AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018699.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018699.01.T01 MTR_5g046560 70.027 377 38 4 1 349 1 330 1.64e-176 493
MsG0480018699.01.T01 MTR_6g049240 69.231 377 41 4 1 349 62 391 4.04e-173 486
MsG0480018699.01.T01 MTR_4g017150 61.804 377 53 6 1 349 1 314 2.62e-142 405
MsG0480018699.01.T01 MTR_5g046460 97.297 74 2 0 1 74 1 74 7.68e-46 152
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018699.01.T01 AT5G17620 53.968 378 94 7 1 347 1 329 6.41e-125 362

Find 96 sgRNAs with CRISPR-Local

Find 583 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAGAAATTGCTAAGTTTC+TGG 0.146349 4:+8746417 MsG0480018699.01.T01:CDS
CCCAACATACACAGAATATT+TGG 0.189575 4:+8751242 MsG0480018699.01.T01:intron
GCTCCATGCCAGCAAATAAA+AGG 0.236296 4:-8744943 None:intergenic
TGAATGTTCTAGCTGTTTCT+AGG 0.248603 4:-8749869 None:intergenic
TTCTGGATTATCAGCATATA+TGG 0.252159 4:-8746824 None:intergenic
ATCAGGAACAACCTCCATTC+TGG 0.264700 4:-8746841 None:intergenic
TGTACTTACAACAGGCTATT+AGG 0.275494 4:+8745628 MsG0480018699.01.T01:intron
TTCTCGAGTGGCTCTTCTTT+CGG 0.300442 4:+8744975 MsG0480018699.01.T01:CDS
ATCTCAACTGCGGGAACATT+TGG 0.300443 4:+8749839 MsG0480018699.01.T01:CDS
ACCAGCTGCCAATCGATTAT+TGG 0.313669 4:+8751349 MsG0480018699.01.T01:CDS
GAAGCGATTCAGAAGAAATT+AGG 0.315551 4:+8744881 MsG0480018699.01.T01:CDS
ATTTCATTAGGATGAGATTC+AGG 0.323225 4:+8747164 MsG0480018699.01.T01:intron
AAACTCTTACAATGGATATA+TGG 0.336414 4:-8747065 None:intergenic
TATAGGGGCCTCTAGGTTAT+TGG 0.348591 4:-8744796 None:intergenic
ACCGGTTTAACAACCTCTAT+AGG 0.352565 4:-8744813 None:intergenic
CCAACATACACAGAATATTT+GGG 0.365373 4:+8751243 MsG0480018699.01.T01:intron
GGGAAACAATTTACATTCTT+CGG 0.370537 4:-8747023 None:intergenic
GCAGAAATTGCTAAGTTTCT+GGG 0.374288 4:+8746418 MsG0480018699.01.T01:CDS
CTCTTATGCTAGACAACTCT+TGG 0.376784 4:+8747786 MsG0480018699.01.T01:CDS
ACCACTGTAACATCTGATAT+AGG 0.381020 4:+8747208 MsG0480018699.01.T01:CDS
ACCTCAGTGTACTCCTCATC+TGG 0.381852 4:-8749813 None:intergenic
CCGGTTTAACAACCTCTATA+GGG 0.388415 4:-8744812 None:intergenic
AATTGAAGAAGCAAGCATTA+AGG 0.392786 4:+8743760 MsG0480018699.01.T01:five_prime_UTR
CCCTATAGAGGTTGTTAAAC+CGG 0.413358 4:+8744812 MsG0480018699.01.T01:five_prime_UTR
ACAGTCATAAATCGAGATCT+TGG 0.417585 4:+8752571 MsG0480018699.01.T01:intron
CTCTCCATGTTCACGAGCAA+TGG 0.449246 4:-8752608 None:intergenic
GAAGATGGCATCAAAGCAAA+TGG 0.457332 4:+8744859 MsG0480018699.01.T01:exon
CTCTTGGGAAACAAGGGAAC+CGG 0.459848 4:+8747802 MsG0480018699.01.T01:CDS
TTGAATGGCGTCGGTATCTA+CGG 0.460713 4:-8746452 None:intergenic
CAGGCCAGAGGTTTCTGAGC+TGG 0.464007 4:+8749062 MsG0480018699.01.T01:intron
ACAAGGGAACCGGCAGAAAA+CGG 0.468513 4:+8747812 MsG0480018699.01.T01:CDS
TCCAATAATCGATTGGCAGC+TGG 0.471493 4:-8751350 None:intergenic
TTTCTATAGTGTTGACGAGC+AGG 0.475231 4:+8746943 MsG0480018699.01.T01:intron
CCACTGTAACATCTGATATA+GGG 0.478023 4:+8747209 MsG0480018699.01.T01:CDS
AGTTGATGACTTGGCATCCA+AGG 0.479316 4:+8749134 MsG0480018699.01.T01:CDS
GGCATACAAAATGCTTCTAA+AGG 0.482031 4:+8751373 MsG0480018699.01.T01:CDS
GAACCGGCAGAAAACGGAAT+AGG 0.488122 4:+8747818 MsG0480018699.01.T01:CDS
GACTGAATCTGAACATCTGC+GGG 0.489115 4:-8747043 None:intergenic
TAACCTAGAGGCCCCTATAG+AGG 0.489171 4:+8744800 MsG0480018699.01.T01:five_prime_UTR
GCTTCCATTGCTCGTGAACA+TGG 0.492879 4:+8752604 MsG0480018699.01.T01:CDS
CAACCTCTATAGGGGCCTCT+AGG 0.498258 4:-8744803 None:intergenic
GACTCCAGCTCAGAAACCTC+TGG 0.498584 4:-8749066 None:intergenic
TGAGCAGATGCATTTGCCCT+TGG 0.508997 4:-8744917 None:intergenic
CTCCATGCCAGCAAATAAAA+GGG 0.513502 4:-8744942 None:intergenic
AAGAGTGTGTAACACACATA+TGG 0.518411 4:-8747768 None:intergenic
ATCTATCAAGTGGATGTCCT+TGG 0.523662 4:-8746969 None:intergenic
AATTAGATGACTAACTTGAA+TGG 0.527212 4:-8746467 None:intergenic
ATAAAAGATTGTTGTCGTGT+AGG 0.531518 4:+8751274 MsG0480018699.01.T01:CDS
GTTCCACAACTACATGGGTT+CGG 0.537879 4:+8751326 MsG0480018699.01.T01:CDS
TTTCTCAACAAAACTTACAA+GGG 0.539564 4:+8745665 MsG0480018699.01.T01:CDS
GTATGCCTCCAATAATCGAT+TGG 0.540437 4:-8751357 None:intergenic
TAGGAATGCTAAATTATCCA+AGG 0.541824 4:+8744900 MsG0480018699.01.T01:CDS
ATGGAGGTTCCACAACTACA+TGG 0.544282 4:+8751320 MsG0480018699.01.T01:CDS
TCGTCCATGGACACATATGA+TGG 0.548384 4:+8751301 MsG0480018699.01.T01:CDS
TAGACAACTCTTGGGAAACA+AGG 0.550161 4:+8747795 MsG0480018699.01.T01:CDS
GAAAGAAGAGCCACTCGAGA+AGG 0.556643 4:-8744973 None:intergenic
TGAGGTGGAATCTCAACTGC+GGG 0.558035 4:+8749830 MsG0480018699.01.T01:CDS
TCGTCTAATTGTAGATCTAG+TGG 0.560463 4:+8746795 MsG0480018699.01.T01:CDS
ACCTCCATCATATGTGTCCA+TGG 0.562139 4:-8751305 None:intergenic
TAATTTGATACATAAGAAGA+TGG 0.562235 4:+8744844 MsG0480018699.01.T01:exon
TCTTATGCTAGACAACTCTT+GGG 0.566076 4:+8747787 MsG0480018699.01.T01:CDS
TTCTCAACAAAACTTACAAG+GGG 0.566205 4:+8745666 MsG0480018699.01.T01:CDS
AAAGAAGAGCCACTCGAGAA+GGG 0.578792 4:-8744972 None:intergenic
TTCGAGCTGTCTCCTCGTCA+CGG 0.578946 4:-8745699 None:intergenic
ATCACAACTCTTCAGGCCAG+AGG 0.580589 4:+8749050 MsG0480018699.01.T01:intron
TGTTGACGAGCAGGTAGCCA+AGG 0.584320 4:+8746952 MsG0480018699.01.T01:CDS
TATATGCTGATAATCCAGAA+TGG 0.585290 4:+8746827 MsG0480018699.01.T01:CDS
ATGACTAACTTGAATGGCGT+CGG 0.589838 4:-8746461 None:intergenic
ATGTTCACGAGCAATGGAAG+CGG 0.593084 4:-8752602 None:intergenic
AGCTGCCAATCGATTATTGG+AGG 0.606995 4:+8751352 MsG0480018699.01.T01:CDS
ACAGGGACATGGAAGCTATG+AGG 0.607987 4:+8746756 MsG0480018699.01.T01:intron
CGGTTTAACAACCTCTATAG+GGG 0.609417 4:-8744811 None:intergenic
ATTCAACATGATTTACACCA+AGG 0.609705 4:+8749887 MsG0480018699.01.T01:CDS
CTGCAATGGAATCTATCAAG+TGG 0.610627 4:-8746979 None:intergenic
ATGCATGTGTAACAGGGACA+TGG 0.616424 4:+8746745 MsG0480018699.01.T01:intron
GGTCCGAACCCATGTAGTTG+TGG 0.617719 4:-8751329 None:intergenic
TCGTGTAGGAAATTCGTCCA+TGG 0.622082 4:+8751288 MsG0480018699.01.T01:CDS
AGCGCTATGCCCTTCTCGAG+TGG 0.628494 4:+8744963 MsG0480018699.01.T01:CDS
AGATGAGGAGTACACTGAGG+TGG 0.635027 4:+8749815 MsG0480018699.01.T01:CDS
AGGAATGCTAAATTATCCAA+GGG 0.635737 4:+8744901 MsG0480018699.01.T01:CDS
TATAGAGGTTGTTAAACCGG+TGG 0.639436 4:+8744815 MsG0480018699.01.T01:five_prime_UTR
AGACAACTCTTGGGAAACAA+GGG 0.646948 4:+8747796 MsG0480018699.01.T01:CDS
GGACTGAATCTGAACATCTG+CGG 0.648556 4:-8747044 None:intergenic
CCCTATATCAGATGTTACAG+TGG 0.651262 4:-8747209 None:intergenic
CAACATACACAGAATATTTG+GGG 0.653308 4:+8751244 MsG0480018699.01.T01:intron
GCATGCTTATAATCCAGATG+AGG 0.661424 4:+8749800 MsG0480018699.01.T01:intron
TGGAGGTTCCACAACTACAT+GGG 0.663707 4:+8751321 MsG0480018699.01.T01:CDS
TCTGATATAGGGTCTTGCAT+CGG 0.673000 4:+8747220 MsG0480018699.01.T01:CDS
TCTAATTGTAGATCTAGTGG+AGG 0.678239 4:+8746798 MsG0480018699.01.T01:CDS
GGATGCGCTTGACCGTGACG+AGG 0.678865 4:+8745687 MsG0480018699.01.T01:CDS
TCCATGGACACATATGATGG+AGG 0.684377 4:+8751304 MsG0480018699.01.T01:CDS
ATGCTGATAATCCAGAATGG+AGG 0.685125 4:+8746830 MsG0480018699.01.T01:CDS
CTGAGGTGGAATCTCAACTG+CGG 0.706432 4:+8749829 MsG0480018699.01.T01:CDS
TTACAGGACCAATAACCTAG+AGG 0.713179 4:+8744788 MsG0480018699.01.T01:intron
TCCAGATGAGGAGTACACTG+AGG 0.761993 4:+8749812 MsG0480018699.01.T01:CDS
TTAGACGAAGCATTTCAGTG+CGG 0.813444 4:-8746780 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATGATTATAATCAAATTT+TGG + Chr4:8745096-8745115 MsG0480018699.01.T01:intron 10.0%
!!! AACAATAAATTTTATAAAGT+TGG - Chr4:8744084-8744103 None:intergenic 10.0%
!!! CATTTTTTTTTCAAATTTTT+AGG - Chr4:8744349-8744368 None:intergenic 10.0%
!! ACAAATTTACTATATTAACA+AGG - Chr4:8752418-8752437 None:intergenic 15.0%
!! ATATTCTATAAACATGTATT+CGG - Chr4:8746557-8746576 None:intergenic 15.0%
!! ATATTTCAAAATATAGACTT+AGG + Chr4:8746213-8746232 MsG0480018699.01.T01:intron 15.0%
!! ATTCAATCAATATATACAAA+AGG + Chr4:8748770-8748789 MsG0480018699.01.T01:intron 15.0%
!! TAAAAGATATTATATGGTAA+TGG + Chr4:8748964-8748983 MsG0480018699.01.T01:intron 15.0%
!! TGTATTATATAACTGAAAAA+TGG + Chr4:8750031-8750050 MsG0480018699.01.T01:intron 15.0%
!! TTATTGTTAAATTAGTATCT+GGG + Chr4:8744096-8744115 MsG0480018699.01.T01:intron 15.0%
!! TTTATTGTTAAATTAGTATC+TGG + Chr4:8744095-8744114 MsG0480018699.01.T01:intron 15.0%
!! TTTCATATAACAATCAATAT+AGG - Chr4:8744720-8744739 None:intergenic 15.0%
!!! CATTTTCAAAAACATTAATA+GGG - Chr4:8746106-8746125 None:intergenic 15.0%
!!! TCATTTTCAAAAACATTAAT+AGG - Chr4:8746107-8746126 None:intergenic 15.0%
!!! TTTTGCATATTATTAAATAC+AGG + Chr4:8749575-8749594 MsG0480018699.01.T01:intron 15.0%
!! AAAAACTAAAAGAGAAATAG+AGG - Chr4:8747332-8747351 None:intergenic 20.0%
!! AAAAATAAAACAGAACTTGA+AGG - Chr4:8747990-8748009 None:intergenic 20.0%
!! AAAATAAAACAGAACTTGAA+GGG - Chr4:8747989-8748008 None:intergenic 20.0%
!! AAAATTAGAGTTTAAGTAAC+AGG - Chr4:8749687-8749706 None:intergenic 20.0%
!! AAATTAGAGTTTAAGTAACA+GGG - Chr4:8749686-8749705 None:intergenic 20.0%
!! AAATTATTCCCATTATCTTA+TGG + Chr4:8751731-8751750 MsG0480018699.01.T01:intron 20.0%
!! AATTTCAGTTATAAAAGAGA+GGG - Chr4:8750210-8750229 None:intergenic 20.0%
!! ACATCTTGAAAATAGAAAAT+TGG - Chr4:8745513-8745532 None:intergenic 20.0%
!! ACTAAATCTTCATTTGAATA+GGG - Chr4:8749969-8749988 None:intergenic 20.0%
!! AGCTTAAAGAAAAATATGTT+TGG - Chr4:8751416-8751435 None:intergenic 20.0%
!! ATAAATTGAATCTCAACAAA+AGG + Chr4:8750931-8750950 MsG0480018699.01.T01:intron 20.0%
!! ATAATTTGGTTATCAAGTTT+AGG - Chr4:8747737-8747756 None:intergenic 20.0%
!! ATCAATATATACAAAAGGAT+TGG + Chr4:8748775-8748794 MsG0480018699.01.T01:intron 20.0%
!! ATCATAAGAAAGAGATATAA+AGG - Chr4:8746588-8746607 None:intergenic 20.0%
!! ATTAGGACTTATCTTTAAAT+TGG + Chr4:8747249-8747268 MsG0480018699.01.T01:intron 20.0%
!! CATTTGATAAAATTAACAGT+CGG - Chr4:8752308-8752327 None:intergenic 20.0%
!! GACAATAAGTAATATAATTC+AGG - Chr4:8744148-8744167 None:intergenic 20.0%
!! TAATTTGATACATAAGAAGA+TGG + Chr4:8744844-8744863 MsG0480018699.01.T01:exon 20.0%
!! TATTTGTATATGTGATATGT+TGG + Chr4:8751583-8751602 MsG0480018699.01.T01:intron 20.0%
!! TGAGAAAAAGAAATCAATTA+AGG - Chr4:8748220-8748239 None:intergenic 20.0%
!! TGCTAATTAAATTGTTTGTA+TGG + Chr4:8749500-8749519 MsG0480018699.01.T01:intron 20.0%
!! TGTTCAACATAATTAAAAAC+CGG - Chr4:8744047-8744066 None:intergenic 20.0%
!! TTAATGACAAAGTAAAAAGA+AGG - Chr4:8745003-8745022 None:intergenic 20.0%
!! TTGGACAATTACAAAATAAA+CGG - Chr4:8751763-8751782 None:intergenic 20.0%
!! TTTGCAATAGAATAAAGATT+TGG + Chr4:8747669-8747688 MsG0480018699.01.T01:intron 20.0%
!!! AATTTTATAAAGTTGGTACA+AGG - Chr4:8744077-8744096 None:intergenic 20.0%
!!! AATTTTGAAATGTTCTTATG+TGG + Chr4:8751954-8751973 MsG0480018699.01.T01:intron 20.0%
!!! ACTTTTTCAGAGTTAAAATT+AGG + Chr4:8745757-8745776 MsG0480018699.01.T01:intron 20.0%
!!! AGAATGTTAAATTTTCTCTT+AGG + Chr4:8746016-8746035 MsG0480018699.01.T01:intron 20.0%
!!! ATATAAAATAAAGTACTGCA+TGG + Chr4:8748243-8748262 MsG0480018699.01.T01:intron 20.0%
!!! ATATATTGATTGAATGAGAT+TGG - Chr4:8748765-8748784 None:intergenic 20.0%
!!! ATTTTCAGTTATTAAAGAGA+GGG - Chr4:8750259-8750278 None:intergenic 20.0%
!!! GAATGTTAAATTTTCTCTTA+GGG + Chr4:8746017-8746036 MsG0480018699.01.T01:intron 20.0%
!!! TACTTTTCTTGTTTAAATTG+CGG + Chr4:8746079-8746098 MsG0480018699.01.T01:intron 20.0%
!!! TATCAAATTATTTTATCCAC+CGG - Chr4:8744834-8744853 None:intergenic 20.0%
!!! TATTTTCAGTTATTAAAGAG+AGG - Chr4:8750260-8750279 None:intergenic 20.0%
!!! TTTTCTATTTTCAAGATGTT+CGG + Chr4:8745514-8745533 MsG0480018699.01.T01:intron 20.0%
! AAAAAACAATTTCAAGCTAC+AGG - Chr4:8745451-8745470 None:intergenic 25.0%
! AAAATGAATTTGCACTAGAT+CGG - Chr4:8749316-8749335 None:intergenic 25.0%
! AAACTCTTACAATGGATATA+TGG - Chr4:8747068-8747087 None:intergenic 25.0%
! AAATCCTTGATAAGAAATAG+AGG + Chr4:8750959-8750978 MsG0480018699.01.T01:intron 25.0%
! AACAAATCATCATTTAGATC+AGG - Chr4:8746861-8746880 None:intergenic 25.0%
! AAGAAAGAATAAACTGAGAA+AGG - Chr4:8746656-8746675 None:intergenic 25.0%
! AAGGAAAATTAAGGTTAGAT+TGG + Chr4:8748409-8748428 MsG0480018699.01.T01:intron 25.0%
! AAGTTTATACTTCCTGTTAT+TGG - Chr4:8750730-8750749 None:intergenic 25.0%
! AATAAACTGAGAAAGGAATA+TGG - Chr4:8746649-8746668 None:intergenic 25.0%
! AATATATACAAAAGGATTGG+TGG + Chr4:8748778-8748797 MsG0480018699.01.T01:intron 25.0%
! AATCAATATAGGTGAACATT+TGG - Chr4:8744709-8744728 None:intergenic 25.0%
! AATTAGAGTTTAAGTAACAG+GGG - Chr4:8749685-8749704 None:intergenic 25.0%
! AATTAGATGACTAACTTGAA+TGG - Chr4:8746470-8746489 None:intergenic 25.0%
! ACAATTTGTAAACACTCAAA+TGG - Chr4:8744686-8744705 None:intergenic 25.0%
! AGATGAATGAAATCTCATTA+AGG - Chr4:8747529-8747548 None:intergenic 25.0%
! AGGAAAATTAAGGTTAGATT+GGG + Chr4:8748410-8748429 MsG0480018699.01.T01:intron 25.0%
! AGTTTATACTTCCTGTTATT+GGG - Chr4:8750729-8750748 None:intergenic 25.0%
! ATATCTGTGAATAGAAACTT+TGG - Chr4:8751517-8751536 None:intergenic 25.0%
! ATATGACAACATATTAGAGA+AGG - Chr4:8749012-8749031 None:intergenic 25.0%
! ATATTAAAATTAGTGCAACG+TGG - Chr4:8749756-8749775 None:intergenic 25.0%
! ATCAAATACAATTCAACTGA+TGG - Chr4:8747361-8747380 None:intergenic 25.0%
! ATTATACCTTCTCGTTATTA+TGG + Chr4:8751694-8751713 MsG0480018699.01.T01:intron 25.0%
! ATTATCTAATTCAACGTAAC+CGG - Chr4:8751645-8751664 None:intergenic 25.0%
! ATTTAGATTTAGGTAAACCT+TGG - Chr4:8749154-8749173 None:intergenic 25.0%
! ATTTGGATTGTAGAAAAATG+CGG + Chr4:8750685-8750704 MsG0480018699.01.T01:intron 25.0%
! CAAACAGTTACAATATTTGT+TGG - Chr4:8750293-8750312 None:intergenic 25.0%
! CAAGAATCAGATTTAGATTT+AGG - Chr4:8749164-8749183 None:intergenic 25.0%
! CACTAAATCTTCATTTGAAT+AGG - Chr4:8749970-8749989 None:intergenic 25.0%
! CATAGTTATAGCTACTAATT+TGG - Chr4:8746513-8746532 None:intergenic 25.0%
! CATCTATATGTAACTATTGA+AGG + Chr4:8751075-8751094 MsG0480018699.01.T01:intron 25.0%
! CTGGTAATACTTACAAAAAA+AGG + Chr4:8744556-8744575 MsG0480018699.01.T01:intron 25.0%
! CTTCAATAGTTACATATAGA+TGG - Chr4:8751077-8751096 None:intergenic 25.0%
! GAAATTCTACTACAAAGAAT+GGG - Chr4:8748036-8748055 None:intergenic 25.0%
! GAATTTCAGTTATAAAAGAG+AGG - Chr4:8750211-8750230 None:intergenic 25.0%
! GACTTATCTTTAAATTGGAT+TGG + Chr4:8747254-8747273 MsG0480018699.01.T01:intron 25.0%
! GATGAATGAAATCTCATTAA+GGG - Chr4:8747528-8747547 None:intergenic 25.0%
! GCTACTAATTTGGTAAAATA+AGG - Chr4:8746503-8746522 None:intergenic 25.0%
! GTAGCTAGAAGAAAAAAATT+GGG - Chr4:8745425-8745444 None:intergenic 25.0%
! GTTCAACATAATTAAAAACC+GGG - Chr4:8744046-8744065 None:intergenic 25.0%
! GTTGATTAAATCAGATGATA+GGG - Chr4:8749947-8749966 None:intergenic 25.0%
! TAGCTAGAAGAAAAAAATTG+GGG - Chr4:8745424-8745443 None:intergenic 25.0%
! TAGGAGACAAATAGTTAAAA+AGG + Chr4:8748266-8748285 MsG0480018699.01.T01:intron 25.0%
! TATAAGTGAATAAACAAGCA+TGG + Chr4:8750415-8750434 MsG0480018699.01.T01:intron 25.0%
! TCAACTAAGTAGTTAGTTAT+CGG + Chr4:8748343-8748362 MsG0480018699.01.T01:intron 25.0%
! TGGACAATTACAAAATAAAC+GGG - Chr4:8751762-8751781 None:intergenic 25.0%
! TGTTAAGACATAATGATCTT+TGG + Chr4:8745601-8745620 MsG0480018699.01.T01:intron 25.0%
! TTACACAAATAAGCATGTAT+TGG - Chr4:8750460-8750479 None:intergenic 25.0%
! TTATTACTTCAAGCTAATTG+CGG + Chr4:8751547-8751566 MsG0480018699.01.T01:intron 25.0%
! TTCAACATAATTAAAAACCG+GGG - Chr4:8744045-8744064 None:intergenic 25.0%
! TTTAATCTTGACAATTCATG+TGG + Chr4:8751148-8751167 MsG0480018699.01.T01:intron 25.0%
! TTTCTCAACAAAACTTACAA+GGG + Chr4:8745665-8745684 MsG0480018699.01.T01:CDS 25.0%
!! AAAAAGAAGTTGCATTTTTG+CGG + Chr4:8749608-8749627 MsG0480018699.01.T01:intron 25.0%
!! AAAATCCATTCTGATTTTGT+TGG + Chr4:8745021-8745040 MsG0480018699.01.T01:intron 25.0%
!! AAACAATTCTGTTTTCAGAT+TGG + Chr4:8743912-8743931 MsG0480018699.01.T01:intron 25.0%
!! AGATTGTATTGGCATAAATT+TGG + Chr4:8746908-8746927 MsG0480018699.01.T01:intron 25.0%
!! AGGATTTACAGTGTATATTT+TGG + Chr4:8745283-8745302 MsG0480018699.01.T01:intron 25.0%
!! ATAACAGGAAGTATAAACTT+TGG + Chr4:8750730-8750749 MsG0480018699.01.T01:intron 25.0%
!! ATATATACAAAAGGATTGGT+GGG + Chr4:8748779-8748798 MsG0480018699.01.T01:intron 25.0%
!! ATATTGCGAAGAATCATTTT+GGG + Chr4:8752117-8752136 MsG0480018699.01.T01:intron 25.0%
!! CTAATATTTTGTAAGACTTG+TGG + Chr4:8749368-8749387 MsG0480018699.01.T01:intron 25.0%
!! GAACACATCTTTATTTCATT+AGG + Chr4:8747152-8747171 MsG0480018699.01.T01:intron 25.0%
!! GGATTTACAGTGTATATTTT+GGG + Chr4:8745284-8745303 MsG0480018699.01.T01:intron 25.0%
!! TACAATATTTGTTGGAATCT+AGG - Chr4:8750285-8750304 None:intergenic 25.0%
!! TATATTGCGAAGAATCATTT+TGG + Chr4:8752116-8752135 MsG0480018699.01.T01:intron 25.0%
!! TTCTTTTTCCATTTCTTTAG+TGG + Chr4:8746299-8746318 MsG0480018699.01.T01:intron 25.0%
!! TTTCTTGCTTTCTTTTTCTT+CGG + Chr4:8747085-8747104 MsG0480018699.01.T01:intron 25.0%
!! TTTTCAAAAACACCTTTACA+GGG - Chr4:8745183-8745202 None:intergenic 25.0%
!! TTTTCAGAGTTAAAATTAGG+AGG + Chr4:8745760-8745779 MsG0480018699.01.T01:intron 25.0%
!! TTTTCTCAACAAAACTTACA+AGG + Chr4:8745664-8745683 MsG0480018699.01.T01:CDS 25.0%
!!! ACGTTGCACTAATTTTAATA+TGG + Chr4:8749755-8749774 MsG0480018699.01.T01:intron 25.0%
!!! CTATTTCTTATCAAGGATTT+TGG - Chr4:8750959-8750978 None:intergenic 25.0%
!!! GTCTATTTGCTAATTTTAGA+TGG + Chr4:8744221-8744240 MsG0480018699.01.T01:intron 25.0%
!!! TCTTGCTTTTGTTTTATTAC+AGG + Chr4:8744772-8744791 MsG0480018699.01.T01:intron 25.0%
!!! TGTAAGTTTTGTTGAGAAAA+GGG - Chr4:8745664-8745683 None:intergenic 25.0%
!!! TTCTTTCTAGAATTATGCTA+AGG + Chr4:8746882-8746901 MsG0480018699.01.T01:intron 25.0%
!!! TTGTAAGTTTTGTTGAGAAA+AGG - Chr4:8745665-8745684 None:intergenic 25.0%
!!! TTTATTTTTAAGCATGTACC+TGG + Chr4:8748001-8748020 MsG0480018699.01.T01:intron 25.0%
!!! TTTCTATTTTCAAGATGTTC+GGG + Chr4:8745515-8745534 MsG0480018699.01.T01:intron 25.0%
AAACTTTATAAGCATTACCC+AGG + Chr4:8750537-8750556 MsG0480018699.01.T01:intron 30.0%
AAAGCAAGAAACTCTTACAA+TGG - Chr4:8747076-8747095 None:intergenic 30.0%
AAATAAAAGCAACCTAGAGA+AGG - Chr4:8752210-8752229 None:intergenic 30.0%
AACAGAAGCTGTAATTCTTA+AGG + Chr4:8745209-8745228 MsG0480018699.01.T01:intron 30.0%
AACATTGAAAGTTCAAAGCT+AGG + Chr4:8747466-8747485 MsG0480018699.01.T01:intron 30.0%
AAGTGAAACACAGTAAACAA+TGG + Chr4:8752064-8752083 MsG0480018699.01.T01:intron 30.0%
AATAGAACCCAGAAATTCAA+AGG + Chr4:8750002-8750021 MsG0480018699.01.T01:intron 30.0%
AATTGAAGAAGCAAGCATTA+AGG + Chr4:8743760-8743779 MsG0480018699.01.T01:five_prime_UTR 30.0%
AATTGTTTCCAAGATGAATC+TGG - Chr4:8743900-8743919 None:intergenic 30.0%
ACCCTGGATAATGATTAAAA+TGG - Chr4:8751886-8751905 None:intergenic 30.0%
ACTAGACCATTAATGGAAAA+AGG - Chr4:8752248-8752267 None:intergenic 30.0%
AGAATAAAGATTTGGCAGAT+AGG + Chr4:8747677-8747696 MsG0480018699.01.T01:intron 30.0%
AGCTAGAAGAAAAAAATTGG+GGG - Chr4:8745423-8745442 None:intergenic 30.0%
AGGAATGCTAAATTATCCAA+GGG + Chr4:8744901-8744920 MsG0480018699.01.T01:CDS 30.0%
ATAAAAGATTGTTGTCGTGT+AGG + Chr4:8751274-8751293 MsG0480018699.01.T01:CDS 30.0%
ATACACAATGATGAGAAACA+TGG - Chr4:8749654-8749673 None:intergenic 30.0%
ATGATATCTTTATGAACTGC+TGG + Chr4:8749199-8749218 MsG0480018699.01.T01:intron 30.0%
ATTAGAGTTTAAGTAACAGG+GGG - Chr4:8749684-8749703 None:intergenic 30.0%
ATTATTCTTGAGACAGAAGA+CGG - Chr4:8752529-8752548 None:intergenic 30.0%
ATTCAACATGATTTACACCA+AGG + Chr4:8749887-8749906 MsG0480018699.01.T01:CDS 30.0%
ATTTCATTAGGATGAGATTC+AGG + Chr4:8747164-8747183 MsG0480018699.01.T01:intron 30.0%
CAAATATTCTGTGTATGTTG+GGG - Chr4:8751244-8751263 None:intergenic 30.0%
CAACATACACAGAATATTTG+GGG + Chr4:8751244-8751263 MsG0480018699.01.T01:intron 30.0%
CAGAGGGAATAAAAGAATAA+GGG - Chr4:8746260-8746279 None:intergenic 30.0%
CATTCTGTGATTTCTATTAG+AGG + Chr4:8747130-8747149 MsG0480018699.01.T01:intron 30.0%
CCAAATATTCTGTGTATGTT+GGG - Chr4:8751245-8751264 None:intergenic 30.0%
CCAACATACACAGAATATTT+GGG + Chr4:8751243-8751262 MsG0480018699.01.T01:intron 30.0%
CCCTGGATAATGATTAAAAT+GGG - Chr4:8751885-8751904 None:intergenic 30.0%
CGTAGCTAGAAGAAAAAAAT+TGG - Chr4:8745426-8745445 None:intergenic 30.0%
CTCTAATAGAAATCACAGAA+TGG - Chr4:8747132-8747151 None:intergenic 30.0%
GATAATGATTAAAATGGGAC+TGG - Chr4:8751880-8751899 None:intergenic 30.0%
GATTGGAAAGTTAAATCTAG+AGG - Chr4:8748748-8748767 None:intergenic 30.0%
GGAAAATTAAGGTTAGATTG+GGG + Chr4:8748411-8748430 MsG0480018699.01.T01:intron 30.0%
GGAAATTCTACTACAAAGAA+TGG - Chr4:8748037-8748056 None:intergenic 30.0%
GGACAATTACAAAATAAACG+GGG - Chr4:8751761-8751780 None:intergenic 30.0%
GGGAAACAATTTACATTCTT+CGG - Chr4:8747026-8747045 None:intergenic 30.0%
GGTTAGAAGAAATGATGAAA+GGG + Chr4:8747893-8747912 MsG0480018699.01.T01:intron 30.0%
GGTTGATTAAATCAGATGAT+AGG - Chr4:8749948-8749967 None:intergenic 30.0%
GTTAGAAGAAATGATGAAAG+GGG + Chr4:8747894-8747913 MsG0480018699.01.T01:intron 30.0%
TAAGATATTCATCCTTCTCT+AGG + Chr4:8752195-8752214 MsG0480018699.01.T01:intron 30.0%
TACTTAGTTGAATCAGTTAG+AGG - Chr4:8748334-8748353 None:intergenic 30.0%
TAGATACCATAATAACGAGA+AGG - Chr4:8751703-8751722 None:intergenic 30.0%
TAGGAATGCTAAATTATCCA+AGG + Chr4:8744900-8744919 MsG0480018699.01.T01:CDS 30.0%
TAGTACTAGTTAACATTGGT+TGG + Chr4:8749524-8749543 MsG0480018699.01.T01:intron 30.0%
TATATGCTGATAATCCAGAA+TGG + Chr4:8746827-8746846 MsG0480018699.01.T01:CDS 30.0%
TCAGAGGGAATAAAAGAATA+AGG - Chr4:8746261-8746280 None:intergenic 30.0%
TCATAATTCATACAACCATC+TGG + Chr4:8745254-8745273 MsG0480018699.01.T01:intron 30.0%
TGGGTAATGCTTATAAAGTT+TGG - Chr4:8750538-8750557 None:intergenic 30.0%
TGGTCTGCATTCTTATAATT+TGG - Chr4:8747751-8747770 None:intergenic 30.0%
TGGTTAGAAGAAATGATGAA+AGG + Chr4:8747892-8747911 MsG0480018699.01.T01:intron 30.0%
TGGTTAGTACTAGTTAACAT+TGG + Chr4:8749520-8749539 MsG0480018699.01.T01:intron 30.0%
TGTATACACAGAATAGTACA+TGG - Chr4:8745931-8745950 None:intergenic 30.0%
TTAATGAATTGCCTTCAAGT+GGG + Chr4:8746712-8746731 MsG0480018699.01.T01:intron 30.0%
TTAGTGTACCAAATTGGAAA+CGG + Chr4:8752332-8752351 MsG0480018699.01.T01:intron 30.0%
TTCTATAAACATGTATTCGG+TGG - Chr4:8746554-8746573 None:intergenic 30.0%
TTCTCAACAAAACTTACAAG+GGG + Chr4:8745666-8745685 MsG0480018699.01.T01:CDS 30.0%
TTCTGGATTATCAGCATATA+TGG - Chr4:8746827-8746846 None:intergenic 30.0%
TTGCAATTTGCAAAACTCAT+GGG - Chr4:8744016-8744035 None:intergenic 30.0%
TTTAATGAATTGCCTTCAAG+TGG + Chr4:8746711-8746730 MsG0480018699.01.T01:intron 30.0%
TTTGCAATTTGCAAAACTCA+TGG - Chr4:8744017-8744036 None:intergenic 30.0%
! AAAAGAATAAGGGTGTGTTT+GGG - Chr4:8746250-8746269 None:intergenic 30.0%
! AAGTTTGTTCAGAGTTGTTT+CGG - Chr4:8750162-8750181 None:intergenic 30.0%
! AATTGTGTACTAACTTTTCC+AGG - Chr4:8749426-8749445 None:intergenic 30.0%
! ATAACGAGAAGGTATAATAG+AGG - Chr4:8751692-8751711 None:intergenic 30.0%
! ATTACCTGCTGTACATTTTT+CGG + Chr4:8747565-8747584 MsG0480018699.01.T01:intron 30.0%
! ATTTTCTCTTAGGGTATGTT+TGG + Chr4:8746026-8746045 MsG0480018699.01.T01:intron 30.0%
! GATACTCCTTTTTCCATTAA+TGG + Chr4:8752239-8752258 MsG0480018699.01.T01:intron 30.0%
! GTAATCACATGCATTAGTTT+CGG + Chr4:8744591-8744610 MsG0480018699.01.T01:intron 30.0%
! GTTCTAAACTACTCTGTTAA+TGG + Chr4:8748075-8748094 MsG0480018699.01.T01:intron 30.0%
! GTTTTCAAAAACACCTTTAC+AGG - Chr4:8745184-8745203 None:intergenic 30.0%
! TAAAAGAATAAGGGTGTGTT+TGG - Chr4:8746251-8746270 None:intergenic 30.0%
! TAAGTAGTTAGTTATCGGTT+TGG + Chr4:8748348-8748367 MsG0480018699.01.T01:intron 30.0%
! TAGTTAAAAAGGTGTACACT+AGG + Chr4:8748277-8748296 MsG0480018699.01.T01:intron 30.0%
! TATATACAAAAGGATTGGTG+GGG + Chr4:8748780-8748799 MsG0480018699.01.T01:intron 30.0%
! TATGTTTGGAAAGCATAGAA+AGG - Chr4:8751402-8751421 None:intergenic 30.0%
! TATTGCGAAGAATCATTTTG+GGG + Chr4:8752118-8752137 MsG0480018699.01.T01:intron 30.0%
! TCGAAGTCAAAGTTCTAATA+TGG - Chr4:8750758-8750777 None:intergenic 30.0%
! TTTGTCTGCAACAGTTTTTA+GGG + Chr4:8752437-8752456 MsG0480018699.01.T01:intron 30.0%
!! AAAATAAAGTACTGCATGGT+AGG + Chr4:8748247-8748266 MsG0480018699.01.T01:intron 30.0%
!! AATCATTTTGGGGATAGTTA+TGG + Chr4:8752128-8752147 MsG0480018699.01.T01:intron 30.0%
!! AATTGGATTGGCATAGTTTA+TGG + Chr4:8747266-8747285 MsG0480018699.01.T01:intron 30.0%
!! ATCATTTTGGGGATAGTTAT+GGG + Chr4:8752129-8752148 MsG0480018699.01.T01:intron 30.0%
!! CCCATTTTAATCATTATCCA+GGG + Chr4:8751882-8751901 MsG0480018699.01.T01:intron 30.0%
!! TCAACAAAAAGTTGATGACT+TGG + Chr4:8749125-8749144 MsG0480018699.01.T01:CDS 30.0%
!! TCCCATTTTAATCATTATCC+AGG + Chr4:8751881-8751900 MsG0480018699.01.T01:intron 30.0%
!! TTCTTCACTTTTACAGAGTT+AGG + Chr4:8745319-8745338 MsG0480018699.01.T01:intron 30.0%
!!! AGAGAGTATTTTTTGTCTGT+AGG + Chr4:8752153-8752172 MsG0480018699.01.T01:intron 30.0%
!!! ATGAAGAACAGTTTTTTCTC+TGG + Chr4:8747641-8747660 MsG0480018699.01.T01:intron 30.0%
!!! GTAAAGGTGTTTTTGAAAAC+AGG + Chr4:8745184-8745203 MsG0480018699.01.T01:intron 30.0%
AAACAGAAGACGCAAACAAA+AGG - Chr4:8746359-8746378 None:intergenic 35.0%
AACAAGGCAGTATATGCTAA+GGG - Chr4:8752402-8752421 None:intergenic 35.0%
AACACATGTATAGGAACTCA+GGG + Chr4:8750379-8750398 MsG0480018699.01.T01:intron 35.0%
AACAGTATGATGATCAGTCA+AGG - Chr4:8748503-8748522 None:intergenic 35.0%
AACTGATGAAAGCAGCATTA+GGG - Chr4:8751912-8751931 None:intergenic 35.0%
AAGAATGGGTATAAAACACC+AGG - Chr4:8748022-8748041 None:intergenic 35.0%
AAGACTTGTGGCATAGATTT+AGG + Chr4:8749380-8749399 MsG0480018699.01.T01:intron 35.0%
AAGTGCCAACAAAATCAGAA+TGG - Chr4:8745029-8745048 None:intergenic 35.0%
AATATCCTGGAAGGTAGAAT+AGG - Chr4:8748189-8748208 None:intergenic 35.0%
AATTGGGTCAACACATGTAT+AGG + Chr4:8750370-8750389 MsG0480018699.01.T01:intron 35.0%
ACAATTCATGTGGAATCACA+TGG + Chr4:8751158-8751177 MsG0480018699.01.T01:intron 35.0%
ACAGTATATGCATGTGTAAC+AGG + Chr4:8746738-8746757 MsG0480018699.01.T01:intron 35.0%
ACAGTCATAAATCGAGATCT+TGG + Chr4:8752571-8752590 MsG0480018699.01.T01:intron 35.0%
ACCACTGTAACATCTGATAT+AGG + Chr4:8747208-8747227 MsG0480018699.01.T01:CDS 35.0%
ACCTCGACTTTGAATAACAA+CGG - Chr4:8744194-8744213 None:intergenic 35.0%
ACGTCTTCCATTAGAATTGT+TGG + Chr4:8744421-8744440 MsG0480018699.01.T01:intron 35.0%
AGAAAATTGGCCAAATAGAG+TGG - Chr4:8745500-8745519 None:intergenic 35.0%
AGATTCCATTGCAGAAAAAC+AGG + Chr4:8746988-8747007 MsG0480018699.01.T01:CDS 35.0%
AGCTCAATTGGCTAATTCTA+TGG - Chr4:8752037-8752056 None:intergenic 35.0%
AGTGCAAAACATGTGATCTT+TGG + Chr4:8751119-8751138 MsG0480018699.01.T01:intron 35.0%
AGTGTCACCTTTGAATTTCT+GGG - Chr4:8750012-8750031 None:intergenic 35.0%
AGTTGTGAAACCACTCTATT+TGG + Chr4:8745487-8745506 MsG0480018699.01.T01:intron 35.0%
ATACAACCATCTGGATGATA+AGG + Chr4:8745263-8745282 MsG0480018699.01.T01:intron 35.0%
ATAGAAATCACAGAATGGAC+AGG - Chr4:8747127-8747146 None:intergenic 35.0%
ATTTCCAGTTCTTATCAGCT+TGG + Chr4:8748051-8748070 MsG0480018699.01.T01:intron 35.0%
CAATTTATTCCATCAGCCTT+CGG - Chr4:8750919-8750938 None:intergenic 35.0%
CAGAAGACACATGTACTTTA+AGG - Chr4:8747599-8747618 None:intergenic 35.0%
CAGAGAAACTAGACCATTAA+TGG - Chr4:8752255-8752274 None:intergenic 35.0%
CAGTATATGCATGTGTAACA+GGG + Chr4:8746739-8746758 MsG0480018699.01.T01:intron 35.0%
CATGTACAAATGCAGAATAG+AGG - Chr4:8745820-8745839 None:intergenic 35.0%
CATTACGTCATTTCTGTTAC+TGG + Chr4:8748533-8748552 MsG0480018699.01.T01:intron 35.0%
CCACTGTAACATCTGATATA+GGG + Chr4:8747209-8747228 MsG0480018699.01.T01:CDS 35.0%
CCCAAATATTCTGTGTATGT+TGG - Chr4:8751246-8751265 None:intergenic 35.0%
CCCAACATACACAGAATATT+TGG + Chr4:8751242-8751261 MsG0480018699.01.T01:intron 35.0%
CCTTGATAAGAAATAGAGGA+GGG + Chr4:8750963-8750982 MsG0480018699.01.T01:intron 35.0%
CTCTACTTAGGCAAATTTGT+AGG + Chr4:8750840-8750859 MsG0480018699.01.T01:intron 35.0%
CTCTATTCTGCATTTGTACA+TGG + Chr4:8745818-8745837 MsG0480018699.01.T01:intron 35.0%
CTGTTTAATCACAACTCTTC+AGG + Chr4:8749043-8749062 MsG0480018699.01.T01:intron 35.0%
GAAATGTTCTTATGTGGCTA+GGG + Chr4:8751960-8751979 MsG0480018699.01.T01:intron 35.0%
GAAGCAGGAAAGGAAAATTA+AGG + Chr4:8748400-8748419 MsG0480018699.01.T01:intron 35.0%
GAAGCGATTCAGAAGAAATT+AGG + Chr4:8744881-8744900 MsG0480018699.01.T01:CDS 35.0%
GAGAAATTAGATGTTCACAG+AGG + Chr4:8748299-8748318 MsG0480018699.01.T01:intron 35.0%
GATGAAAGGGGAAAAAACAT+GGG + Chr4:8747906-8747925 MsG0480018699.01.T01:intron 35.0%
GCACTAGATCGGAAAATATA+GGG - Chr4:8749305-8749324 None:intergenic 35.0%
GCAGAAATTGCTAAGTTTCT+GGG + Chr4:8746418-8746437 MsG0480018699.01.T01:CDS 35.0%
GCTCAATTGGCTAATTCTAT+GGG - Chr4:8752036-8752055 None:intergenic 35.0%
GGCATACAAAATGCTTCTAA+AGG + Chr4:8751373-8751392 MsG0480018699.01.T01:CDS 35.0%
GGGGAAATCCATAAGATAAT+GGG - Chr4:8751742-8751761 None:intergenic 35.0%
GGGGAAATCTGTTTAAAAGT+TGG - Chr4:8746328-8746347 None:intergenic 35.0%
GGTCTAATGCTGATGAAATA+AGG + Chr4:8750628-8750647 MsG0480018699.01.T01:intron 35.0%
GTAAATCCTTATCATCCAGA+TGG - Chr4:8745272-8745291 None:intergenic 35.0%
GTGCAAAACATGTGATCTTT+GGG + Chr4:8751120-8751139 MsG0480018699.01.T01:intron 35.0%
GTGTAAAGTCTATATAGCAC+CGG - Chr4:8744654-8744673 None:intergenic 35.0%
GTTAGACTTCTTAAGAACTC+AGG + Chr4:8750867-8750886 MsG0480018699.01.T01:intron 35.0%
TAACAAGGCAGTATATGCTA+AGG - Chr4:8752403-8752422 None:intergenic 35.0%
TAAGGAGACCATAAATATCC+TGG - Chr4:8748202-8748221 None:intergenic 35.0%
TAGTGTACCAAATTGGAAAC+GGG + Chr4:8752333-8752352 MsG0480018699.01.T01:intron 35.0%
TATACCGAAAAATGTACAGC+AGG - Chr4:8747572-8747591 None:intergenic 35.0%
TATACTGTTTACCCACTTGA+AGG - Chr4:8746726-8746745 None:intergenic 35.0%
TCCTTGATAAGAAATAGAGG+AGG + Chr4:8750962-8750981 MsG0480018699.01.T01:intron 35.0%
TCGTCTAATTGTAGATCTAG+TGG + Chr4:8746795-8746814 MsG0480018699.01.T01:CDS 35.0%
TCTAATTGTAGATCTAGTGG+AGG + Chr4:8746798-8746817 MsG0480018699.01.T01:CDS 35.0%
TCTACCTTCCAGGATATTTA+TGG + Chr4:8748191-8748210 MsG0480018699.01.T01:intron 35.0%
TCTTATGCTAGACAACTCTT+GGG + Chr4:8747787-8747806 MsG0480018699.01.T01:CDS 35.0%
TGAAATGTTCTTATGTGGCT+AGG + Chr4:8751959-8751978 MsG0480018699.01.T01:intron 35.0%
TGACATGACAACCATAATTG+AGG + Chr4:8745132-8745151 MsG0480018699.01.T01:intron 35.0%
TGACTTAAAACGTGCAGATT+TGG + Chr4:8746396-8746415 MsG0480018699.01.T01:intron 35.0%
TGATGAAAGGGGAAAAAACA+TGG + Chr4:8747905-8747924 MsG0480018699.01.T01:intron 35.0%
TGCACTAGATCGGAAAATAT+AGG - Chr4:8749306-8749325 None:intergenic 35.0%
TGTACTTACAACAGGCTATT+AGG + Chr4:8745628-8745647 MsG0480018699.01.T01:intron 35.0%
TGTAGCACCAACAATTCTAA+TGG - Chr4:8744431-8744450 None:intergenic 35.0%
TTAAACCTATTCTACCTTCC+AGG + Chr4:8748181-8748200 MsG0480018699.01.T01:intron 35.0%
TTATGTGTAGCTTCACTTCT+TGG - Chr4:8751465-8751484 None:intergenic 35.0%
TTCTCGTTATAAGAGCTTTC+TGG - Chr4:8747503-8747522 None:intergenic 35.0%
TTCTCTGCTATTGAGTGAAT+CGG + Chr4:8752268-8752287 MsG0480018699.01.T01:intron 35.0%
TTGAATAACAACGGACAACT+TGG - Chr4:8744185-8744204 None:intergenic 35.0%
TTTGTGTACAACTCAAGACA+AGG - Chr4:8748712-8748731 None:intergenic 35.0%
TTTGTTGGCACTTATGAACA+AGG + Chr4:8745036-8745055 MsG0480018699.01.T01:intron 35.0%
! AAGAGTGTGTAACACACATA+TGG - Chr4:8747771-8747790 None:intergenic 35.0%
! ACATGTGTTGACCCAATTAT+TGG - Chr4:8750368-8750387 None:intergenic 35.0%
! ATATACAAAAGGATTGGTGG+GGG + Chr4:8748781-8748800 MsG0480018699.01.T01:intron 35.0%
! CATGTGTTGACCCAATTATT+GGG - Chr4:8750367-8750386 None:intergenic 35.0%
! GCTAATTTTAGATGGCGAAT+TGG + Chr4:8744229-8744248 MsG0480018699.01.T01:intron 35.0%
! GTTTGTCTGCAACAGTTTTT+AGG + Chr4:8752436-8752455 MsG0480018699.01.T01:intron 35.0%
! TATGTTTGGATGGAGAGTTT+TGG + Chr4:8746040-8746059 MsG0480018699.01.T01:intron 35.0%
! TCATTTTGTGTCTAGTAGTC+AGG + Chr4:8749329-8749348 MsG0480018699.01.T01:intron 35.0%
! TCTTGCATCGGTATCATATT+AGG + Chr4:8747232-8747251 MsG0480018699.01.T01:intron 35.0%
! TGCTTGTTAGTGTACCAAAT+TGG + Chr4:8752326-8752345 MsG0480018699.01.T01:intron 35.0%
! TTCTTTTATTCCCTCTGATC+TGG + Chr4:8746263-8746282 MsG0480018699.01.T01:intron 35.0%
! TTGGTGTTTGTACTTACAAC+AGG + Chr4:8745620-8745639 MsG0480018699.01.T01:intron 35.0%
! TTTGGAGTAGTTGAAATAGG+AGG + Chr4:8748366-8748385 MsG0480018699.01.T01:intron 35.0%
!! AATCTATGAAGCACTGACAT+CGG + Chr4:8744300-8744319 MsG0480018699.01.T01:intron 35.0%
!! ATCTGCACGTTTTAAGTCAT+AGG - Chr4:8746395-8746414 None:intergenic 35.0%
!! CATTATTTTGCCAGATCAGA+GGG - Chr4:8746276-8746295 None:intergenic 35.0%
!! GGTAATGGTTTTCTTTTGCA+TGG + Chr4:8748979-8748998 MsG0480018699.01.T01:intron 35.0%
!! TCATTATTTTGCCAGATCAG+AGG - Chr4:8746277-8746296 None:intergenic 35.0%
!! TGAATGTTCTAGCTGTTTCT+AGG - Chr4:8749872-8749891 None:intergenic 35.0%
!! TTCACTTTTACAGAGTTAGG+AGG + Chr4:8745322-8745341 MsG0480018699.01.T01:intron 35.0%
!!! TTTTGAAACCTTCCCTGTAA+AGG + Chr4:8745168-8745187 MsG0480018699.01.T01:intron 35.0%
AACAACGGACAACTTGGTTA+AGG - Chr4:8744179-8744198 None:intergenic 40.0%
AACACCAAGCTGATAAGAAC+TGG - Chr4:8748058-8748077 None:intergenic 40.0%
ACAGTTCACAGCCTCAATTA+TGG - Chr4:8745146-8745165 None:intergenic 40.0%
ACTTCTTAAGAACTCAGGAC+TGG + Chr4:8750872-8750891 MsG0480018699.01.T01:intron 40.0%
AGAAAAGCTTCGTCAAACCT+TGG - Chr4:8749907-8749926 None:intergenic 40.0%
AGAAGGGATGAGTCATTTAG+TGG + Chr4:8747929-8747948 MsG0480018699.01.T01:intron 40.0%
AGACAACTCTTGGGAAACAA+GGG + Chr4:8747796-8747815 MsG0480018699.01.T01:CDS 40.0%
AGAGTTAGGAGGTGAAAGTA+CGG + Chr4:8745333-8745352 MsG0480018699.01.T01:intron 40.0%
AGTTAAATCTAGAGGTGAGC+AGG - Chr4:8748740-8748759 None:intergenic 40.0%
ATACATCTGACATTCTGCAG+GGG - Chr4:8751794-8751813 None:intergenic 40.0%
ATAGTAGTTTACTCCTTGCC+AGG - Chr4:8748874-8748893 None:intergenic 40.0%
ATCAACTAGAGATATGGCCT+GGG - Chr4:8750557-8750576 None:intergenic 40.0%
ATCTATCAAGTGGATGTCCT+TGG - Chr4:8746972-8746991 None:intergenic 40.0%
ATGACTAACTTGAATGGCGT+CGG - Chr4:8746464-8746483 None:intergenic 40.0%
ATGCTGATAATCCAGAATGG+AGG + Chr4:8746830-8746849 MsG0480018699.01.T01:CDS 40.0%
ATGTATGCATGCTTGCATCT+AGG + Chr4:8751808-8751827 MsG0480018699.01.T01:intron 40.0%
ATGTCTTTCTCATGCAGAGT+TGG + Chr4:8745967-8745986 MsG0480018699.01.T01:intron 40.0%
ATTCTAATGGAAGACGTGTC+TGG - Chr4:8744418-8744437 None:intergenic 40.0%
CAAAAACACCTTTACAGGGA+AGG - Chr4:8745179-8745198 None:intergenic 40.0%
CAACAAATCTCTTCACGTTC+AGG + Chr4:8750655-8750674 MsG0480018699.01.T01:intron 40.0%
CAACACATGTATAGGAACTC+AGG + Chr4:8750378-8750397 MsG0480018699.01.T01:intron 40.0%
CAGCATTGCGGTTACAAAAT+TGG - Chr4:8743836-8743855 None:intergenic 40.0%
CAGTGTCACCTTTGAATTTC+TGG - Chr4:8750013-8750032 None:intergenic 40.0%
CATACATCTGACATTCTGCA+GGG - Chr4:8751795-8751814 None:intergenic 40.0%
CCCTATAGAGGTTGTTAAAC+CGG + Chr4:8744812-8744831 MsG0480018699.01.T01:five_prime_UTR 40.0%
CCCTATATCAGATGTTACAG+TGG - Chr4:8747212-8747231 None:intergenic 40.0%
CCGGTTTAACAACCTCTATA+GGG - Chr4:8744815-8744834 None:intergenic 40.0%
CGGGGAAATCCATAAGATAA+TGG - Chr4:8751743-8751762 None:intergenic 40.0%
CGGTTTAACAACCTCTATAG+GGG - Chr4:8744814-8744833 None:intergenic 40.0%
CTAAAGGAGTTGAGAAGTCA+AGG + Chr4:8748834-8748853 MsG0480018699.01.T01:intron 40.0%
CTAACATTCACTCCTCTTAC+TGG - Chr4:8744457-8744476 None:intergenic 40.0%
CTAAGAACCCGTTTCCAATT+TGG - Chr4:8752343-8752362 None:intergenic 40.0%
CTCCATGCCAGCAAATAAAA+GGG - Chr4:8744945-8744964 None:intergenic 40.0%
CTCTTAATGACTAACCCTCT+AGG + Chr4:8750230-8750249 MsG0480018699.01.T01:intron 40.0%
CTCTTATGCTAGACAACTCT+TGG + Chr4:8747786-8747805 MsG0480018699.01.T01:CDS 40.0%
CTGCAATGGAATCTATCAAG+TGG - Chr4:8746982-8747001 None:intergenic 40.0%
GAACTGATGAAAGCAGCATT+AGG - Chr4:8751913-8751932 None:intergenic 40.0%
GAAGATGGCATCAAAGCAAA+TGG + Chr4:8744859-8744878 MsG0480018699.01.T01:exon 40.0%
GAAGGGATGAGTCATTTAGT+GGG + Chr4:8747930-8747949 MsG0480018699.01.T01:intron 40.0%
GAGACCATAAATATCCTGGA+AGG - Chr4:8748198-8748217 None:intergenic 40.0%
GCAAATTGCAAAAAAGACCC+CGG + Chr4:8744025-8744044 MsG0480018699.01.T01:intron 40.0%
GCACTTTCAGTCACTGTTTA+GGG - Chr4:8751104-8751123 None:intergenic 40.0%
GCATGCTTATAATCCAGATG+AGG + Chr4:8749800-8749819 MsG0480018699.01.T01:intron 40.0%
GGCAGAAATTGCTAAGTTTC+TGG + Chr4:8746417-8746436 MsG0480018699.01.T01:CDS 40.0%
GGTGCAAATACGCTCAATTA+AGG - Chr4:8745545-8745564 None:intergenic 40.0%
GTATGCCTCCAATAATCGAT+TGG - Chr4:8751360-8751379 None:intergenic 40.0%
TAGAAGCTTGTAGAAGCTGT+AGG - Chr4:8750320-8750339 None:intergenic 40.0%
TAGACAACTCTTGGGAAACA+AGG + Chr4:8747795-8747814 MsG0480018699.01.T01:CDS 40.0%
TAGAGGTAGACTGAAGTGAT+AGG - Chr4:8747315-8747334 None:intergenic 40.0%
TATAGAGGTTGTTAAACCGG+TGG + Chr4:8744815-8744834 MsG0480018699.01.T01:five_prime_UTR 40.0%
TCCCACATCAACTAGAGATA+TGG - Chr4:8750563-8750582 None:intergenic 40.0%
TCCTCATCTAGCATACAAGT+CGG - Chr4:8750802-8750821 None:intergenic 40.0%
TCTCTGCTATTGAGTGAATC+GGG + Chr4:8752269-8752288 MsG0480018699.01.T01:intron 40.0%
TCTCTTAGGGTATGTTTGGA+TGG + Chr4:8746030-8746049 MsG0480018699.01.T01:intron 40.0%
TCTGATATAGGGTCTTGCAT+CGG + Chr4:8747220-8747239 MsG0480018699.01.T01:CDS 40.0%
TGACATTCACATGTAGACAC+TGG + Chr4:8744537-8744556 MsG0480018699.01.T01:intron 40.0%
TGCACTTTCAGTCACTGTTT+AGG - Chr4:8751105-8751124 None:intergenic 40.0%
TGCTAAGGCAGAGATTGTAT+TGG + Chr4:8746897-8746916 MsG0480018699.01.T01:intron 40.0%
TGGATTGTAGAAAAATGCGG+TGG + Chr4:8750688-8750707 MsG0480018699.01.T01:intron 40.0%
TTACAGGACCAATAACCTAG+AGG + Chr4:8744788-8744807 MsG0480018699.01.T01:intron 40.0%
TTAGATTGGGGAGAGAATCA+GGG + Chr4:8748423-8748442 MsG0480018699.01.T01:intron 40.0%
TTCCAAGATGAATCTGGATC+TGG - Chr4:8743894-8743913 None:intergenic 40.0%
TTGAAATAGGAGGCGGAAAA+TGG + Chr4:8748376-8748395 MsG0480018699.01.T01:intron 40.0%
TTGCCTAAGTAGAGCTTATG+AGG - Chr4:8750834-8750853 None:intergenic 40.0%
TTTCGGACGTGTTGAATACA+GGG + Chr4:8744608-8744627 MsG0480018699.01.T01:intron 40.0%
! AAACCTATTCCGTTTTCTGC+CGG - Chr4:8747824-8747843 None:intergenic 40.0%
! AACAACCTTGCTATGTTGCA+AGG + Chr4:8747852-8747871 MsG0480018699.01.T01:intron 40.0%
! ACCGGTTTAACAACCTCTAT+AGG - Chr4:8744816-8744835 None:intergenic 40.0%
! CCCTCCTCTATTTCTTATCA+AGG - Chr4:8750966-8750985 None:intergenic 40.0%
! CGGTTTGGAGTAGTTGAAAT+AGG + Chr4:8748363-8748382 MsG0480018699.01.T01:intron 40.0%
! CGTCATTTCTGTTACTGGTT+TGG + Chr4:8748538-8748557 MsG0480018699.01.T01:intron 40.0%
! GCCATATCTCTAGTTGATGT+GGG + Chr4:8750559-8750578 MsG0480018699.01.T01:intron 40.0%
! GTGTTATTCCACACGATGTT+TGG - Chr4:8748453-8748472 None:intergenic 40.0%
! TATACAAAAGGATTGGTGGG+GGG + Chr4:8748782-8748801 MsG0480018699.01.T01:intron 40.0%
! TCCGTTGTTATTCAAAGTCG+AGG + Chr4:8744190-8744209 MsG0480018699.01.T01:intron 40.0%
! TTAGACGAAGCATTTCAGTG+CGG - Chr4:8746783-8746802 None:intergenic 40.0%
!! AGCATACAAGTCGGTTTTGT+AGG - Chr4:8750793-8750812 None:intergenic 40.0%
!! GCATACAAGTCGGTTTTGTA+GGG - Chr4:8750792-8750811 None:intergenic 40.0%
!! GTGTGTGTGTGTGTTTTGAA+TGG - Chr4:8748911-8748930 None:intergenic 40.0%
!! GTTGGTAGCCACTAAAGAAA+TGG - Chr4:8746310-8746329 None:intergenic 40.0%
!! TTGAGCCTGTTTTTCTGCAA+TGG - Chr4:8746996-8747015 None:intergenic 40.0%
!! TTTCTATAGTGTTGACGAGC+AGG + Chr4:8746943-8746962 MsG0480018699.01.T01:intron 40.0%
!! TTTGGATCCTCTGAAACATC+AGG + Chr4:8752499-8752518 MsG0480018699.01.T01:intron 40.0%
!!! TTTGGATGGAGAGTTTTGGA+GGG + Chr4:8746044-8746063 MsG0480018699.01.T01:intron 40.0%
!!! TTTTTTGCTTGCAGAGATGC+TGG + Chr4:8748118-8748137 MsG0480018699.01.T01:intron 40.0%
AAAAGAGAGGGAAGCCTAGA+GGG - Chr4:8750198-8750217 None:intergenic 45.0%
AAAGAAGAGCCACTCGAGAA+GGG - Chr4:8744975-8744994 None:intergenic 45.0%
AAGCTGCTCTTGTGTGGATT+GGG + Chr4:8750341-8750360 MsG0480018699.01.T01:intron 45.0%
AAGTAGAGCTTATGAGGCTC+AGG - Chr4:8750828-8750847 None:intergenic 45.0%
AATCTCTTCACGTTCAGGAC+TGG + Chr4:8750660-8750679 MsG0480018699.01.T01:intron 45.0%
ACCAGCTGCCAATCGATTAT+TGG + Chr4:8751349-8751368 MsG0480018699.01.T01:CDS 45.0%
ACCTCCATCATATGTGTCCA+TGG - Chr4:8751308-8751327 None:intergenic 45.0%
AGAGAAGTTCTCTCTGGTCT+AGG - Chr4:8750139-8750158 None:intergenic 45.0%
AGAGATCTTGGCCCAATAAC+AGG + Chr4:8750715-8750734 MsG0480018699.01.T01:intron 45.0%
AGATGGCAATGCTAGACGAA+AGG - Chr4:8751060-8751079 None:intergenic 45.0%
AGCTGCCAATCGATTATTGG+AGG + Chr4:8751352-8751371 MsG0480018699.01.T01:CDS 45.0%
AGGAGGATTAGGAGGGAAAA+TGG + Chr4:8747872-8747891 MsG0480018699.01.T01:intron 45.0%
AGGCGCATGCATATGCAAAA+AGG + Chr4:8751828-8751847 MsG0480018699.01.T01:intron 45.0%
AGGGGAAAAAACATGGGAGA+AGG + Chr4:8747912-8747931 MsG0480018699.01.T01:intron 45.0%
ATCAGGAACAACCTCCATTC+TGG - Chr4:8746844-8746863 None:intergenic 45.0%
ATCCTCCTTGCAACATAGCA+AGG - Chr4:8747860-8747879 None:intergenic 45.0%
ATCTCAACTGCGGGAACATT+TGG + Chr4:8749839-8749858 MsG0480018699.01.T01:CDS 45.0%
ATCTGTGTCTGTAGCTTACG+AGG + Chr4:8744277-8744296 MsG0480018699.01.T01:intron 45.0%
ATGAATCTGGATCTGGTCTG+AGG - Chr4:8743887-8743906 None:intergenic 45.0%
ATGCAGCAAAGACAGCATTG+CGG - Chr4:8743848-8743867 None:intergenic 45.0%
ATGCATGTGTAACAGGGACA+TGG + Chr4:8746745-8746764 MsG0480018699.01.T01:intron 45.0%
ATGGAGGTTCCACAACTACA+TGG + Chr4:8751320-8751339 MsG0480018699.01.T01:CDS 45.0%
ATGTTCACGAGCAATGGAAG+CGG - Chr4:8752605-8752624 None:intergenic 45.0%
ATGTTGCAAGGAGGATTAGG+AGG + Chr4:8747864-8747883 MsG0480018699.01.T01:intron 45.0%
CACACACTCACACACACAAA+AGG + Chr4:8748932-8748951 MsG0480018699.01.T01:intron 45.0%
CACTTTCACTGCAGCTCAAT+TGG - Chr4:8752049-8752068 None:intergenic 45.0%
CAGCTCAATTAGCTGCAATG+TGG + Chr4:8752093-8752112 MsG0480018699.01.T01:intron 45.0%
CATCAACTAGAGATATGGCC+TGG - Chr4:8750558-8750577 None:intergenic 45.0%
CTGGTACTCTTCAACTTTGC+CGG + Chr4:8751623-8751642 MsG0480018699.01.T01:intron 45.0%
GACCAGATCCAGATTCATCT+TGG + Chr4:8743889-8743908 MsG0480018699.01.T01:intron 45.0%
GACTGAATCTGAACATCTGC+GGG - Chr4:8747046-8747065 None:intergenic 45.0%
GAGCCTCATAAGCTCTACTT+AGG + Chr4:8750828-8750847 MsG0480018699.01.T01:intron 45.0%
GCAGGACTAATCAATCTACC+TGG + Chr4:8749405-8749424 MsG0480018699.01.T01:intron 45.0%
GCATACATCTGACATTCTGC+AGG - Chr4:8751796-8751815 None:intergenic 45.0%
GCGAGTCTCTTAGATTCTGT+AGG - Chr4:8752465-8752484 None:intergenic 45.0%
GCTATGTTGCAAGGAGGATT+AGG + Chr4:8747861-8747880 MsG0480018699.01.T01:intron 45.0%
GCTCCATGCCAGCAAATAAA+AGG - Chr4:8744946-8744965 None:intergenic 45.0%
GGAAAATGGTGAAGCAGGAA+AGG + Chr4:8748390-8748409 MsG0480018699.01.T01:intron 45.0%
GGACTGAATCTGAACATCTG+CGG - Chr4:8747047-8747066 None:intergenic 45.0%
GGAGTAGTTGAAATAGGAGG+CGG + Chr4:8748369-8748388 MsG0480018699.01.T01:intron 45.0%
GGCATATCAAGTGACAGCAT+TGG - Chr4:8751210-8751229 None:intergenic 45.0%
GGCGCATGCATATGCAAAAA+GGG + Chr4:8751829-8751848 MsG0480018699.01.T01:intron 45.0%
GGGGAAAAAACATGGGAGAA+GGG + Chr4:8747913-8747932 MsG0480018699.01.T01:intron 45.0%
GGTTTGAGCTAAGGGACTAA+AGG + Chr4:8748818-8748837 MsG0480018699.01.T01:intron 45.0%
GTTAGATTGGGGAGAGAATC+AGG + Chr4:8748422-8748441 MsG0480018699.01.T01:intron 45.0%
GTTCCACAACTACATGGGTT+CGG + Chr4:8751326-8751345 MsG0480018699.01.T01:CDS 45.0%
GTTTCGGACGTGTTGAATAC+AGG + Chr4:8744607-8744626 MsG0480018699.01.T01:intron 45.0%
TAAAAGAGAGGGAAGCCTAG+AGG - Chr4:8750199-8750218 None:intergenic 45.0%
TAAAGAGAGGGAAGCCTAGA+GGG - Chr4:8750247-8750266 None:intergenic 45.0%
TATAGGGGCCTCTAGGTTAT+TGG - Chr4:8744799-8744818 None:intergenic 45.0%
TCCAATAATCGATTGGCAGC+TGG - Chr4:8751353-8751372 None:intergenic 45.0%
TCCATGGACACATATGATGG+AGG + Chr4:8751304-8751323 MsG0480018699.01.T01:CDS 45.0%
TCGTCCATGGACACATATGA+TGG + Chr4:8751301-8751320 MsG0480018699.01.T01:CDS 45.0%
TCGTGTAGGAAATTCGTCCA+TGG + Chr4:8751288-8751307 MsG0480018699.01.T01:CDS 45.0%
TCTGTGTATGTTGGGGTGAT+GGG - Chr4:8751237-8751256 None:intergenic 45.0%
TGCAGCTAATTGAGCTGTGT+GGG - Chr4:8752090-8752109 None:intergenic 45.0%
TGCGGTGGAATAAGAGATCT+TGG + Chr4:8750703-8750722 MsG0480018699.01.T01:intron 45.0%
TGGAGGTTCCACAACTACAT+GGG + Chr4:8751321-8751340 MsG0480018699.01.T01:CDS 45.0%
TGGGTTATTGTGTGCCCTTT+AGG + Chr4:8747949-8747968 MsG0480018699.01.T01:intron 45.0%
TGTTGCAAGGAGGATTAGGA+GGG + Chr4:8747865-8747884 MsG0480018699.01.T01:intron 45.0%
TTAAAGAGAGGGAAGCCTAG+AGG - Chr4:8750248-8750267 None:intergenic 45.0%
TTATTGTGTGCCCTTTAGGC+AGG + Chr4:8747953-8747972 MsG0480018699.01.T01:intron 45.0%
TTCTCGAGTGGCTCTTCTTT+CGG + Chr4:8744975-8744994 MsG0480018699.01.T01:CDS 45.0%
TTCTGTGTATGTTGGGGTGA+TGG - Chr4:8751238-8751257 None:intergenic 45.0%
TTGCAGCTAATTGAGCTGTG+TGG - Chr4:8752091-8752110 None:intergenic 45.0%
TTTCGGAGAGAAGTTCTCTC+TGG - Chr4:8750145-8750164 None:intergenic 45.0%
! AACCTTGCTATGTTGCAAGG+AGG + Chr4:8747855-8747874 MsG0480018699.01.T01:intron 45.0%
! ACGCAAACAAAAGGTGCAAC+AGG - Chr4:8746350-8746369 None:intergenic 45.0%
! AGAATAAGGGTGTGTTTGGG+AGG - Chr4:8746247-8746266 None:intergenic 45.0%
! AGGGCTGAGCATTTGAAACT+TGG + Chr4:8750607-8750626 MsG0480018699.01.T01:intron 45.0%
! CAAACAAAAGGTGCAACAGG+GGG - Chr4:8746347-8746366 None:intergenic 45.0%
! CGCAAACAAAAGGTGCAACA+GGG - Chr4:8746349-8746368 None:intergenic 45.0%
! GAATAAGGGTGTGTTTGGGA+GGG - Chr4:8746246-8746265 None:intergenic 45.0%
! GAGTTAGGAGGTGAAAGTAC+GGG + Chr4:8745334-8745353 MsG0480018699.01.T01:intron 45.0%
! GCAAACAAAAGGTGCAACAG+GGG - Chr4:8746348-8746367 None:intergenic 45.0%
! GGCCATATCTCTAGTTGATG+TGG + Chr4:8750558-8750577 MsG0480018699.01.T01:intron 45.0%
! GGTCTGAGGTAACAAATTGC+AGG - Chr4:8743873-8743892 None:intergenic 45.0%
! GGTGCTACAAAACCAGTAAG+AGG + Chr4:8744442-8744461 MsG0480018699.01.T01:intron 45.0%
! GTACCAGAACAGAAGCATGA+AGG - Chr4:8751610-8751629 None:intergenic 45.0%
! TATTCGGTGGTTAGTCGCAT+AGG - Chr4:8746541-8746560 None:intergenic 45.0%
! TTCTAGAAGCTGCTCTTGTG+TGG + Chr4:8750335-8750354 MsG0480018699.01.T01:intron 45.0%
!! ACCGACTTGTATGCTAGATG+AGG + Chr4:8750798-8750817 MsG0480018699.01.T01:intron 45.0%
!! AGCTCAACTGGTTTGAGCTA+AGG + Chr4:8748809-8748828 MsG0480018699.01.T01:intron 45.0%
!! AGTTGATGACTTGGCATCCA+AGG + Chr4:8749134-8749153 MsG0480018699.01.T01:CDS 45.0%
!! CGGTTTTGTAGGGTTGAGTT+AGG - Chr4:8750782-8750801 None:intergenic 45.0%
!! GATCCTCTGAAACATCAGGA+GGG + Chr4:8752503-8752522 MsG0480018699.01.T01:intron 45.0%
!! GCTCAACTGGTTTGAGCTAA+GGG + Chr4:8748810-8748829 MsG0480018699.01.T01:intron 45.0%
!! GCTCAGTCCCTTTTATTTGC+TGG + Chr4:8744935-8744954 MsG0480018699.01.T01:CDS 45.0%
!! GTCCCTTTTATTTGCTGGCA+TGG + Chr4:8744940-8744959 MsG0480018699.01.T01:CDS 45.0%
!! GTGGATTGGGCCCAATAATT+GGG + Chr4:8750354-8750373 MsG0480018699.01.T01:intron 45.0%
!! GTTTGGATGGAGAGTTTTGG+AGG + Chr4:8746043-8746062 MsG0480018699.01.T01:intron 45.0%
!! TGTGGATTGGGCCCAATAAT+TGG + Chr4:8750353-8750372 MsG0480018699.01.T01:intron 45.0%
!! TTCTGCAGGGGTGTTTAGTT+TGG - Chr4:8751782-8751801 None:intergenic 45.0%
!! TTGAATGGCGTCGGTATCTA+CGG - Chr4:8746455-8746474 None:intergenic 45.0%
!!! TTGGATGGAGAGTTTTGGAG+GGG + Chr4:8746045-8746064 MsG0480018699.01.T01:intron 45.0%
!! TAAATTTAAAAGATATTATA+TGG + Chr4:8748958-8748977 MsG0480018699.01.T01:intron 5.0%
!!! ATTTTTTTTTCAAATTTTTA+GGG - Chr4:8744348-8744367 None:intergenic 5.0%
ACAAGGGAACCGGCAGAAAA+CGG + Chr4:8747812-8747831 MsG0480018699.01.T01:CDS 50.0%
ACAGGGACATGGAAGCTATG+AGG + Chr4:8746756-8746775 MsG0480018699.01.T01:intron 50.0%
ACCACGCTTTGGCACAAGAT+AGG + Chr4:8751992-8752011 MsG0480018699.01.T01:intron 50.0%
ACCTCAGTGTACTCCTCATC+TGG - Chr4:8749816-8749835 None:intergenic 50.0%
ACTGCAACCTCCTGCCTAAA+GGG - Chr4:8747966-8747985 None:intergenic 50.0%
AGCCTAGAGGGTGATTCACT+CGG - Chr4:8750186-8750205 None:intergenic 50.0%
AGTTGAGAAGTCAAGGTCCC+GGG + Chr4:8748841-8748860 MsG0480018699.01.T01:intron 50.0%
ATCACAACTCTTCAGGCCAG+AGG + Chr4:8749050-8749069 MsG0480018699.01.T01:intron 50.0%
ATGTCTTCGATCTGACGTGC+CGG + Chr4:8744632-8744651 MsG0480018699.01.T01:intron 50.0%
CACGTTCAGGACTGGACATT+TGG + Chr4:8750668-8750687 MsG0480018699.01.T01:intron 50.0%
CTCTCCATGTTCACGAGCAA+TGG - Chr4:8752611-8752630 None:intergenic 50.0%
CTCTTGGGAAACAAGGGAAC+CGG + Chr4:8747802-8747821 MsG0480018699.01.T01:CDS 50.0%
CTGAGGTGGAATCTCAACTG+CGG + Chr4:8749829-8749848 MsG0480018699.01.T01:CDS 50.0%
CTGTGTATGTTGGGGTGATG+GGG - Chr4:8751236-8751255 None:intergenic 50.0%
GAAAGAAGAGCCACTCGAGA+AGG - Chr4:8744976-8744995 None:intergenic 50.0%
GAACCGGCAGAAAACGGAAT+AGG + Chr4:8747818-8747837 MsG0480018699.01.T01:CDS 50.0%
GAAGCTGCTCTTGTGTGGAT+TGG + Chr4:8750340-8750359 MsG0480018699.01.T01:intron 50.0%
GAGTTGAGAAGTCAAGGTCC+CGG + Chr4:8748840-8748859 MsG0480018699.01.T01:intron 50.0%
GCTTCCATTGCTCGTGAACA+TGG + Chr4:8752604-8752623 MsG0480018699.01.T01:CDS 50.0%
GGACCTTCATGCTTCTGTTC+TGG + Chr4:8751604-8751623 MsG0480018699.01.T01:intron 50.0%
GGTAGGAGTTCACTGAACTC+TGG - Chr4:8750105-8750124 None:intergenic 50.0%
GTCACTGTTAGTGTCGTGTC+TGG - Chr4:8744521-8744540 None:intergenic 50.0%
GTCTGGTGTCCAACAGATGT+CGG - Chr4:8744401-8744420 None:intergenic 50.0%
GTGGCATAGATTTAGGCAGC+AGG + Chr4:8749387-8749406 MsG0480018699.01.T01:intron 50.0%
TAACCTAGAGGCCCCTATAG+AGG + Chr4:8744800-8744819 MsG0480018699.01.T01:five_prime_UTR 50.0%
TCCTTGCCAGGACTTAAACC+CGG - Chr4:8748862-8748881 None:intergenic 50.0%
TCTGTAGGAGTTCTGCTCTG+TGG + Chr4:8752168-8752187 MsG0480018699.01.T01:intron 50.0%
TGAGCAGATGCATTTGCCCT+TGG - Chr4:8744920-8744939 None:intergenic 50.0%
TGAGGTGGAATCTCAACTGC+GGG + Chr4:8749830-8749849 MsG0480018699.01.T01:CDS 50.0%
TGTGTCACACCGACATCTGT+TGG + Chr4:8744389-8744408 MsG0480018699.01.T01:intron 50.0%
TTCCGAGTGAATCACCCTCT+AGG + Chr4:8750181-8750200 MsG0480018699.01.T01:intron 50.0%
! AGATGAGGAGTACACTGAGG+TGG + Chr4:8749815-8749834 MsG0480018699.01.T01:CDS 50.0%
! GCAGAGATGCTGGACAGTTT+TGG + Chr4:8748128-8748147 MsG0480018699.01.T01:intron 50.0%
! TCCAGATGAGGAGTACACTG+AGG + Chr4:8749812-8749831 MsG0480018699.01.T01:CDS 50.0%
!! ACTGGTTTGGCTCTGTCACA+TGG + Chr4:8748551-8748570 MsG0480018699.01.T01:intron 50.0%
!! CACAGAAGTGTTAGCAGTGC+TGG - Chr4:8745566-8745585 None:intergenic 50.0%
!! GGATCCTCTGAAACATCAGG+AGG + Chr4:8752502-8752521 MsG0480018699.01.T01:intron 50.0%
!! TATGTTGGGGTGATGGGGTT+GGG - Chr4:8751231-8751250 None:intergenic 50.0%
!! TCTAGGAGCTTAGCTCTGGT+AGG - Chr4:8750122-8750141 None:intergenic 50.0%
!! TGAAGCACTGACTAAGCCGA+AGG + Chr4:8750900-8750919 MsG0480018699.01.T01:intron 50.0%
!!! ATGGAGAGTTTTGGAGGGGA+GGG + Chr4:8746049-8746068 MsG0480018699.01.T01:intron 50.0%
AAGGTCCCGGGTTTAAGTCC+TGG + Chr4:8748853-8748872 MsG0480018699.01.T01:intron 55.0%
AATTCTATGGGCCCACGCTC+TGG - Chr4:8752024-8752043 None:intergenic 55.0%
AGCAGCATTAGGGTCAACCC+TGG - Chr4:8751902-8751921 None:intergenic 55.0%
AGGGTCTGCCAAACATCGTG+TGG + Chr4:8748442-8748461 MsG0480018699.01.T01:intron 55.0%
CAACCTCTATAGGGGCCTCT+AGG - Chr4:8744806-8744825 None:intergenic 55.0%
CCTTGCCAGGACTTAAACCC+GGG - Chr4:8748861-8748880 None:intergenic 55.0%
CTGACTAAGCCGAAGGCTGA+TGG + Chr4:8750907-8750926 MsG0480018699.01.T01:intron 55.0%
CTGGTCTAGGAGCTTAGCTC+TGG - Chr4:8750126-8750145 None:intergenic 55.0%
CTTGTGCCAAAGCGTGGTCA+TGG - Chr4:8751990-8752009 None:intergenic 55.0%
GACTCCAGCTCAGAAACCTC+TGG - Chr4:8749069-8749088 None:intergenic 55.0%
GACTGCAACCTCCTGCCTAA+AGG - Chr4:8747967-8747986 None:intergenic 55.0%
GAGGCGGAAAATGGTGAAGC+AGG + Chr4:8748385-8748404 MsG0480018699.01.T01:intron 55.0%
GCCTATCTTGTGCCAAAGCG+TGG - Chr4:8751996-8752015 None:intergenic 55.0%
GGTCCGAACCCATGTAGTTG+TGG - Chr4:8751332-8751351 None:intergenic 55.0%
TGTTGACGAGCAGGTAGCCA+AGG + Chr4:8746952-8746971 MsG0480018699.01.T01:CDS 55.0%
TTCGAGCTGTCTCCTCGTCA+CGG - Chr4:8745702-8745721 None:intergenic 55.0%
TTGTGTGCCCTTTAGGCAGG+AGG + Chr4:8747956-8747975 MsG0480018699.01.T01:intron 55.0%
! ACAAAAGGATTGGTGGGGGG+AGG + Chr4:8748785-8748804 MsG0480018699.01.T01:intron 55.0%
! GGTTAGCCATGACCACGCTT+TGG + Chr4:8751981-8752000 MsG0480018699.01.T01:intron 55.0%
! TAGGAGGTGAAAGTACGGGC+AGG + Chr4:8745338-8745357 MsG0480018699.01.T01:intron 55.0%
!! GTATGTTGGGGTGATGGGGT+TGG - Chr4:8751232-8751251 None:intergenic 55.0%
!!! GATGGAGAGTTTTGGAGGGG+AGG + Chr4:8746048-8746067 MsG0480018699.01.T01:intron 55.0%
!!! TGGAGAGTTTTGGAGGGGAG+GGG + Chr4:8746050-8746069 MsG0480018699.01.T01:intron 55.0%
AATGCTCAGCCCTCAGCACG+AGG - Chr4:8750600-8750619 None:intergenic 60.0%
AGCGCTATGCCCTTCTCGAG+TGG + Chr4:8744963-8744982 MsG0480018699.01.T01:CDS 60.0%
ATGCTCAGCCCTCAGCACGA+GGG - Chr4:8750599-8750618 None:intergenic 60.0%
CAGGCCAGAGGTTTCTGAGC+TGG + Chr4:8749062-8749081 MsG0480018699.01.T01:intron 60.0%
CCACATTCCCCTCGTGCTGA+GGG + Chr4:8750588-8750607 MsG0480018699.01.T01:intron 60.0%
CCCGGGTTTAAGTCCTGGCA+AGG + Chr4:8748858-8748877 MsG0480018699.01.T01:intron 60.0%
CGGCCCTCCTGATGTTTCAG+AGG - Chr4:8752509-8752528 None:intergenic 60.0%
TCCACATTCCCCTCGTGCTG+AGG + Chr4:8750587-8750606 MsG0480018699.01.T01:intron 60.0%
! TCGCACGCTGCGCTTGCTTT+TGG + Chr4:8752481-8752500 MsG0480018699.01.T01:intron 60.0%
!!! AGAGTTTTGGAGGGGAGGGG+AGG + Chr4:8746053-8746072 MsG0480018699.01.T01:intron 60.0%
!!! GAGTTTTGGAGGGGAGGGGA+GGG + Chr4:8746054-8746073 MsG0480018699.01.T01:intron 60.0%
ATAGGCCACCGCCAGAGCGT+GGG + Chr4:8752010-8752029 MsG0480018699.01.T01:intron 65.0%
CCCTCAGCACGAGGGGAATG+TGG - Chr4:8750591-8750610 None:intergenic 65.0%
GGATGCGCTTGACCGTGACG+AGG + Chr4:8745687-8745706 MsG0480018699.01.T01:CDS 65.0%
GTGGGGGGAGGTAGCTCAAC+TGG + Chr4:8748797-8748816 MsG0480018699.01.T01:intron 65.0%
TCTATGGGCCCACGCTCTGG+CGG - Chr4:8752021-8752040 None:intergenic 65.0%
TGCTCAGCCCTCAGCACGAG+GGG - Chr4:8750598-8750617 None:intergenic 65.0%
GATAGGCCACCGCCAGAGCG+TGG + Chr4:8752009-8752028 MsG0480018699.01.T01:intron 70.0%
ATGGGCCCACGCTCTGGCGG+TGG - Chr4:8752018-8752037 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 8743733 8752645 8743733 ID=MsG0480018699.01;Name=MsG0480018699.01
Chr4 mRNA 8743733 8752645 8743733 ID=MsG0480018699.01.T01;Parent=MsG0480018699.01;Name=MsG0480018699.01.T01;_AED=0.44;_eAED=0.53;_QI=118|0.54|0.66|1|0.63|0.58|12|0|349
Chr4 exon 8743733 8743781 8743733 ID=MsG0480018699.01.T01:exon:2060;Parent=MsG0480018699.01.T01
Chr4 exon 8744794 8744996 8744794 ID=MsG0480018699.01.T01:exon:2061;Parent=MsG0480018699.01.T01
Chr4 exon 8745642 8745727 8745642 ID=MsG0480018699.01.T01:exon:2062;Parent=MsG0480018699.01.T01
Chr4 exon 8746413 8746474 8746413 ID=MsG0480018699.01.T01:exon:2063;Parent=MsG0480018699.01.T01
Chr4 exon 8746760 8746851 8746760 ID=MsG0480018699.01.T01:exon:2064;Parent=MsG0480018699.01.T01
Chr4 exon 8746952 8747077 8746952 ID=MsG0480018699.01.T01:exon:2065;Parent=MsG0480018699.01.T01
Chr4 exon 8747174 8747241 8747174 ID=MsG0480018699.01.T01:exon:2066;Parent=MsG0480018699.01.T01
Chr4 exon 8747767 8747839 8747767 ID=MsG0480018699.01.T01:exon:2067;Parent=MsG0480018699.01.T01
Chr4 exon 8749065 8749155 8749065 ID=MsG0480018699.01.T01:exon:2068;Parent=MsG0480018699.01.T01
Chr4 exon 8749801 8749908 8749801 ID=MsG0480018699.01.T01:exon:2069;Parent=MsG0480018699.01.T01
Chr4 exon 8751256 8751394 8751256 ID=MsG0480018699.01.T01:exon:2070;Parent=MsG0480018699.01.T01
Chr4 exon 8752575 8752645 8752575 ID=MsG0480018699.01.T01:exon:2071;Parent=MsG0480018699.01.T01
Chr4 five_prime_UTR 8743733 8743781 8743733 ID=MsG0480018699.01.T01:five_prime_utr;Parent=MsG0480018699.01.T01
Chr4 five_prime_UTR 8744794 8744862 8744794 ID=MsG0480018699.01.T01:five_prime_utr;Parent=MsG0480018699.01.T01
Chr4 CDS 8744863 8744996 8744863 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Chr4 CDS 8745642 8745727 8745642 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Chr4 CDS 8746413 8746474 8746413 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Chr4 CDS 8746760 8746851 8746760 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Chr4 CDS 8746952 8747077 8746952 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Chr4 CDS 8747174 8747241 8747174 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Chr4 CDS 8747767 8747839 8747767 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Chr4 CDS 8749065 8749155 8749065 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Chr4 CDS 8749801 8749908 8749801 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Chr4 CDS 8751256 8751394 8751256 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Chr4 CDS 8752575 8752645 8752575 ID=MsG0480018699.01.T01:cds;Parent=MsG0480018699.01.T01
Gene Sequence

>MsG0480018699.01.T01

ATGGCATCAAAGCAAATGGAAGCGATTCAGAAGAAATTAGGAATGCTAAATTATCCAAGGGCAAATGCATCTGCTCAGTCCCTTTTATTTGCTGGCATGGAGCGCTATGCCCTTCTCGAGTGGCTCTTCTTTCGGCTATTAGGTGATAAGTCACCCTTTTCTCAACAAAACTTACAAGGGGATGCGCTTGACCGTGACGAGGAGACAGCTCGAATTCAATATTTGGCAGAAATTGCTAAGTTTCTGGGCATTACAACAACCGTAGATACCGACGCCATTCAAGGACATGGAAGCTATGAGGACCGCACTGAAATGCTTCGTCTAATTGTAGATCTAGTGGAGGCAACCATATATGCTGATAATCCAGAATGGAGTGTTGACGAGCAGGTAGCCAAGGACATCCACTTGATAGATTCCATTGCAGAAAAACAGGCTCAAATATTTTCCGAAGAATGTAAATTGTTTCCCGCAGATGTTCAGATTCAGTCCATATATCCATTGATGAGATTCAGGCTTGAATTTGTATCTGAAGTTACCACTGTAACATCTGATATAGGGTCTTGCATCGACCATATGTGTGTTACACACTCTTATGCTAGACAACTCTTGGGAAACAAGGGAACCGGCAGAAAACGGAATAGGCCAGAGGTTTCTGAGCTGGAGTCGAAGCTTACTGAACAATCAAAAATATTACTGAATCTTCAACAAAAAGTTGATGACTTGGCATCCAAGCATGCTTATAATCCAGATGAGGAGTACACTGAGGTGGAATCTCAACTGCGGGAACATTTGGAATCTTTCCTAGAAACAGCTAGAACATTCAACATGATTTACACCAAGAATATTTGGGGAAAGCTTATAAAAGATTGTTGTCGTGTAGGAAATTCGTCCATGGACACATATGATGGAGGTTCCACAACTACATGGGTTCGGACCAGCTGCCAATCGATTATTGGAGGCATACAAAATGCTTCTAAAGTCATAAATCGAGATCTTGGAATTCTTTCCGCTTCCATTGCTCGTGAACATGGAGAGAAAATGAGCATTTGA
Protein sequence

>MsG0480018699.01.T01

MASKQMEAIQKKLGMLNYPRANASAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNLQGDALDRDEETARIQYLAEIAKFLGITTTVDTDAIQGHGSYEDRTEMLRLIVDLVEATIYADNPEWSVDEQVAKDIHLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLMRFRLEFVSEVTTVTSDIGSCIDHMCVTHSYARQLLGNKGTGRKRNRPEVSELESKLTEQSKILLNLQQKVDDLASKHAYNPDEEYTEVESQLREHLESFLETARTFNMIYTKNIWGKLIKDCCRVGNSSMDTYDGGSTTTWVRTSCQSIIGGIQNASKVINRDLGILSASIAREHGEKMSI*