AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080049014.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049014.01.T01 MTR_1g083120 93.916 526 14 1 381 888 422 947 0.0 1014
MsG0080049014.01.T01 MTR_1g083120 96.914 324 6 2 1 322 18 339 0.0 643
MsG0080049014.01.T01 MTR_1g083120 93.916 526 14 1 381 888 405 930 0.0 1013
MsG0080049014.01.T01 MTR_1g083120 96.914 324 6 2 1 322 1 322 0.0 642
MsG0080049014.01.T01 MTR_1g083120 91.156 441 20 2 381 802 405 845 0.0 829
MsG0080049014.01.T01 MTR_1g083120 96.914 324 6 2 1 322 1 322 0.0 633
MsG0080049014.01.T01 MTR_1g083120 92.791 430 13 1 381 792 405 834 0.0 828
MsG0080049014.01.T01 MTR_1g083120 96.914 324 6 2 1 322 1 322 0.0 641
MsG0080049014.01.T01 MTR_7g117445 37.365 554 257 11 381 853 384 928 6.06e-110 360
MsG0080049014.01.T01 MTR_7g117445 44.366 142 71 4 185 321 127 265 8.14e-26 115
MsG0080049014.01.T01 MTR_7g117445 37.365 554 257 11 381 853 384 928 6.12e-110 360
MsG0080049014.01.T01 MTR_7g117445 44.366 142 71 4 185 321 127 265 9.53e-26 114
MsG0080049014.01.T01 MTR_7g117445 37.091 550 264 10 381 853 384 928 1.06e-109 360
MsG0080049014.01.T01 MTR_7g117445 44.366 142 71 4 185 321 127 265 1.04e-25 114
MsG0080049014.01.T01 MTR_1g114150 40.980 449 210 8 426 850 632 1049 1.31e-96 327
MsG0080049014.01.T01 MTR_1g114150 37.500 112 65 3 198 305 343 453 9.26e-15 79.3
MsG0080049014.01.T01 MTR_4g132540 39.675 431 226 7 449 852 444 867 3.46e-96 322
MsG0080049014.01.T01 MTR_4g132540 34.524 168 87 6 191 355 162 309 3.64e-21 100
MsG0080049014.01.T01 MTR_1g069565 36.523 512 271 7 381 850 381 880 2.49e-94 317
MsG0080049014.01.T01 MTR_1g114130 37.087 515 255 9 381 857 562 1045 3.60e-94 320
MsG0080049014.01.T01 MTR_1g114130 36.036 111 68 3 198 305 327 437 2.27e-14 78.2
MsG0080049014.01.T01 MTR_5g065200 36.382 503 241 7 381 850 377 833 5.32e-93 312
MsG0080049014.01.T01 MTR_5g065200 33.537 164 90 4 177 321 107 270 9.31e-17 85.9
MsG0080049014.01.T01 MTR_1g114070 37.472 443 213 5 431 850 522 923 3.35e-89 305
MsG0080049014.01.T01 MTR_1g114070 39.062 128 71 3 192 316 219 342 6.88e-17 86.3
MsG0080049014.01.T01 MTR_7g117445 35.484 496 230 11 381 795 384 870 3.25e-87 297
MsG0080049014.01.T01 MTR_7g117445 44.366 142 71 4 185 321 127 265 1.02e-25 114
MsG0080049014.01.T01 MTR_2g024270 36.526 449 223 6 432 858 418 826 5.83e-86 293
MsG0080049014.01.T01 MTR_2g024270 37.241 145 84 4 183 321 137 280 2.94e-13 74.3
MsG0080049014.01.T01 MTR_5g047620 37.939 456 224 13 431 853 370 799 3.88e-84 288
MsG0080049014.01.T01 MTR_2g024140 35.068 442 217 5 434 852 294 688 4.67e-78 268
MsG0080049014.01.T01 MTR_2g024140 38.462 130 75 3 196 321 32 160 6.60e-20 95.5
MsG0080049014.01.T01 MTR_4g091520 33.800 500 264 10 416 852 784 1279 1.01e-77 276
MsG0080049014.01.T01 MTR_4g091520 25.616 203 131 5 115 308 187 378 1.82e-11 68.9
MsG0080049014.01.T01 MTR_1g008060 33.602 497 279 9 185 638 848 1336 6.95e-77 275
MsG0080049014.01.T01 MTR_1g008060 45.455 154 62 1 721 852 1536 1689 1.65e-35 146
MsG0080049014.01.T01 MTR_1g008060 33.602 497 279 9 185 638 857 1345 7.05e-77 275
MsG0080049014.01.T01 MTR_1g008060 45.455 154 62 1 721 852 1545 1698 1.62e-35 146
MsG0080049014.01.T01 MTR_2g011630 32.484 471 268 8 428 856 255 717 5.75e-76 263
MsG0080049014.01.T01 MTR_2g011630 32.696 471 267 8 428 856 287 749 7.40e-76 263
MsG0080049014.01.T01 MTR_2g011630 32.696 471 267 8 428 856 499 961 1.22e-74 264
MsG0080049014.01.T01 MTR_2g011630 34.746 118 72 3 195 308 204 320 7.63e-12 69.7
MsG0080049014.01.T01 MTR_0020s0100 35.172 435 191 11 430 833 316 690 4.03e-69 244
MsG0080049014.01.T01 MTR_1g114150 41.640 317 152 7 426 740 632 917 1.55e-60 223
MsG0080049014.01.T01 MTR_1g114150 37.500 112 65 3 198 305 343 453 8.16e-15 79.3
MsG0080049014.01.T01 MTR_2g024240 36.792 318 128 4 512 807 115 381 1.88e-57 202
MsG0080049014.01.T01 MTR_1g069565 35.263 380 214 6 381 740 381 748 3.61e-56 210
MsG0080049014.01.T01 MTR_1g069565 45.378 119 65 0 732 850 819 937 1.34e-29 127
MsG0080049014.01.T01 MTR_8g085480 93.269 104 5 1 59 162 1 102 3.45e-53 194
MsG0080049014.01.T01 MTR_4g091520 30.583 412 219 10 416 764 714 1121 1.04e-43 172
MsG0080049014.01.T01 MTR_4g091520 25.616 203 131 5 115 308 187 378 1.12e-11 69.3
MsG0080049014.01.T01 MTR_4g091520 30.583 412 219 10 416 764 749 1156 1.36e-43 172
MsG0080049014.01.T01 MTR_4g091520 25.616 203 131 5 115 308 187 378 1.24e-11 69.3
MsG0080049014.01.T01 MTR_4g091520 30.583 412 219 10 416 764 784 1191 1.68e-43 171
MsG0080049014.01.T01 MTR_4g091520 25.616 203 131 5 115 308 187 378 1.59e-11 68.9
MsG0080049014.01.T01 MTR_8g465700 39.344 183 106 2 443 625 2 179 2.97e-37 141
MsG0080049014.01.T01 MTR_5g031220 57.000 100 35 1 528 627 5 96 2.00e-29 113
MsG0080049014.01.T01 MTR_0295s0020 40.000 160 96 0 499 658 9 168 2.24e-29 115
MsG0080049014.01.T01 MTR_8g062940 25.146 342 202 11 198 494 33 365 3.83e-19 90.9
MsG0080049014.01.T01 MTR_8g465720 43.299 97 30 3 718 792 46 139 1.40e-16 78.6
MsG0080049014.01.T01 MTR_8g013920 51.190 84 37 2 536 619 40 119 1.87e-16 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049014.01.T01 AT1G09060 50.936 534 205 8 381 884 419 925 2.76e-169 516
MsG0080049014.01.T01 AT1G09060 52.695 334 138 7 2 322 5 331 2.37e-94 318
MsG0080049014.01.T01 AT1G09060 50.936 534 205 8 381 884 419 925 2.76e-169 516
MsG0080049014.01.T01 AT1G09060 52.695 334 138 7 2 322 5 331 2.37e-94 318
MsG0080049014.01.T01 AT1G09060 50.936 534 205 8 381 884 433 939 3.98e-169 516
MsG0080049014.01.T01 AT1G09060 52.695 334 138 7 2 322 19 345 4.34e-94 317
MsG0080049014.01.T01 AT1G09060 50.936 534 205 8 381 884 433 939 3.98e-169 516
MsG0080049014.01.T01 AT1G09060 52.695 334 138 7 2 322 19 345 4.34e-94 317
MsG0080049014.01.T01 AT4G00990 37.782 532 267 11 381 852 305 832 9.47e-109 355
MsG0080049014.01.T01 AT4G00990 33.962 159 99 3 168 321 50 207 1.90e-17 88.2
MsG0080049014.01.T01 AT1G11950 37.177 503 237 8 381 854 421 873 6.29e-103 340
MsG0080049014.01.T01 AT1G11950 32.031 128 83 2 198 321 193 320 1.15e-15 82.4
MsG0080049014.01.T01 AT1G11950 37.177 503 237 8 381 854 421 873 6.29e-103 340
MsG0080049014.01.T01 AT1G11950 32.031 128 83 2 198 321 193 320 1.15e-15 82.4
MsG0080049014.01.T01 AT1G62310 37.959 490 227 9 381 838 439 883 2.98e-96 322
MsG0080049014.01.T01 AT1G62310 27.097 155 109 2 171 321 182 336 4.24e-13 73.9
MsG0080049014.01.T01 AT4G00990 35.774 478 243 11 381 798 305 778 1.40e-86 293
MsG0080049014.01.T01 AT4G00990 33.962 159 99 3 168 321 50 207 1.75e-17 88.2
MsG0080049014.01.T01 AT3G07610 32.105 570 305 10 304 848 378 890 1.08e-85 296
MsG0080049014.01.T01 AT3G07610 34.783 138 85 2 198 330 155 292 3.05e-15 80.9
MsG0080049014.01.T01 AT4G00990 35.805 472 239 11 381 792 305 772 2.25e-85 290
MsG0080049014.01.T01 AT4G00990 33.962 159 99 3 168 321 50 207 1.87e-17 87.8
MsG0080049014.01.T01 AT3G07610 30.427 585 317 10 304 848 378 912 2.32e-81 284
MsG0080049014.01.T01 AT3G07610 36.842 114 70 1 198 309 155 268 3.24e-15 80.9
MsG0080049014.01.T01 AT1G11950 35.499 431 199 8 381 782 421 801 5.52e-76 265
MsG0080049014.01.T01 AT1G11950 32.031 128 83 2 198 321 193 320 9.54e-16 82.4
MsG0080049014.01.T01 AT4G21430 26.946 835 497 20 92 859 134 922 5.85e-75 264
MsG0080049014.01.T01 AT3G07610 33.746 323 197 5 304 623 378 686 2.48e-48 184
MsG0080049014.01.T01 AT3G07610 36.842 114 70 1 198 309 155 268 5.77e-15 79.7

Find 9 sgRNAs with CRISPR-Local

Find 672 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAACCATTGCAGTCAAATT+AGG 0.160025 contig609end:-9684 None:intergenic
CTTGGTGGAGAGATTGGATA+TGG 0.368338 contig609end:+9657 MsG0080049014.01.T01:exon
ACCAGACTTGGTGGAGAGAT+TGG 0.370100 contig609end:+9651 MsG0080049014.01.T01:intron
ATTTAGCTTAGTCTCAAATC+AGG 0.402397 contig609end:+9764 MsG0080049014.01.T01:exon
AAACCATTGCAGTCAAATTA+GGG 0.411485 contig609end:-9683 None:intergenic
AGACCCTAATTTGACTGCAA+TGG 0.543203 contig609end:+9680 MsG0080049014.01.T01:exon
TGATTCTCTATGTCTAATGT+CGG 0.585827 contig609end:-9894 None:intergenic
ATTTGAGACTAAGCTAAATG+TGG 0.614905 contig609end:-9760 None:intergenic
ACGAGAAAATGTCTAAGCAG+AGG 0.664650 contig609end:+9715 MsG0080049014.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATATATATATTAATAA+TGG - contig609end:6797-6816 None:intergenic 0.0%
!!! AAATTTATTAAAATTTTAAT+AGG + contig609end:8182-8201 MsG0080049014.01.T01:intron 0.0%
!!! AAATTTATTAAAATTTTAAT+AGG - contig609end:8201-8182 None:intergenic 0.0%
!!! AATTTATTAAAATTTTAATA+GGG + contig609end:8183-8202 MsG0080049014.01.T01:intron 0.0%
!!! AATTTATTAAAATTTTAATA+GGG - contig609end:8202-8183 None:intergenic 0.0%
!!! TTAAAATTTTAATAAATTTT+TGG + contig609end:7457-7476 MsG0080049014.01.T01:intron 0.0%
!!! TTAAAATTTTAATAAATTTT+TGG - contig609end:7476-7457 None:intergenic 0.0%
!! AAAAAAGATGTAAAATAAAT+TGG + contig609end:2144-2163 MsG0080049014.01.T01:intron 10.0%
!! AAATACCAATAATAAATATA+TGG - contig609end:8258-8277 None:intergenic 10.0%
!! AATACCAATAATAAATATAT+GGG - contig609end:8257-8276 None:intergenic 10.0%
!! ATAATGCATTAATATATTTA+GGG + contig609end:7381-7400 MsG0080049014.01.T01:intron 10.0%
!! CAAAAAAATAACAAAAAAAA+TGG - contig609end:7972-7991 None:intergenic 10.0%
!! TATAATGCATTAATATATTT+AGG + contig609end:7380-7399 MsG0080049014.01.T01:intron 10.0%
!! TCATGTAATTTAAATTATAT+AGG + contig609end:6880-6899 MsG0080049014.01.T01:intron 10.0%
!!! ATGTATTTTAAAGTTTATTT+GGG + contig609end:2933-2952 MsG0080049014.01.T01:intron 10.0%
!! AAGTAATATAACCAAAAAAT+TGG - contig609end:5473-5492 None:intergenic 15.0%
!! ACAAAATAATTCTTCTTATT+TGG + contig609end:5788-5807 MsG0080049014.01.T01:intron 15.0%
!! ATATTTAAAAATACATTGGA+AGG + contig609end:5376-5395 MsG0080049014.01.T01:intron 15.0%
!! ATTCATCATTAAATTTAAGT+CGG + contig609end:3471-3490 MsG0080049014.01.T01:intron 15.0%
!! CTGAATATTTAAAAATACAT+TGG + contig609end:5372-5391 MsG0080049014.01.T01:intron 15.0%
!! TTAACCCATATATTTATTAT+TGG + contig609end:8250-8269 MsG0080049014.01.T01:intron 15.0%
!!! ATAATATGAATTTTTTGTGT+AGG + contig609end:8851-8870 MsG0080049014.01.T01:intron 15.0%
!!! GATGTATTTTAAAGTTTATT+TGG + contig609end:2932-2951 MsG0080049014.01.T01:intron 15.0%
!!! GATTTATTTTAAGAAAGAAA+AGG + contig609end:4914-4933 MsG0080049014.01.T01:intron 15.0%
!!! TAATATGAATTTTTTGTGTA+GGG + contig609end:8852-8871 MsG0080049014.01.T01:intron 15.0%
!!! TCAATTAATATTGTTTTTAG+AGG + contig609end:2048-2067 MsG0080049014.01.T01:intron 15.0%
!!! TTTCTTACAGTTTTTTTTAA+TGG + contig609end:5739-5758 MsG0080049014.01.T01:intron 15.0%
!!! TTTTAAATTACTCTACTTTA+TGG + contig609end:3954-3973 MsG0080049014.01.T01:intron 15.0%
!! AAAATTGGTAAAAAATGTAG+AGG + contig609end:3517-3536 MsG0080049014.01.T01:CDS 20.0%
!! AAATGTCCAAAAATAAGTTA+AGG - contig609end:9408-9427 None:intergenic 20.0%
!! AAGCTGTTTATTATATTCAT+AGG + contig609end:4541-4560 MsG0080049014.01.T01:intron 20.0%
!! ACTAAAATACTAATTTACTG+CGG + contig609end:8961-8980 MsG0080049014.01.T01:intron 20.0%
!! ACTAACAAATTTAATACTAC+CGG - contig609end:2026-2045 None:intergenic 20.0%
!! AGTATGAAATTTACATACTT+TGG - contig609end:9503-9522 None:intergenic 20.0%
!! CCAAGATATATATATCTTAT+GGG + contig609end:4247-4266 MsG0080049014.01.T01:CDS 20.0%
!! CCATAAGATATATATATCTT+GGG - contig609end:4249-4268 None:intergenic 20.0%
!! CTAAAATTTCGGAAAATAAT+TGG + contig609end:6549-6568 MsG0080049014.01.T01:intron 20.0%
!! GGAGTTTAATTATTTATGAA+GGG + contig609end:5967-5986 MsG0080049014.01.T01:intron 20.0%
!! GTATGAAATTTACATACTTT+GGG - contig609end:9502-9521 None:intergenic 20.0%
!! TAAATAGTGTGATAATTGTA+TGG - contig609end:9035-9054 None:intergenic 20.0%
!!! AACCATATTTTTGTATAGAT+TGG + contig609end:8989-9008 MsG0080049014.01.T01:intron 20.0%
!!! AATGCAGTTGAAAATTTTAA+GGG + contig609end:2190-2209 MsG0080049014.01.T01:intron 20.0%
!!! AATTGGTTTCAATTTCAAAT+AGG - contig609end:6955-6974 None:intergenic 20.0%
!!! AGTATACAAATTTACTTTTG+CGG - contig609end:7337-7356 None:intergenic 20.0%
!!! ATCGTACACTTTAAAATTTT+AGG - contig609end:4587-4606 None:intergenic 20.0%
!!! GAGTTTTGATTGTTAAAATT+TGG + contig609end:7838-7857 MsG0080049014.01.T01:intron 20.0%
!!! TAAATTTACTGTTTTTCAAC+AGG + contig609end:4995-5014 MsG0080049014.01.T01:intron 20.0%
!!! TAATGCAGTTGAAAATTTTA+AGG + contig609end:2189-2208 MsG0080049014.01.T01:intron 20.0%
!!! TCCATTAATTTTTGTACAAA+AGG - contig609end:5171-5190 None:intergenic 20.0%
!!! TCCTTTTGTACAAAAATTAA+TGG + contig609end:5167-5186 MsG0080049014.01.T01:CDS 20.0%
!!! TCGTACACTTTAAAATTTTA+GGG - contig609end:4586-4605 None:intergenic 20.0%
!!! TGCATTAATTATTTCTTTAC+AGG - contig609end:2176-2195 None:intergenic 20.0%
!!! TTACAGTTTTTTTTAATGGT+GGG + contig609end:5743-5762 MsG0080049014.01.T01:intron 20.0%
!!! TTTAGGGTTAATTATGTTTA+AGG + contig609end:7397-7416 MsG0080049014.01.T01:intron 20.0%
! AAAAATTACATGTTGCACTT+TGG + contig609end:8436-8455 MsG0080049014.01.T01:intron 25.0%
! AAAATACATTGGAAGGAATT+TGG + contig609end:5383-5402 MsG0080049014.01.T01:intron 25.0%
! AAATACATTGGAAGGAATTT+GGG + contig609end:5384-5403 MsG0080049014.01.T01:intron 25.0%
! AAATACTTGCTTAACGATAA+TGG - contig609end:3729-3748 None:intergenic 25.0%
! AACTCTTAAGTCTTAACTAA+AGG + contig609end:8879-8898 MsG0080049014.01.T01:intron 25.0%
! AATACTTGCTTAACGATAAT+GGG - contig609end:3728-3747 None:intergenic 25.0%
! ACAAATCATATGAACAACTT+GGG - contig609end:3281-3300 None:intergenic 25.0%
! ACTCTTAAGTCTTAACTAAA+GGG + contig609end:8880-8899 MsG0080049014.01.T01:intron 25.0%
! AGAATGTTAAAGATGTTAGT+TGG + contig609end:2415-2434 MsG0080049014.01.T01:CDS 25.0%
! AGACATTAATCACATTAGAA+AGG - contig609end:6591-6610 None:intergenic 25.0%
! ATAATTAAACTCCCAAACAA+AGG - contig609end:5960-5979 None:intergenic 25.0%
! ATATGACAGGCATTATTTAA+AGG - contig609end:9357-9376 None:intergenic 25.0%
! ATCACATTACTATGACAAAT+TGG - contig609end:9119-9138 None:intergenic 25.0%
! ATCTAACCACCTATAAAAAT+TGG - contig609end:4714-4733 None:intergenic 25.0%
! ATTGATACAAGTGATAACTT+TGG + contig609end:7027-7046 MsG0080049014.01.T01:intron 25.0%
! ATTTGACAATGTGGAAATAA+TGG + contig609end:3023-3042 MsG0080049014.01.T01:intron 25.0%
! CAAACACATCCAAAAATATT+CGG - contig609end:7236-7255 None:intergenic 25.0%
! CAAATATATGCGGTTTAATT+TGG - contig609end:8478-8497 None:intergenic 25.0%
! CAAATTAAACCGCATATATT+TGG + contig609end:8476-8495 MsG0080049014.01.T01:intron 25.0%
! CCATATACTACAAACAAATA+GGG - contig609end:3184-3203 None:intergenic 25.0%
! CCCAAGATATATATATCTTA+TGG + contig609end:4246-4265 MsG0080049014.01.T01:CDS 25.0%
! CCCATAAGATATATATATCT+TGG - contig609end:4250-4269 None:intergenic 25.0%
! CTCATACATCGTAAAATAAT+AGG - contig609end:8403-8422 None:intergenic 25.0%
! GAAATTCCATTAAGAGAAAA+TGG + contig609end:5278-5297 MsG0080049014.01.T01:CDS 25.0%
! GGGAGTTTAATTATTTATGA+AGG + contig609end:5966-5985 MsG0080049014.01.T01:intron 25.0%
! GTCAATACAATATATATGAC+AGG - contig609end:9370-9389 None:intergenic 25.0%
! TAAGAAATTGTCAACTTTGT+GGG - contig609end:5726-5745 None:intergenic 25.0%
! TAATTAAACTCCCAAACAAA+GGG - contig609end:5959-5978 None:intergenic 25.0%
! TATGAAAGATGATAACAGAA+TGG + contig609end:3820-3839 MsG0080049014.01.T01:CDS 25.0%
! TGTTGTTATGAATTGTTAAG+CGG + contig609end:5626-5645 MsG0080049014.01.T01:intron 25.0%
! TTCCAAATTAACATCAGAAT+CGG - contig609end:1601-1620 None:intergenic 25.0%
! TTCTAAATCAAAAGACAAGA+GGG - contig609end:8750-8769 None:intergenic 25.0%
! TTTAAATATTCAGTCACCTT+TGG - contig609end:5365-5384 None:intergenic 25.0%
! TTTCTAAATCAAAAGACAAG+AGG - contig609end:8751-8770 None:intergenic 25.0%
! TTTCTGGGCAATAAAATTTA+TGG + contig609end:2756-2775 MsG0080049014.01.T01:intron 25.0%
!! AAGGATAAACCTTTAAAAGA+AGG - contig609end:2079-2098 None:intergenic 25.0%
!! ATGCAGTTGAAAATTTTAAG+GGG + contig609end:2191-2210 MsG0080049014.01.T01:intron 25.0%
!! ATGTTTTGCCACAAAAATAA+TGG + contig609end:6403-6422 MsG0080049014.01.T01:intron 25.0%
!! ATTTACACTACTGTTCTTTT+TGG + contig609end:8938-8957 MsG0080049014.01.T01:intron 25.0%
!! GATAAAGAATTTTCTCAAGA+GGG + contig609end:2228-2247 MsG0080049014.01.T01:intron 25.0%
!! TAAATTTTATTGCCCAGAAA+AGG - contig609end:2756-2775 None:intergenic 25.0%
!! TAACTTTCAAAGTACCTTTA+TGG - contig609end:2683-2702 None:intergenic 25.0%
!! TAATGGGAAAATACATTTTC+AGG + contig609end:6420-6439 MsG0080049014.01.T01:intron 25.0%
!! TCAACATCTTACCAATTTTT+GGG + contig609end:7811-7830 MsG0080049014.01.T01:intron 25.0%
!! TGTTATGTTGATGAATTGAA+AGG + contig609end:2300-2319 MsG0080049014.01.T01:intron 25.0%
!! TGTTTTGCCACAAAAATAAT+GGG + contig609end:6404-6423 MsG0080049014.01.T01:intron 25.0%
!! TTGTACAAAAATTAATGGAC+TGG + contig609end:5172-5191 MsG0080049014.01.T01:CDS 25.0%
!! TTTTGATATTTTGTTGCTGA+TGG + contig609end:5494-5513 MsG0080049014.01.T01:intron 25.0%
!! TTTTGTACAAAAGGATGAAT+CGG - contig609end:5162-5181 None:intergenic 25.0%
!! TTTTTCTTATTCAGAGAGAA+TGG + contig609end:1377-1396 MsG0080049014.01.T01:exon 25.0%
!!! AAAAATTAATGGACTGGATT+TGG + contig609end:5178-5197 MsG0080049014.01.T01:CDS 25.0%
!!! AATTATTATTTTTGCCACAC+TGG - contig609end:7609-7628 None:intergenic 25.0%
!!! ACGTGATTTTTATTTTGGAT+CGG + contig609end:8553-8572 MsG0080049014.01.T01:intron 25.0%
!!! ATGTTCTGAGATGAAAAAAT+GGG - contig609end:9590-9609 None:intergenic 25.0%
!!! ATTTTAATAGGGACTAATGT+TGG + contig609end:8194-8213 MsG0080049014.01.T01:intron 25.0%
!!! ATTTTAATAGGGACTAATGT+TGG - contig609end:8213-8194 None:intergenic 25.0%
!!! CAAAAATATTCGGTTTTTTG+CGG - contig609end:7226-7245 None:intergenic 25.0%
!!! CTTACAGTTTTTTTTAATGG+TGG + contig609end:5742-5761 MsG0080049014.01.T01:intron 25.0%
!!! CTTTTTGAAAATTGCTTTGT+AGG + contig609end:2326-2345 MsG0080049014.01.T01:intron 25.0%
!!! GACATTTCTTACCAATTTTT+TGG + contig609end:5459-5478 MsG0080049014.01.T01:intron 25.0%
!!! GTATTTTCCCATTATTTTTG+TGG - contig609end:6414-6433 None:intergenic 25.0%
!!! GTTGAAATTGATGGTTTTTA+CGG + contig609end:3132-3151 MsG0080049014.01.T01:intron 25.0%
!!! TCAAGTCCTTAACTTATTTT+TGG + contig609end:9399-9418 MsG0080049014.01.T01:intron 25.0%
!!! TCTCTAAAATAAGACTCTAT+TGG + contig609end:1971-1990 MsG0080049014.01.T01:intron 25.0%
!!! TTAAGGGGGTTTTATAAAAA+GGG + contig609end:2206-2225 MsG0080049014.01.T01:intron 25.0%
!!! TTATGGTTTTGCTGATATTA+AGG + contig609end:2773-2792 MsG0080049014.01.T01:intron 25.0%
!!! TTATTTTTGGACATTTATGC+AGG + contig609end:9412-9431 MsG0080049014.01.T01:intron 25.0%
!!! TTGAAATTGATGGTTTTTAC+GGG + contig609end:3133-3152 MsG0080049014.01.T01:intron 25.0%
!!! TTTAAGGGGGTTTTATAAAA+AGG + contig609end:2205-2224 MsG0080049014.01.T01:intron 25.0%
AAAAACCTTTCCAAAGCTTT+AGG + contig609end:6231-6250 MsG0080049014.01.T01:intron 30.0%
AAAACTCAAACCCCAAAAAT+TGG - contig609end:7825-7844 None:intergenic 30.0%
AAAATCGCACAATTGAAACT+AGG - contig609end:4618-4637 None:intergenic 30.0%
AAACCATTGCAGTCAAATTA+GGG - contig609end:9686-9705 None:intergenic 30.0%
AAATATTGAAGCTGAAGGAT+TGG + contig609end:4073-4092 MsG0080049014.01.T01:CDS 30.0%
AAATCGCACAATTGAAACTA+GGG - contig609end:4617-4636 None:intergenic 30.0%
AAATTCTGTTCAAATGACCA+CGG - contig609end:6632-6651 None:intergenic 30.0%
AACTTCAAATATAGCACTTC+AGG - contig609end:6016-6035 None:intergenic 30.0%
AATACTATTGTGCCAAATTG+TGG + contig609end:6521-6540 MsG0080049014.01.T01:intron 30.0%
ACACCATAAAAGAAAGTTGA+AGG + contig609end:5579-5598 MsG0080049014.01.T01:CDS 30.0%
ACGTAGTGATAATTCCATAA+AGG + contig609end:2666-2685 MsG0080049014.01.T01:CDS 30.0%
ACTAACTTAGGCATTCATAT+AGG - contig609end:6913-6932 None:intergenic 30.0%
AGAAAGAAAAGGAAAGTAGT+TGG + contig609end:4925-4944 MsG0080049014.01.T01:intron 30.0%
AGAAAGTTGAAGGAAGAATT+TGG + contig609end:5589-5608 MsG0080049014.01.T01:CDS 30.0%
AGATATAGTAGTAGTTGGTT+AGG + contig609end:5650-5669 MsG0080049014.01.T01:intron 30.0%
AGATGATAACAGAATGGTTA+AGG + contig609end:3826-3845 MsG0080049014.01.T01:CDS 30.0%
AGTAGTACTTTACAGAGTTT+GGG - contig609end:4832-4851 None:intergenic 30.0%
AGTCAACTATCACTGTTAAT+TGG - contig609end:6972-6991 None:intergenic 30.0%
ATAATAAATTGAAGCACAGG+AGG + contig609end:7862-7881 MsG0080049014.01.T01:intron 30.0%
ATACTATTGTGCCAAATTGT+GGG + contig609end:6522-6541 MsG0080049014.01.T01:intron 30.0%
ATAGGTGGTTAGATTGTTAT+TGG + contig609end:4720-4739 MsG0080049014.01.T01:intron 30.0%
ATCTTCTGAATTTCATCCAA+TGG - contig609end:2604-2623 None:intergenic 30.0%
ATTTAGCTGCAACATTAAGA+AGG - contig609end:4194-4213 None:intergenic 30.0%
CAACGCTTTCATAAAACAAA+AGG - contig609end:9081-9100 None:intergenic 30.0%
CAACTTCAAAACATTGTTCT+CGG - contig609end:2887-2906 None:intergenic 30.0%
CAATGAAAAACTCAAAAGTG+AGG + contig609end:4792-4811 MsG0080049014.01.T01:intron 30.0%
CACAAATCATATGAACAACT+TGG - contig609end:3282-3301 None:intergenic 30.0%
CATGAAATAAAATGACCATG+TGG - contig609end:4370-4389 None:intergenic 30.0%
CCCTATTTGTTTGTAGTATA+TGG + contig609end:3181-3200 MsG0080049014.01.T01:intron 30.0%
CTAGAAAATGTAGCAGAAAA+AGG - contig609end:4875-4894 None:intergenic 30.0%
CTCTTAAGTCTTAACTAAAG+GGG + contig609end:8881-8900 MsG0080049014.01.T01:intron 30.0%
CTTTCTTAATTCCAGTGATT+AGG - contig609end:1997-2016 None:intergenic 30.0%
GAAATAATGGTTTCTTTCAC+AGG + contig609end:3036-3055 MsG0080049014.01.T01:intron 30.0%
GAACATTTCTTGCTTGAAAA+GGG - contig609end:6685-6704 None:intergenic 30.0%
GACACTTATGTTGAAATTGA+TGG + contig609end:3123-3142 MsG0080049014.01.T01:CDS 30.0%
GAGTGAATATACTGAAGTAA+AGG - contig609end:4162-4181 None:intergenic 30.0%
GCCATATACTACAAACAAAT+AGG - contig609end:3185-3204 None:intergenic 30.0%
GGAAAACTACAAACTAACTT+AGG - contig609end:6925-6944 None:intergenic 30.0%
GGAATAATAAATTGAAGCAC+AGG + contig609end:7859-7878 MsG0080049014.01.T01:intron 30.0%
GGAGTTAAACTAATGTGATA+TGG + contig609end:8800-8819 MsG0080049014.01.T01:intron 30.0%
GGCCAATCTATACAAAAATA+TGG - contig609end:8994-9013 None:intergenic 30.0%
GGTAAAAAATGTAGAGGAAA+TGG + contig609end:3523-3542 MsG0080049014.01.T01:CDS 30.0%
GTAAGAAATTGTCAACTTTG+TGG - contig609end:5727-5746 None:intergenic 30.0%
TAAACCGCATATATTTGGAT+CGG + contig609end:8481-8500 MsG0080049014.01.T01:intron 30.0%
TAGTAGTACTTTACAGAGTT+TGG - contig609end:4833-4852 None:intergenic 30.0%
TAGTTAAGACTTAAGAGTTC+AGG - contig609end:8878-8897 None:intergenic 30.0%
TCAATTTCAAATAGGCTGAA+CGG - contig609end:6947-6966 None:intergenic 30.0%
TCCAAAATAAAAATCACGTG+CGG - contig609end:8552-8571 None:intergenic 30.0%
TCCAAATTAACATCAGAATC+GGG - contig609end:1600-1619 None:intergenic 30.0%
TCGTTAAGCAAGTATTTGAT+AGG + contig609end:3732-3751 MsG0080049014.01.T01:CDS 30.0%
TCTAAATCAAAAGACAAGAG+GGG - contig609end:8749-8768 None:intergenic 30.0%
TGAACATTTCTTGCTTGAAA+AGG - contig609end:6686-6705 None:intergenic 30.0%
TGATTAATGTCTTCCTAAGT+AGG + contig609end:6599-6618 MsG0080049014.01.T01:intron 30.0%
TGATTCTCTATGTCTAATGT+CGG - contig609end:9897-9916 None:intergenic 30.0%
TGGAAACACGTCTATTTATA+GGG + contig609end:8214-8233 MsG0080049014.01.T01:intron 30.0%
TGGTCATTTGAACAGAATTT+GGG + contig609end:6632-6651 MsG0080049014.01.T01:CDS 30.0%
TGTACTAGTATTTGACAATG+TGG + contig609end:3014-3033 MsG0080049014.01.T01:intron 30.0%
TGTTCTGTTTGAAGAGAATT+GGG + contig609end:1830-1849 MsG0080049014.01.T01:CDS 30.0%
TTAGTGAAGATACCTTCTTT+CGG + contig609end:2502-2521 MsG0080049014.01.T01:intron 30.0%
TTCAGGAGATAAGAAATCAA+GGG - contig609end:9183-9202 None:intergenic 30.0%
TTCATGAAAGGATATTCTGA+GGG + contig609end:4024-4043 MsG0080049014.01.T01:CDS 30.0%
TTGGAAACACGTCTATTTAT+AGG + contig609end:8213-8232 MsG0080049014.01.T01:intron 30.0%
TTGTGGGTAGACTAAAATTT+CGG + contig609end:6538-6557 MsG0080049014.01.T01:intron 30.0%
TTTCAGGAGATAAGAAATCA+AGG - contig609end:9184-9203 None:intergenic 30.0%
TTTCTTGCAGCAATTTATGT+AGG + contig609end:3226-3245 MsG0080049014.01.T01:intron 30.0%
TTTGTACAAAAGGATGAATC+GGG - contig609end:5161-5180 None:intergenic 30.0%
! AAGTTTATTCTAGTGCTGAA+GGG + contig609end:5240-5259 MsG0080049014.01.T01:CDS 30.0%
! AGTTTTGCTTCATGTTCATT+AGG - contig609end:9251-9270 None:intergenic 30.0%
! ATTTAGCTTAGTCTCAAATC+AGG + contig609end:9764-9783 MsG0080049014.01.T01:exon 30.0%
! ATTTGAGACTAAGCTAAATG+TGG - contig609end:9763-9782 None:intergenic 30.0%
! CAACATCTTACCAATTTTTG+GGG + contig609end:7812-7831 MsG0080049014.01.T01:intron 30.0%
! CCTCTTGTTTGATTATGTAA+GGG + contig609end:6074-6093 MsG0080049014.01.T01:intron 30.0%
! CGCAAAAAACCGAATATTTT+TGG + contig609end:7224-7243 MsG0080049014.01.T01:intron 30.0%
! CTCAACATCTTACCAATTTT+TGG + contig609end:7810-7829 MsG0080049014.01.T01:intron 30.0%
! CTCCAATTCAACAAACTTTT+GGG + contig609end:7778-7797 MsG0080049014.01.T01:intron 30.0%
! CTGCAACTTCATTATAGTTT+TGG + contig609end:4428-4447 MsG0080049014.01.T01:intron 30.0%
! CTTCCTTCAACTTTCTTTTA+TGG - contig609end:5585-5604 None:intergenic 30.0%
! GAGGTTTATCCTTCTTTTAA+AGG + contig609end:2067-2086 MsG0080049014.01.T01:intron 30.0%
! GGAGAAGATAAAGTGTTTAT+TGG - contig609end:6152-6171 None:intergenic 30.0%
! GGATAAAGAATTTTCTCAAG+AGG + contig609end:2227-2246 MsG0080049014.01.T01:intron 30.0%
! GTAATTTTACTCTGGATTCA+AGG + contig609end:5516-5535 MsG0080049014.01.T01:intron 30.0%
! GTTTTGCTGATATTAAGGTT+CGG + contig609end:2778-2797 MsG0080049014.01.T01:intron 30.0%
! TCCTCTTGTTTGATTATGTA+AGG + contig609end:6073-6092 MsG0080049014.01.T01:intron 30.0%
! TCTCCAATTCAACAAACTTT+TGG + contig609end:7777-7796 MsG0080049014.01.T01:intron 30.0%
! TGTTTAAGGTCCCTATAAAT+AGG + contig609end:7411-7430 MsG0080049014.01.T01:intron 30.0%
!! AAAGTTTGTTGAATTGGAGA+TGG - contig609end:7777-7796 None:intergenic 30.0%
!! AACCCAAAAGTTTGTTGAAT+TGG - contig609end:7783-7802 None:intergenic 30.0%
!! ACAAATTTACTTTTGCGGTT+CGG - contig609end:7332-7351 None:intergenic 30.0%
!! ATATGCGGTTTAATTTGGAT+CGG - contig609end:8473-8492 None:intergenic 30.0%
!! ATTTTAGTCTACCCACAATT+TGG - contig609end:6536-6555 None:intergenic 30.0%
!! GATGTTCTGAGATGAAAAAA+TGG - contig609end:9591-9610 None:intergenic 30.0%
!! GGAATTAAGAAAGTTGATAC+CGG + contig609end:2004-2023 MsG0080049014.01.T01:intron 30.0%
!! TAATTATTGTTTTACCACGC+TGG + contig609end:8044-8063 MsG0080049014.01.T01:intron 30.0%
!! TCAACACTGTAAGTTTTGTA+TGG + contig609end:1928-1947 MsG0080049014.01.T01:intron 30.0%
!! TCGGATTTTCAAGATGAATT+GGG + contig609end:3490-3509 MsG0080049014.01.T01:intron 30.0%
!! TGAAGCAAAACTTCAAGTTT+TGG + contig609end:9259-9278 MsG0080049014.01.T01:CDS 30.0%
!! TGCAGTTGAAAATTTTAAGG+GGG + contig609end:2192-2211 MsG0080049014.01.T01:intron 30.0%
!! TGTTATGTTGTGCTTTTTAC+AGG + contig609end:2566-2585 MsG0080049014.01.T01:intron 30.0%
!! TTATTTGTTGTCGAGATCTT+CGG + contig609end:3304-3323 MsG0080049014.01.T01:CDS 30.0%
!! TTTTCAAGCAAGAAATGTTC+AGG + contig609end:6685-6704 MsG0080049014.01.T01:CDS 30.0%
!!! AACTTTGGTAGTTGTTTTTC+TGG + contig609end:7042-7061 MsG0080049014.01.T01:intron 30.0%
!!! AAGAGTTTTGAGCATTTTGA+TGG - contig609end:6279-6298 None:intergenic 30.0%
!!! ACTTTGGTAGTTGTTTTTCT+GGG + contig609end:7043-7062 MsG0080049014.01.T01:intron 30.0%
!!! AGAGTTTTGAGCATTTTGAT+GGG - contig609end:6278-6297 None:intergenic 30.0%
!!! CGAATATTTTTGGATGTGTT+TGG + contig609end:7234-7253 MsG0080049014.01.T01:intron 30.0%
!!! GTTTAATTTGGATCGGTTTT+TGG - contig609end:8466-8485 None:intergenic 30.0%
!!! TTGTTACCATGTTTTTTTCG+AGG + contig609end:6108-6127 MsG0080049014.01.T01:intron 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG - contig609end:7182-7201 None:intergenic 30.0%
AAAATAGCTCCACCATAAAG+AGG - contig609end:5550-5569 None:intergenic 35.0%
AAAGATTCGACTATGGATCA+AGG + contig609end:5212-5231 MsG0080049014.01.T01:CDS 35.0%
AAAGTACAGTCAAATGCCAA+CGG - contig609end:2980-2999 None:intergenic 35.0%
AACAACATCGATGAGAATGT+AGG + contig609end:1417-1436 MsG0080049014.01.T01:CDS 35.0%
AAGATTCGACTATGGATCAA+GGG + contig609end:5213-5232 MsG0080049014.01.T01:CDS 35.0%
AATAAAAATCACGTGCGGTT+AGG - contig609end:8547-8566 None:intergenic 35.0%
AATGATGCAGAAAACTTCCA+AGG + contig609end:5079-5098 MsG0080049014.01.T01:CDS 35.0%
AATGTAATGCTTCTCGCAAA+CGG - contig609end:1520-1539 None:intergenic 35.0%
AATGTAGAGGAAATGGTTAG+TGG + contig609end:3530-3549 MsG0080049014.01.T01:CDS 35.0%
ACTTCTATGAGGTCTAATTG+AGG + contig609end:6451-6470 MsG0080049014.01.T01:intron 35.0%
AGATGGATCTAGTGATTTCT+AGG - contig609end:7746-7765 None:intergenic 35.0%
AGATGGGGTAACATTAACTT+TGG - contig609end:7089-7108 None:intergenic 35.0%
AGGCAAAAAGAACTTCTATG+AGG + contig609end:6440-6459 MsG0080049014.01.T01:intron 35.0%
AGGGACTACTAAATGCAAAA+GGG - contig609end:4658-4677 None:intergenic 35.0%
ATAGGTCATCAATTTCAAGC+TGG + contig609end:3750-3769 MsG0080049014.01.T01:CDS 35.0%
ATATCTTGGGTTAATGAGGA+TGG - contig609end:4346-4365 None:intergenic 35.0%
CAAATATAGCACTTCAGGAA+TGG - contig609end:6011-6030 None:intergenic 35.0%
CAATTTCAAATAGGCTGAAC+GGG - contig609end:6946-6965 None:intergenic 35.0%
CCCTTACATAATCAAACAAG+AGG - contig609end:6077-6096 None:intergenic 35.0%
CGAAAAAATCAACCGAAAGA+AGG - contig609end:2517-2536 None:intergenic 35.0%
CTCTTACCTCGAAAAAAACA+TGG - contig609end:6117-6136 None:intergenic 35.0%
CTGAAGAACTCAAAACTGAT+GGG + contig609end:3666-3685 MsG0080049014.01.T01:CDS 35.0%
CTGTTCTGTTTGAAGAGAAT+TGG + contig609end:1829-1848 MsG0080049014.01.T01:CDS 35.0%
CTTCACTTGAATGAACCAAA+AGG - contig609end:5025-5044 None:intergenic 35.0%
CTTCATGTTCATTAGGTAGA+CGG - contig609end:9244-9263 None:intergenic 35.0%
GAAAAACTCAAAAGTGAGGA+GGG + contig609end:4796-4815 MsG0080049014.01.T01:intron 35.0%
GAAACCATTGCAGTCAAATT+AGG - contig609end:9687-9706 None:intergenic 35.0%
GAAGATCTCGACAACAAATA+AGG - contig609end:3305-3324 None:intergenic 35.0%
GAATTGAACTAAACCCTAGA+GGG - contig609end:1331-1350 None:intergenic 35.0%
GAGCTTAATCAGTTCATGAA+AGG + contig609end:4012-4031 MsG0080049014.01.T01:CDS 35.0%
GAGGTCACAGTTTAAGTATT+TGG + contig609end:8649-8668 MsG0080049014.01.T01:intron 35.0%
GATGGGGTAACATTAACTTT+GGG - contig609end:7088-7107 None:intergenic 35.0%
GCTTTGTAGGAATGTTCTAA+TGG + contig609end:2339-2358 MsG0080049014.01.T01:intron 35.0%
GGAAATAATGTTTCCAATCC+TGG + contig609end:1774-1793 MsG0080049014.01.T01:CDS 35.0%
GGAATGTTCTAATGGAACAT+CGG + contig609end:2347-2366 MsG0080049014.01.T01:intron 35.0%
GGTCATTTGAACAGAATTTG+GGG + contig609end:6633-6652 MsG0080049014.01.T01:CDS 35.0%
GTCATTTGAACAGAATTTGG+GGG + contig609end:6634-6653 MsG0080049014.01.T01:CDS 35.0%
GTGGTCATTTGAACAGAATT+TGG + contig609end:6631-6650 MsG0080049014.01.T01:CDS 35.0%
GTTCATGAAAGGATATTCTG+AGG + contig609end:4023-4042 MsG0080049014.01.T01:CDS 35.0%
TAACATTCTTCCTACACTGA+TGG - contig609end:2404-2423 None:intergenic 35.0%
TAATCAACGAGTAAAGACAG+AGG - contig609end:3932-3951 None:intergenic 35.0%
TACTATGACAAATTGGACAC+AGG - contig609end:9112-9131 None:intergenic 35.0%
TACTGTAACTTATCCAGTAC+AGG - contig609end:2816-2835 None:intergenic 35.0%
TAGGTCATCAATTTCAAGCT+GGG + contig609end:3751-3770 MsG0080049014.01.T01:CDS 35.0%
TATGAAGGGAAGTAAATACG+AGG + contig609end:5981-6000 MsG0080049014.01.T01:intron 35.0%
TATGGGATTACTGATGAACT+TGG + contig609end:4264-4283 MsG0080049014.01.T01:CDS 35.0%
TATTAAGCAAGTTTCCTCTC+TGG + contig609end:3390-3409 MsG0080049014.01.T01:intron 35.0%
TCAGTATATTCACTCCAAGT+GGG + contig609end:4167-4186 MsG0080049014.01.T01:CDS 35.0%
TCATAAACTATCTCGCTTGA+AGG - contig609end:2098-2117 None:intergenic 35.0%
TCATGAAAGGATATTCTGAG+GGG + contig609end:4025-4044 MsG0080049014.01.T01:CDS 35.0%
TCCTTCAGCTTCAATATTTG+TGG - contig609end:4072-4091 None:intergenic 35.0%
TCTGAAGAACTCAAAACTGA+TGG + contig609end:3665-3684 MsG0080049014.01.T01:CDS 35.0%
TGAAAAACTCAAAAGTGAGG+AGG + contig609end:4795-4814 MsG0080049014.01.T01:intron 35.0%
TGAATTGAACTAAACCCTAG+AGG - contig609end:1332-1351 None:intergenic 35.0%
TGCTGATAAATTCAGGTCTT+TGG - contig609end:4134-4153 None:intergenic 35.0%
TGGAAACACGCCTATTTATA+GGG - contig609end:7424-7443 None:intergenic 35.0%
TGGAAGAACTTTACAATTGC+AGG + contig609end:7115-7134 MsG0080049014.01.T01:intron 35.0%
TGGAATACTTCCATTGTCAT+TGG - contig609end:3420-3439 None:intergenic 35.0%
TGGGAAGAAGTTGTTTGATA+AGG + contig609end:1698-1717 MsG0080049014.01.T01:CDS 35.0%
TGGTCAGTTGTAATGAATAC+AGG - contig609end:9015-9034 None:intergenic 35.0%
TGTGATATGGACAAAGCTTA+AGG + contig609end:8813-8832 MsG0080049014.01.T01:intron 35.0%
TTAGTTTAACTCCCCTCTAA+TGG - contig609end:8793-8812 None:intergenic 35.0%
TTATTAACCGCAGTTGAAAG+CGG - contig609end:1648-1667 None:intergenic 35.0%
TTCAAGTGAAGTAAAGCTGA+AGG + contig609end:5034-5053 MsG0080049014.01.T01:CDS 35.0%
TTCAGTATATTCACTCCAAG+TGG + contig609end:4166-4185 MsG0080049014.01.T01:CDS 35.0%
TTCGTTGAAGATGAACATGA+GGG - contig609end:7716-7735 None:intergenic 35.0%
TTGCCAATATTCTCAAAGAG+AGG + contig609end:3610-3629 MsG0080049014.01.T01:CDS 35.0%
TTGGAAACACGCCTATTTAT+AGG - contig609end:7425-7444 None:intergenic 35.0%
TTGGGTCAAAATACACATGA+GGG - contig609end:4677-4696 None:intergenic 35.0%
TTTCGTTGAAGATGAACATG+AGG - contig609end:7717-7736 None:intergenic 35.0%
TTTGAAAGTAGTTCGAGGAA+CGG - contig609end:6744-6763 None:intergenic 35.0%
TTTGGAAAAACCGCTATGAT+CGG + contig609end:7264-7283 MsG0080049014.01.T01:intron 35.0%
TTTGGGTCAAAATACACATG+AGG - contig609end:4678-4697 None:intergenic 35.0%
! ACATGCTTTTCCTGTATTAC+TGG + contig609end:6329-6348 MsG0080049014.01.T01:intron 35.0%
! ACATGGCCAATTTTTATAGG+TGG + contig609end:4705-4724 MsG0080049014.01.T01:intron 35.0%
! ACGTCTCCATTTTCTCTTAA+TGG - contig609end:5287-5306 None:intergenic 35.0%
! ATTCATGCTGACTAGACAAA+CGG + contig609end:7524-7543 MsG0080049014.01.T01:intron 35.0%
! CATGCTTTTCCTGTATTACT+GGG + contig609end:6330-6349 MsG0080049014.01.T01:intron 35.0%
! CATTAACTTTGGGTTTGTGA+AGG - contig609end:7078-7097 None:intergenic 35.0%
! CTCAAGAGGGTCTTATATTT+AGG + contig609end:2241-2260 MsG0080049014.01.T01:intron 35.0%
! CTGACATGGCCAATTTTTAT+AGG + contig609end:4702-4721 MsG0080049014.01.T01:intron 35.0%
! GAAGTTTATTCTAGTGCTGA+AGG + contig609end:5239-5258 MsG0080049014.01.T01:CDS 35.0%
! GAGGGTCTTATATTTAGGAA+CGG + contig609end:2246-2265 MsG0080049014.01.T01:intron 35.0%
! GCATATGCAATTCCTTTTCT+GGG + contig609end:2741-2760 MsG0080049014.01.T01:intron 35.0%
! GTAGTGGTTTGTAATGGAAT+GGG + contig609end:2271-2290 MsG0080049014.01.T01:intron 35.0%
! GTTTTTGCCGTTAGCAAAAT+TGG + contig609end:7488-7507 MsG0080049014.01.T01:intron 35.0%
! GTTTTTGCCGTTAGCAAAAT+TGG - contig609end:7507-7488 None:intergenic 35.0%
! TAGCCTCTCTTTGAGAATAT+TGG - contig609end:3616-3635 None:intergenic 35.0%
! TCAGCATGAATTTTACAGCA+GGG - contig609end:7515-7534 None:intergenic 35.0%
! TGCATATGCAATTCCTTTTC+TGG + contig609end:2740-2759 MsG0080049014.01.T01:intron 35.0%
! TGCTGATGGTAATTTTACTC+TGG + contig609end:5508-5527 MsG0080049014.01.T01:intron 35.0%
! TTTAGAACACACTGGAAAAC+TGG + contig609end:3698-3717 MsG0080049014.01.T01:CDS 35.0%
! TTTCTTGAGATTAGCTCTCA+TGG - contig609end:1571-1590 None:intergenic 35.0%
! TTTGCGGTTTTCGGTTTTTT+TGG - contig609end:7210-7229 None:intergenic 35.0%
! TTTTCAACAGGTGTACCTTT+TGG + contig609end:5007-5026 MsG0080049014.01.T01:intron 35.0%
! TTTTGGACATTTATGCAGGT+GGG + contig609end:9416-9435 MsG0080049014.01.T01:intron 35.0%
! TTTTTGGACATTTATGCAGG+TGG + contig609end:9415-9434 MsG0080049014.01.T01:intron 35.0%
!! AAAGGTTTTTGAAGACAGGA+AGG - contig609end:6221-6240 None:intergenic 35.0%
!! AAGGTTTTTGAAGACAGGAA+GGG - contig609end:6220-6239 None:intergenic 35.0%
!! ACCGCACGTGATTTTTATTT+TGG + contig609end:8548-8567 MsG0080049014.01.T01:intron 35.0%
!! AGCAAAACTTCAAGTTTTGG+AGG + contig609end:9262-9281 MsG0080049014.01.T01:CDS 35.0%
!! GATGTGTTTGGATGTTGTTT+TGG + contig609end:7246-7265 MsG0080049014.01.T01:intron 35.0%
!! GTCGGATTTTCAAGATGAAT+TGG + contig609end:3489-3508 MsG0080049014.01.T01:intron 35.0%
!! GTTTAAGTATTTGGCTTGAC+TGG + contig609end:8658-8677 MsG0080049014.01.T01:intron 35.0%
!! TATTTGTTGTCGAGATCTTC+GGG + contig609end:3305-3324 MsG0080049014.01.T01:CDS 35.0%
!! TTGGAAAGGTTTTTGAAGAC+AGG - contig609end:6225-6244 None:intergenic 35.0%
!!! ATCGGTTTGCGGTTTTATTT+TGG - contig609end:7187-7206 None:intergenic 35.0%
!!! ATTCGGTTTTTTGCGGTTTT+CGG - contig609end:7219-7238 None:intergenic 35.0%
!!! ATTTGAAGTTTTGAGCCAAG+AGG + contig609end:6026-6045 MsG0080049014.01.T01:intron 35.0%
!!! GATTGTTGTTTTACCAGACT+TGG + contig609end:9639-9658 MsG0080049014.01.T01:intron 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG - contig609end:7177-7196 None:intergenic 35.0%
!!! GGTTTTCGGTTTTTTTGGAT+CGG - contig609end:7205-7224 None:intergenic 35.0%
!!! GTTTTGAGTTCTTCAGATGT+TGG - contig609end:3662-3681 None:intergenic 35.0%
AAAAACCGCTATGATCGGAT+CGG + contig609end:7269-7288 MsG0080049014.01.T01:intron 40.0%
AAAAATGGGACAGAACACAG+AGG - contig609end:9576-9595 None:intergenic 40.0%
AACACATCCTGGAGTTCTTT+GGG + contig609end:5316-5335 MsG0080049014.01.T01:CDS 40.0%
AAGAACGTAGGTACAACTAG+GGG - contig609end:8622-8641 None:intergenic 40.0%
AAGGTTACATGGCCTCTTTA+TGG + contig609end:5535-5554 MsG0080049014.01.T01:intron 40.0%
AAGTTCTTCCAACAGACAGA+TGG - contig609end:7106-7125 None:intergenic 40.0%
AATCAAAAGACAAGAGGGGT+AGG - contig609end:8745-8764 None:intergenic 40.0%
AATGACCATGTGGCATATCT+TGG - contig609end:4360-4379 None:intergenic 40.0%
AATGCAAAAGGGGGTAAAAG+TGG - contig609end:4647-4666 None:intergenic 40.0%
AATGTCTTCCTAAGTAGGAG+TGG + contig609end:6604-6623 MsG0080049014.01.T01:intron 40.0%
AATGTTTCCAATCCTGGTGA+TGG + contig609end:1780-1799 MsG0080049014.01.T01:CDS 40.0%
ACAAGAACGTAGGTACAACT+AGG - contig609end:8624-8643 None:intergenic 40.0%
ACAATTGCAGGTTAAGAGCT+TGG + contig609end:7127-7146 MsG0080049014.01.T01:intron 40.0%
ACCTACGTTCTTGTGTATTG+AGG + contig609end:8630-8649 MsG0080049014.01.T01:intron 40.0%
ACCTCAATACACAAGAACGT+AGG - contig609end:8634-8653 None:intergenic 40.0%
ACGAGAAAATGTCTAAGCAG+AGG + contig609end:9715-9734 MsG0080049014.01.T01:exon 40.0%
ACTAAAGGGGTCAACTCTTT+AGG + contig609end:8894-8913 MsG0080049014.01.T01:intron 40.0%
ACTATAAGCTCCCACCATAT+AGG + contig609end:5811-5830 MsG0080049014.01.T01:intron 40.0%
ACTCTGGATTCAAGGTTACA+TGG + contig609end:5524-5543 MsG0080049014.01.T01:intron 40.0%
AGAAATTCTTCAGATGCACG+AGG - contig609end:4105-4124 None:intergenic 40.0%
AGACCAGAAAGATTCGACTA+TGG + contig609end:5205-5224 MsG0080049014.01.T01:CDS 40.0%
AGACCCATCTAAGCAATCTA+GGG - contig609end:3852-3871 None:intergenic 40.0%
AGACCCTAATTTGACTGCAA+TGG + contig609end:9680-9699 MsG0080049014.01.T01:exon 40.0%
AGAGAAAAATCGCACGCAAA+TGG - contig609end:9334-9353 None:intergenic 40.0%
AGATTCGACTATGGATCAAG+GGG + contig609end:5214-5233 MsG0080049014.01.T01:CDS 40.0%
AGTTCTTCCAACAGACAGAT+GGG - contig609end:7105-7124 None:intergenic 40.0%
ATAGTAGTAGTTGGTTAGGC+TGG + contig609end:5654-5673 MsG0080049014.01.T01:intron 40.0%
ATATTTAGGAACGGAGGTAG+TGG + contig609end:2255-2274 MsG0080049014.01.T01:intron 40.0%
ATATTTGGATCGGATCGGTT+CGG + contig609end:8491-8510 MsG0080049014.01.T01:intron 40.0%
ATCAAACAACTTCTTCCCAG+AGG - contig609end:1697-1716 None:intergenic 40.0%
ATCCTCTCCTATCACACTTA+AGG - contig609end:2443-2462 None:intergenic 40.0%
ATGACCATGTGGCATATCTT+GGG - contig609end:4359-4378 None:intergenic 40.0%
ATGCAAAAGGGGGTAAAAGT+GGG - contig609end:4646-4665 None:intergenic 40.0%
ATGCATCAACCCAGTAATAC+AGG - contig609end:6342-6361 None:intergenic 40.0%
ATTACTGATGAACTTGGCAG+AGG + contig609end:4270-4289 MsG0080049014.01.T01:CDS 40.0%
ATTCTTCTCAAGAAACTGGC+AGG + contig609end:2370-2389 MsG0080049014.01.T01:CDS 40.0%
ATTTCAGTCCACTGTTCAGT+TGG + contig609end:9157-9176 MsG0080049014.01.T01:intron 40.0%
CAAGAACGTAGGTACAACTA+GGG - contig609end:8623-8642 None:intergenic 40.0%
CACAATAGGTCCTATATGGT+GGG - contig609end:5824-5843 None:intergenic 40.0%
CAGGTATTCTGACATTCCAT+TGG + contig609end:2585-2604 MsG0080049014.01.T01:intron 40.0%
CAGTATATTCACTCCAAGTG+GGG + contig609end:4168-4187 MsG0080049014.01.T01:CDS 40.0%
CAGTTTCGTTATACTCCTGA+GGG + contig609end:1732-1751 MsG0080049014.01.T01:CDS 40.0%
CATCAATTAATGAGTCCACG+TGG - contig609end:7579-7598 None:intergenic 40.0%
CGATCCGATCCAAATATATG+CGG - contig609end:8488-8507 None:intergenic 40.0%
CGCATATATTTGGATCGGAT+CGG + contig609end:8486-8505 MsG0080049014.01.T01:intron 40.0%
CGTCGATGATAATCAGTGAT+AGG - contig609end:3255-3274 None:intergenic 40.0%
CGTGGACTCATTAATTGATG+TGG + contig609end:7579-7598 MsG0080049014.01.T01:intron 40.0%
CTCGAACTACTTTCAAAGGA+TGG + contig609end:6747-6766 MsG0080049014.01.T01:intron 40.0%
CTCGCTCTTGAACATATATC+TGG - contig609end:5134-5153 None:intergenic 40.0%
CTTCAAAACATTGTTCTCGG+TGG - contig609end:2884-2903 None:intergenic 40.0%
CTTTATACGTGGCGTCTATA+TGG + contig609end:8097-8116 MsG0080049014.01.T01:intron 40.0%
GAAAACTTCCAAGGAATCTG+AGG + contig609end:5088-5107 MsG0080049014.01.T01:CDS 40.0%
GAACTCAAAACTGATGGGAT+TGG + contig609end:3671-3690 MsG0080049014.01.T01:CDS 40.0%
GAACTTGAAAAGAAGTTGCG+TGG + contig609end:2906-2925 MsG0080049014.01.T01:CDS 40.0%
GAAGCTATATTTGTTCCTGC+TGG + contig609end:6656-6675 MsG0080049014.01.T01:CDS 40.0%
GAGGGACTACTAAATGCAAA+AGG - contig609end:4659-4678 None:intergenic 40.0%
GATATGGACAAAGCTTAAGG+AGG + contig609end:8816-8835 MsG0080049014.01.T01:intron 40.0%
GATCCATAGTCGAATCTTTC+TGG - contig609end:5211-5230 None:intergenic 40.0%
GATGAATTGGGTCGCAAAAT+TGG + contig609end:3502-3521 MsG0080049014.01.T01:intron 40.0%
GCCACAAATATTGAAGCTGA+AGG + contig609end:4068-4087 MsG0080049014.01.T01:CDS 40.0%
GCCCGATTCTGATGTTAATT+TGG + contig609end:1596-1615 MsG0080049014.01.T01:CDS 40.0%
GCGGTAGATATAGTAGTAGT+TGG + contig609end:5645-5664 MsG0080049014.01.T01:intron 40.0%
GGACTACTAAATGCAAAAGG+GGG - contig609end:4656-4675 None:intergenic 40.0%
GGCGTATTCTTGAAAATGGT+TGG + contig609end:4046-4065 MsG0080049014.01.T01:CDS 40.0%
GGGACTACTAAATGCAAAAG+GGG - contig609end:4657-4676 None:intergenic 40.0%
GTGATAGCTGCATATCAACA+TGG + contig609end:2466-2485 MsG0080049014.01.T01:CDS 40.0%
GTGCTGAAATAGATCTTCCA+AGG + contig609end:3058-3077 MsG0080049014.01.T01:CDS 40.0%
GTTCCACAATAGGTCCTATA+TGG - contig609end:5828-5847 None:intergenic 40.0%
GTTCCTCGAACTACTTTCAA+AGG + contig609end:6743-6762 MsG0080049014.01.T01:intron 40.0%
TAACACATCCTGGAGTTCTT+TGG + contig609end:5315-5334 MsG0080049014.01.T01:CDS 40.0%
TACTCCTTGCAGAATGATGT+AGG + contig609end:4222-4241 MsG0080049014.01.T01:CDS 40.0%
TCAGTTTCGTTATACTCCTG+AGG + contig609end:1731-1750 MsG0080049014.01.T01:CDS 40.0%
TCATTCTGCAAGGAGTAATG+AGG - contig609end:4219-4238 None:intergenic 40.0%
TCGGATTCTTCTCAAGAAAC+TGG + contig609end:2366-2385 MsG0080049014.01.T01:CDS 40.0%
TCTGCATTCAACTTTGTCCT+TGG - contig609end:3078-3097 None:intergenic 40.0%
TGAACGTGCGCATAATCAAA+TGG - contig609end:2714-2733 None:intergenic 40.0%
TGGCATATCTTGGGTTAATG+AGG - contig609end:4350-4369 None:intergenic 40.0%
TTAACCCAAGATATGCCACA+TGG + contig609end:4352-4371 MsG0080049014.01.T01:intron 40.0%
TTACGTTGCAAGAGATCAGA+CGG + contig609end:1453-1472 MsG0080049014.01.T01:CDS 40.0%
TTCTTATCTCCTGAAAGCCT+GGG + contig609end:9188-9207 MsG0080049014.01.T01:CDS 40.0%
TTGAAAGTAGTTCGAGGAAC+GGG - contig609end:6743-6762 None:intergenic 40.0%
TTGACCCAAAAATGCTGACA+TGG + contig609end:4688-4707 MsG0080049014.01.T01:intron 40.0%
TTGCTAACGGCAAAAACGTT+GGG + contig609end:8153-8172 MsG0080049014.01.T01:intron 40.0%
TTGCTAACGGCAAAAACGTT+GGG - contig609end:8172-8153 None:intergenic 40.0%
TTTCTTATCTCCTGAAAGCC+TGG + contig609end:9187-9206 MsG0080049014.01.T01:CDS 40.0%
TTTGCTAACGGCAAAAACGT+TGG + contig609end:8152-8171 MsG0080049014.01.T01:intron 40.0%
TTTGCTAACGGCAAAAACGT+TGG - contig609end:8171-8152 None:intergenic 40.0%
TTTGGACATTTATGCAGGTG+GGG + contig609end:9417-9436 MsG0080049014.01.T01:intron 40.0%
! AGAATTCGCTGCTCTTTTCT+TGG - contig609end:1547-1566 None:intergenic 40.0%
! ATTGGCCATGTCAGCATTTT+TGG - contig609end:4696-4715 None:intergenic 40.0%
! CAGGAAAAGCATGTGATGAA+TGG - contig609end:6323-6342 None:intergenic 40.0%
! CATAGGCTTAATCGCACTTT+TGG + contig609end:4558-4577 MsG0080049014.01.T01:intron 40.0%
! CATCCTTTGAAAGTAGTTCG+AGG - contig609end:6749-6768 None:intergenic 40.0%
! GGTAGTGGTTTGTAATGGAA+TGG + contig609end:2270-2289 MsG0080049014.01.T01:intron 40.0%
! GGTCTTATATTTAGGAACGG+AGG + contig609end:2249-2268 MsG0080049014.01.T01:intron 40.0%
! GTCAGCATGAATTTTACAGC+AGG - contig609end:7516-7535 None:intergenic 40.0%
! GTTTTTGCATGCTCAGTTTG+AGG - contig609end:3357-3376 None:intergenic 40.0%
! TGGTTAGCTAACTACTACCT+CGG + contig609end:1948-1967 MsG0080049014.01.T01:intron 40.0%
! TGTATAGTGTCTTGCCCTTT+TGG + contig609end:5689-5708 MsG0080049014.01.T01:intron 40.0%
! TTCTAGTGCTGAAGGGAATT+TGG + contig609end:5247-5266 MsG0080049014.01.T01:CDS 40.0%
! TTGGCATGTTTAGAACACAC+TGG + contig609end:3690-3709 MsG0080049014.01.T01:CDS 40.0%
! TTGGCCATGTCAGCATTTTT+GGG - contig609end:4695-4714 None:intergenic 40.0%
!! AAGTCTGAGAGCATTCAATC+CGG - contig609end:3591-3610 None:intergenic 40.0%
!! AGGTTTTTGAAGACAGGAAG+GGG - contig609end:6219-6238 None:intergenic 40.0%
!! AGTGACCTAAAGCTTTGGAA+AGG - contig609end:6239-6258 None:intergenic 40.0%
!! GGCAGTTTGCTGATAAATTC+AGG - contig609end:4141-4160 None:intergenic 40.0%
!! TTAATGGTGGGCAACAACAA+TGG + contig609end:5755-5774 MsG0080049014.01.T01:intron 40.0%
!! TTCTCGCAAACGGTTTTATC+TGG - contig609end:1510-1529 None:intergenic 40.0%
!! TTCTTTGGGATGTCTTTCGT+CGG + contig609end:5330-5349 MsG0080049014.01.T01:CDS 40.0%
!!! AAGTTTTGAGCCAAGAGGAA+GGG + contig609end:6031-6050 MsG0080049014.01.T01:intron 40.0%
!!! CATGCACTTTTGAGTTTGAG+TGG + contig609end:4386-4405 MsG0080049014.01.T01:intron 40.0%
!!! GAGTCTTATTTTAGAGACCG+AGG - contig609end:1968-1987 None:intergenic 40.0%
!!! GGTTTTTTTGGATCGGTTTG+CGG - contig609end:7198-7217 None:intergenic 40.0%
!!! TGTTGTTTTACCAGACTTGG+TGG + contig609end:9642-9661 MsG0080049014.01.T01:intron 40.0%
!!! TTGGTAGTTGTTTTTCTGGG+TGG + contig609end:7046-7065 MsG0080049014.01.T01:intron 40.0%
!!! TTTACTTTTGCGGTTCGGTT+TGG - contig609end:7327-7346 None:intergenic 40.0%
AAACCTGCCTTTGCCATTAG+AGG + contig609end:8777-8796 MsG0080049014.01.T01:intron 45.0%
AAATCACGTGCGGTTAGGTT+CGG - contig609end:8542-8561 None:intergenic 45.0%
AAATTGAAGCACAGGAGGAG+TGG + contig609end:7867-7886 MsG0080049014.01.T01:intron 45.0%
AACAGAACAGCATCCTCATC+AGG - contig609end:1819-1838 None:intergenic 45.0%
AACATTAAGAAGGCCCCACT+TGG - contig609end:4184-4203 None:intergenic 45.0%
AACCTGCCTTTGCCATTAGA+GGG + contig609end:8778-8797 MsG0080049014.01.T01:intron 45.0%
AAGACATCCCAAAGAACTCC+AGG - contig609end:5326-5345 None:intergenic 45.0%
AAGAGCTTGGAGTTGTACCT+AGG + contig609end:7140-7159 MsG0080049014.01.T01:intron 45.0%
AAGATATGTCCTGCATGTCG+TGG + contig609end:2619-2638 MsG0080049014.01.T01:CDS 45.0%
AAGGCCCTAGATTGCTTAGA+TGG + contig609end:3845-3864 MsG0080049014.01.T01:CDS 45.0%
AAGGGAGTGACCTAAAGCTT+TGG - contig609end:6244-6263 None:intergenic 45.0%
AATGATTCGCAGCATGCTTC+TGG + contig609end:1858-1877 MsG0080049014.01.T01:CDS 45.0%
ACAACCACCATACTCCTTAG+GGG - contig609end:3447-3466 None:intergenic 45.0%
AGAGCTTGGAGTTGTACCTA+GGG + contig609end:7141-7160 MsG0080049014.01.T01:intron 45.0%
AGATTGCTTAGATGGGTCTG+AGG + contig609end:3853-3872 MsG0080049014.01.T01:CDS 45.0%
AGGCCCTAGATTGCTTAGAT+GGG + contig609end:3846-3865 MsG0080049014.01.T01:CDS 45.0%
AGGGGTAGGTGCATGTAATT+TGG - contig609end:8731-8750 None:intergenic 45.0%
ATCCCTCTCCATATGACCAA+CGG - contig609end:3779-3798 None:intergenic 45.0%
ATCGTTCTTCCTCTTCCTCT+GGG + contig609end:1679-1698 MsG0080049014.01.T01:CDS 45.0%
ATGTTACCCCATCTGTCTGT+TGG + contig609end:7095-7114 MsG0080049014.01.T01:intron 45.0%
CACAACCACCATACTCCTTA+GGG - contig609end:3448-3467 None:intergenic 45.0%
CACATCTGCAGATCTCTTGT+TGG + contig609end:3878-3897 MsG0080049014.01.T01:intron 45.0%
CAGACCCATCTAAGCAATCT+AGG - contig609end:3853-3872 None:intergenic 45.0%
CATAACACGCAGTCATCATC+AGG - contig609end:2553-2572 None:intergenic 45.0%
CCAAACAAAGGGAGTTGAAG+GGG - contig609end:5948-5967 None:intergenic 45.0%
CCACAATAGGTCCTATATGG+TGG - contig609end:5825-5844 None:intergenic 45.0%
CCACCATATAGGACCTATTG+TGG + contig609end:5822-5841 MsG0080049014.01.T01:intron 45.0%
CCACTTCAATATGCGTGACA+TGG + contig609end:4311-4330 MsG0080049014.01.T01:CDS 45.0%
CCATGTCACGCATATTGAAG+TGG - contig609end:4314-4333 None:intergenic 45.0%
CCATGTGACTAAACGATCAC+AGG - contig609end:5892-5911 None:intergenic 45.0%
CCCAAACAAAGGGAGTTGAA+GGG - contig609end:5949-5968 None:intergenic 45.0%
CCTGTGATCGTTTAGTCACA+TGG + contig609end:5889-5908 MsG0080049014.01.T01:intron 45.0%
CTCTTGCAACGTAAATCGTC+TGG - contig609end:1447-1466 None:intergenic 45.0%
CTGAGGCGAAAGAATCTCAT+GGG + contig609end:5105-5124 MsG0080049014.01.T01:CDS 45.0%
CTTGGTGGAGAGATTGGATA+TGG + contig609end:9657-9676 MsG0080049014.01.T01:exon 45.0%
GAAATCCGATCCGATCATAG+CGG - contig609end:7277-7296 None:intergenic 45.0%
GATACGTGAGATACCTGTAC+TGG + contig609end:2800-2819 MsG0080049014.01.T01:CDS 45.0%
GCAGTCATCATCAGGAAGTA+AGG - contig609end:2545-2564 None:intergenic 45.0%
GCTATGATCGGATCGGATTT+CGG + contig609end:7276-7295 MsG0080049014.01.T01:intron 45.0%
GGGAGTGATGAAGTCCAAAA+GGG - contig609end:5706-5725 None:intergenic 45.0%
GGGGTAGGTGCATGTAATTT+GGG - contig609end:8730-8749 None:intergenic 45.0%
GGGTAGGTGCATGTAATTTG+GGG - contig609end:8729-8748 None:intergenic 45.0%
GGGTATAAAGCGAACTCACA+AGG - contig609end:6723-6742 None:intergenic 45.0%
GTGAAGTAAAGCTGAAGGAC+TGG + contig609end:5039-5058 MsG0080049014.01.T01:CDS 45.0%
GTGATCGTTTAGTCACATGG+TGG + contig609end:5892-5911 MsG0080049014.01.T01:intron 45.0%
GTTACATGGCCTCTTTATGG+TGG + contig609end:5538-5557 MsG0080049014.01.T01:CDS 45.0%
GTTCTTCCAACAGACAGATG+GGG - contig609end:7104-7123 None:intergenic 45.0%
GTTTAGTCACATGGTGGCAA+CGG + contig609end:5898-5917 MsG0080049014.01.T01:intron 45.0%
GTTTGGATTTGAACACCCCT+AGG - contig609end:7160-7179 None:intergenic 45.0%
TAACTCCCCTCTAATGGCAA+AGG - contig609end:8787-8806 None:intergenic 45.0%
TACGTTGCAAGAGATCAGAC+GGG + contig609end:1454-1473 MsG0080049014.01.T01:CDS 45.0%
TCCCAAACAAAGGGAGTTGA+AGG - contig609end:5950-5969 None:intergenic 45.0%
TGAAGATGAACATGAGGGAC+TGG - contig609end:7711-7730 None:intergenic 45.0%
TGAGGCGAAAGAATCTCATG+GGG + contig609end:5106-5125 MsG0080049014.01.T01:CDS 45.0%
TGAGTCGTGAAATCAGCATC+TGG - contig609end:5867-5886 None:intergenic 45.0%
TGATGGGAGATGACAGCTAA+GGG - contig609end:6262-6281 None:intergenic 45.0%
TGCAAAAGGGGGTAAAAGTG+GGG - contig609end:4645-4664 None:intergenic 45.0%
TGCCTTAAGTGTGATAGGAG+AGG + contig609end:2438-2457 MsG0080049014.01.T01:CDS 45.0%
TGCTAACGGCAAAAACGTTG+GGG + contig609end:8154-8173 MsG0080049014.01.T01:intron 45.0%
TGCTAACGGCAAAAACGTTG+GGG - contig609end:8173-8154 None:intergenic 45.0%
TGGAGATGGTGAGAGATAGA+TGG - contig609end:7763-7782 None:intergenic 45.0%
TGGGAGTGATGAAGTCCAAA+AGG - contig609end:5707-5726 None:intergenic 45.0%
TTCTTTCGCCTCAGATTCCT+TGG - contig609end:5099-5118 None:intergenic 45.0%
TTGATGGGAGATGACAGCTA+AGG - contig609end:6263-6282 None:intergenic 45.0%
TTGCATATACCACGACATGC+AGG - contig609end:2631-2650 None:intergenic 45.0%
TTGTCATTGGATCTCCAGAG+AGG - contig609end:3407-3426 None:intergenic 45.0%
! ACGGAGGTAGTGGTTTGTAA+TGG + contig609end:2265-2284 MsG0080049014.01.T01:intron 45.0%
! AGAGCATTCAATCCGGTTTC+TGG - contig609end:3584-3603 None:intergenic 45.0%
! CCCTTCAACTCCCTTTGTTT+GGG + contig609end:5946-5965 MsG0080049014.01.T01:intron 45.0%
! CTCTGGAGATCCAATGACAA+TGG + contig609end:3407-3426 MsG0080049014.01.T01:intron 45.0%
! GACTCTATTGGCCTAATCAC+TGG + contig609end:1983-2002 MsG0080049014.01.T01:intron 45.0%
! GAGGGGCGTATTCTTGAAAA+TGG + contig609end:4042-4061 MsG0080049014.01.T01:CDS 45.0%
! GCAGGGACCAATTTTGCTAA+CGG + contig609end:8140-8159 MsG0080049014.01.T01:intron 45.0%
! GCAGGGACCAATTTTGCTAA+CGG - contig609end:8159-8140 None:intergenic 45.0%
! GGTGTTCTTGGTTCTTCTTC+TGG + contig609end:1753-1772 MsG0080049014.01.T01:CDS 45.0%
! GTGGTTTGTAATGGAATGGG+AGG + contig609end:2274-2293 MsG0080049014.01.T01:intron 45.0%
! GTTGGTGCCTTAAGTGTGAT+AGG + contig609end:2433-2452 MsG0080049014.01.T01:CDS 45.0%
! TCTGAGGCGAAAGAATCTCA+TGG + contig609end:5104-5123 MsG0080049014.01.T01:CDS 45.0%
!! GTCTCTGAGATAACACATCC+TGG + contig609end:5305-5324 MsG0080049014.01.T01:CDS 45.0%
!! TATACTCCTGAGGGTGTTCT+TGG + contig609end:1741-1760 MsG0080049014.01.T01:CDS 45.0%
!!! GAAGTTTTGAGCCAAGAGGA+AGG + contig609end:6030-6049 MsG0080049014.01.T01:intron 45.0%
!!! GGTTTTATCTGGCATCGACA+TGG - contig609end:1499-1518 None:intergenic 45.0%
!!! TTTTGCGGTTCGGTTTGGTT+CGG - contig609end:7322-7341 None:intergenic 45.0%
!! ATTCATATTATAAATTATAT+TGG - contig609end:8842-8861 None:intergenic 5.0%
AACAAAGGGAGTTGAAGGGG+AGG - contig609end:5945-5964 None:intergenic 50.0%
AACCACCATACTCCTTAGGG+GGG - contig609end:3445-3464 None:intergenic 50.0%
AACGGTAACCGCTGTGTCAA+GGG + contig609end:5916-5935 MsG0080049014.01.T01:intron 50.0%
AAGTATTCCATGCCCCCCTA+AGG + contig609end:3430-3449 MsG0080049014.01.T01:intron 50.0%
AATTTCAAGCTGGGACCCGT+TGG + contig609end:3760-3779 MsG0080049014.01.T01:CDS 50.0%
ACAAAGGGAGTTGAAGGGGA+GGG - contig609end:5944-5963 None:intergenic 50.0%
ACCCGTTGGTCATATGGAGA+GGG + contig609end:3774-3793 MsG0080049014.01.T01:CDS 50.0%
ACCTGCCTTTGCCATTAGAG+GGG + contig609end:8779-8798 MsG0080049014.01.T01:intron 50.0%
AGAGATCAGACGGGAAGCAA+TGG + contig609end:1463-1482 MsG0080049014.01.T01:CDS 50.0%
AGAGGCTGTAAGATTGGCAG+AGG + contig609end:9211-9230 MsG0080049014.01.T01:CDS 50.0%
ATCAAGGGCCAACTGAACAG+TGG - contig609end:9168-9187 None:intergenic 50.0%
ATCACCACCATCACCAGGAT+TGG - contig609end:1790-1809 None:intergenic 50.0%
ATCAGCATCTGGCAAGTGCA+AGG - contig609end:5856-5875 None:intergenic 50.0%
ATCTGGCAAGTGCAAGGCAA+GGG - contig609end:5850-5869 None:intergenic 50.0%
ATTGATGTGGCATGCCAGTG+TGG + contig609end:7592-7611 MsG0080049014.01.T01:intron 50.0%
CAAAAGGGGGTAAAAGTGGG+GGG - contig609end:4643-4662 None:intergenic 50.0%
CAAATGCCAACGGCAGTTCA+AGG - contig609end:2970-2989 None:intergenic 50.0%
CAACCACCATACTCCTTAGG+GGG - contig609end:3446-3465 None:intergenic 50.0%
CAACTTCTTCCCAGAGGAAG+AGG - contig609end:1691-1710 None:intergenic 50.0%
CAAGGCAAGGGTTCCACAAT+AGG - contig609end:5838-5857 None:intergenic 50.0%
CATCAGTTAATGAGTCCGCG+TGG + contig609end:8074-8093 MsG0080049014.01.T01:intron 50.0%
CATCGTTCTTCCTCTTCCTC+TGG + contig609end:1678-1697 MsG0080049014.01.T01:CDS 50.0%
CCACAACCACCATACTCCTT+AGG - contig609end:3449-3468 None:intergenic 50.0%
CCCCTTCAACTCCCTTTGTT+TGG + contig609end:5945-5964 MsG0080049014.01.T01:intron 50.0%
CGCGGACTCATTAACTGATG+TGG - contig609end:8074-8093 None:intergenic 50.0%
CTGTAGACAGATACCGACAC+AGG - contig609end:6365-6384 None:intergenic 50.0%
CTTCATACGTGGCGTCTATG+TGG - contig609end:7556-7575 None:intergenic 50.0%
CTTCCGTTTGTCTGACAGCA+GGG + contig609end:8123-8142 MsG0080049014.01.T01:intron 50.0%
GAAAATGACAGGCAGGAGCA+TGG + contig609end:1896-1915 MsG0080049014.01.T01:CDS 50.0%
GAAACATCACCACCATCACC+AGG - contig609end:1795-1814 None:intergenic 50.0%
GAAGAACCAAGAACACCCTC+AGG - contig609end:1750-1769 None:intergenic 50.0%
GAGCTTGGAGTTGTACCTAG+GGG + contig609end:7142-7161 MsG0080049014.01.T01:intron 50.0%
GATTCTGCCGGGAAAATGAC+AGG + contig609end:1885-1904 MsG0080049014.01.T01:CDS 50.0%
GCAAAAGGGGGTAAAAGTGG+GGG - contig609end:4644-4663 None:intergenic 50.0%
GGACAGAACACAGAGGCAAT+GGG - contig609end:9569-9588 None:intergenic 50.0%
GGGTCCTACATCATTCTGCA+AGG - contig609end:4229-4248 None:intergenic 50.0%
TCCAATCTCTCCACCAAGTC+TGG - contig609end:9655-9674 None:intergenic 50.0%
TCCCTCTCCATATGACCAAC+GGG - contig609end:3778-3797 None:intergenic 50.0%
TCGGTGGATCTGCTTTACCA+CGG - contig609end:2868-2887 None:intergenic 50.0%
TCTTCAGATGCACGAGGTGT+AGG - contig609end:4099-4118 None:intergenic 50.0%
TCTTCCGTTTGTCTGACAGC+AGG + contig609end:8122-8141 MsG0080049014.01.T01:intron 50.0%
TGATGCTCCGCTTTCAACTG+CGG + contig609end:1638-1657 MsG0080049014.01.T01:CDS 50.0%
TGCAGAACGAGTGATGCTGA+TGG + contig609end:3554-3573 MsG0080049014.01.T01:CDS 50.0%
TTGAGCCAAGAGGAAGGGAA+GGG + contig609end:6036-6055 MsG0080049014.01.T01:intron 50.0%
TTTGAGCCAAGAGGAAGGGA+AGG + contig609end:6035-6054 MsG0080049014.01.T01:intron 50.0%
! CCTAAGGAGTATGGTGGTTG+TGG + contig609end:3446-3465 MsG0080049014.01.T01:intron 50.0%
! CTTCTGGTGATGATTCTGCC+GGG + contig609end:1874-1893 MsG0080049014.01.T01:CDS 50.0%
! GCATTCAATCCGGTTTCTGG+CGG - contig609end:3581-3600 None:intergenic 50.0%
! GCTTCTGGTGATGATTCTGC+CGG + contig609end:1873-1892 MsG0080049014.01.T01:CDS 50.0%
! TAAAGCTGAAGGACTGGCAG+CGG + contig609end:5045-5064 MsG0080049014.01.T01:CDS 50.0%
! TGGTGATGTTTCGCCTGATG+AGG + contig609end:1803-1822 MsG0080049014.01.T01:CDS 50.0%
!! ACCAGACTTGGTGGAGAGAT+TGG + contig609end:9651-9670 MsG0080049014.01.T01:intron 50.0%
!! ATGGTGGGCAACAACAATGG+TGG + contig609end:5758-5777 MsG0080049014.01.T01:intron 50.0%
!! GTTTCCAATCCTGGTGATGG+TGG + contig609end:1783-1802 MsG0080049014.01.T01:CDS 50.0%
!! TGGGTTGATGCATCCTGTGT+CGG + contig609end:6349-6368 MsG0080049014.01.T01:intron 50.0%
!! TTCGGTCTGGATCGGTTTTG+AGG - contig609end:8590-8609 None:intergenic 50.0%
ACACGAGGGAAGAAGGGGAT+TGG + contig609end:7927-7946 MsG0080049014.01.T01:intron 55.0%
ACGCCACGTATAAAGCCACG+CGG - contig609end:8092-8111 None:intergenic 55.0%
AGAACACAGAGGCAATGGGC+GGG - contig609end:9565-9584 None:intergenic 55.0%
AGCTGTCTGGCTGAACACGA+GGG + contig609end:7913-7932 MsG0080049014.01.T01:intron 55.0%
AGTCCACGTGGCTTCATACG+TGG - contig609end:7567-7586 None:intergenic 55.0%
ATCATCGCCGAAACGGAGGA+CGG - contig609end:6176-6195 None:intergenic 55.0%
ATCTCCTGAAAGCCTGGGAG+AGG + contig609end:9193-9212 MsG0080049014.01.T01:CDS 55.0%
ATGCAGACGAGCAGATGTGC+TGG + contig609end:3091-3110 MsG0080049014.01.T01:CDS 55.0%
CAAAGGGAGTTGAAGGGGAG+GGG - contig609end:5943-5962 None:intergenic 55.0%
CAACGGTAACCGCTGTGTCA+AGG + contig609end:5915-5934 MsG0080049014.01.T01:intron 55.0%
CACGAGGGAAGAAGGGGATT+GGG + contig609end:7928-7947 MsG0080049014.01.T01:intron 55.0%
CAGAACACAGAGGCAATGGG+CGG - contig609end:9566-9585 None:intergenic 55.0%
CATCTGGCAAGTGCAAGGCA+AGG - contig609end:5851-5870 None:intergenic 55.0%
CCAATCTTACAGCCTCTCCC+AGG - contig609end:9208-9227 None:intergenic 55.0%
CCTCCGTTTCGGCGATGATT+GGG + contig609end:6177-6196 MsG0080049014.01.T01:intron 55.0%
CCTGGGAGAGGCTGTAAGAT+TGG + contig609end:9205-9224 MsG0080049014.01.T01:CDS 55.0%
CGGGAAGCAATGGAGATGCA+CGG + contig609end:1473-1492 MsG0080049014.01.T01:CDS 55.0%
CGGTGGATCTGCTTTACCAC+GGG - contig609end:2867-2886 None:intergenic 55.0%
CTACACCCTTCCCTTCCTCT+TGG - contig609end:6044-6063 None:intergenic 55.0%
CTCCGTTTCGGCGATGATTG+GGG + contig609end:6178-6197 MsG0080049014.01.T01:intron 55.0%
GACCCGTTGGTCATATGGAG+AGG + contig609end:3773-3792 MsG0080049014.01.T01:CDS 55.0%
GAGTGAGAGTGGTAGCTGTC+TGG + contig609end:7900-7919 MsG0080049014.01.T01:intron 55.0%
GCTGAACACGAGGGAAGAAG+GGG + contig609end:7922-7941 MsG0080049014.01.T01:intron 55.0%
GCTTGAAAAGGGCAACCAGC+AGG - contig609end:6674-6693 None:intergenic 55.0%
GGCAGACTTGCCATCAGTGT+AGG + contig609end:2391-2410 MsG0080049014.01.T01:CDS 55.0%
GGCTGAACACGAGGGAAGAA+GGG + contig609end:7921-7940 MsG0080049014.01.T01:intron 55.0%
GGCTGTAAGATTGGCAGAGG+AGG + contig609end:9214-9233 MsG0080049014.01.T01:CDS 55.0%
GGGACAGAACACAGAGGCAA+TGG - contig609end:9570-9589 None:intergenic 55.0%
GGTCCCTGCTGTCAGACAAA+CGG - contig609end:8129-8148 None:intergenic 55.0%
GTAGTTGGTTAGGCTGGAGC+AGG + contig609end:5660-5679 MsG0080049014.01.T01:intron 55.0%
TAGCTGTCTGGCTGAACACG+AGG + contig609end:7912-7931 MsG0080049014.01.T01:intron 55.0%
TCCCCTCTAATGGCAAAGGC+AGG - contig609end:8783-8802 None:intergenic 55.0%
TCCTCCGTTTCGGCGATGAT+TGG + contig609end:6176-6195 MsG0080049014.01.T01:intron 55.0%
TCGTCGGCAGGATGTTCCAA+AGG + contig609end:5346-5365 MsG0080049014.01.T01:CDS 55.0%
TGCCCCAATCATCGCCGAAA+CGG - contig609end:6183-6202 None:intergenic 55.0%
TGGCTGAACACGAGGGAAGA+AGG + contig609end:7920-7939 MsG0080049014.01.T01:intron 55.0%
TTGAAGCACAGGAGGAGTGG+CGG + contig609end:7870-7889 MsG0080049014.01.T01:intron 55.0%
TTGCAGCCTTGAACTGCCGT+TGG + contig609end:2961-2980 MsG0080049014.01.T01:intron 55.0%
TTGGGATGTCTTTCGTCGGC+AGG + contig609end:5334-5353 MsG0080049014.01.T01:CDS 55.0%
! ACGTGCGGTTAGGTTCGGTT+TGG - contig609end:8537-8556 None:intergenic 55.0%
!! AACTAGGGGTGTTCGCGGTT+CGG - contig609end:8608-8627 None:intergenic 55.0%
!! AGTCCGCGTGGCTTTATACG+TGG + contig609end:8086-8105 MsG0080049014.01.T01:intron 55.0%
!! CGGTTCGGTTTGGTTCGGTT+CGG - contig609end:7317-7336 None:intergenic 55.0%
!! GGTACAACTAGGGGTGTTCG+CGG - contig609end:8613-8632 None:intergenic 55.0%
!!! GCTCCTGCCTGTCATTTTCC+CGG - contig609end:1895-1914 None:intergenic 55.0%
ACAGCCTCTCCCAGGCTTTC+AGG - contig609end:9200-9219 None:intergenic 60.0%
ACGCCACGTATGAAGCCACG+TGG + contig609end:7561-7580 MsG0080049014.01.T01:intron 60.0%
ACTGATGTGGCATGCCAGCG+TGG - contig609end:8061-8080 None:intergenic 60.0%
AGAGGCAATGGGCGGGTAGT+GGG - contig609end:9558-9577 None:intergenic 60.0%
CCACGGCTCCACTCCTACTT+AGG - contig609end:6615-6634 None:intergenic 60.0%
CCATACTCCTTAGGGGGGCA+TGG - contig609end:3440-3459 None:intergenic 60.0%
CCATGCCCCCCTAAGGAGTA+TGG + contig609end:3437-3456 MsG0080049014.01.T01:intron 60.0%
CCCAATCATCGCCGAAACGG+AGG - contig609end:6180-6199 None:intergenic 60.0%
CCTAAGTAGGAGTGGAGCCG+TGG + contig609end:6612-6631 MsG0080049014.01.T01:intron 60.0%
CTGCCGGGAAAATGACAGGC+AGG + contig609end:1889-1908 MsG0080049014.01.T01:CDS 60.0%
GCTGATGGTCCGCCAGAAAC+CGG + contig609end:3569-3588 MsG0080049014.01.T01:CDS 60.0%
GCTGGGACCCGTTGGTCATA+TGG + contig609end:3768-3787 MsG0080049014.01.T01:CDS 60.0%
TCATCGCCGAAACGGAGGAC+GGG - contig609end:6175-6194 None:intergenic 60.0%
TTCGGCGATGATTGGGGCAG+CGG + contig609end:6184-6203 MsG0080049014.01.T01:intron 60.0%
TTCTCCCCCGTCCTCCGTTT+CGG + contig609end:6166-6185 MsG0080049014.01.T01:intron 60.0%
! TGCCCCCCTAAGGAGTATGG+TGG + contig609end:3440-3459 MsG0080049014.01.T01:intron 60.0%
!! GTTCGCGGTTCGGTCTGGAT+CGG - contig609end:8598-8617 None:intergenic 60.0%
AAGCACAGGAGGAGTGGCGG+AGG + contig609end:7873-7892 MsG0080049014.01.T01:intron 65.0%
ATCGCCGAAACGGAGGACGG+GGG - contig609end:6173-6192 None:intergenic 65.0%
CAGAGGCAATGGGCGGGTAG+TGG - contig609end:9559-9578 None:intergenic 65.0%
CATCGCCGAAACGGAGGACG+GGG - contig609end:6174-6193 None:intergenic 65.0%
GCGGAGGACAGGAGTGAGAG+TGG + contig609end:7889-7908 MsG0080049014.01.T01:intron 65.0%
GCTCTCGTCAGTGCTTCCCG+TGG + contig609end:2848-2867 MsG0080049014.01.T01:CDS 65.0%
GGAGGGGACCCTTGACACAG+CGG - contig609end:5927-5946 None:intergenic 65.0%
TCGGCGATGATTGGGGCAGC+GGG + contig609end:6185-6204 MsG0080049014.01.T01:intron 65.0%
! CAGGAGGAGTGGCGGAGGAC+AGG + contig609end:7878-7897 MsG0080049014.01.T01:intron 70.0%
!! GGGGTGTTCGCGGTTCGGTC+TGG - contig609end:8603-8622 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
contig609end gene 1316 9979 1316 ID=MsG0080049014.01;
contig609end mRNA 1316 9979 1316 ID=MsG0080049014.01.T01;Parent=MsG0080049014.01
contig609end exon 1316 1935 1316 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 1396 1935 1396 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end CDS 2348 2487 2348 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 2348 2487 2348 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 2588 2687 2588 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 2588 2687 2588 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 2795 2927 2795 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 2795 2927 2795 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 3058 3144 3058 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 3058 3144 3058 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 3236 3399 3236 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 3236 3399 3236 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 3503 3874 3503 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 3503 3874 3503 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 4003 4332 4003 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 4003 4332 4003 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 5017 5367 5017 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 5017 5367 5017 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 5538 5610 5538 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 5538 5610 5538 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 6621 6706 6621 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 6621 6706 6621 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 9164 9283 9164 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 9164 9283 9164 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 9434 9504 9434 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 9434 9504 9434 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
contig609end CDS 9656 9755 9656 ID=MsG0080049014.01.T01.cds;Parent=MsG0080049014.01.T01
contig609end exon 9656 9979 9656 ID=MsG0080049014.01.T01.exon;Parent=MsG0080049014.01.T01
Gene Sequence

>MsG0080049014.01.T01

ATGGATCAAGCAAGATCGAACAACAACATCGATGAGAATGTAGGAATTCCAGACGATTTACGTTGCAAGAGATCAGACGGGAAGCAATGGAGATGCACGGCCATGTCGATGCCAGATAAAACCGTTTGCGAGAAGCATTACATTCAAGCCAAGAAAAGAGCAGCGAATTCTGCCATGAGAGCTAATCTCAAGAAATCTAAGCCCGATTCTGATGTTAATTTGGAAAGTAAGAGTGATGATTTTGATGCTCCGCTTTCAACTGCGGTTAATAATAATAATAATCATCGTTCTTCCTCTTCCTCTGGGAAGAAGTTGTTTGATAAGGTTTCTAAGAATCAGTTTCGTTATACTCCTGAGGGTGTTCTTGGTTCTTCTTCTGGAAATAATGTTTCCAATCCTGGTGATGGTGGTGATGTTTCGCCTGATGAGGATGCTGTTCTGTTTGAAGAGAATTGGGTCTCGAATGATTCGCAGCATGCTTCTGGTGATGATTCTGCCGGGAAAATGACAGGCAGGAGCATGGATGTTGATGTCAACACTGAATGTTCTAATGGAACATCGGATTCTTCTCAAGAAACTGGCAGGCAGACTTGCCATCAGTGTAGGAAGAATGTTAAAGATGTTAGTTGGTGCCTTAAGTGTGATAGGAGAGGATACTGTGATAGCTGCATATCAACATGGTATTCTGACATTCCATTGGATGAAATTCAGAAGATATGTCCTGCATGTCGTGGTATATGCAATTGTAAAATTTGCTTACGTAGTGATAATTCCATAAAGGTTCGGATACGTGAGATACCTGTACTGGATAAGTTACAGTATTTGCACGTGTTGCTCTCGTCAGTGCTTCCCGTGGTAAAGCAGATCCACCGAGAACAATGTTTTGAAGTTGAACTTGAAAAGAAGTTGCGTGGTGCTGAAATAGATCTTCCAAGGACAAAGTTGAATGCAGACGAGCAGATGTGCTGGTACATCTATGACACTTATGTTGAAATTGATGCAATTTATGTAGGATACCTATCACTGATTATCATCGACGCTGCCCAAGTTGTTCATATGATTTGTGCCTTATTTGTTGTCGAGATCTTCGGGAAGCTACTTTACATCAGAGTGAAGAACCTCAAACTGAGCATGCAAAAACTACTGATCAAACATATTAAGCAAATGAATTGGGTCGCAAAATTGGTAAAAAATGTAGAGGAAATGGTTAGTGGATGCAGAACGAGTGATGCTGATGGTCCGCCAGAAACCGGATTGAATGCTCTCAGACTTTGCCAATATTCTCAAAGAGAGGCTAGCAATGATAATTATCTTTATTGTCCAACATCTGAAGAACTCAAAACTGATGGGATTGGCATGTTTAGAACACACTGGAAAACTGGTGAGCCCATTATCGTTAAGCAAGTATTTGATAGGTCATCAATTTCAAGCTGGGACCCGTTGGTCATATGGAGAGGGATTCTTGAGACAACAGATGAGAATATGAAAGATGATAACAGAATGGTTAAGGCCCTAGATTGCTTAGATGGGTCTGAGATTGATATCGAGCTTAATCAGTTCATGAAAGGATATTCTGAGGGGCGTATTCTTGAAAATGGTTGGCCACAAATATTGAAGCTGAAGGATTGGCCTACACCTCGTGCATCTGAAGAATTTCTTTTGTACCAAAGACCTGAATTTATCAGCAAACTGCCTTTACTTCAGTATATTCACTCCAAGTGGGGCCTTCTTAATGTTGCAGCTAAATTGCCTCATTACTCCTTGCAGAATGATGTAGGACCCAAGATATATATATCTTATGGGATTACTGATGAACTTGGCAGAGGTGATTCTGTCACAAAACTCCACTTCAATATGCGTGACATGGTGTACCTTTTGGTTCATTCAAGTGAAGTAAAGCTGAAGGACTGGCAGCGGACAAAAGTTGAAATGATGCAGAAAACTTCCAAGGAATCTGAGGCGAAAGAATCTCATGGGGATCCAGATATATGTTCAAGAGCGAGTTCACCCGATTCATCCTTTTGTACAAAAATTAATGGACTGGATTTGGAATCAGACCAGAAAGATTCGACTATGGATCAAGGGGTTGAAGTTTATTCTAGTGCTGAAGGGAATTTGGTCAATTGTGAAATTCCATTAAGAGAAAATGGAGACGTCTCTGAGATAACACATCCTGGAGTTCTTTGGGATGTCTTTCGTCGGCAGGATGTTCCAAAGGTTACATGGCCTCTTTATGGTGGAGCTATTTTTCTTGACAGACACCATAAAAGAAAGTTGAAGGAAGAATTTGGAGTGGAGCCGTGGTCATTTGAACAGAATTTGGGGGAAGCTATATTTGTTCCTGCTGGTTGCCCTTTTCAAGCAAGAAATGTTCAGTCCACTGTTCAGTTGGCCCTTGATTTCTTATCTCCTGAAAGCCTGGGAGAGGCTGTAAGATTGGCAGAGGAGGTTCGCCGTCTACCTAATGAACATGAAGCAAAACTTCAAGTTTTGGAGGTGGGGAAGATATCTCTTTATGCAGCAAGTTCAGCAATCAAAGAAGTTCAGAAACTTGTACTTGACCCAAAACTTGGTGGAGAGATTGGATATGGAGACCCTAATTTGACTGCAATGGTTTCTGAGAACTACGAGAAAATGTCTAAGCAGAGGCAGATAACTTGTGCTTGA

Protein sequence

>MsG0080049014.01.T01

MDQARSNNNIDENVGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRANLKKSKPDSDVNLESKSDDFDAPLSTAVNNNNNHRSSSSSGKKLFDKVSKNQFRYTPEGVLGSSSGNNVSNPGDGGDVSPDEDAVLFEENWVSNDSQHASGDDSAGKMTGRSMDVDVNTECSNGTSDSSQETGRQTCHQCRKNVKDVSWCLKCDRRGYCDSCISTWYSDIPLDEIQKICPACRGICNCKICLRSDNSIKVRIREIPVLDKLQYLHVLLSSVLPVVKQIHREQCFEVELEKKLRGAEIDLPRTKLNADEQMCWYIYDTYVEIDAIYVGYLSLIIIDAAQVVHMICALFVVEIFGKLLYIRVKNLKLSMQKLLIKHIKQMNWVAKLVKNVEEMVSGCRTSDADGPPETGLNALRLCQYSQREASNDNYLYCPTSEELKTDGIGMFRTHWKTGEPIIVKQVFDRSSISSWDPLVIWRGILETTDENMKDDNRMVKALDCLDGSEIDIELNQFMKGYSEGRILENGWPQILKLKDWPTPRASEEFLLYQRPEFISKLPLLQYIHSKWGLLNVAAKLPHYSLQNDVGPKIYISYGITDELGRGDSVTKLHFNMRDMVYLLVHSSEVKLKDWQRTKVEMMQKTSKESEAKESHGDPDICSRASSPDSSFCTKINGLDLESDQKDSTMDQGVEVYSSAEGNLVNCEIPLRENGDVSEITHPGVLWDVFRRQDVPKVTWPLYGGAIFLDRHHKRKLKEEFGVEPWSFEQNLGEAIFVPAGCPFQARNVQSTVQLALDFLSPESLGEAVRLAEEVRRLPNEHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGGEIGYGDPNLTAMVSENYEKMSKQRQITCA*