7971077 MsG0480018642.01.T01:intron 15.0%
!! GAATTGCTTTATATAATTAT+TGG - Chr4:7969883-7969902 MsG0480018642.01.T01:CDS 15.0%
!! TCAAGATATATAAGAAAATA+TGG - Chr4:7968040-7968059 MsG0480018642.01.T01:intron 15.0%
!!! AAAAATAATGTTTGAAGTAA+TGG + Chr4:7965487-7965506 None:intergenic 15.0%
!!! AAAATCTTTAAAACTGATTT+TGG + Chr4:7966779-7966798 None:intergenic 15.0%
!!! ATAAATGTATCTAAAATAGA+AGG + Chr4:7965101-7965120 None:intergenic 15.0%
!!! ATTTAAAATTTGTTTTGGTT+TGG - Chr4:7971610-7971629 MsG0480018642.01.T01:intron 15.0%
!!! TAAATGTATCTAAAATAGAA+GGG + Chr4:7965100-7965119 None:intergenic 15.0%
!!! TAATTGTTTTTCCTTAAAAT+TGG - Chr4:7965986-7966005 MsG0480018642.01.T01:intron 15.0%
!!! TATTATCATTTTTAACTGTT+TGG - Chr4:7970547-7970566 MsG0480018642.01.T01:intron 15.0%
!!! TGAATATTTGTATATTCTTT+TGG - Chr4:7970910-7970929 MsG0480018642.01.T01:CDS 15.0%
!!! TTTAAAATTTGTTTTGGTTT+GGG - Chr4:7971611-7971630 MsG0480018642.01.T01:intron 15.0%
!!! TTTTAAGGAAAAACAATTAA+AGG + Chr4:7965985-7966004 None:intergenic 15.0%
!! AAATATACTGTTAAATGACT+TGG - Chr4:7970811-7970830 MsG0480018642.01.T01:intron 20.0%
!! AAATATTGTAGAAATCTCAA+GGG - Chr4:7964278-7964297 MsG0480018642.01.T01:three_prime_UTR 20.0%
!! AAGCTAATAGAAAGAAAAAT+TGG + Chr4:7965806-7965825 None:intergenic 20.0%
!! AATAAAATCAGAATCGATAT+TGG + Chr4:7971667-7971686 None:intergenic 20.0%
!! AATAACTAAAAATGTGTTCA+TGG + Chr4:7969560-7969579 None:intergenic 20.0%
!! AATATACTGTTAAATGACTT+GGG - Chr4:7970812-7970831 MsG0480018642.01.T01:intron 20.0%
!! AATTGCAAATTTCTTATACA+GGG - Chr4:7969585-7969604 MsG0480018642.01.T01:intron 20.0%
!! ACACAGATGTTTAATATAAA+AGG + Chr4:7966968-7966987 None:intergenic 20.0%
!! AGAACCTGTTTAAATTTATT+TGG - Chr4:7966237-7966256 MsG0480018642.01.T01:intron 20.0%
!! AGTAAAATTTCATCAAATTG+TGG - Chr4:7965308-7965327 MsG0480018642.01.T01:intron 20.0%
!! ATAAAAATGTAAAATAGGAC+AGG + Chr4:7965203-7965222 None:intergenic 20.0%
!! ATATGATGTGAATTATATGT+TGG - Chr4:7967741-7967760 MsG0480018642.01.T01:intron 20.0%
!! ATTTGCAAAAAAAATTGACT+TGG - Chr4:7970280-7970299 MsG0480018642.01.T01:intron 20.0%
!! CGAAAAATTATAAGGTAAAA+CGG + Chr4:7968489-7968508 None:intergenic 20.0%
!! CTGACTTATGTATAATATAA+AGG - Chr4:7971009-7971028 MsG0480018642.01.T01:intron 20.0%
!! GATATAAATAATGAATGGAA+TGG - Chr4:7972294-7972313 MsG0480018642.01.T01:CDS 20.0%
!! GATTCTCACAAAAAATTATA+TGG + Chr4:7968553-7968572 None:intergenic 20.0%
!! GCTTTATATAATTATTGGAA+AGG - Chr4:7969888-7969907 MsG0480018642.01.T01:CDS 20.0%
!! GTAACGATATAAATAATGAA+TGG - Chr4:7972289-7972308 MsG0480018642.01.T01:CDS 20.0%
!! GTCTGATAAAAATGTAAAAT+AGG + Chr4:7965208-7965227 None:intergenic 20.0%
!! TAAAAAACTCTTCATACATA+AGG - Chr4:7968010-7968029 MsG0480018642.01.T01:intron 20.0%
!! TAATTGCAAATTTCTTATAC+AGG - Chr4:7969584-7969603 MsG0480018642.01.T01:intron 20.0%
!! TACAAAATAAGTATATGTGA+AGG + Chr4:7970651-7970670 None:intergenic 20.0%
!! TATGATGTGAATTATATGTT+GGG - Chr4:7967742-7967761 MsG0480018642.01.T01:intron 20.0%
!! TCCAAATGAAAAGAAAAAAT+AGG + Chr4:7968837-7968856 None:intergenic 20.0%
!! TGTTTAAATAAACTGTAAGT+TGG - Chr4:7966403-7966422 MsG0480018642.01.T01:intron 20.0%
!! TTAATAGCGTATTAGAATTT+AGG + Chr4:7967976-7967995 None:intergenic 20.0%
!!! AAAACTGATTTTGGTAAATA+AGG + Chr4:7966770-7966789 None:intergenic 20.0%
!!! ATATAAAACTTGCTTTTGTT+AGG - Chr4:7969448-7969467 MsG0480018642.01.T01:intron 20.0%
!!! ATTAAGGCTTAGTTTTTTTA+GGG - Chr4:7965342-7965361 MsG0480018642.01.T01:intron 20.0%
!!! ATTTTTCTTTCTATTAGCTT+TGG - Chr4:7965806-7965825 MsG0480018642.01.T01:intron 20.0%
!!! GAAATATCTTGTTTTTCATT+TGG - Chr4:7968931-7968950 MsG0480018642.01.T01:intron 20.0%
!!! GAGTATTGATATTTTTACAT+TGG - Chr4:7968588-7968607 MsG0480018642.01.T01:intron 20.0%
!!! GTAGATTTTTTTGGAAAATA+AGG + Chr4:7970209-7970228 None:intergenic 20.0%
!!! GTTTTTAACAATCCTTTAAT+AGG - Chr4:7968961-7968980 MsG0480018642.01.T01:intron 20.0%
!!! TATTTATTCCATTTTAAAGG+TGG - Chr4:7971565-7971584 MsG0480018642.01.T01:intron 20.0%
!!! TCATCCTTTTGTAATAATAT+GGG - Chr4:7972232-7972251 MsG0480018642.01.T01:CDS 20.0%
!!! TCCTATTTTTTCTTTTCATT+TGG - Chr4:7968833-7968852 MsG0480018642.01.T01:intron 20.0%
!!! TCTGATTTTATTTTTTTTCC+AGG - Chr4:7971675-7971694 MsG0480018642.01.T01:intron 20.0%
!!! TCTGCATTTAAAATTTGTTT+TGG - Chr4:7971605-7971624 MsG0480018642.01.T01:intron 20.0%
! AAAAACACATGTCTTACTTT+CGG - Chr4:7967188-7967207 MsG0480018642.01.T01:intron 25.0%
! AAAATAAGTATATGTGAAGG+TGG + Chr4:7970648-7970667 None:intergenic 25.0%
! AAACTTCTCAAGATATACAA+AGG - Chr4:7969206-7969225 MsG0480018642.01.T01:intron 25.0%
! AAAGTGAAAAAAGTCTTTGT+AGG + Chr4:7969113-7969132 None:intergenic 25.0%
! AAATCATTAAGTAAACTGCT+TGG - Chr4:7966737-7966756 MsG0480018642.01.T01:intron 25.0%
! AAATGGGGATAAAATTGAAA+AGG - Chr4:7966820-7966839 MsG0480018642.01.T01:CDS 25.0%
! AACAAGACTCAATTATAACA+AGG + Chr4:7966135-7966154 None:intergenic 25.0%
! AACAATCCTTTAATAGGTAA+TGG - Chr4:7968967-7968986 MsG0480018642.01.T01:intron 25.0%
! AACATTCGCGAAAAATTATA+AGG + Chr4:7968497-7968516 None:intergenic 25.0%
! AAGAATTTGACATGTTCAAA+TGG - Chr4:7971939-7971958 MsG0480018642.01.T01:CDS 25.0%
! AAGCTACAAGTTTAGATAAT+AGG - Chr4:7964589-7964608 MsG0480018642.01.T01:three_prime_UTR 25.0%
! AATATCCAGTTGAGATTATA+GGG - Chr4:7967664-7967683 MsG0480018642.01.T01:intron 25.0%
! AATCAATTGGTATGTTATGT+GGG - Chr4:7969861-7969880 MsG0480018642.01.T01:CDS 25.0%
! AATGCCCATATTATTACAAA+AGG + Chr4:7972239-7972258 None:intergenic 25.0%
! ACAGAAATTTACTAATGCTA+AGG + Chr4:7967030-7967049 None:intergenic 25.0%
! ACGAATGAACTATTTATTGA+AGG - Chr4:7970673-7970692 MsG0480018642.01.T01:intron 25.0%
! AGATCTCCTTGAAATTATAT+CGG - Chr4:7968423-7968442 MsG0480018642.01.T01:intron 25.0%
! AGTCATTTATATTCTTCAAC+AGG + Chr4:7967164-7967183 None:intergenic 25.0%
! ATAAAAGAAAAGATATTCGG+AGG + Chr4:7965413-7965432 None:intergenic 25.0%
! ATTATGTTCTAATGTGTTTC+TGG - Chr4:7971360-7971379 MsG0480018642.01.T01:intron 25.0%
! CAAATATTGTAGAAATCTCA+AGG - Chr4:7964277-7964296 MsG0480018642.01.T01:three_prime_UTR 25.0%
! CAACTATTAAATCCTTAGAA+GGG + Chr4:7968652-7968671 None:intergenic 25.0%
! CAGAAATTTACTAATGCTAA+GGG + Chr4:7967029-7967048 None:intergenic 25.0%
! CATCACAAAACATCAATATA+AGG + Chr4:7968196-7968215 None:intergenic 25.0%
! CCAACCAAATAAATTTAAAC+AGG + Chr4:7966244-7966263 None:intergenic 25.0%
! CCTGTTTAAATTTATTTGGT+TGG - Chr4:7966241-7966260 MsG0480018642.01.T01:intron 25.0%
! GAAAGGAACAGTAAAATTAA+CGG + Chr4:7971537-7971556 None:intergenic 25.0%
! GAATAAATATAAAAGGGGAA+AGG + Chr4:7971554-7971573 None:intergenic 25.0%
! GATCTGAATTTGATGTAATT+AGG - Chr4:7965527-7965546 MsG0480018642.01.T01:intron 25.0%
! GTTACATGATTCAAAACTTA+AGG - Chr4:7968682-7968701 MsG0480018642.01.T01:intron 25.0%
! TAAAAGAAAAGATATTCGGA+GGG + Chr4:7965412-7965431 None:intergenic 25.0%
! TAAGGAAAAACAATTAAAGG+TGG + Chr4:7965982-7966001 None:intergenic 25.0%
! TAATATCCAGTTGAGATTAT+AGG - Chr4:7967663-7967682 MsG0480018642.01.T01:intron 25.0%
! TAGATACATTTATCTCTAGT+AGG - Chr4:7965108-7965127 MsG0480018642.01.T01:intron 25.0%
! TATGCAAAAACAGTATTTCA+CGG - Chr4:7969419-7969438 MsG0480018642.01.T01:intron 25.0%
! TCATATCTTAGACTAACTTT+GGG - Chr4:7967936-7967955 MsG0480018642.01.T01:intron 25.0%
! TCCTTTATCATCAATTTCTA+AGG - Chr4:7967240-7967259 MsG0480018642.01.T01:intron 25.0%
! TGGAATGATGTATATTAGAA+TGG - Chr4:7972037-7972056 MsG0480018642.01.T01:CDS 25.0%
! TGTTGAAGAATATAAATGAC+TGG - Chr4:7967163-7967182 MsG0480018642.01.T01:intron 25.0%
! TTACTGAGAACATCATATTA+TGG + Chr4:7970600-7970619 None:intergenic 25.0%
! TTACTTAATGATTTATCCGA+TGG + Chr4:7966731-7966750 None:intergenic 25.0%
! TTCAGGTATTAACATTTGTT+GGG - Chr4:7970520-7970539 MsG0480018642.01.T01:intron 25.0%
! TTCATTAACAACACAATGAT+TGG + Chr4:7966367-7966386 None:intergenic 25.0%
! TTGTTTGAAAATTGCTTTAC+AGG - Chr4:7966931-7966950 MsG0480018642.01.T01:intron 25.0%
!! AGCTTTAACATTATGTATCT+AGG - Chr4:7972181-7972200 MsG0480018642.01.T01:CDS 25.0%
!! CTCATCCTTTTGTAATAATA+TGG - Chr4:7972231-7972250 MsG0480018642.01.T01:CDS 25.0%
!! GAAGCATTAATTAACACATA+GGG + Chr4:7965780-7965799 None:intergenic 25.0%
!! GAAGTATTAATTGCTATTCA+TGG - Chr4:7969642-7969661 MsG0480018642.01.T01:intron 25.0%
!! TAAAACTTCCACCTTTAAAA+TGG + Chr4:7971576-7971595 None:intergenic 25.0%
!! TACCAATTGATTCAAAACTT+TGG + Chr4:7969853-7969872 None:intergenic 25.0%
!! TATCTAGTTCAACAAAAATG+TGG + Chr4:7967430-7967449 None:intergenic 25.0%
!! TCCTTAGAAATTGATGATAA+AGG + Chr4:7967244-7967263 None:intergenic 25.0%
!! TCGTTACAAAGTCTAAAATA+AGG + Chr4:7972276-7972295 None:intergenic 25.0%
!! TGAAGCATTAATTAACACAT+AGG + Chr4:7965781-7965800 None:intergenic 25.0%
!! TGTTCTCAGTAAGTTTTTAT+TGG - Chr4:7970608-7970627 MsG0480018642.01.T01:intron 25.0%
!! TTTTCACTACAAAACTTGAA+CGG + Chr4:7968722-7968741 None:intergenic 25.0%
!! TTTTCGATACTTGCTTATTT+AGG - Chr4:7964873-7964892 MsG0480018642.01.T01:CDS 25.0%
!!! AACAACTTAGCTTTAGAATA+AGG - Chr4:7969289-7969308 MsG0480018642.01.T01:CDS 25.0%
!!! AATTTTTTGTGAGAATCTCT+TGG - Chr4:7968556-7968575 MsG0480018642.01.T01:intron 25.0%
!!! AGACTTTTTTCACTTTTCAA+AGG - Chr4:7969117-7969136 MsG0480018642.01.T01:CDS 25.0%
!!! AGATAAATGCTTTTAACTAG+TGG - Chr4:7965626-7965645 MsG0480018642.01.T01:intron 25.0%
!!! ATTGAGTCTTGTTATTCTTA+TGG - Chr4:7966142-7966161 MsG0480018642.01.T01:CDS 25.0%
!!! ATTTGTATATTCTTTTGGAG+TGG - Chr4:7970915-7970934 MsG0480018642.01.T01:CDS 25.0%
!!! CATTAAGGCTTAGTTTTTTT+AGG - Chr4:7965341-7965360 MsG0480018642.01.T01:intron 25.0%
!!! CGTATTAGAATTTAGGATTT+TGG + Chr4:7967969-7967988 None:intergenic 25.0%
!!! GGAATGATAGTAGATTTTTT+TGG + Chr4:7970218-7970237 None:intergenic 25.0%
!!! GTTAAAAGCATTTATCTAGA+AGG + Chr4:7965623-7965642 None:intergenic 25.0%
!!! TATTCTAAAGCTAAGTTGTT+AGG + Chr4:7969289-7969308 None:intergenic 25.0%
!!! TTAAGGCTTAGTTTTTTTAG+GGG - Chr4:7965343-7965362 MsG0480018642.01.T01:intron 25.0%
!!! TTGAGTCTTGTTATTCTTAT+GGG - Chr4:7966143-7966162 MsG0480018642.01.T01:CDS 25.0%
!!! TTTGTATATTCTTTTGGAGT+GGG - Chr4:7970916-7970935 MsG0480018642.01.T01:CDS 25.0%
AAAAGAAAAGATATTCGGAG+GGG + Chr4:7965411-7965430 None:intergenic 30.0%
AATAAATACAGACCACTGTT+AGG + Chr4:7966605-7966624 None:intergenic 30.0%
AGAATCATGCTGTCTTAAAT+TGG - Chr4:7972067-7972086 MsG0480018642.01.T01:CDS 30.0%
ATACAACAGAATATACAGAG+TGG + Chr4:7965028-7965047 None:intergenic 30.0%
ATAGCAATTAATACTTCAGC+TGG + Chr4:7969639-7969658 None:intergenic 30.0%
ATATCCAGTTGAGATTATAG+GGG - Chr4:7967665-7967684 MsG0480018642.01.T01:intron 30.0%
ATCTTCTATTTGCATATCAG+TGG + Chr4:7964556-7964575 None:intergenic 30.0%
ATTTAATAGTTGCCGTGAAA+AGG - Chr4:7968660-7968679 MsG0480018642.01.T01:intron 30.0%
CATATCTTAGACTAACTTTG+GGG - Chr4:7967937-7967956 MsG0480018642.01.T01:intron 30.0%
CATGTCAAATTCTTCAATTC+TGG + Chr4:7971933-7971952 None:intergenic 30.0%
CTCATATCTTAGACTAACTT+TGG - Chr4:7967935-7967954 MsG0480018642.01.T01:intron 30.0%
CTTCAGGTATTAACATTTGT+TGG - Chr4:7970519-7970538 MsG0480018642.01.T01:intron 30.0%
GAATCAATTGGTATGTTATG+TGG - Chr4:7969860-7969879 MsG0480018642.01.T01:CDS 30.0%
GCAACTATTAAATCCTTAGA+AGG + Chr4:7968653-7968672 None:intergenic 30.0%
GGATTATTAACAAATGCAGA+TGG + Chr4:7966442-7966461 None:intergenic 30.0%
GGTTTATCTCGTTAATTGTA+TGG - Chr4:7968345-7968364 MsG0480018642.01.T01:intron 30.0%
TACAACAGAATATACAGAGT+GGG + Chr4:7965027-7965046 None:intergenic 30.0%
TATAAGCAAATATCTGTAGC+TGG - Chr4:7964834-7964853 MsG0480018642.01.T01:CDS 30.0%
TATGGAGTTTGATTCTTCTA+AGG - Chr4:7966891-7966910 MsG0480018642.01.T01:intron 30.0%
TCATTTGGTACAAAAACTTG+TGG - Chr4:7971174-7971193 MsG0480018642.01.T01:intron 30.0%
TCTAACTTATCAAGAATGTC+AGG - Chr4:7964911-7964930 MsG0480018642.01.T01:CDS 30.0%
TTCAAACAAGTTTCTCGAAT+GGG + Chr4:7966920-7966939 None:intergenic 30.0%
TTGACAAAACCTCAATCATT+TGG - Chr4:7970489-7970508 MsG0480018642.01.T01:intron 30.0%
TTGTGTGTGAAATAAAAGAG+TGG + Chr4:7965261-7965280 None:intergenic 30.0%
TTTCAAACAAGTTTCTCGAA+TGG + Chr4:7966921-7966940 None:intergenic 30.0%
TTTCACTACAAAACTTGAAC+GGG + Chr4:7968721-7968740 None:intergenic 30.0%
! AACTTGCTTTCATGATTTCT+GGG - Chr4:7971304-7971323 MsG0480018642.01.T01:intron 30.0%
! AAGGCTTCTGTCTTATTATT+TGG - Chr4:7969358-7969377 MsG0480018642.01.T01:CDS 30.0%
! AATCCTTTAATAGGTAATGG+CGG - Chr4:7968970-7968989 MsG0480018642.01.T01:intron 30.0%
! AGAACCAACTTTGAAAATGT+AGG - Chr4:7966056-7966075 MsG0480018642.01.T01:intron 30.0%
! AGAAGATTTTGCAAAGGAAA+TGG - Chr4:7967267-7967286 MsG0480018642.01.T01:intron 30.0%
! ATAAGTGCACTACCTTTTTA+AGG + Chr4:7969694-7969713 None:intergenic 30.0%
! ATCTGTGTTCCTTGAATTTT+AGG - Chr4:7966980-7966999 MsG0480018642.01.T01:intron 30.0%
! CAAAGTTAGTCTAAGATATG+AGG + Chr4:7967937-7967956 None:intergenic 30.0%
! CACTTTTCAAAGGTTAAGTA+GGG - Chr4:7969127-7969146 MsG0480018642.01.T01:CDS 30.0%
! CTTTTTCTCTTTTCCTTTTC+AGG - Chr4:7967460-7967479 MsG0480018642.01.T01:intron 30.0%
! GAATTGCTGTTAGATGAATA+TGG - Chr4:7970941-7970960 MsG0480018642.01.T01:intron 30.0%
! GATTGTAAGCTATGTAGTTT+TGG - Chr4:7969174-7969193 MsG0480018642.01.T01:intron 30.0%
! GATTTCTGAAAGTAAAAGAC+AGG + Chr4:7965173-7965192 None:intergenic 30.0%
! GGAAATAGAAGATTTTGCAA+AGG - Chr4:7967261-7967280 MsG0480018642.01.T01:intron 30.0%
! GTAGGTCTCTTTAGAAAAAT+AGG - Chr4:7966074-7966093 MsG0480018642.01.T01:intron 30.0%
! GTGGCGTTTGAAAAATATTT+TGG + Chr4:7965242-7965261 None:intergenic 30.0%
! GTGTTTACTCTCCAATTTTA+AGG + Chr4:7966000-7966019 None:intergenic 30.0%
! TAAGTGCACTACCTTTTTAA+GGG + Chr4:7969693-7969712 None:intergenic 30.0%
! TAGATTTTAAGCATAAAGCG+TGG + Chr4:7966214-7966233 None:intergenic 30.0%
! TGAATCATGTAACCTTTTCA+CGG + Chr4:7968675-7968694 None:intergenic 30.0%
! TTTTGCATACTACAGTACAT+TGG + Chr4:7969408-7969427 None:intergenic 30.0%
!! AAAGGTATTGTGTTATTTCC+TGG - Chr4:7967640-7967659 MsG0480018642.01.T01:intron 30.0%
!! AGGTTTTGTACAATTTCATC+AGG - Chr4:7971985-7972004 MsG0480018642.01.T01:CDS 30.0%
!! CTGTTAGAGAATTGATTTTC+GGG - Chr4:7970967-7970986 MsG0480018642.01.T01:intron 30.0%
!! GCTGTTAGAGAATTGATTTT+CGG - Chr4:7970966-7970985 MsG0480018642.01.T01:intron 30.0%
!! TCACTTTTCAAAGGTTAAGT+AGG - Chr4:7969126-7969145 MsG0480018642.01.T01:CDS 30.0%
!! TGACTTGGTTAAATTTCTAC+AGG - Chr4:7970295-7970314 MsG0480018642.01.T01:intron 30.0%
!!! AAGTATTTGTTTTTGGTCAC+AGG - Chr4:7968323-7968342 MsG0480018642.01.T01:intron 30.0%
!!! ACTCTGATTTTTTGCTAAAC+AGG + Chr4:7969073-7969092 None:intergenic 30.0%
!!! AGTATTTGTTTTTGGTCACA+GGG - Chr4:7968324-7968343 MsG0480018642.01.T01:intron 30.0%
!!! CATATTTTGATTGACTACTC+AGG - Chr4:7965736-7965755 MsG0480018642.01.T01:intron 30.0%
!!! GATTTTCTTTCTGTCGTTTT+AGG + Chr4:7971210-7971229 None:intergenic 30.0%
!!! TCAAGACTTTTTTAAAAGCC+TGG - Chr4:7964997-7965016 MsG0480018642.01.T01:intron 30.0%
!!! TGCCAAAGTTTTGAATCAAT+TGG - Chr4:7969848-7969867 MsG0480018642.01.T01:CDS 30.0%
!!! TTGTATATTCTTTTGGAGTG+GGG - Chr4:7970917-7970936 MsG0480018642.01.T01:CDS 30.0%
AAACCGCCATTACCTATTAA+AGG + Chr4:7968976-7968995 None:intergenic 35.0%
AAATAGAATTGCTGCACTGA+AGG - Chr4:7971432-7971451 MsG0480018642.01.T01:intron 35.0%
AACTCAGGTCCTAAAATTCA+AGG + Chr4:7966992-7967011 None:intergenic 35.0%
AATAGTGGTCAATGTGTCAA+AGG - Chr4:7971965-7971984 MsG0480018642.01.T01:CDS 35.0%
AATCTCAACTGGATATTACC+AGG + Chr4:7967661-7967680 None:intergenic 35.0%
AATGTGGATAGAGTTACTCA+AGG - Chr4:7966857-7966876 MsG0480018642.01.T01:intron 35.0%
ACAAGCGCTAAATTTCACAT+GGG + Chr4:7969486-7969505 None:intergenic 35.0%
ACAGCGTTCATTATAGTACA+TGG + Chr4:7966271-7966290 None:intergenic 35.0%
ACTTAAGAAAGACATCCACT+AGG + Chr4:7972160-7972179 None:intergenic 35.0%
ACTTACCATCTCATCTTAGT+GGG + Chr4:7965291-7965310 None:intergenic 35.0%
ACTTGCTTTCATGATTTCTG+GGG - Chr4:7971305-7971324 MsG0480018642.01.T01:intron 35.0%
AGAAAAACTGAGTGTAAGCA+CGG + Chr4:7965596-7965615 None:intergenic 35.0%
AGAAGATGGAAAATCAGTAG+GGG + Chr4:7964382-7964401 None:intergenic 35.0%
AGCTTGTACATATATGTAGG+TGG - Chr4:7972017-7972036 MsG0480018642.01.T01:CDS 35.0%
AGTGAAACAAAGCTCAACTT+TGG + Chr4:7966671-7966690 None:intergenic 35.0%
ATATACAATCTTCACTTCCC+AGG - Chr4:7971485-7971504 MsG0480018642.01.T01:intron 35.0%
ATCAGAGTTGCTAATTCATG+TGG - Chr4:7969085-7969104 MsG0480018642.01.T01:CDS 35.0%
ATGAAAGAATCATGCCAGAA+TGG + Chr4:7964344-7964363 None:intergenic 35.0%
ATGATATATTGATCCCCTAG+TGG - Chr4:7972142-7972161 MsG0480018642.01.T01:CDS 35.0%
ATGGAAATACCCAAAGTTGT+GGG - Chr4:7970443-7970462 MsG0480018642.01.T01:intron 35.0%
ATGTTCAAATGGCTGAATAG+TGG - Chr4:7971950-7971969 MsG0480018642.01.T01:CDS 35.0%
ATTGATGGAACTAAGTTCGA+GGG + Chr4:7964618-7964637 None:intergenic 35.0%
ATTTGTCATGCAGTTTCCTT+TGG - Chr4:7965684-7965703 MsG0480018642.01.T01:intron 35.0%
CAAATTCAGATCTGTGAAAC+AGG + Chr4:7965519-7965538 None:intergenic 35.0%
CAATCCTAGAATCCAAAACT+TGG + Chr4:7969159-7969178 None:intergenic 35.0%
CAGAAGATGGAAAATCAGTA+GGG + Chr4:7964383-7964402 None:intergenic 35.0%
CATGACTAAATGTGTGTTGT+AGG - Chr4:7970419-7970438 MsG0480018642.01.T01:intron 35.0%
CCTACATATATGTACAAGCT+AGG + Chr4:7972017-7972036 None:intergenic 35.0%
CGTACAGTATTACAAGCAAT+AGG - Chr4:7969991-7970010 MsG0480018642.01.T01:intron 35.0%
CTAAATGTGTGTTGTAGGTA+TGG - Chr4:7970424-7970443 MsG0480018642.01.T01:intron 35.0%
CTAAGGATGTCTCAGATAAT+CGG - Chr4:7967534-7967553 MsG0480018642.01.T01:intron 35.0%
CTTAAGAAAGACATCCACTA+GGG + Chr4:7972159-7972178 None:intergenic 35.0%
CTTAATGATTTATCCGATGG+TGG + Chr4:7966728-7966747 None:intergenic 35.0%
CTTGGTTAAATTTCTACAGG+TGG - Chr4:7970298-7970317 MsG0480018642.01.T01:intron 35.0%
CTTTCTTTCAATTAGTTCCG+AGG + Chr4:7965868-7965887 None:intergenic 35.0%
GAACTTAGTTCCATCAATGT+CGG - Chr4:7964620-7964639 MsG0480018642.01.T01:three_prime_UTR 35.0%
GACGAAGAAATTTCTTCAAC+TGG - Chr4:7964300-7964319 MsG0480018642.01.T01:three_prime_UTR 35.0%
GAGATGGAATTCCCTTAAAA+AGG - Chr4:7969679-7969698 MsG0480018642.01.T01:intron 35.0%
GATAGTAGTGTTATCCATTC+TGG - Chr4:7964327-7964346 MsG0480018642.01.T01:three_prime_UTR 35.0%
GGAAATTATGCTTAAGTACC+AGG + Chr4:7967143-7967162 None:intergenic 35.0%
GGAAGTGAAGATTGTATATC+TGG + Chr4:7971484-7971503 None:intergenic 35.0%
GGAATTGATACTGAAAGAGA+TGG - Chr4:7969663-7969682 MsG0480018642.01.T01:intron 35.0%
GGTATACAAGTATCAGAAGA+TGG + Chr4:7964396-7964415 None:intergenic 35.0%
GTAGTGCACTTATGATGATT+GGG - Chr4:7969701-7969720 MsG0480018642.01.T01:CDS 35.0%
TAAAACGGTAAACCTGCATT+AGG + Chr4:7968474-7968493 None:intergenic 35.0%
TACAAAAACTTGTGGCAGAA+GGG - Chr4:7971182-7971201 MsG0480018642.01.T01:intron 35.0%
TACAAGCGCTAAATTTCACA+TGG + Chr4:7969487-7969506 None:intergenic 35.0%
TACTTACCATCTCATCTTAG+TGG + Chr4:7965292-7965311 None:intergenic 35.0%
TATGGAAATACCCAAAGTTG+TGG - Chr4:7970442-7970461 MsG0480018642.01.T01:intron 35.0%
TCAACATCAGATTCCTGAAA+AGG + Chr4:7967476-7967495 None:intergenic 35.0%
TCAGAAGATGGAAAATCAGT+AGG + Chr4:7964384-7964403 None:intergenic 35.0%
TCAGGAATCTGATGTTGAAA+AGG - Chr4:7967478-7967497 MsG0480018642.01.T01:intron 35.0%
TCCAACTCAGATCATTTCAT+AGG + Chr4:7968074-7968093 None:intergenic 35.0%
TCCTATGAAATGATCTGAGT+TGG - Chr4:7968070-7968089 MsG0480018642.01.T01:intron 35.0%
TCTTAAATTGGTCGCAACAT+TGG - Chr4:7972079-7972098 MsG0480018642.01.T01:CDS 35.0%
TCTTCTGATACTTGTATACC+TGG - Chr4:7964396-7964415 MsG0480018642.01.T01:three_prime_UTR 35.0%
TGAGGTTAAGTGCTTGATAT+AGG - Chr4:7964963-7964982 MsG0480018642.01.T01:intron 35.0%
TGATCTTGCAGATGAACAAA+GGG - Chr4:7964770-7964789 MsG0480018642.01.T01:three_prime_UTR 35.0%
TGATGCATTGTCAGAAACTT+TGG - Chr4:7964512-7964531 MsG0480018642.01.T01:three_prime_UTR 35.0%
TGATTAGAGTCTATTGACAG+CGG - Chr4:7967397-7967416 MsG0480018642.01.T01:intron 35.0%
TTAAGAAAGACATCCACTAG+GGG + Chr4:7972158-7972177 None:intergenic 35.0%
TTCAGTAGGAATGGCAATAT+TGG + Chr4:7968801-7968820 None:intergenic 35.0%
TTGAGAAAGAATAGAGCAGA+AGG + Chr4:7971286-7971305 None:intergenic 35.0%
TTGATCTTGCAGATGAACAA+AGG - Chr4:7964769-7964788 MsG0480018642.01.T01:three_prime_UTR 35.0%
TTTACTCCTTCAATAACCGA+AGG + Chr4:7967696-7967715 None:intergenic 35.0%
TTTCAATTAGTTCCGAGGTT+AGG + Chr4:7965863-7965882 None:intergenic 35.0%
! AAATGACTTGGGCATTCATT+GGG - Chr4:7970823-7970842 MsG0480018642.01.T01:intron 35.0%
! ATTTTTACATTGGCCATGTC+AGG - Chr4:7968598-7968617 MsG0480018642.01.T01:intron 35.0%
! CAACTTGCTTTCATGATTTC+TGG - Chr4:7971303-7971322 MsG0480018642.01.T01:intron 35.0%
! CCTAGCTTGTACATATATGT+AGG - Chr4:7972014-7972033 MsG0480018642.01.T01:CDS 35.0%
! CTTTGTTTCACTTCTAATGC+AGG - Chr4:7966679-7966698 MsG0480018642.01.T01:intron 35.0%
! GAGACCTACATTTTCAAAGT+TGG + Chr4:7966063-7966082 None:intergenic 35.0%
! TAAATGACTTGGGCATTCAT+TGG - Chr4:7970822-7970841 MsG0480018642.01.T01:intron 35.0%
! TACCTTTTGTGAATCAGCAA+TGG + Chr4:7967344-7967363 None:intergenic 35.0%
! TAGAGATTCTTTTCCACCAT+CGG - Chr4:7966712-7966731 MsG0480018642.01.T01:intron 35.0%
! TCAATTTTATCCCCATTTCC+AGG + Chr4:7966818-7966837 None:intergenic 35.0%
! TGACAAGAAAAGTAGCTTTG+AGG + Chr4:7970169-7970188 None:intergenic 35.0%
! TGCTTTTGCAACAATTTCCA+CGG + Chr4:7965718-7965737 None:intergenic 35.0%
! TGTGGAGATTTGTGTCATTA+AGG - Chr4:7965326-7965345 MsG0480018642.01.T01:intron 35.0%
! TTCTTGTTTGTCCATTTGCA+AGG - Chr4:7966645-7966664 MsG0480018642.01.T01:CDS 35.0%
!! ATGTTCTAATGTGTTTCTGG+TGG - Chr4:7971363-7971382 MsG0480018642.01.T01:intron 35.0%
!! GACAAGAAAAGTAGCTTTGA+GGG + Chr4:7970168-7970187 None:intergenic 35.0%
!! TAGCTTTGAGGGATCTATAT+GGG + Chr4:7970157-7970176 None:intergenic 35.0%
!!! AAATTTGTTTTGGTTTGGGC+AGG - Chr4:7971615-7971634 MsG0480018642.01.T01:intron 35.0%
!!! AATTTGTTTTGGTTTGGGCA+GGG - Chr4:7971616-7971635 MsG0480018642.01.T01:intron 35.0%
!!! AGAACCAAGTTTTGGATTCT+AGG - Chr4:7969152-7969171 MsG0480018642.01.T01:intron 35.0%
!!! ATTTTTTTCAACTCCCGACT+TGG - Chr4:7966101-7966120 MsG0480018642.01.T01:intron 35.0%
!!! GTTTTTTGCTTTGTGCACAA+AGG - Chr4:7967622-7967641 MsG0480018642.01.T01:CDS 35.0%
!!! TTTTTTTCAACTCCCGACTT+GGG - Chr4:7966102-7966121 MsG0480018642.01.T01:intron 35.0%
AAACAAGTTTCTCGAATGGG+AGG + Chr4:7966917-7966936 None:intergenic 40.0%
AAACATTGTTAACCTGCCTC+CGG - Chr4:7969000-7969019 MsG0480018642.01.T01:CDS 40.0%
AAATACAGACCACTGTTAGG+AGG + Chr4:7966602-7966621 None:intergenic 40.0%
AAATACCCAAAGTTGTGGGT+GGG - Chr4:7970447-7970466 MsG0480018642.01.T01:intron 40.0%
AAGAACAAAGTGCAGTAGAG+AGG - Chr4:7969327-7969346 MsG0480018642.01.T01:CDS 40.0%
AAGCAAATATCTGTAGCTGG+AGG - Chr4:7964837-7964856 MsG0480018642.01.T01:CDS 40.0%
AAGGGAACATCAGAAGCTAA+AGG + Chr4:7965082-7965101 None:intergenic 40.0%
AAGTGAGAATCTCCTAATGC+AGG - Chr4:7968459-7968478 MsG0480018642.01.T01:intron 40.0%
AATGAACCGTTGTCTTTGAG+TGG - Chr4:7967506-7967525 MsG0480018642.01.T01:intron 40.0%
AATGTTTGCCTTGTGTGTCA+GGG - Chr4:7966474-7966493 MsG0480018642.01.T01:intron 40.0%
ACAACTGGAGCAATCATCTT+TGG + Chr4:7964750-7964769 None:intergenic 40.0%
ACCTCATCTTTCAGTAGGAA+TGG + Chr4:7968810-7968829 None:intergenic 40.0%
ACTGTACGCATGAACAGTAA+AGG + Chr4:7969979-7969998 None:intergenic 40.0%
ACTTGCTTATTTAGGAGTCG+AGG - Chr4:7964881-7964900 MsG0480018642.01.T01:CDS 40.0%
AGAACATCTTGCTGCTCATT+TGG - Chr4:7971159-7971178 MsG0480018642.01.T01:intron 40.0%
AGAATCTCTGCATCCTGTAA+AGG + Chr4:7968774-7968793 None:intergenic 40.0%
AGATTCTCACTTCCATTTGG+GGG + Chr4:7968451-7968470 None:intergenic 40.0%
AGCAAAACGCCAAATGATTG+AGG + Chr4:7970501-7970520 None:intergenic 40.0%
AGGAGATTCTCACTTCCATT+TGG + Chr4:7968454-7968473 None:intergenic 40.0%
AGTACAAAACCCCAAGAGTT+AGG + Chr4:7967881-7967900 None:intergenic 40.0%
AGTCTAAGAGCCTAACTCTT+GGG - Chr4:7967868-7967887 MsG0480018642.01.T01:intron 40.0%
AGTGTTGTGCGACAGAATTT+AGG - Chr4:7970085-7970104 MsG0480018642.01.T01:CDS 40.0%
ATACAGGGATCATCACAATC+TGG - Chr4:7969600-7969619 MsG0480018642.01.T01:intron 40.0%
ATATACAGAAGCTGCAGTTG+TGG + Chr4:7966571-7966590 None:intergenic 40.0%
ATATCAGTGGAAGCCAATGA+GGG + Chr4:7964543-7964562 None:intergenic 40.0%
ATGAGGAAAGCCTACTAGAT+TGG + Chr4:7967920-7967939 None:intergenic 40.0%
ATGTACCCACTAAGATGAGA+TGG - Chr4:7965283-7965302 MsG0480018642.01.T01:intron 40.0%
ATTATATCGGATCCCCCAAA+TGG - Chr4:7968436-7968455 MsG0480018642.01.T01:intron 40.0%
CAAACTAGTCAAACACAGAC+AGG - Chr4:7971752-7971771 MsG0480018642.01.T01:CDS 40.0%
CAGTAGAGAGGAATGAAACA+AGG - Chr4:7969339-7969358 MsG0480018642.01.T01:CDS 40.0%
CATTGATGGAACTAAGTTCG+AGG + Chr4:7964619-7964638 None:intergenic 40.0%
CATTTCGACCAAAAGAATCC+AGG + Chr4:7964494-7964513 None:intergenic 40.0%
CTAACCCCTATAATCTCAAC+TGG + Chr4:7967672-7967691 None:intergenic 40.0%
CTATTAACCACATTTACCCG+AGG - Chr4:7965134-7965153 MsG0480018642.01.T01:intron 40.0%
CTGTACGCATGAACAGTAAA+GGG + Chr4:7969978-7969997 None:intergenic 40.0%
CTTCACCAAATAACCTGTAG+AGG + Chr4:7966521-7966540 None:intergenic 40.0%
CTTGTTTAATGATCGAGTCG+AGG - Chr4:7971110-7971129 MsG0480018642.01.T01:intron 40.0%
GAAGCAAGGTTTGAAAACTC+AGG + Chr4:7967007-7967026 None:intergenic 40.0%
GACCAGATAGTTTAAGCATG+AGG + Chr4:7965455-7965474 None:intergenic 40.0%
GAGATTCTCACTTCCATTTG+GGG + Chr4:7968452-7968471 None:intergenic 40.0%
GATAAGCATGCATTCGACTA+GGG + Chr4:7965567-7965586 None:intergenic 40.0%
GATTAGAGTCTATTGACAGC+GGG - Chr4:7967398-7967417 MsG0480018642.01.T01:intron 40.0%
GATTTATCTGCCGACATTGA+TGG + Chr4:7964633-7964652 None:intergenic 40.0%
GCACGTAGATACATCTTACA+TGG + Chr4:7970721-7970740 None:intergenic 40.0%
GCTTAGTCTCAGTAAGGTTT+AGG + Chr4:7971875-7971894 None:intergenic 40.0%
GGAATCACACACATTGAATG+TGG - Chr4:7966841-7966860 MsG0480018642.01.T01:intron 40.0%
GGAGATTCTCACTTCCATTT+GGG + Chr4:7968453-7968472 None:intergenic 40.0%
GGGGATCCGATATAATTTCA+AGG + Chr4:7968432-7968451 None:intergenic 40.0%
GGTAGTGCACTTATGATGAT+TGG - Chr4:7969700-7969719 MsG0480018642.01.T01:CDS 40.0%
GTAAGAAGCTCACTTGTACA+AGG - Chr4:7970030-7970049 MsG0480018642.01.T01:CDS 40.0%
GTACAAAAACTTGTGGCAGA+AGG - Chr4:7971181-7971200 MsG0480018642.01.T01:intron 40.0%
GTGAAGATTGTATATCTGGC+TGG + Chr4:7971480-7971499 None:intergenic 40.0%
GTGTTGCATACACTTACTGA+TGG - Chr4:7968620-7968639 MsG0480018642.01.T01:intron 40.0%
GTTAGTCCTTCGGTTATTGA+AGG - Chr4:7967687-7967706 MsG0480018642.01.T01:intron 40.0%
GTTGTGGAAGAAAAGAAGTC+AGG + Chr4:7966555-7966574 None:intergenic 40.0%
TAAAGGACCAACCAGGTATT+AGG + Chr4:7968757-7968776 None:intergenic 40.0%
TAACACCAGTAGCACCAATT+TGG - Chr4:7970860-7970879 MsG0480018642.01.T01:intron 40.0%
TACTAATGCTAAGGGAAGCA+AGG + Chr4:7967021-7967040 None:intergenic 40.0%
TATTATGGAGACTAGAGCAC+AGG + Chr4:7970585-7970604 None:intergenic 40.0%
TCATCTGCAAGATCAACAAC+TGG + Chr4:7964765-7964784 None:intergenic 40.0%
TCCCAGGTTCATTAATCACT+CGG - Chr4:7971501-7971520 MsG0480018642.01.T01:intron 40.0%
TCTCGTTAATTGTATGGTGC+AGG - Chr4:7968351-7968370 MsG0480018642.01.T01:intron 40.0%
TGAAACATTCCTCCTAACAG+TGG - Chr4:7966590-7966609 MsG0480018642.01.T01:intron 40.0%
TGAACTCTTTCACCTAACCT+CGG - Chr4:7965848-7965867 MsG0480018642.01.T01:intron 40.0%
TGAGACAAGCAACTCTGATA+AGG - Chr4:7971775-7971794 MsG0480018642.01.T01:CDS 40.0%
TGATAAGCATGCATTCGACT+AGG + Chr4:7965568-7965587 None:intergenic 40.0%
TGATACTTGTATACCTGGAG+TGG - Chr4:7964401-7964420 MsG0480018642.01.T01:three_prime_UTR 40.0%
TGCCTCATGCTTAAACTATC+TGG - Chr4:7965450-7965469 MsG0480018642.01.T01:intron 40.0%
TTGCCTACATCATCTATGTC+AGG + Chr4:7964450-7964469 None:intergenic 40.0%
TTTAATGCAGCTTCCAGTTG+TGG + Chr4:7971415-7971434 None:intergenic 40.0%
TTTGGCAATACTAGACGAGA+AGG + Chr4:7964732-7964751 None:intergenic 40.0%
! AATAGGTGCTTTTCCAACAC+TGG - Chr4:7970008-7970027 MsG0480018642.01.T01:intron 40.0%
! ATCATTTGGCGTTTTGCTTC+AGG - Chr4:7970503-7970522 MsG0480018642.01.T01:intron 40.0%
! CTACAGGTGGACTTTATCAT+GGG - Chr4:7970311-7970330 MsG0480018642.01.T01:intron 40.0%
! GAAGTACCTCATCTTTCAGT+AGG + Chr4:7968815-7968834 None:intergenic 40.0%
! GCTTTTGCAACAATTTCCAC+GGG + Chr4:7965717-7965736 None:intergenic 40.0%
! GTAGGGTTAGAACCAAGTTT+TGG - Chr4:7969144-7969163 MsG0480018642.01.T01:intron 40.0%
! GTTATTTGGTGAAGCTGAAG+TGG - Chr4:7966527-7966546 MsG0480018642.01.T01:intron 40.0%
! TAACTGAAGTGTCTACATGC+AGG - Chr4:7969767-7969786 MsG0480018642.01.T01:CDS 40.0%
! TACAGGTGGACTTTATCATG+GGG - Chr4:7970312-7970331 MsG0480018642.01.T01:intron 40.0%
! TCTACAGGTGGACTTTATCA+TGG - Chr4:7970310-7970329 MsG0480018642.01.T01:intron 40.0%
!! GATTATAGGGGTTAGTCCTT+CGG - Chr4:7967677-7967696 MsG0480018642.01.T01:intron 40.0%
!! GTAGCTTTGAGGGATCTATA+TGG + Chr4:7970158-7970177 None:intergenic 40.0%
!! GTCCATTGCTGATTCACAAA+AGG - Chr4:7967339-7967358 MsG0480018642.01.T01:intron 40.0%
!! GTCTGTGTTTGACTAGTTTG+TGG + Chr4:7971752-7971771 None:intergenic 40.0%
!! TTAGACTAACTTTGGGGTTG+TGG - Chr4:7967943-7967962 MsG0480018642.01.T01:CDS 40.0%
!!! ATTTGTTTTGGTTTGGGCAG+GGG - Chr4:7971617-7971636 MsG0480018642.01.T01:intron 40.0%
!!! TTTTTTCAACTCCCGACTTG+GGG - Chr4:7966103-7966122 MsG0480018642.01.T01:intron 40.0%
!!! TTTTTTTTCCAGGTCTGTGC+TGG - Chr4:7971685-7971704 MsG0480018642.01.T01:intron 40.0%
AACATGTGCTCTCCTGGAAA+TGG - Chr4:7966803-7966822 MsG0480018642.01.T01:CDS 45.0%
AACTTAGAGAGTGGAATCCC+TGG - Chr4:7964468-7964487 MsG0480018642.01.T01:three_prime_UTR 45.0%
AAGAATCCCACCCACAACTT+TGG + Chr4:7970456-7970475 None:intergenic 45.0%
AATTTAGCGCTTGTAGCTGC+AGG - Chr4:7969492-7969511 MsG0480018642.01.T01:intron 45.0%
ACATGTGCTCTCCTGGAAAT+GGG - Chr4:7966804-7966823 MsG0480018642.01.T01:CDS 45.0%
ACCCAATGTACGCACTAGTA+TGG + Chr4:7968395-7968414 None:intergenic 45.0%
AGAATCCCACCCACAACTTT+GGG + Chr4:7970455-7970474 None:intergenic 45.0%
AGGTCATATCAGCAAACCTC+GGG + Chr4:7965153-7965172 None:intergenic 45.0%
AGTGAGCTTCTTACCAGTGT+TGG + Chr4:7970024-7970043 None:intergenic 45.0%
AGTGTATGCAACACCTGACA+TGG + Chr4:7968614-7968633 None:intergenic 45.0%
ATATACAGAGTGGGACTTCC+AGG + Chr4:7965018-7965037 None:intergenic 45.0%
ATGTACACTGAACAGCTGAG+TGG + Chr4:7970396-7970415 None:intergenic 45.0%
CAAGAGTTAGGCTCTTAGAC+TGG + Chr4:7967869-7967888 None:intergenic 45.0%
CAATAAATGCTCTTCCCTGC+AGG - Chr4:7969936-7969955 MsG0480018642.01.T01:intron 45.0%
CAATGTTTGCCTTGTGTGTC+AGG - Chr4:7966473-7966492 MsG0480018642.01.T01:intron 45.0%
CACAACTGAAGTAGCTGTTG+AGG + Chr4:7964706-7964725 None:intergenic 45.0%
CAGAATCGATATTGGCAGCA+CGG + Chr4:7971659-7971678 None:intergenic 45.0%
CAGCTGTGCAATGACAAATG+AGG - Chr4:7964945-7964964 MsG0480018642.01.T01:intron 45.0%
CAGGTCATATCAGCAAACCT+CGG + Chr4:7965154-7965173 None:intergenic 45.0%
CAGTCTAAGAGCCTAACTCT+TGG - Chr4:7967867-7967886 MsG0480018642.01.T01:intron 45.0%
CATACGCAGACCAATCTAGT+AGG - Chr4:7967907-7967926 MsG0480018642.01.T01:intron 45.0%
CATATCAGTGGAAGCCAATG+AGG + Chr4:7964544-7964563 None:intergenic 45.0%
CCAATTTGGATGCAACTCGA+TGG - Chr4:7970874-7970893 MsG0480018642.01.T01:intron 45.0%
CCCAATGTACGCACTAGTAT+GGG + Chr4:7968394-7968413 None:intergenic 45.0%
CCCATACTAGTGCGTACATT+GGG - Chr4:7968391-7968410 MsG0480018642.01.T01:intron 45.0%
CCTACATCATCTATGTCAGG+AGG + Chr4:7964447-7964466 None:intergenic 45.0%
CCTCCTGACATAGATGATGT+AGG - Chr4:7964444-7964463 MsG0480018642.01.T01:three_prime_UTR 45.0%
CGTGTCCTCTACAGGTTATT+TGG - Chr4:7966513-7966532 MsG0480018642.01.T01:intron 45.0%
CTGAAGCTACTGATGCTGAA+GGG - Chr4:7967317-7967336 MsG0480018642.01.T01:intron 45.0%
GAAATACCCAAAGTTGTGGG+TGG - Chr4:7970446-7970465 MsG0480018642.01.T01:intron 45.0%
GAAGCAGCTTAGTCTCAGTA+AGG + Chr4:7971881-7971900 None:intergenic 45.0%
GACACCAAGCTATTGACATC+TGG + Chr4:7964684-7964703 None:intergenic 45.0%
GATGGAAAATCAGTAGGGGA+TGG + Chr4:7964378-7964397 None:intergenic 45.0%
GATGTAGGCAACTTAGAGAG+TGG - Chr4:7964459-7964478 MsG0480018642.01.T01:three_prime_UTR 45.0%
GATTGACTACTCAGGTCATG+AGG - Chr4:7965744-7965763 MsG0480018642.01.T01:intron 45.0%
GCAAACATTGTCAGCATCTG+TGG + Chr4:7966463-7966482 None:intergenic 45.0%
GCCATTCCTACTGAAAGATG+AGG - Chr4:7968806-7968825 MsG0480018642.01.T01:intron 45.0%
GCCGAGTGATTAATGAACCT+GGG + Chr4:7971505-7971524 None:intergenic 45.0%
GGAGGCAGGTTAACAATGTT+TGG + Chr4:7969001-7969020 None:intergenic 45.0%
GTACTGCCACTCAAAGACAA+CGG + Chr4:7967515-7967534 None:intergenic 45.0%
GTCTAAGAGCCTAACTCTTG+GGG - Chr4:7967869-7967888 MsG0480018642.01.T01:intron 45.0%
GTCTTTGAGTGGCAGTACTA+AGG - Chr4:7967517-7967536 MsG0480018642.01.T01:intron 45.0%
TATTCCGCCTAATACCTGGT+TGG - Chr4:7968747-7968766 MsG0480018642.01.T01:intron 45.0%
TCAGTATTCCGCCTAATACC+TGG - Chr4:7968743-7968762 MsG0480018642.01.T01:intron 45.0%
TCCCATACTAGTGCGTACAT+TGG - Chr4:7968390-7968409 MsG0480018642.01.T01:intron 45.0%
TGAGCCTCAGTAACAGAAAG+TGG + Chr4:7967587-7967606 None:intergenic 45.0%
TGATGGTACGATCCCTTCTA+AGG - Chr4:7968637-7968656 MsG0480018642.01.T01:intron 45.0%
TGCATCACTTGGAAGAAGTG+CGG - Chr4:7967103-7967122 MsG0480018642.01.T01:intron 45.0%
TGCCGAGTGATTAATGAACC+TGG + Chr4:7971506-7971525 None:intergenic 45.0%
TGCTCCAGATGTCAATAGCT+TGG - Chr4:7964677-7964696 MsG0480018642.01.T01:three_prime_UTR 45.0%
TGCTCGTCTTGTAAAGAAGC+AGG - Chr4:7970340-7970359 MsG0480018642.01.T01:intron 45.0%
TGGCATTGTTTCCGATTCTC+AGG - Chr4:7971715-7971734 MsG0480018642.01.T01:intron 45.0%
TGGCTAGCATGAGCAATCAA+TGG + Chr4:7971460-7971479 None:intergenic 45.0%
TTACTTTCGGCTCTTCTTGC+AGG - Chr4:7967201-7967220 MsG0480018642.01.T01:intron 45.0%
TTAGAGAACATGTGCTCTCC+TGG - Chr4:7966797-7966816 MsG0480018642.01.T01:CDS 45.0%
TTCCACGGGTCTAATTCCAA+AGG + Chr4:7965703-7965722 None:intergenic 45.0%
TTCTGTTACTGAGGCTCAGA+GGG - Chr4:7967589-7967608 MsG0480018642.01.T01:CDS 45.0%
TTTCTGTTACTGAGGCTCAG+AGG - Chr4:7967588-7967607 MsG0480018642.01.T01:CDS 45.0%
! AAAGAGTGCAGTGCATCACT+TGG - Chr4:7967092-7967111 MsG0480018642.01.T01:intron 45.0%
! AGGAATTTGCTCAACCTGCA+GGG + Chr4:7969953-7969972 None:intergenic 45.0%
! ATACCTGGTTGGTCCTTTAC+AGG - Chr4:7968758-7968777 MsG0480018642.01.T01:intron 45.0%
! CCATCGAGTTGCATCCAAAT+TGG + Chr4:7970877-7970896 None:intergenic 45.0%
! CTCAAGGTCTAAGTGCTGTA+TGG - Chr4:7966873-7966892 MsG0480018642.01.T01:intron 45.0%
! TCTGAAGCTACTGATGCTGA+AGG - Chr4:7967316-7967335 MsG0480018642.01.T01:intron 45.0%
! TGCTTTCATGATTTCTGGGG+TGG - Chr4:7971308-7971327 MsG0480018642.01.T01:intron 45.0%
! TGGAGCAGAGTGTTACTGTT+AGG - Chr4:7972110-7972129 MsG0480018642.01.T01:CDS 45.0%
!! ACATCTGGAGCAACTGCTTT+TGG + Chr4:7964669-7964688 None:intergenic 45.0%
!! ACTTGTAGCTTGCTCTTGAC+TGG + Chr4:7964580-7964599 None:intergenic 45.0%
!! CATCTGGAGCAACTGCTTTT+GGG + Chr4:7964668-7964687 None:intergenic 45.0%
!! CTCAACTTTGGCCTTGCAAA+TGG + Chr4:7966659-7966678 None:intergenic 45.0%
!! CTGACTTGGAACCTGAGAAT+CGG + Chr4:7971729-7971748 None:intergenic 45.0%
!! GCTTGCTGTAGACGATTCTT+TGG + Chr4:7971819-7971838 None:intergenic 45.0%
!! TGACTAGTTTGTGGCTGACT+TGG + Chr4:7971743-7971762 None:intergenic 45.0%
!! TGCATCCAAATTGGTGCTAC+TGG + Chr4:7970868-7970887 None:intergenic 45.0%
!! TTCCTTTGGAATTAGACCCG+TGG - Chr4:7965698-7965717 MsG0480018642.01.T01:intron 45.0%
!!! TTTTTCAACTCCCGACTTGG+GGG - Chr4:7966104-7966123 MsG0480018642.01.T01:intron 45.0%
AACTTTGGCTGCTCCCTCAT+TGG - Chr4:7964527-7964546 MsG0480018642.01.T01:three_prime_UTR 50.0%
AAGAACAACCAGCACAGACC+TGG + Chr4:7971696-7971715 None:intergenic 50.0%
AATGCAGCTTCCAGTTGTGG+TGG + Chr4:7971412-7971431 None:intergenic 50.0%
ACTCATGTCCCTGACACACA+AGG + Chr4:7966485-7966504 None:intergenic 50.0%
ACTTCAGCTGGTGTAAGCAC+TGG + Chr4:7969627-7969646 None:intergenic 50.0%
AGCATGCATTCGACTAGGGA+TGG + Chr4:7965563-7965582 None:intergenic 50.0%
AGGACCAACCAGGTATTAGG+CGG + Chr4:7968754-7968773 None:intergenic 50.0%
AGTGCTCCTTGGAACTTCTC+CGG + Chr4:7969022-7969041 None:intergenic 50.0%
CAGCAAACCTCGGGTAAATG+TGG + Chr4:7965144-7965163 None:intergenic 50.0%
CATCCTGTAAAGGACCAACC+AGG + Chr4:7968764-7968783 None:intergenic 50.0%
CATGTGCTCTCCTGGAAATG+GGG - Chr4:7966805-7966824 MsG0480018642.01.T01:CDS 50.0%
CGCATGAACAGTAAAGGGAG+AGG + Chr4:7969973-7969992 None:intergenic 50.0%
CGGCAATCAAGCACATCTGA+GGG - Chr4:7967554-7967573 MsG0480018642.01.T01:intron 50.0%
CTCAGTAACAGAAAGTGGCG+AGG + Chr4:7967582-7967601 None:intergenic 50.0%
GACCAAAAGAATCCAGGCCA+GGG + Chr4:7964488-7964507 None:intergenic 50.0%
TCGGCAATCAAGCACATCTG+AGG - Chr4:7967553-7967572 MsG0480018642.01.T01:intron 50.0%
TCTGTTACTGAGGCTCAGAG+GGG - Chr4:7967590-7967609 MsG0480018642.01.T01:CDS 50.0%
TGACATTGCGTGTCCTCTAC+AGG - Chr4:7966505-7966524 MsG0480018642.01.T01:intron 50.0%
! ATCCCTGGCCTGGATTCTTT+TGG - Chr4:7964483-7964502 MsG0480018642.01.T01:three_prime_UTR 50.0%
! CTCGCCACTTTCTGTTACTG+AGG - Chr4:7967580-7967599 MsG0480018642.01.T01:intron 50.0%
! GAGGAATTTGCTCAACCTGC+AGG + Chr4:7969954-7969973 None:intergenic 50.0%
!! AGGTCTGTGCTGGTTGTTCT+TGG - Chr4:7971695-7971714 MsG0480018642.01.T01:intron 50.0%
!! GAGAAGTTCCAAGGAGCACT+TGG - Chr4:7969022-7969041 MsG0480018642.01.T01:CDS 50.0%
!! TCGCAACATTGGTTTGCTGC+TGG - Chr4:7972090-7972109 MsG0480018642.01.T01:CDS 50.0%
!!! TTTTCAACTCCCGACTTGGG+GGG - Chr4:7966105-7966124 MsG0480018642.01.T01:intron 50.0%
AGCACTTGGTCGCATACTGC+AGG - Chr4:7969036-7969055 MsG0480018642.01.T01:CDS 55.0%
CGACCAAAAGAATCCAGGCC+AGG + Chr4:7964489-7964508 None:intergenic 55.0%
GCGGATGAAAGCAATACGCC+TGG - Chr4:7967122-7967141 MsG0480018642.01.T01:intron 55.0%
GTATGCGACCAAGTGCTCCT+TGG + Chr4:7969033-7969052 None:intergenic 55.0%
TCAGCTACCTCCACCACAAC+TGG - Chr4:7971399-7971418 MsG0480018642.01.T01:intron 55.0%
! GTGCTGACATTCTCCACTCC+AGG + Chr4:7964417-7964436 None:intergenic 55.0%
ACAAGGTCAGCCCCCCAAGT+CGG + Chr4:7966118-7966137 None:intergenic 60.0%
AGAGAGTGGAATCCCTGGCC+TGG - Chr4:7964473-7964492 MsG0480018642.01.T01:three_prime_UTR 60.0%
CTGCCTCCGGAGAAGTTCCA+AGG - Chr4:7969013-7969032 MsG0480018642.01.T01:CDS 60.0%
CTTGGAACTTCTCCGGAGGC+AGG + Chr4:7969015-7969034 None:intergenic 60.0%
GCAGCTTCCAGTTGTGGTGG+AGG + Chr4:7971409-7971428 None:intergenic 60.0%
GCTCCTTGGAACTTCTCCGG+AGG + Chr4:7969019-7969038 None:intergenic 60.0%
CAAGGTCAGCCCCCCAAGTC+GGG + Chr4:7966117-7966136 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 7964270 7972371 7964270 ID=MsG0480018642.01;Name=MsG0480018642.01
Chr4 mRNA 7964270 7972371 7964270 ID=MsG0480018642.01.T01;Parent=MsG0480018642.01;Name=MsG0480018642.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.8|0.87|1|0.86|0.93|16|530|744
Chr4 exon 7964270 7964944 7964270 ID=MsG0480018642.01.T01:exon:1955;Parent=MsG0480018642.01.T01
Chr4 exon 7965135 7965238 7965135 ID=MsG0480018642.01.T01:exon:1954;Parent=MsG0480018642.01.T01
Chr4 exon 7966117 7966200 7966117 ID=MsG0480018642.01.T01:exon:1953;Parent=MsG0480018642.01.T01
Chr4 exon 7966280 7966324 7966280 ID=MsG0480018642.01.T01:exon:1952;Parent=MsG0480018642.01.T01
Chr4 exon 7966612 7966683 7966612 ID=MsG0480018642.01.T01:exon:1951;Parent=MsG0480018642.01.T01
Chr4 exon 7966772 7966852 7966772 ID=MsG0480018642.01.T01:exon:1950;Parent=MsG0480018642.01.T01
Chr4 exon 7967584 7967658 7967584 ID=MsG0480018642.01.T01:exon:1949;Parent=MsG0480018642.01.T01
Chr4 exon 7967814 7967861 7967814 ID=MsG0480018642.01.T01:exon:1948;Parent=MsG0480018642.01.T01
Chr4 exon 7967938 7968021 7967938 ID=MsG0480018642.01.T01:exon:1947;Parent=MsG0480018642.01.T01
Chr4 exon 7968161 7968268 7968161 ID=MsG0480018642.01.T01:exon:1946;Parent=MsG0480018642.01.T01
Chr4 exon 7968980 7969159 7968980 ID=MsG0480018642.01.T01:exon:1945;Parent=MsG0480018642.01.T01
Chr4 exon 7969281 7969418 7969281 ID=MsG0480018642.01.T01:exon:1944;Parent=MsG0480018642.01.T01
Chr4 exon 7969689 7969940 7969689 ID=MsG0480018642.01.T01:exon:1943;Parent=MsG0480018642.01.T01
Chr4 exon 7970030 7970146 7970030 ID=MsG0480018642.01.T01:exon:1942;Parent=MsG0480018642.01.T01
Chr4 exon 7970876 7970944 7970876 ID=MsG0480018642.01.T01:exon:1941;Parent=MsG0480018642.01.T01
Chr4 exon 7971739 7972371 7971739 ID=MsG0480018642.01.T01:exon:1940;Parent=MsG0480018642.01.T01
Chr4 CDS 7971739 7972371 7971739 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7970876 7970944 7970876 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7970030 7970146 7970030 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7969689 7969940 7969689 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7969281 7969418 7969281 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7968980 7969159 7968980 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7968161 7968268 7968161 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7967938 7968021 7967938 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7967814 7967861 7967814 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7967584 7967658 7967584 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7966772 7966852 7966772 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7966612 7966683 7966612 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7966280 7966324 7966280 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7966117 7966200 7966117 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7965135 7965238 7965135 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 CDS 7964800 7964944 7964800 ID=MsG0480018642.01.T01:cds;Parent=MsG0480018642.01.T01
Chr4 three_prime_UTR 7964270 7964799 7964270 ID=MsG0480018642.01.T01:three_prime_utr;Parent=MsG0480018642.01.T01
Gene Sequence

>MsG0480018642.01.T01

ATGTACACAAATATTGTAGAAATCTCAAGGGACGAAGAAATTTCTTCAACTGGAGTAGATAGTAGTGTTATCCATTCTGGCATGATTCTTTCATCTCAAAATGCACCATCCCCTACTGATTTTCCATCTTCTGATACTTGTATACCTGGAGTGGAGAATGTCAGCACATCTCTGCCTCCTGACATAGATGATGTAGGCAACTTAGAGAGTGGAATCCCTGGCCTGGATTCTTTTGGTCGAAATGATGCATTGTCAGAAACTTTGGCTGCTCCCTCATTGGCTTCCACTGATATGCAAATAGAAGATGCCAGTCAAGAGCAAGCTACAAGTTTAGATAATAGGTCACCCTCGAACTTAGTTCCATCAATGTCGGCAGATAAATCTGAAGAGCTGAGCCCAAAAGCAGTTGCTCCAGATGTCAATAGCTTGGTGTCCTCAACAGCTACTTCAGTTGTGTTGCCTTCTCGTCTAGTATTGCCAAAGATGATTGCTCCAGTTGTTGATCTTGCAGATGAACAAAGGGATCATTTGCAAACATCATGCTTTATGCGCATCATTGATGCATATAAGCAAATATCTGTAGCTGGAGGCTCAAAAGTTCGATTTTCGATACTTGCTTATTTAGGAGTCGAGTTTCCTTTGGAATTAGACCCGTGGAAATTGTTGCAAAAGCATATTTTGATTGACTACTCAGGTCATGAGGGACATGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAAGCTGAAGTGGAGCCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGTATATGAAACATTCCTCCTAACAGTGGCAGAAGCACTTAGAGATTCTTTTCCACCATCGGATAAATCATTAAGTAAACTGCTTGGTGAATCTCCTTATTTACCAAAATCAGTTTTAAAGATTTTAGAGAACATGTGCTCTCCTGGAAATGGGGATAAAATTGAAAAGGAATCACACACATTGAATGTGGATAGAGTTACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTCTAAGGCCTCCCATTCGAGAAACTTGTTTGAAAATTGCTTTACAGGTAGCAAACAAACTTTATCCTTTATCATCAATTTCTAAGGAAATAGAAGATTTTGCAAAGGAAATGGTGTTCTCAGTGATGAGTAGTGATGCTTCTGAAGCTACTGATGCTGAAGGGTCCATTGCTGATTCACAAAAGGAATCTGATGTTGAAAAGGTTACAAATGAACCGTTGTCTTTGAGTGGCAGTACTAAGGATGTCTCAGATAATCGGCAATCAAGCACATCTGAGGGCACCTCGCCACTTTCTGTTACTGAGGCTCAGAGGGGCATGTCATTGTTTTTTGCTTTGTGCACAAAGGTATTGTGTTATTTCCTGGCTATTCATCGTCAGATTCCCATACTAGTGCGTACATTGGGTTCATCTTCAGATCTCCTTGAAATTATATCGGATCCCCCAAATGGAAGTGAGAATCTCCTAATGCAGGTGTTGCATACACTTACTGATGGTACGATCCCTTCTAAGGATTTAATAGTTGCCGTGAAAAGGTTACATGATTCAAAACTTAAGGATGCAGAGATTCTTATTCCAATATTGCCATTCCTACTGAAAGATGAGGTAATGGCGGTTTTTCCAAACATTGTTAACCTGCCTCCGGAGAAGTTCCAAGGAGCACTTGGTCGCATACTGCAGGTAACTGATGCGTGCAATGCTTGCTTTGAGCAGCGACAAACTTTTACTCAAGAAGTTCTTGCCAAAGTTTTGAATCAATTGGTTGAGCAAATTCCTCTCCCTTTACTGTTCATGCGTACAGTATTACAAGCAATAGGTGCTTTTCCAACACTGGTGGACTTTATCATGGGGATTCTTGCTCGTCTTGTAAAGAAGCAGGTATGGAAATACCCAAAGTTGTGGGTGGGATTCTTGAAGTGTTTGCAATTGACAAAACCTCAATCATTTGGCGTTTTGCTTCAGCTACCTCCACCACAACTGGAAGCTGCATTAAATAGAATTGCTGCACTGAAGGCACCATTGATTGCTCATGCTAGCCAGCCAGATATACAATCTTCACTTCCCAGGTCTGTGCTGGTTGTTCTTGGCATTGTTTCCGATTCTCAGGTTCCAAGTCAGCCACAAACTAGTCAAACACAGACAGGTGAGACAAGCAACTCTGATAAGGACACAATGACAGAAAAATCCAAAGAATCGTCTACAGCAAGCTAA
Protein sequence

>MsG0480018642.01.T01

MYTNIVEISRDEEISSTGVDSSVIHSGMILSSQNAPSPTDFPSSDTCIPGVENVSTSLPPDIDDVGNLESGIPGLDSFGRNDALSETLAAPSLASTDMQIEDASQEQATSLDNRSPSNLVPSMSADKSEELSPKAVAPDVNSLVSSTATSVVLPSRLVLPKMIAPVVDLADEQRDHLQTSCFMRIIDAYKQISVAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYSGHEGHELTLRVLYRLFGEAEVEPDFFSSTTAASVYETFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDKIEKESHTLNVDRVTQGLSAVWSLILLRPPIRETCLKIALQVANKLYPLSSISKEIEDFAKEMVFSVMSSDASEATDAEGSIADSQKESDVEKVTNEPLSLSGSTKDVSDNRQSSTSEGTSPLSVTEAQRGMSLFFALCTKVLCYFLAIHRQIPILVRTLGSSSDLLEIISDPPNGSENLLMQVLHTLTDGTIPSKDLIVAVKRLHDSKLKDAEILIPILPFLLKDEVMAVFPNIVNLPPEKFQGALGRILQVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILARLVKKQVWKYPKLWVGFLKCLQLTKPQSFGVLLQLPPPQLEAALNRIAALKAPLIAHASQPDIQSSLPRSVLVVLGIVSDSQVPSQPQTSQTQTGETSNSDKDTMTEKSKESSTAS*