Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019156.01.T01 | XP_003605120.1 | 80.297 | 472 | 67 | 1 | 1 | 446 | 1 | 472 | 0 | 741 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019156.01.T01 | Q9C5D2 | 26.446 | 363 | 199 | 13 | 104 | 407 | 110 | 463 | 7.41E-16 | 83.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019156.01.T01 | G7J164 | 80.297 | 472 | 67 | 1 | 1 | 446 | 1 | 472 | 0.0 | 741 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180002234.01 | MsG0480019156.01 | 0.801302 | 9.598055e-49 | 4.568102e-46 |
MsG0480019156.01 | MsG0780039282.01 | 0.829168 | 5.985770e-55 | 6.078205e-52 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019156.01.T01 | MTR_4g024200 | 80.297 | 472 | 67 | 1 | 1 | 446 | 1 | 472 | 0.0 | 741 |
MsG0480019156.01.T01 | MTR_6g027420 | 55.531 | 461 | 166 | 9 | 9 | 439 | 23 | 474 | 4.82e-150 | 435 |
MsG0480019156.01.T01 | MTR_4g021765 | 62.733 | 322 | 115 | 3 | 112 | 432 | 3 | 320 | 1.21e-138 | 401 |
MsG0480019156.01.T01 | MTR_8g076010 | 50.431 | 464 | 156 | 9 | 9 | 439 | 14 | 436 | 1.42e-133 | 392 |
MsG0480019156.01.T01 | MTR_4g021835 | 49.364 | 472 | 156 | 8 | 2 | 432 | 18 | 447 | 3.15e-133 | 392 |
MsG0480019156.01.T01 | MTR_1g023530 | 49.227 | 453 | 158 | 8 | 9 | 432 | 30 | 439 | 2.09e-123 | 367 |
MsG0480019156.01.T01 | MTR_4g006290 | 49.403 | 419 | 137 | 9 | 95 | 440 | 31 | 447 | 6.41e-112 | 337 |
MsG0480019156.01.T01 | MTR_3g110148 | 42.198 | 455 | 146 | 11 | 9 | 437 | 7 | 370 | 2.49e-94 | 290 |
MsG0480019156.01.T01 | MTR_4g006450 | 37.982 | 545 | 214 | 9 | 9 | 434 | 7 | 546 | 6.63e-91 | 286 |
MsG0480019156.01.T01 | MTR_6g042905 | 43.468 | 421 | 174 | 11 | 9 | 401 | 20 | 404 | 4.59e-90 | 280 |
MsG0480019156.01.T01 | MTR_3g074570 | 39.821 | 447 | 173 | 6 | 76 | 431 | 2 | 443 | 7.53e-89 | 278 |
MsG0480019156.01.T01 | MTR_6g025290 | 42.326 | 430 | 180 | 9 | 2 | 404 | 24 | 412 | 6.03e-86 | 269 |
MsG0480019156.01.T01 | MTR_6g016705 | 42.476 | 412 | 167 | 9 | 37 | 407 | 18 | 400 | 5.07e-84 | 264 |
MsG0480019156.01.T01 | MTR_4g006210 | 46.594 | 367 | 136 | 9 | 2 | 367 | 24 | 331 | 7.34e-84 | 266 |
MsG0480019156.01.T01 | MTR_7g044870 | 43.059 | 425 | 147 | 11 | 9 | 404 | 28 | 386 | 8.96e-84 | 263 |
MsG0480019156.01.T01 | MTR_8g045150 | 39.165 | 503 | 206 | 11 | 4 | 432 | 3 | 479 | 9.48e-84 | 266 |
MsG0480019156.01.T01 | MTR_5g046730 | 41.148 | 418 | 188 | 6 | 8 | 398 | 33 | 419 | 7.24e-83 | 261 |
MsG0480019156.01.T01 | MTR_6g016750 | 40.618 | 421 | 179 | 12 | 9 | 401 | 31 | 408 | 4.63e-81 | 257 |
MsG0480019156.01.T01 | MTR_5g075860 | 52.098 | 286 | 110 | 4 | 173 | 432 | 265 | 549 | 1.57e-79 | 257 |
MsG0480019156.01.T01 | MTR_3g083280 | 37.698 | 504 | 209 | 13 | 10 | 427 | 7 | 491 | 2.68e-78 | 252 |
MsG0480019156.01.T01 | MTR_1g028400 | 42.325 | 456 | 146 | 10 | 1 | 427 | 107 | 474 | 6.16e-77 | 248 |
MsG0480019156.01.T01 | MTR_5g095830 | 34.458 | 563 | 205 | 15 | 9 | 429 | 47 | 587 | 4.15e-76 | 250 |
MsG0480019156.01.T01 | MTR_6g022820 | 37.996 | 479 | 191 | 10 | 9 | 419 | 31 | 471 | 7.78e-76 | 245 |
MsG0480019156.01.T01 | MTR_4g133640 | 45.015 | 331 | 149 | 6 | 129 | 431 | 254 | 579 | 1.84e-74 | 244 |
MsG0480019156.01.T01 | MTR_6g016910 | 40.603 | 431 | 183 | 9 | 10 | 405 | 15 | 407 | 2.94e-74 | 239 |
MsG0480019156.01.T01 | MTR_2g007590 | 45.312 | 320 | 145 | 5 | 137 | 431 | 265 | 579 | 7.24e-74 | 243 |
MsG0480019156.01.T01 | MTR_2g007590 | 35.681 | 426 | 180 | 13 | 9 | 403 | 33 | 395 | 4.30e-47 | 171 |
MsG0480019156.01.T01 | MTR_1g069145 | 36.564 | 454 | 190 | 12 | 9 | 428 | 112 | 501 | 1.15e-72 | 238 |
MsG0480019156.01.T01 | MTR_8g446780 | 55.556 | 243 | 74 | 2 | 165 | 406 | 21 | 230 | 1.64e-72 | 228 |
MsG0480019156.01.T01 | MTR_3g006050 | 47.097 | 310 | 144 | 5 | 142 | 439 | 296 | 597 | 7.30e-72 | 238 |
MsG0480019156.01.T01 | MTR_3g006050 | 33.471 | 484 | 235 | 13 | 8 | 407 | 4 | 484 | 1.28e-59 | 205 |
MsG0480019156.01.T01 | MTR_8g067230 | 47.115 | 312 | 123 | 8 | 121 | 429 | 25 | 297 | 1.42e-70 | 226 |
MsG0480019156.01.T01 | MTR_4g019320 | 34.426 | 549 | 231 | 15 | 4 | 431 | 2 | 542 | 2.00e-70 | 233 |
MsG0480019156.01.T01 | MTR_4g006240 | 61.809 | 199 | 76 | 0 | 230 | 428 | 357 | 555 | 2.55e-69 | 230 |
MsG0480019156.01.T01 | MTR_6g016915 | 38.780 | 410 | 184 | 8 | 2 | 411 | 38 | 380 | 1.11e-67 | 221 |
MsG0480019156.01.T01 | MTR_8g060730 | 42.105 | 342 | 182 | 9 | 1 | 336 | 1 | 332 | 3.96e-66 | 215 |
MsG0480019156.01.T01 | MTR_5g088250 | 47.619 | 231 | 118 | 1 | 212 | 439 | 310 | 540 | 6.65e-64 | 215 |
MsG0480019156.01.T01 | MTR_6g016685 | 39.326 | 356 | 155 | 9 | 73 | 401 | 11 | 332 | 1.27e-63 | 209 |
MsG0480019156.01.T01 | MTR_4g435338 | 51.739 | 230 | 101 | 3 | 206 | 434 | 88 | 308 | 2.52e-63 | 207 |
MsG0480019156.01.T01 | MTR_4g435338 | 29.268 | 287 | 144 | 8 | 2 | 242 | 25 | 298 | 6.57e-16 | 79.0 |
MsG0480019156.01.T01 | MTR_5g068550 | 51.073 | 233 | 85 | 3 | 8 | 214 | 5 | 234 | 2.38e-62 | 205 |
MsG0480019156.01.T01 | MTR_1g050478 | 37.317 | 477 | 214 | 17 | 9 | 408 | 11 | 479 | 3.46e-62 | 211 |
MsG0480019156.01.T01 | MTR_1g050478 | 51.304 | 230 | 106 | 3 | 169 | 398 | 320 | 543 | 1.11e-59 | 204 |
MsG0480019156.01.T01 | MTR_6g016740 | 39.529 | 382 | 157 | 10 | 46 | 401 | 29 | 362 | 9.88e-62 | 205 |
MsG0480019156.01.T01 | MTR_4g129140 | 38.534 | 423 | 204 | 13 | 10 | 396 | 18 | 420 | 7.19e-61 | 204 |
MsG0480019156.01.T01 | MTR_8g037780 | 35.333 | 450 | 203 | 9 | 1 | 419 | 16 | 408 | 1.00e-60 | 208 |
MsG0480019156.01.T01 | MTR_8g037780 | 39.322 | 295 | 146 | 6 | 172 | 437 | 292 | 582 | 9.44e-51 | 181 |
MsG0480019156.01.T01 | MTR_4g059340 | 32.096 | 539 | 228 | 14 | 9 | 419 | 10 | 538 | 1.44e-60 | 206 |
MsG0480019156.01.T01 | MTR_5g430490 | 51.724 | 203 | 97 | 1 | 230 | 432 | 368 | 569 | 9.33e-60 | 205 |
MsG0480019156.01.T01 | MTR_5g430490 | 38.211 | 246 | 109 | 7 | 8 | 220 | 13 | 248 | 9.12e-37 | 142 |
MsG0480019156.01.T01 | MTR_4g024220 | 63.218 | 174 | 58 | 2 | 272 | 445 | 28 | 195 | 4.03e-59 | 192 |
MsG0480019156.01.T01 | MTR_6g054950 | 38.061 | 423 | 142 | 11 | 9 | 401 | 21 | 353 | 9.70e-59 | 197 |
MsG0480019156.01.T01 | MTR_8g017160 | 36.036 | 444 | 196 | 10 | 8 | 419 | 26 | 413 | 1.21e-58 | 202 |
MsG0480019156.01.T01 | MTR_8g017160 | 51.429 | 210 | 96 | 3 | 231 | 437 | 382 | 588 | 5.87e-53 | 187 |
MsG0480019156.01.T01 | MTR_8g045190 | 46.063 | 254 | 103 | 4 | 9 | 231 | 19 | 269 | 2.18e-58 | 193 |
MsG0480019156.01.T01 | MTR_2g104970 | 62.759 | 145 | 54 | 0 | 288 | 432 | 11 | 155 | 1.18e-57 | 187 |
MsG0480019156.01.T01 | MTR_1g075040 | 39.193 | 347 | 146 | 8 | 9 | 327 | 54 | 363 | 1.27e-57 | 194 |
MsG0480019156.01.T01 | MTR_3g110740 | 42.475 | 299 | 134 | 7 | 129 | 398 | 273 | 562 | 5.61e-57 | 197 |
MsG0480019156.01.T01 | MTR_3g110740 | 34.310 | 478 | 233 | 14 | 12 | 422 | 46 | 509 | 1.54e-55 | 194 |
MsG0480019156.01.T01 | MTR_1g115380 | 43.878 | 294 | 155 | 6 | 147 | 436 | 269 | 556 | 1.64e-56 | 196 |
MsG0480019156.01.T01 | MTR_1g115380 | 34.328 | 402 | 187 | 10 | 9 | 376 | 6 | 364 | 6.59e-47 | 170 |
MsG0480019156.01.T01 | MTR_4g008450 | 51.818 | 220 | 90 | 4 | 212 | 431 | 81 | 284 | 4.32e-55 | 185 |
MsG0480019156.01.T01 | MTR_4g008450 | 29.545 | 308 | 163 | 12 | 8 | 290 | 17 | 295 | 3.44e-16 | 79.3 |
MsG0480019156.01.T01 | MTR_5g095810 | 57.143 | 175 | 55 | 1 | 254 | 428 | 113 | 267 | 2.46e-53 | 180 |
MsG0480019156.01.T01 | MTR_7g029085 | 46.122 | 245 | 94 | 7 | 10 | 221 | 20 | 259 | 2.78e-53 | 181 |
MsG0480019156.01.T01 | MTR_7g029075 | 46.122 | 245 | 94 | 7 | 10 | 221 | 20 | 259 | 2.78e-53 | 181 |
MsG0480019156.01.T01 | MTR_4g008420 | 48.018 | 227 | 82 | 4 | 211 | 428 | 86 | 285 | 3.50e-53 | 181 |
MsG0480019156.01.T01 | MTR_4g008420 | 36.293 | 259 | 107 | 7 | 9 | 217 | 32 | 282 | 9.90e-31 | 120 |
MsG0480019156.01.T01 | MTR_3g110150 | 46.667 | 225 | 114 | 3 | 214 | 436 | 61 | 281 | 4.18e-52 | 177 |
MsG0480019156.01.T01 | MTR_3g110150 | 29.730 | 259 | 136 | 4 | 34 | 247 | 16 | 273 | 1.42e-19 | 89.0 |
MsG0480019156.01.T01 | MTR_6g016725 | 32.854 | 487 | 179 | 15 | 9 | 402 | 17 | 448 | 4.86e-52 | 185 |
MsG0480019156.01.T01 | MTR_6g016725 | 58.580 | 169 | 68 | 2 | 230 | 398 | 432 | 598 | 5.94e-51 | 182 |
MsG0480019156.01.T01 | MTR_5g095790 | 48.858 | 219 | 86 | 5 | 8 | 226 | 18 | 210 | 6.24e-51 | 173 |
MsG0480019156.01.T01 | MTR_3g036270 | 33.196 | 485 | 180 | 14 | 9 | 402 | 17 | 448 | 1.05e-50 | 181 |
MsG0480019156.01.T01 | MTR_3g036270 | 61.538 | 169 | 63 | 2 | 230 | 398 | 432 | 598 | 1.16e-45 | 167 |
MsG0480019156.01.T01 | MTR_4g008330 | 58.065 | 155 | 64 | 1 | 288 | 441 | 1 | 155 | 3.12e-50 | 168 |
MsG0480019156.01.T01 | MTR_4g009055 | 35.025 | 394 | 192 | 10 | 91 | 431 | 1 | 383 | 3.53e-50 | 175 |
MsG0480019156.01.T01 | MTR_3g465770 | 42.966 | 263 | 138 | 5 | 178 | 436 | 315 | 569 | 1.21e-49 | 178 |
MsG0480019156.01.T01 | MTR_3g465770 | 30.786 | 458 | 248 | 12 | 10 | 404 | 13 | 464 | 1.81e-42 | 158 |
MsG0480019156.01.T01 | MTR_7g029535 | 40.667 | 300 | 90 | 8 | 9 | 222 | 17 | 314 | 1.33e-49 | 178 |
MsG0480019156.01.T01 | MTR_7g029535 | 59.172 | 169 | 67 | 2 | 230 | 398 | 430 | 596 | 3.06e-47 | 172 |
MsG0480019156.01.T01 | MTR_1g069090 | 44.545 | 220 | 92 | 3 | 214 | 428 | 77 | 271 | 1.99e-49 | 170 |
MsG0480019156.01.T01 | MTR_6g016760 | 61.871 | 139 | 52 | 1 | 261 | 399 | 16 | 153 | 5.86e-49 | 167 |
MsG0480019156.01.T01 | MTR_8g045170 | 38.838 | 327 | 123 | 6 | 50 | 347 | 75 | 353 | 6.75e-49 | 171 |
MsG0480019156.01.T01 | MTR_6g016905 | 32.568 | 479 | 238 | 13 | 3 | 407 | 2 | 469 | 1.13e-48 | 175 |
MsG0480019156.01.T01 | MTR_6g016905 | 52.874 | 174 | 78 | 2 | 228 | 401 | 368 | 537 | 1.42e-46 | 169 |
MsG0480019156.01.T01 | MTR_4g009030 | 35.786 | 299 | 163 | 5 | 157 | 428 | 254 | 550 | 1.70e-46 | 169 |
MsG0480019156.01.T01 | MTR_4g009030 | 29.787 | 423 | 212 | 13 | 11 | 405 | 7 | 372 | 1.44e-34 | 135 |
MsG0480019156.01.T01 | MTR_4g006250 | 57.037 | 135 | 58 | 0 | 298 | 432 | 1 | 135 | 1.07e-43 | 150 |
MsG0480019156.01.T01 | MTR_3g074550 | 34.247 | 365 | 188 | 10 | 92 | 429 | 33 | 372 | 2.38e-43 | 156 |
MsG0480019156.01.T01 | MTR_3g074550 | 26.031 | 388 | 189 | 15 | 2 | 334 | 7 | 351 | 1.20e-13 | 72.4 |
MsG0480019156.01.T01 | MTR_2g078550 | 63.934 | 122 | 43 | 1 | 253 | 374 | 3 | 123 | 2.52e-43 | 149 |
MsG0480019156.01.T01 | MTR_4g008490 | 56.000 | 150 | 56 | 4 | 288 | 428 | 3 | 151 | 1.26e-42 | 148 |
MsG0480019156.01.T01 | MTR_6g080560 | 55.556 | 144 | 61 | 1 | 288 | 428 | 144 | 287 | 1.33e-42 | 152 |
MsG0480019156.01.T01 | MTR_6g080560 | 32.103 | 271 | 121 | 7 | 9 | 228 | 6 | 264 | 6.71e-29 | 115 |
MsG0480019156.01.T01 | MTR_3g074000 | 31.696 | 448 | 212 | 11 | 10 | 427 | 12 | 395 | 3.25e-42 | 155 |
MsG0480019156.01.T01 | MTR_3g074000 | 33.333 | 150 | 69 | 2 | 189 | 310 | 293 | 439 | 1.25e-12 | 69.7 |
MsG0480019156.01.T01 | MTR_4g008480 | 52.597 | 154 | 68 | 3 | 180 | 330 | 89 | 240 | 3.28e-42 | 151 |
MsG0480019156.01.T01 | MTR_4g008480 | 47.191 | 89 | 44 | 2 | 343 | 428 | 176 | 264 | 8.79e-15 | 75.1 |
MsG0480019156.01.T01 | MTR_4g008480 | 31.687 | 243 | 125 | 10 | 8 | 218 | 29 | 262 | 7.99e-12 | 66.2 |
MsG0480019156.01.T01 | MTR_4g008340 | 50.968 | 155 | 72 | 2 | 288 | 439 | 168 | 321 | 5.56e-42 | 151 |
MsG0480019156.01.T01 | MTR_4g008340 | 28.399 | 331 | 158 | 10 | 3 | 289 | 25 | 320 | 4.52e-24 | 102 |
MsG0480019156.01.T01 | MTR_0295s0010 | 64.463 | 121 | 42 | 1 | 262 | 381 | 1 | 121 | 1.10e-41 | 149 |
MsG0480019156.01.T01 | MTR_1g115390 | 43.130 | 262 | 134 | 7 | 134 | 391 | 97 | 347 | 1.14e-41 | 151 |
MsG0480019156.01.T01 | MTR_1g115390 | 27.376 | 263 | 151 | 8 | 177 | 402 | 25 | 284 | 1.36e-11 | 66.2 |
MsG0480019156.01.T01 | MTR_0105s0180 | 51.765 | 170 | 73 | 4 | 137 | 297 | 3 | 172 | 8.24e-41 | 144 |
MsG0480019156.01.T01 | MTR_0105s0120 | 51.765 | 170 | 73 | 4 | 137 | 297 | 3 | 172 | 8.51e-41 | 144 |
MsG0480019156.01.T01 | MTR_0105s0010 | 51.765 | 170 | 73 | 4 | 137 | 297 | 3 | 172 | 1.20e-40 | 144 |
MsG0480019156.01.T01 | MTR_0105s0050 | 51.765 | 170 | 73 | 4 | 137 | 297 | 3 | 172 | 1.36e-40 | 143 |
MsG0480019156.01.T01 | MTR_5g087540 | 45.366 | 205 | 77 | 4 | 227 | 423 | 42 | 219 | 3.86e-40 | 144 |
MsG0480019156.01.T01 | MTR_4g008400 | 52.414 | 145 | 67 | 2 | 288 | 431 | 140 | 283 | 1.88e-39 | 144 |
MsG0480019156.01.T01 | MTR_4g008400 | 30.183 | 328 | 142 | 12 | 9 | 289 | 6 | 293 | 1.50e-26 | 108 |
MsG0480019156.01.T01 | MTR_8g446800 | 41.364 | 220 | 69 | 6 | 2 | 216 | 3 | 167 | 5.28e-39 | 139 |
MsG0480019156.01.T01 | MTR_1g069120 | 33.728 | 338 | 149 | 11 | 9 | 312 | 112 | 408 | 2.06e-38 | 144 |
MsG0480019156.01.T01 | MTR_5g067910 | 58.475 | 118 | 48 | 1 | 105 | 221 | 1 | 118 | 6.16e-38 | 134 |
MsG0480019156.01.T01 | MTR_0105s0030 | 50.588 | 170 | 75 | 4 | 137 | 297 | 3 | 172 | 9.48e-38 | 136 |
MsG0480019156.01.T01 | MTR_4g132730 | 63.303 | 109 | 39 | 1 | 324 | 432 | 143 | 250 | 2.70e-37 | 139 |
MsG0480019156.01.T01 | MTR_4g132730 | 29.487 | 234 | 130 | 10 | 9 | 218 | 22 | 244 | 1.20e-13 | 72.0 |
MsG0480019156.01.T01 | MTR_4g010410 | 44.811 | 212 | 81 | 7 | 9 | 193 | 26 | 228 | 3.23e-37 | 136 |
MsG0480019156.01.T01 | MTR_4g005810 | 58.088 | 136 | 57 | 0 | 260 | 395 | 12 | 147 | 3.73e-37 | 137 |
MsG0480019156.01.T01 | MTR_4g435328 | 33.762 | 311 | 165 | 5 | 50 | 332 | 1 | 298 | 1.60e-36 | 136 |
MsG0480019156.01.T01 | MTR_6g016720 | 57.627 | 118 | 49 | 1 | 231 | 348 | 101 | 217 | 1.77e-36 | 134 |
MsG0480019156.01.T01 | MTR_4g006280 | 47.205 | 161 | 81 | 2 | 265 | 424 | 160 | 317 | 2.69e-36 | 136 |
MsG0480019156.01.T01 | MTR_4g006280 | 39.161 | 143 | 78 | 4 | 9 | 144 | 65 | 205 | 7.81e-19 | 87.4 |
MsG0480019156.01.T01 | MTR_4g012820 | 40.686 | 204 | 97 | 4 | 160 | 358 | 1 | 185 | 2.37e-34 | 127 |
MsG0480019156.01.T01 | MTR_5g067860 | 57.600 | 125 | 50 | 3 | 106 | 229 | 47 | 169 | 5.33e-34 | 128 |
MsG0480019156.01.T01 | MTR_4g035280 | 43.694 | 222 | 83 | 9 | 1 | 192 | 20 | 229 | 1.78e-33 | 127 |
MsG0480019156.01.T01 | MTR_3g073390 | 38.372 | 258 | 123 | 8 | 178 | 430 | 280 | 506 | 2.07e-32 | 129 |
MsG0480019156.01.T01 | MTR_3g073390 | 36.607 | 224 | 110 | 9 | 10 | 224 | 18 | 218 | 3.75e-22 | 99.4 |
MsG0480019156.01.T01 | MTR_4g011120 | 41.121 | 214 | 88 | 7 | 9 | 193 | 7 | 211 | 2.98e-31 | 119 |
MsG0480019156.01.T01 | MTR_4g035290 | 43.694 | 222 | 86 | 7 | 1 | 193 | 20 | 231 | 3.09e-31 | 123 |
MsG0480019156.01.T01 | MTR_4g010750 | 37.931 | 232 | 90 | 8 | 10 | 195 | 20 | 243 | 1.27e-28 | 114 |
MsG0480019156.01.T01 | MTR_4g008380 | 55.789 | 95 | 42 | 0 | 338 | 432 | 1 | 95 | 4.19e-28 | 107 |
MsG0480019156.01.T01 | MTR_5g067490 | 33.811 | 349 | 156 | 10 | 37 | 319 | 10 | 349 | 1.57e-27 | 113 |
MsG0480019156.01.T01 | MTR_4g010590 | 36.967 | 211 | 97 | 2 | 9 | 191 | 8 | 210 | 3.50e-27 | 108 |
MsG0480019156.01.T01 | MTR_4g010615 | 37.097 | 248 | 96 | 10 | 2 | 195 | 18 | 259 | 7.66e-27 | 109 |
MsG0480019156.01.T01 | MTR_3g081430 | 36.162 | 271 | 130 | 8 | 90 | 326 | 13 | 274 | 1.39e-26 | 108 |
MsG0480019156.01.T01 | MTR_4g008430 | 54.639 | 97 | 44 | 0 | 230 | 326 | 207 | 303 | 9.13e-26 | 107 |
MsG0480019156.01.T01 | MTR_4g008430 | 31.923 | 260 | 143 | 9 | 121 | 352 | 1 | 254 | 1.34e-24 | 103 |
MsG0480019156.01.T01 | MTR_4g006510 | 54.545 | 88 | 36 | 2 | 361 | 444 | 4 | 91 | 1.06e-25 | 100 |
MsG0480019156.01.T01 | MTR_4g008440 | 41.026 | 156 | 61 | 2 | 9 | 138 | 6 | 156 | 1.49e-25 | 104 |
MsG0480019156.01.T01 | MTR_4g008440 | 54.945 | 91 | 40 | 1 | 288 | 378 | 141 | 230 | 3.47e-22 | 95.5 |
MsG0480019156.01.T01 | MTR_4g010880 | 35.931 | 231 | 105 | 6 | 4 | 196 | 14 | 239 | 1.76e-24 | 102 |
MsG0480019156.01.T01 | MTR_4g010630 | 38.889 | 216 | 84 | 9 | 11 | 191 | 9 | 211 | 2.38e-24 | 101 |
MsG0480019156.01.T01 | MTR_4g010510 | 39.070 | 215 | 82 | 9 | 10 | 186 | 12 | 215 | 3.21e-24 | 100 |
MsG0480019156.01.T01 | MTR_4g006460 | 41.916 | 167 | 78 | 5 | 3 | 168 | 10 | 158 | 3.37e-24 | 101 |
MsG0480019156.01.T01 | MTR_4g006460 | 46.364 | 110 | 40 | 1 | 295 | 404 | 125 | 215 | 2.93e-22 | 95.9 |
MsG0480019156.01.T01 | MTR_4g016660 | 33.333 | 282 | 126 | 10 | 1 | 235 | 1 | 267 | 6.17e-24 | 101 |
MsG0480019156.01.T01 | MTR_8g080900 | 57.282 | 103 | 40 | 2 | 10 | 112 | 17 | 115 | 6.37e-24 | 97.4 |
MsG0480019156.01.T01 | MTR_2g103530 | 58.025 | 81 | 34 | 0 | 348 | 428 | 89 | 169 | 2.82e-23 | 97.4 |
MsG0480019156.01.T01 | MTR_2g103530 | 29.237 | 236 | 107 | 9 | 1 | 230 | 1 | 182 | 2.37e-14 | 72.0 |
MsG0480019156.01.T01 | MTR_4g010710 | 36.207 | 232 | 100 | 7 | 9 | 195 | 6 | 234 | 4.67e-23 | 98.6 |
MsG0480019156.01.T01 | MTR_6g016900 | 60.494 | 81 | 32 | 0 | 310 | 390 | 27 | 107 | 6.79e-23 | 97.8 |
MsG0480019156.01.T01 | MTR_7g100890 | 39.752 | 161 | 95 | 2 | 269 | 428 | 262 | 421 | 1.02e-22 | 100 |
MsG0480019156.01.T01 | MTR_7g100890 | 26.899 | 316 | 208 | 10 | 105 | 401 | 10 | 321 | 1.47e-16 | 82.0 |
MsG0480019156.01.T01 | MTR_3g008790 | 45.000 | 120 | 35 | 1 | 288 | 407 | 69 | 157 | 1.49e-22 | 94.4 |
MsG0480019156.01.T01 | MTR_3g008790 | 36.567 | 134 | 67 | 2 | 78 | 196 | 24 | 154 | 2.94e-11 | 62.4 |
MsG0480019156.01.T01 | MTR_1g042340 | 37.563 | 197 | 82 | 5 | 1 | 168 | 1 | 185 | 1.28e-21 | 93.2 |
MsG0480019156.01.T01 | MTR_6g018580 | 40.491 | 163 | 65 | 5 | 2 | 138 | 24 | 180 | 2.85e-21 | 92.0 |
MsG0480019156.01.T01 | MTR_7g024310 | 47.015 | 134 | 44 | 2 | 46 | 153 | 2 | 134 | 6.44e-21 | 91.7 |
MsG0480019156.01.T01 | MTR_5g067480 | 50.505 | 99 | 48 | 1 | 244 | 342 | 74 | 171 | 7.13e-21 | 91.7 |
MsG0480019156.01.T01 | MTR_6g016765 | 39.355 | 155 | 63 | 3 | 9 | 137 | 66 | 215 | 7.15e-21 | 91.7 |
MsG0480019156.01.T01 | MTR_4g016500 | 34.677 | 248 | 86 | 9 | 10 | 191 | 32 | 269 | 7.71e-21 | 95.1 |
MsG0480019156.01.T01 | MTR_1155s0010 | 48.598 | 107 | 49 | 3 | 8 | 111 | 13 | 116 | 9.86e-21 | 88.6 |
MsG0480019156.01.T01 | MTR_0345s0020 | 48.598 | 107 | 49 | 3 | 8 | 111 | 13 | 116 | 9.86e-21 | 88.6 |
MsG0480019156.01.T01 | MTR_0105s0110 | 48.598 | 107 | 49 | 3 | 8 | 111 | 13 | 116 | 9.86e-21 | 88.6 |
MsG0480019156.01.T01 | MTR_4g006520 | 47.273 | 110 | 52 | 3 | 8 | 116 | 6 | 110 | 2.05e-20 | 88.2 |
MsG0480019156.01.T01 | MTR_4g008290 | 52.427 | 103 | 42 | 3 | 10 | 112 | 24 | 119 | 2.96e-20 | 86.7 |
MsG0480019156.01.T01 | MTR_4g010970 | 42.953 | 149 | 48 | 4 | 9 | 129 | 29 | 168 | 3.17e-20 | 88.6 |
MsG0480019156.01.T01 | MTR_4g010450 | 36.486 | 222 | 88 | 9 | 10 | 190 | 25 | 234 | 3.07e-19 | 87.0 |
MsG0480019156.01.T01 | MTR_4g010460 | 37.853 | 177 | 64 | 6 | 10 | 151 | 31 | 196 | 3.14e-18 | 83.2 |
MsG0480019156.01.T01 | MTR_2g021030 | 26.149 | 348 | 190 | 11 | 116 | 407 | 127 | 463 | 5.28e-18 | 87.0 |
MsG0480019156.01.T01 | MTR_2g021030 | 23.295 | 352 | 229 | 9 | 114 | 435 | 254 | 594 | 1.89e-16 | 82.0 |
MsG0480019156.01.T01 | MTR_6g033270 | 31.987 | 297 | 113 | 13 | 10 | 259 | 10 | 264 | 6.04e-18 | 84.0 |
MsG0480019156.01.T01 | MTR_6g018570 | 56.410 | 78 | 34 | 0 | 327 | 404 | 376 | 453 | 6.99e-18 | 85.9 |
MsG0480019156.01.T01 | MTR_6g042880 | 40.940 | 149 | 58 | 6 | 9 | 130 | 23 | 168 | 1.29e-17 | 80.5 |
MsG0480019156.01.T01 | MTR_4g010420 | 54.321 | 81 | 37 | 0 | 113 | 193 | 1 | 81 | 3.30e-17 | 78.2 |
MsG0480019156.01.T01 | MTR_5g039080 | 34.783 | 184 | 100 | 6 | 9 | 191 | 24 | 188 | 2.29e-15 | 75.5 |
MsG0480019156.01.T01 | MTR_0041s0060 | 58.929 | 56 | 23 | 0 | 345 | 400 | 1 | 56 | 3.20e-15 | 70.1 |
MsG0480019156.01.T01 | MTR_1g114610 | 23.881 | 402 | 255 | 11 | 38 | 425 | 39 | 403 | 3.70e-15 | 77.4 |
MsG0480019156.01.T01 | MTR_4g016667 | 36.527 | 167 | 65 | 6 | 63 | 198 | 44 | 200 | 4.78e-15 | 74.7 |
MsG0480019156.01.T01 | MTR_7g112570 | 24.396 | 455 | 249 | 18 | 38 | 410 | 66 | 507 | 8.05e-15 | 77.0 |
MsG0480019156.01.T01 | MTR_7g112570 | 24.130 | 460 | 254 | 18 | 38 | 415 | 66 | 512 | 8.74e-15 | 77.0 |
MsG0480019156.01.T01 | MTR_7g112570 | 24.130 | 460 | 254 | 18 | 38 | 415 | 66 | 512 | 1.24e-14 | 76.6 |
MsG0480019156.01.T01 | MTR_0807s0010 | 53.623 | 69 | 31 | 1 | 338 | 405 | 1 | 69 | 1.38e-14 | 69.3 |
MsG0480019156.01.T01 | MTR_8g067610 | 68.627 | 51 | 16 | 0 | 297 | 347 | 114 | 164 | 2.12e-14 | 74.3 |
MsG0480019156.01.T01 | MTR_2g021030 | 24.189 | 339 | 182 | 9 | 116 | 407 | 127 | 437 | 8.79e-14 | 73.6 |
MsG0480019156.01.T01 | MTR_4g008470 | 44.660 | 103 | 55 | 2 | 9 | 111 | 32 | 132 | 1.55e-13 | 70.5 |
MsG0480019156.01.T01 | MTR_4g013255 | 25.294 | 340 | 229 | 12 | 92 | 425 | 249 | 569 | 1.16e-12 | 70.5 |
MsG0480019156.01.T01 | MTR_4g008600 | 30.588 | 255 | 149 | 9 | 193 | 429 | 1 | 245 | 1.45e-12 | 68.2 |
MsG0480019156.01.T01 | MTR_5g039090 | 44.444 | 90 | 41 | 3 | 1 | 90 | 27 | 107 | 1.55e-12 | 64.7 |
MsG0480019156.01.T01 | MTR_4g009010 | 34.118 | 170 | 71 | 6 | 4 | 139 | 2 | 164 | 2.31e-12 | 65.5 |
MsG0480019156.01.T01 | MTR_1g028410 | 47.368 | 76 | 35 | 2 | 147 | 217 | 57 | 132 | 3.42e-12 | 65.9 |
MsG0480019156.01.T01 | MTR_6g034765 | 37.097 | 124 | 74 | 1 | 18 | 141 | 27 | 146 | 4.14e-12 | 64.3 |
MsG0480019156.01.T01 | MTR_4g010580 | 40.157 | 127 | 54 | 6 | 1 | 109 | 1 | 123 | 4.89e-12 | 64.3 |
MsG0480019156.01.T01 | MTR_4g010920 | 43.396 | 106 | 46 | 4 | 96 | 196 | 41 | 137 | 5.31e-12 | 63.9 |
MsG0480019156.01.T01 | MTR_7g029070 | 54.386 | 57 | 24 | 1 | 234 | 290 | 4 | 58 | 7.59e-11 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480019156.01.T01 | AT1G80630 | 30.321 | 343 | 178 | 11 | 119 | 437 | 235 | 540 | 8.19e-29 | 119 |
MsG0480019156.01.T01 | AT1G80630 | 27.932 | 469 | 265 | 14 | 10 | 423 | 3 | 453 | 1.30e-24 | 107 |
MsG0480019156.01.T01 | AT4G15475 | 26.446 | 363 | 199 | 13 | 104 | 407 | 110 | 463 | 7.56e-17 | 83.6 |
MsG0480019156.01.T01 | AT4G15475 | 20.302 | 463 | 273 | 15 | 56 | 435 | 145 | 594 | 1.02e-13 | 73.6 |
MsG0480019156.01.T01 | AT5G23340 | 24.064 | 374 | 236 | 9 | 41 | 402 | 32 | 369 | 4.81e-15 | 77.0 |
Find 86 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTTAAGAATTGTAAGTTTC+TGG | 0.138370 | 4:+15170224 | MsG0480019156.01.T01:CDS |
TCAGTTTGATTCACAATTAT+TGG | 0.148894 | 4:+15170499 | MsG0480019156.01.T01:CDS |
CAAATCAAGCAACTGCAAAT+TGG | 0.242562 | 4:-15170562 | None:intergenic |
TTTAGAGAATTCTAGCTCTT+TGG | 0.292996 | 4:+15170443 | MsG0480019156.01.T01:CDS |
ACAGTCTTGATCGAAATAAT+TGG | 0.299393 | 4:-15170340 | None:intergenic |
TAAGGAGATGTTGTGAGATT+AGG | 0.304631 | 4:+15170628 | MsG0480019156.01.T01:CDS |
ATCACCTTTGTTATATTTAC+CGG | 0.309594 | 4:+15169693 | MsG0480019156.01.T01:CDS |
AAATCAAGCAACTGCAAATT+GGG | 0.312831 | 4:-15170561 | None:intergenic |
AAGGAGATGTTGTGAGATTA+GGG | 0.313265 | 4:+15170629 | MsG0480019156.01.T01:CDS |
CAACTGCAAATTGGGGAATA+AGG | 0.324157 | 4:-15170553 | None:intergenic |
CAAGTTCAACACCTCCAGTT+TGG | 0.351725 | 4:-15170709 | None:intergenic |
TATATTTACCGGATGGTTGC+TGG | 0.358438 | 4:+15169704 | MsG0480019156.01.T01:CDS |
GAAACTTACAATTCTTAAAC+AGG | 0.381612 | 4:-15170221 | None:intergenic |
TTAGCCTACTGTTCGACAAT+TGG | 0.382455 | 4:+15170660 | MsG0480019156.01.T01:CDS |
AAGTTCAACACCTCCAGTTT+GGG | 0.389148 | 4:-15170708 | None:intergenic |
CAATGTTGTTTGCTTTCATT+AGG | 0.391555 | 4:+15170364 | MsG0480019156.01.T01:CDS |
GAACTTTGAAGTTCCCAAAC+TGG | 0.396752 | 4:+15170695 | MsG0480019156.01.T01:CDS |
CAACACTTTGAAATTGCATA+TGG | 0.399947 | 4:-15170759 | None:intergenic |
TGGAGTAAAGGCTCTTTCAT+TGG | 0.428548 | 4:+15170131 | MsG0480019156.01.T01:CDS |
TAGCCTACTGTTCGACAATT+GGG | 0.437883 | 4:+15170661 | MsG0480019156.01.T01:CDS |
TCGAGATAGTGAGAGAGAAC+CGG | 0.438751 | 4:-15169843 | None:intergenic |
GAAGTCAAGGGATGTGAGAT+TGG | 0.449095 | 4:-15169911 | None:intergenic |
TAATGAAAACATTGAAATGT+TGG | 0.465168 | 4:+15170527 | MsG0480019156.01.T01:CDS |
AGAGAATTCTAGCTCTTTGG+TGG | 0.465253 | 4:+15170446 | MsG0480019156.01.T01:CDS |
GAATTGTAAGTTTCTGGAAG+AGG | 0.470133 | 4:+15170230 | MsG0480019156.01.T01:CDS |
CAACTTCCTTGATGGAGTAA+AGG | 0.477956 | 4:+15170119 | MsG0480019156.01.T01:CDS |
TTTCCATCACCAGTGGTCTC+CGG | 0.484597 | 4:+15169824 | MsG0480019156.01.T01:CDS |
ACTCTCTGCTTCAATGGCTT+CGG | 0.487769 | 4:+15169669 | None:intergenic |
CTTGACTTCACTTTGTTCAA+CGG | 0.494189 | 4:+15169925 | MsG0480019156.01.T01:CDS |
ACAATTATCTTTCTCAGAGA+TGG | 0.494925 | 4:-15170939 | None:intergenic |
ACGGAAAACGAGAGAGTTGG+CGG | 0.497427 | 4:-15169966 | None:intergenic |
TACTGTTCGACAATTGGGCT+AGG | 0.506401 | 4:+15170666 | MsG0480019156.01.T01:CDS |
GTCTTTGAAGTCGTTGTCGT+TGG | 0.510951 | 4:-15169755 | None:intergenic |
CCTCGTCTTGTCATCTACTC+TGG | 0.512840 | 4:+15170989 | MsG0480019156.01.T01:CDS |
GAGCAGAGAGGTTAACCTTA+CGG | 0.513693 | 4:-15170167 | None:intergenic |
GAAAATTGTCGTAGCATCAC+AGG | 0.516255 | 4:+15170807 | MsG0480019156.01.T01:CDS |
ATATTTACCGGATGGTTGCT+GGG | 0.520746 | 4:+15169705 | MsG0480019156.01.T01:CDS |
TTCAAGCAAAGGAAAACAAT+CGG | 0.523509 | 4:-15170055 | None:intergenic |
GAACCGGAGACCACTGGTGA+TGG | 0.523749 | 4:-15169827 | None:intergenic |
TTGATCGAAATAATTGGTAA+AGG | 0.524532 | 4:-15170334 | None:intergenic |
TGCTATGACATATCTGAAGA+AGG | 0.540201 | 4:+15170591 | MsG0480019156.01.T01:CDS |
ATACATTCCCAGCAACCATC+CGG | 0.544641 | 4:-15169712 | None:intergenic |
GCAATTTCAAAGTGTTGTTG+TGG | 0.548737 | 4:+15170765 | MsG0480019156.01.T01:CDS |
CGTTGAACAAAGTGAAGTCA+AGG | 0.548999 | 4:-15169924 | None:intergenic |
ACTGTTCGACAATTGGGCTA+GGG | 0.549011 | 4:+15170667 | MsG0480019156.01.T01:CDS |
GCTATTGATAGATTCAATGT+TGG | 0.550060 | 4:-15170013 | None:intergenic |
CCATGTCTTGAAATCTCTCT+CGG | 0.551985 | 4:+15169783 | MsG0480019156.01.T01:CDS |
CTGTTCGACAATTGGGCTAG+GGG | 0.552072 | 4:+15170668 | MsG0480019156.01.T01:CDS |
TCAACGGAAAACGAGAGAGT+TGG | 0.555979 | 4:-15169969 | None:intergenic |
TTGTCGTAGCATCACAGGGA+AGG | 0.556675 | 4:+15170812 | MsG0480019156.01.T01:CDS |
AAGGAAAACAATCGGCTATG+AGG | 0.558786 | 4:-15170047 | None:intergenic |
AAAGAGCCTTTACTCCATCA+AGG | 0.568897 | 4:-15170125 | None:intergenic |
AGGTCGAGTTCTTCAAGCAA+AGG | 0.574871 | 4:-15170066 | None:intergenic |
CCTTTGTTATATTTACCGGA+TGG | 0.576577 | 4:+15169697 | MsG0480019156.01.T01:CDS |
CCGAGAGAGATTTCAAGACA+TGG | 0.579930 | 4:-15169783 | None:intergenic |
ACTTTGATCTCACTAAGTGA+AGG | 0.586289 | 4:-15170393 | None:intergenic |
GAGAGAGAACCGGAGACCAC+TGG | 0.589467 | 4:-15169833 | None:intergenic |
TGTCGTAGCATCACAGGGAA+GGG | 0.590378 | 4:+15170813 | MsG0480019156.01.T01:CDS |
TAGCCCAATTGTCGAACAGT+AGG | 0.594586 | 4:-15170664 | None:intergenic |
GAAAGATAATTGTCCCACCT+TGG | 0.594665 | 4:+15170949 | MsG0480019156.01.T01:CDS |
AGCAGAAACAATGCCCGCGT+TGG | 0.597175 | 4:-15170280 | None:intergenic |
ACTTACAATTCTTAAACAGG+TGG | 0.602915 | 4:-15170218 | None:intergenic |
CTTTGATCTCACTAAGTGAA+GGG | 0.604130 | 4:-15170392 | None:intergenic |
AATCAAGCAACTGCAAATTG+GGG | 0.606206 | 4:-15170560 | None:intergenic |
GTTCAACGGTTGCCTCAACA+CGG | 0.613829 | 4:+15169939 | MsG0480019156.01.T01:CDS |
AAGTTTCTTTCCATCACCAG+TGG | 0.617682 | 4:+15169817 | MsG0480019156.01.T01:CDS |
AAGGATAAAGACCTCAGCGT+TGG | 0.621912 | 4:-15170315 | None:intergenic |
CTTCAGATATGTCATAGCAA+TGG | 0.622371 | 4:-15170587 | None:intergenic |
GTGAGTGATGTGAGTTTCAA+CGG | 0.623031 | 4:-15169985 | None:intergenic |
CGTTGTCGTTGGTGTCGATG+AGG | 0.631027 | 4:-15169744 | None:intergenic |
TTCACTTAGTGAGATCAAAG+TGG | 0.634439 | 4:+15170395 | MsG0480019156.01.T01:CDS |
AAACTGAGAGACTTCAGTTG+AGG | 0.638938 | 4:-15170483 | None:intergenic |
TGTTGTCAATTAACCAACGC+GGG | 0.647694 | 4:+15170267 | MsG0480019156.01.T01:CDS |
CCATCCGGTAAATATAACAA+AGG | 0.648589 | 4:-15169697 | None:intergenic |
AAAATTGTCGTAGCATCACA+GGG | 0.652069 | 4:+15170808 | MsG0480019156.01.T01:CDS |
CTTTGAAGTTCCCAAACTGG+AGG | 0.654404 | 4:+15170698 | MsG0480019156.01.T01:CDS |
GTTGGCGGAGAACCGTGTTG+AGG | 0.656336 | 4:-15169951 | None:intergenic |
TGTTCGACAATTGGGCTAGG+GGG | 0.658791 | 4:+15170669 | MsG0480019156.01.T01:CDS |
CCAGAGTAGATGACAAGACG+AGG | 0.663707 | 4:-15170989 | None:intergenic |
GCGACAAAAGAATGAGAGTG+AGG | 0.667251 | 4:-15169872 | None:intergenic |
GTTGAACAAAGTGAAGTCAA+GGG | 0.674132 | 4:-15169923 | None:intergenic |
AGGGAAGGGAATGATGCATG+TGG | 0.686737 | 4:+15170827 | MsG0480019156.01.T01:CDS |
AACTAACAGAAGTCAATCTG+AGG | 0.693039 | 4:+15170865 | MsG0480019156.01.T01:CDS |
TACGTGAGAGACCAACGCTG+AGG | 0.708467 | 4:+15170304 | MsG0480019156.01.T01:CDS |
ATGTTGTCAATTAACCAACG+CGG | 0.733500 | 4:+15170266 | MsG0480019156.01.T01:CDS |
TGATATAGTTATGAGCAGAG+AGG | 0.752050 | 4:-15170179 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAAATCGTTGAAATTTTTA+GGG | - | Chr4:15170098-15170117 | None:intergenic | 15.0% |
!! | TAATGAAAACATTGAAATGT+TGG | + | Chr4:15170527-15170546 | MsG0480019156.01.T01:CDS | 20.0% |
!!! | CTAAAATCGTTGAAATTTTT+AGG | - | Chr4:15170099-15170118 | None:intergenic | 20.0% |
! | ACCTTGGTATAACAAAAATA+GGG | + | Chr4:15170965-15170984 | MsG0480019156.01.T01:CDS | 25.0% |
! | GAAACTTACAATTCTTAAAC+AGG | - | Chr4:15170224-15170243 | None:intergenic | 25.0% |
! | GTTTAAGAATTGTAAGTTTC+TGG | + | Chr4:15170224-15170243 | MsG0480019156.01.T01:CDS | 25.0% |
! | TCAGTTTGATTCACAATTAT+TGG | + | Chr4:15170499-15170518 | MsG0480019156.01.T01:CDS | 25.0% |
! | TTGATCGAAATAATTGGTAA+AGG | - | Chr4:15170337-15170356 | None:intergenic | 25.0% |
!! | ATCACCTTTGTTATATTTAC+CGG | + | Chr4:15169693-15169712 | MsG0480019156.01.T01:CDS | 25.0% |
!!! | AAGGTATTTGTCAAGTTTTA+AGG | + | Chr4:15170610-15170629 | MsG0480019156.01.T01:CDS | 25.0% |
!!! | TATTTTTGTTATACCAAGGT+GGG | - | Chr4:15170965-15170984 | None:intergenic | 25.0% |
!!! | TGAAATTTTTAGGGTTACTA+AGG | - | Chr4:15170089-15170108 | None:intergenic | 25.0% |
AAATCAAGCAACTGCAAATT+GGG | - | Chr4:15170564-15170583 | None:intergenic | 30.0% | |
ACAATTATCTTTCTCAGAGA+TGG | - | Chr4:15170942-15170961 | None:intergenic | 30.0% | |
ACAGTCTTGATCGAAATAAT+TGG | - | Chr4:15170343-15170362 | None:intergenic | 30.0% | |
ACTTACAATTCTTAAACAGG+TGG | - | Chr4:15170221-15170240 | None:intergenic | 30.0% | |
CACCTTGGTATAACAAAAAT+AGG | + | Chr4:15170964-15170983 | MsG0480019156.01.T01:CDS | 30.0% | |
GCTATTGATAGATTCAATGT+TGG | - | Chr4:15170016-15170035 | None:intergenic | 30.0% | |
TTCAAGCAAAGGAAAACAAT+CGG | - | Chr4:15170058-15170077 | None:intergenic | 30.0% | |
! | CAATGTTGTTTGCTTTCATT+AGG | + | Chr4:15170364-15170383 | MsG0480019156.01.T01:CDS | 30.0% |
!! | CAACACTTTGAAATTGCATA+TGG | - | Chr4:15170762-15170781 | None:intergenic | 30.0% |
!! | TTGACTCGATGATATTTTCA+AGG | + | Chr4:15170916-15170935 | MsG0480019156.01.T01:CDS | 30.0% |
!! | TTTAGAGAATTCTAGCTCTT+TGG | + | Chr4:15170443-15170462 | MsG0480019156.01.T01:CDS | 30.0% |
!!! | CTATTTTTGTTATACCAAGG+TGG | - | Chr4:15170966-15170985 | None:intergenic | 30.0% |
!!! | TCCCTATTTTTGTTATACCA+AGG | - | Chr4:15170969-15170988 | None:intergenic | 30.0% |
!!! | TGGACTTTTAAAGTTGTTAC+TGG | + | Chr4:15170785-15170804 | MsG0480019156.01.T01:CDS | 30.0% |
AAAATTGTCGTAGCATCACA+GGG | + | Chr4:15170808-15170827 | MsG0480019156.01.T01:CDS | 35.0% | |
AACTAACAGAAGTCAATCTG+AGG | + | Chr4:15170865-15170884 | MsG0480019156.01.T01:CDS | 35.0% | |
AAGGAGATGTTGTGAGATTA+GGG | + | Chr4:15170629-15170648 | MsG0480019156.01.T01:CDS | 35.0% | |
AATCAAGCAACTGCAAATTG+GGG | - | Chr4:15170563-15170582 | None:intergenic | 35.0% | |
ACTTTGATCTCACTAAGTGA+AGG | - | Chr4:15170396-15170415 | None:intergenic | 35.0% | |
ATGTTGTCAATTAACCAACG+CGG | + | Chr4:15170266-15170285 | MsG0480019156.01.T01:CDS | 35.0% | |
CAAATCAAGCAACTGCAAAT+TGG | - | Chr4:15170565-15170584 | None:intergenic | 35.0% | |
CCATCCGGTAAATATAACAA+AGG | - | Chr4:15169700-15169719 | None:intergenic | 35.0% | |
CTTCAGATATGTCATAGCAA+TGG | - | Chr4:15170590-15170609 | None:intergenic | 35.0% | |
CTTGACTTCACTTTGTTCAA+CGG | + | Chr4:15169925-15169944 | MsG0480019156.01.T01:CDS | 35.0% | |
CTTTGATCTCACTAAGTGAA+GGG | - | Chr4:15170395-15170414 | None:intergenic | 35.0% | |
GTTGAACAAAGTGAAGTCAA+GGG | - | Chr4:15169926-15169945 | None:intergenic | 35.0% | |
TAAGGAGATGTTGTGAGATT+AGG | + | Chr4:15170628-15170647 | MsG0480019156.01.T01:CDS | 35.0% | |
TGATATAGTTATGAGCAGAG+AGG | - | Chr4:15170182-15170201 | None:intergenic | 35.0% | |
TGCTATGACATATCTGAAGA+AGG | + | Chr4:15170591-15170610 | MsG0480019156.01.T01:CDS | 35.0% | |
TTCACTTAGTGAGATCAAAG+TGG | + | Chr4:15170395-15170414 | MsG0480019156.01.T01:CDS | 35.0% | |
! | CCTTTGTTATATTTACCGGA+TGG | + | Chr4:15169697-15169716 | MsG0480019156.01.T01:CDS | 35.0% |
! | GAATTGTAAGTTTCTGGAAG+AGG | + | Chr4:15170230-15170249 | MsG0480019156.01.T01:CDS | 35.0% |
! | TCTTTTGTCGCGATTTTCAA+AGG | + | Chr4:15169884-15169903 | MsG0480019156.01.T01:CDS | 35.0% |
!! | GATTTTAGCAACTTCCTTGA+TGG | + | Chr4:15170111-15170130 | MsG0480019156.01.T01:CDS | 35.0% |
!! | GCAATTTCAAAGTGTTGTTG+TGG | + | Chr4:15170765-15170784 | MsG0480019156.01.T01:CDS | 35.0% |
AAACTGAGAGACTTCAGTTG+AGG | - | Chr4:15170486-15170505 | None:intergenic | 40.0% | |
AAAGAGCCTTTACTCCATCA+AGG | - | Chr4:15170128-15170147 | None:intergenic | 40.0% | |
AAGGAAAACAATCGGCTATG+AGG | - | Chr4:15170050-15170069 | None:intergenic | 40.0% | |
AAGTTCAACACCTCCAGTTT+GGG | - | Chr4:15170711-15170730 | None:intergenic | 40.0% | |
AAGTTTCTTTCCATCACCAG+TGG | + | Chr4:15169817-15169836 | MsG0480019156.01.T01:CDS | 40.0% | |
ATATTTACCGGATGGTTGCT+GGG | + | Chr4:15169705-15169724 | MsG0480019156.01.T01:CDS | 40.0% | |
CAACTGCAAATTGGGGAATA+AGG | - | Chr4:15170556-15170575 | None:intergenic | 40.0% | |
CAACTTCCTTGATGGAGTAA+AGG | + | Chr4:15170119-15170138 | MsG0480019156.01.T01:CDS | 40.0% | |
CCATGTCTTGAAATCTCTCT+CGG | + | Chr4:15169783-15169802 | MsG0480019156.01.T01:CDS | 40.0% | |
CGTTGAACAAAGTGAAGTCA+AGG | - | Chr4:15169927-15169946 | None:intergenic | 40.0% | |
GAAAATTGTCGTAGCATCAC+AGG | + | Chr4:15170807-15170826 | MsG0480019156.01.T01:CDS | 40.0% | |
GAAAGATAATTGTCCCACCT+TGG | + | Chr4:15170949-15170968 | MsG0480019156.01.T01:CDS | 40.0% | |
GTGAGTGATGTGAGTTTCAA+CGG | - | Chr4:15169988-15170007 | None:intergenic | 40.0% | |
TAGCCTACTGTTCGACAATT+GGG | + | Chr4:15170661-15170680 | MsG0480019156.01.T01:CDS | 40.0% | |
TATATTTACCGGATGGTTGC+TGG | + | Chr4:15169704-15169723 | MsG0480019156.01.T01:CDS | 40.0% | |
TGGAGTAAAGGCTCTTTCAT+TGG | + | Chr4:15170131-15170150 | MsG0480019156.01.T01:CDS | 40.0% | |
TGTTGTCAATTAACCAACGC+GGG | + | Chr4:15170267-15170286 | MsG0480019156.01.T01:CDS | 40.0% | |
TTAGCCTACTGTTCGACAAT+TGG | + | Chr4:15170660-15170679 | MsG0480019156.01.T01:CDS | 40.0% | |
!! | AGAGAATTCTAGCTCTTTGG+TGG | + | Chr4:15170446-15170465 | MsG0480019156.01.T01:CDS | 40.0% |
!! | GAACTTTGAAGTTCCCAAAC+TGG | + | Chr4:15170695-15170714 | MsG0480019156.01.T01:CDS | 40.0% |
AAGGATAAAGACCTCAGCGT+TGG | - | Chr4:15170318-15170337 | None:intergenic | 45.0% | |
ACTGTTCGACAATTGGGCTA+GGG | + | Chr4:15170667-15170686 | MsG0480019156.01.T01:CDS | 45.0% | |
AGGTCGAGTTCTTCAAGCAA+AGG | - | Chr4:15170069-15170088 | None:intergenic | 45.0% | |
ATACATTCCCAGCAACCATC+CGG | - | Chr4:15169715-15169734 | None:intergenic | 45.0% | |
CAAGTTCAACACCTCCAGTT+TGG | - | Chr4:15170712-15170731 | None:intergenic | 45.0% | |
CCGAGAGAGATTTCAAGACA+TGG | - | Chr4:15169786-15169805 | None:intergenic | 45.0% | |
GAAGTCAAGGGATGTGAGAT+TGG | - | Chr4:15169914-15169933 | None:intergenic | 45.0% | |
GAGCAGAGAGGTTAACCTTA+CGG | - | Chr4:15170170-15170189 | None:intergenic | 45.0% | |
GCGACAAAAGAATGAGAGTG+AGG | - | Chr4:15169875-15169894 | None:intergenic | 45.0% | |
TACTGTTCGACAATTGGGCT+AGG | + | Chr4:15170666-15170685 | MsG0480019156.01.T01:CDS | 45.0% | |
TAGCCCAATTGTCGAACAGT+AGG | - | Chr4:15170667-15170686 | None:intergenic | 45.0% | |
TCAACGGAAAACGAGAGAGT+TGG | - | Chr4:15169972-15169991 | None:intergenic | 45.0% | |
TCGAGATAGTGAGAGAGAAC+CGG | - | Chr4:15169846-15169865 | None:intergenic | 45.0% | |
! | GGCACTTTTCAAACTCCGTA+AGG | + | Chr4:15170152-15170171 | MsG0480019156.01.T01:CDS | 45.0% |
!! | CTTTGAAGTTCCCAAACTGG+AGG | + | Chr4:15170698-15170717 | MsG0480019156.01.T01:CDS | 45.0% |
!! | GTCTTTGAAGTCGTTGTCGT+TGG | - | Chr4:15169758-15169777 | None:intergenic | 45.0% |
ACGGAAAACGAGAGAGTTGG+CGG | - | Chr4:15169969-15169988 | None:intergenic | 50.0% | |
AGGGAAGGGAATGATGCATG+TGG | + | Chr4:15170827-15170846 | MsG0480019156.01.T01:CDS | 50.0% | |
CCAGAGTAGATGACAAGACG+AGG | - | Chr4:15170992-15171011 | None:intergenic | 50.0% | |
CCTCGTCTTGTCATCTACTC+TGG | + | Chr4:15170989-15171008 | MsG0480019156.01.T01:CDS | 50.0% | |
GTTCAACGGTTGCCTCAACA+CGG | + | Chr4:15169939-15169958 | MsG0480019156.01.T01:CDS | 50.0% | |
TGTCGTAGCATCACAGGGAA+GGG | + | Chr4:15170813-15170832 | MsG0480019156.01.T01:CDS | 50.0% | |
TTGTCGTAGCATCACAGGGA+AGG | + | Chr4:15170812-15170831 | MsG0480019156.01.T01:CDS | 50.0% | |
TTTCCATCACCAGTGGTCTC+CGG | + | Chr4:15169824-15169843 | MsG0480019156.01.T01:CDS | 50.0% | |
! | CTGTTCGACAATTGGGCTAG+GGG | + | Chr4:15170668-15170687 | MsG0480019156.01.T01:CDS | 50.0% |
! | TGTTCGACAATTGGGCTAGG+GGG | + | Chr4:15170669-15170688 | MsG0480019156.01.T01:CDS | 50.0% |
AGCAGAAACAATGCCCGCGT+TGG | - | Chr4:15170283-15170302 | None:intergenic | 55.0% | |
TACGTGAGAGACCAACGCTG+AGG | + | Chr4:15170304-15170323 | MsG0480019156.01.T01:CDS | 55.0% | |
!! | CGTTGTCGTTGGTGTCGATG+AGG | - | Chr4:15169747-15169766 | None:intergenic | 55.0% |
GAACCGGAGACCACTGGTGA+TGG | - | Chr4:15169830-15169849 | None:intergenic | 60.0% | |
GAGAGAGAACCGGAGACCAC+TGG | - | Chr4:15169836-15169855 | None:intergenic | 60.0% | |
GTTGGCGGAGAACCGTGTTG+AGG | - | Chr4:15169954-15169973 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 15169682 | 15171022 | 15169682 | ID=MsG0480019156.01;Name=MsG0480019156.01 |
Chr4 | mRNA | 15169682 | 15171022 | 15169682 | ID=MsG0480019156.01.T01;Parent=MsG0480019156.01;Name=MsG0480019156.01.T01;_AED=0.37;_eAED=0.37;_QI=0|-1|0|1|-1|1|1|0|446 |
Chr4 | exon | 15169682 | 15171022 | 15169682 | ID=MsG0480019156.01.T01:exon:4072;Parent=MsG0480019156.01.T01 |
Chr4 | CDS | 15169682 | 15171022 | 15169682 | ID=MsG0480019156.01.T01:cds;Parent=MsG0480019156.01.T01 |
Gene Sequence |
Protein sequence |