AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019192.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019192.01.T01 MTR_8g096920 87.898 157 19 0 124 280 17 173 7.26e-100 290
MsG0480019192.01.T01 MTR_8g096910 78.750 160 34 0 121 280 17 176 8.46e-94 275
MsG0480019192.01.T01 MTR_8g096930 98.198 111 2 0 2 112 1215 1325 1.51e-70 236
MsG0480019192.01.T01 MTR_8g096900 48.529 204 57 4 124 280 46 248 1.12e-55 180
MsG0480019192.01.T01 MTR_5g010635 44.390 205 65 3 124 280 22 225 1.38e-46 156
MsG0480019192.01.T01 MTR_5g010640 51.799 139 64 2 124 260 24 161 1.17e-41 143
MsG0480019192.01.T01 MTR_2g067990 41.206 199 72 7 125 280 26 222 1.48e-32 126
MsG0480019192.01.T01 MTR_5g059200 48.696 115 51 3 125 235 28 138 2.62e-26 104
MsG0480019192.01.T01 MTR_6g079580 41.463 123 61 4 122 236 18 137 1.81e-25 101
MsG0480019192.01.T01 MTR_8g107140 44.348 115 53 4 130 236 31 142 5.81e-25 100
MsG0480019192.01.T01 MTR_1g021945 46.774 124 56 3 124 238 24 146 1.09e-24 99.8
MsG0480019192.01.T01 MTR_7g062610 39.865 148 75 5 115 253 12 154 2.06e-24 99.0
MsG0480019192.01.T01 MTR_2g067980 35.683 227 73 10 125 280 23 247 3.05e-24 102
MsG0480019192.01.T01 MTR_5g022350 34.419 215 79 10 126 280 31 243 3.11e-24 99.8
MsG0480019192.01.T01 MTR_4g073720 41.509 159 75 7 105 247 4 160 9.15e-24 99.0
MsG0480019192.01.T01 MTR_5g022350 47.541 122 55 7 126 241 96 214 1.27e-23 96.3
MsG0480019192.01.T01 MTR_8g037890 41.538 130 66 4 115 235 15 143 3.92e-23 97.1
MsG0480019192.01.T01 MTR_8g075510 43.382 136 62 7 125 247 30 163 4.03e-23 95.5
MsG0480019192.01.T01 MTR_8g075510 42.657 143 64 8 125 254 30 167 7.27e-23 95.9
MsG0480019192.01.T01 MTR_3g111620 40.278 144 63 5 128 254 29 166 8.71e-23 94.7
MsG0480019192.01.T01 MTR_8g075550 39.181 171 80 7 125 279 27 189 8.73e-23 95.9
MsG0480019192.01.T01 MTR_4g073730 42.958 142 66 7 114 243 15 153 8.93e-23 95.5
MsG0480019192.01.T01 MTR_4g073730 42.958 142 66 7 114 243 15 153 1.47e-22 95.5
MsG0480019192.01.T01 MTR_1g025420 42.336 137 61 5 128 247 25 160 4.04e-22 93.2
MsG0480019192.01.T01 MTR_1g025420 42.336 137 61 5 128 247 25 160 7.00e-22 93.6
MsG0480019192.01.T01 MTR_5g022310 36.709 158 78 6 115 254 15 168 7.07e-22 92.4
MsG0480019192.01.T01 MTR_5g022310 36.709 158 78 6 115 254 15 168 1.04e-21 92.8
MsG0480019192.01.T01 MTR_3g068015 39.416 137 68 6 127 253 29 160 7.95e-21 89.4
MsG0480019192.01.T01 MTR_3g114030 42.735 117 57 4 128 235 9 124 9.99e-21 88.6
MsG0480019192.01.T01 MTR_8g036215 38.816 152 73 7 125 261 19 165 1.20e-20 88.6
MsG0480019192.01.T01 MTR_8g056820 43.590 117 56 4 128 235 28 143 2.44e-20 88.2
MsG0480019192.01.T01 MTR_2g068030 38.272 162 78 7 127 270 24 181 2.61e-20 87.8
MsG0480019192.01.T01 MTR_2g068655 36.970 165 82 7 125 271 30 190 2.63e-19 86.3
MsG0480019192.01.T01 MTR_2g069660 31.416 226 86 8 123 280 19 243 7.96e-19 83.6
MsG0480019192.01.T01 MTR_6g009480 37.589 141 77 5 117 247 20 159 1.87e-18 83.2
MsG0480019192.01.T01 MTR_4g063630 37.398 123 67 4 123 236 26 147 4.75e-18 81.6
MsG0480019192.01.T01 MTR_1g062350 35.366 164 73 7 126 280 22 161 2.33e-17 79.7
MsG0480019192.01.T01 MTR_1g062630 40.000 120 61 6 126 236 22 139 3.04e-17 79.7
MsG0480019192.01.T01 MTR_7g102380 39.496 119 61 6 126 235 21 137 3.08e-17 79.3
MsG0480019192.01.T01 MTR_5g023850 32.632 190 90 8 128 280 28 216 6.51e-17 78.2
MsG0480019192.01.T01 MTR_1g062370 34.756 164 74 7 126 280 22 161 7.26e-17 78.2
MsG0480019192.01.T01 MTR_1g062340 39.496 119 61 5 126 235 22 138 1.49e-16 77.4
MsG0480019192.01.T01 MTR_1g062660 34.146 164 75 7 126 280 22 161 5.05e-16 75.9
MsG0480019192.01.T01 MTR_1g062590 36.800 125 68 5 121 236 17 139 1.81e-15 74.3
MsG0480019192.01.T01 MTR_2g067970 43.011 93 48 5 165 254 5 95 2.58e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019192.01.T01 AT4G11650 46.078 204 60 4 125 280 22 223 5.48e-51 168
MsG0480019192.01.T01 AT1G77700 51.724 116 48 3 125 236 60 171 1.15e-31 120
MsG0480019192.01.T01 AT1G77700 50.000 120 52 3 121 236 84 199 1.36e-31 120
MsG0480019192.01.T01 AT1G77700 50.000 120 52 3 121 236 56 171 1.38e-31 119
MsG0480019192.01.T01 AT1G75050 48.739 119 54 2 123 235 22 139 2.92e-27 106
MsG0480019192.01.T01 AT1G75030 45.082 122 59 3 121 235 19 139 1.10e-25 102
MsG0480019192.01.T01 AT4G36010 50.847 118 47 5 128 235 25 141 1.76e-25 102
MsG0480019192.01.T01 AT4G36010 50.847 118 47 5 128 235 25 141 1.76e-25 102
MsG0480019192.01.T01 AT1G73620 44.262 122 57 4 122 235 38 156 9.48e-25 100
MsG0480019192.01.T01 AT4G38660 40.667 150 71 5 114 247 18 165 1.33e-24 101
MsG0480019192.01.T01 AT1G18250 44.355 124 58 4 120 235 16 136 1.65e-24 99.0
MsG0480019192.01.T01 AT4G38660 43.382 136 59 5 128 247 10 143 2.51e-24 100
MsG0480019192.01.T01 AT1G18250 45.378 119 54 4 125 235 20 135 4.19e-24 98.2
MsG0480019192.01.T01 AT1G75800 41.447 152 69 6 115 247 10 160 8.49e-24 99.0
MsG0480019192.01.T01 AT1G75040 34.389 221 76 8 125 280 23 239 7.20e-23 94.7
MsG0480019192.01.T01 AT2G17860 47.458 118 51 5 128 235 25 141 3.94e-22 92.8
MsG0480019192.01.T01 AT5G24620 39.744 156 75 7 114 254 16 167 6.75e-22 94.7
MsG0480019192.01.T01 AT5G24620 39.490 157 76 7 114 255 71 223 9.22e-22 94.7
MsG0480019192.01.T01 AT5G24620 39.490 157 76 7 114 255 92 244 9.82e-22 94.7
MsG0480019192.01.T01 AT4G38670 44.361 133 60 7 115 235 11 141 3.98e-21 90.9
MsG0480019192.01.T01 AT4G38670 44.361 133 60 7 115 235 11 141 3.98e-21 90.9
MsG0480019192.01.T01 AT4G38670 47.059 119 50 6 128 235 9 125 4.64e-21 90.1
MsG0480019192.01.T01 AT1G20030 42.735 117 57 4 128 235 5 120 9.10e-21 90.1
MsG0480019192.01.T01 AT1G20030 42.735 117 57 4 128 235 22 137 1.26e-20 90.1
MsG0480019192.01.T01 AT5G02140 36.306 157 85 6 126 268 21 176 1.51e-20 88.6
MsG0480019192.01.T01 AT5G02140 36.306 157 85 6 126 268 21 176 1.65e-20 89.4
MsG0480019192.01.T01 AT5G38280 41.739 115 57 4 128 233 27 140 1.82e-20 91.7
MsG0480019192.01.T01 AT5G38280 41.739 115 57 4 128 233 27 140 2.05e-20 91.3
MsG0480019192.01.T01 AT1G19320 41.667 120 58 5 128 236 28 146 6.12e-20 87.0
MsG0480019192.01.T01 AT5G40020 35.099 151 78 6 128 262 30 176 1.33e-19 86.3
MsG0480019192.01.T01 AT2G28790 33.766 154 87 7 115 254 41 193 1.11e-18 84.0
MsG0480019192.01.T01 AT2G28790 35.606 132 74 5 115 236 16 146 1.23e-18 83.2
MsG0480019192.01.T01 AT4G24180 37.410 139 71 6 115 238 17 154 9.16e-18 81.3
MsG0480019192.01.T01 AT4G24180 37.410 139 71 6 115 238 17 154 1.05e-17 82.0
MsG0480019192.01.T01 AT4G24180 39.062 128 62 6 126 238 33 159 1.23e-17 80.9
MsG0480019192.01.T01 AT4G24180 39.062 128 62 6 126 238 33 159 1.25e-17 81.6
MsG0480019192.01.T01 AT4G24180 37.410 139 71 6 115 238 17 154 1.73e-17 81.3
MsG0480019192.01.T01 AT4G24180 39.062 128 62 6 126 238 33 159 2.67e-17 80.9
MsG0480019192.01.T01 AT1G70250 34.074 135 79 5 128 254 147 279 2.63e-15 76.3

Find 95 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACTTCATCAGGTCGAATT+TGG 0.148264 4:-15781645 MsG0480019192.01.T01:CDS
ACTTAACGGTGGAAACAATT+TGG 0.219094 4:-15781503 MsG0480019192.01.T01:CDS
GACCCATGTTTATGAATTCT+TGG 0.224293 4:-15787247 None:intergenic
TTTGCATTTAAGACTCTTAC+AGG 0.232400 4:-15787206 MsG0480019192.01.T01:CDS
GTATCAGCGTTGCCAGATTT+TGG 0.244275 4:-15787104 MsG0480019192.01.T01:CDS
AACTTCATCAGGTCGAATTT+GGG 0.288054 4:-15781644 MsG0480019192.01.T01:CDS
TACTTTGTTGCATCCATTAG+AGG 0.301618 4:+15781423 None:intergenic
TTTGAAAATTATTATTGAAC+TGG 0.307637 4:+15786934 None:intergenic
CAACTTAGTTCAACCTCTAA+TGG 0.319722 4:-15781436 MsG0480019192.01.T01:CDS
AAGAGTGAGCGGACTCTTAC+CGG 0.332233 4:+15781537 None:intergenic
CTCATTGATGACTGCTGCCC+TGG 0.347569 4:+15787020 None:intergenic
CCACCACTGGGTGTGGCGGC+TGG 0.371735 4:+15781718 None:intergenic
CAACTCCGGGACAACCTTGC+AGG 0.372248 4:+15786976 None:intergenic
CAACTGCCGACCTCCACCAC+TGG 0.374879 4:+15781705 None:intergenic
TCCACCGTTAAGTGTGAATT+CGG 0.380057 4:+15781513 None:intergenic
GTTGATTTATCTGTGATTGA+TGG 0.390738 4:-15781475 MsG0480019192.01.T01:CDS
GGTTGCACCTTCGACGGTTC+AGG 0.394877 4:-15781613 MsG0480019192.01.T01:CDS
GAGGAAAATTTAGCAGTTCA+AGG 0.403757 4:-15787170 MsG0480019192.01.T01:CDS
GGCAATGGTAATTGTCAAAC+TGG 0.406321 4:-15781592 MsG0480019192.01.T01:CDS
CCTCCATCATGACAGTTAAC+AGG 0.423982 4:+15787134 None:intergenic
CATGACAGTTAACAGGTTCC+TGG 0.424130 4:+15787141 None:intergenic
CTTACCGAATTCACACTTAA+CGG 0.429312 4:-15781517 MsG0480019192.01.T01:CDS
AAACTGGAAGATCCAAAATC+TGG 0.430033 4:+15787092 None:intergenic
GTCCTCAGTTGCAGCTTATC+CGG 0.434820 4:-15781556 MsG0480019192.01.T01:CDS
TTGGGTTGATGATAAGCATC+AGG 0.436290 4:+15781376 None:intergenic
GGTCGAATTTGGGGCCGAAC+TGG 0.442440 4:-15781634 MsG0480019192.01.T01:CDS
ACAGGAGGCAAGTCCATGCC+AGG 0.447156 4:-15787038 MsG0480019192.01.T01:CDS
ACAAAAGACAACTTTGTAGT+TGG 0.448816 4:+15781321 None:intergenic
ATCCCAGCTGGAACTTCATC+AGG 0.462218 4:-15781655 MsG0480019192.01.T01:CDS
GAGGTTGAACTAAGTTGCAT+TGG 0.462843 4:+15781442 None:intergenic
TGATGACTGCTGCCCTGGCA+TGG 0.471120 4:+15787025 None:intergenic
GGGTGTGGCGGCTGGCCACA+CGG 0.473683 4:+15781726 None:intergenic
GCCACACGGTGTAGCCGCAT+TGG 0.474171 4:+15781740 None:intergenic
CCGACCTCCACCACTGGGTG+TGG 0.484909 4:+15781711 None:intergenic
CTGAGCCTGCAAGGTTGTCC+CGG 0.491049 4:-15786981 MsG0480019192.01.T01:CDS
TGATATCTGCTCAGGCAGCT+AGG 0.492068 4:-15781777 MsG0480019192.01.T01:intron
AACTGCCGACCTCCACCACT+GGG 0.492264 4:+15781706 None:intergenic
CCAGAGTCCATGTTTGACCT+TGG 0.495410 4:+15781680 None:intergenic
GCCGCCACACCCAGTGGTGG+AGG 0.497834 4:-15781715 MsG0480019192.01.T01:CDS
CGTCGAAGGTGCAACCAGTT+CGG 0.498999 4:+15781620 None:intergenic
TTCTCATTTCACTTTGACAC+AGG 0.502289 4:-15787056 MsG0480019192.01.T01:CDS
CGACCTGATGAAGTTCCAGC+TGG 0.502812 4:+15781652 None:intergenic
ACTTTGTAGTTGGTACCACC+TGG 0.508562 4:+15781331 None:intergenic
AACTGGGAATATTGTTGTTG+TGG 0.509003 4:+15786951 None:intergenic
CGAACTGGTTGCACCTTCGA+CGG 0.509502 4:-15781619 MsG0480019192.01.T01:CDS
GCAACAAAGTATTAAACTGC+GGG 0.515893 4:-15781411 MsG0480019192.01.T01:CDS
ACCTTCGACGGTTCAGGCAA+TGG 0.516066 4:-15781607 MsG0480019192.01.T01:CDS
TTGAAAATTATTATTGAACT+GGG 0.516712 4:+15786935 None:intergenic
TGGACTCTGGACATCCCAGC+TGG 0.517689 4:-15781667 MsG0480019192.01.T01:CDS
GGAAAATTTAGCAGTTCAAG+GGG 0.517942 4:-15787168 MsG0480019192.01.T01:CDS
TTCCCATCTCTGAGCCTGCA+AGG 0.518273 4:-15786990 MsG0480019192.01.T01:CDS
TGTTGTTGTGGATCAACTCC+GGG 0.525407 4:+15786963 None:intergenic
TTAAATGCAAATTCTAAGCA+TGG 0.525992 4:+15787218 None:intergenic
CAACCTTGCAGGCTCAGAGA+TGG 0.530486 4:+15786987 None:intergenic
AACCTTGCAGGCTCAGAGAT+GGG 0.537883 4:+15786988 None:intergenic
TTGTTGTTGTGGATCAACTC+CGG 0.537959 4:+15786962 None:intergenic
AGGAAAATTTAGCAGTTCAA+GGG 0.541169 4:-15787169 MsG0480019192.01.T01:CDS
CAGTGGTGGAGGTCGGCAGT+TGG 0.546103 4:-15781704 MsG0480019192.01.T01:CDS
GAACCTGTTAACTGTCATGA+TGG 0.554557 4:-15787137 MsG0480019192.01.T01:CDS
CTGTTAACTGTCATGATGGA+GGG 0.557709 4:-15787133 MsG0480019192.01.T01:CDS
TCAAGAGTCATTTCAAAACA+AGG 0.558797 4:-15783224 MsG0480019192.01.T01:intron
ACCTCCACCACTGGGTGTGG+CGG 0.560580 4:+15781714 None:intergenic
TAAATGCAAATTCTAAGCAT+GGG 0.560755 4:+15787219 None:intergenic
CCAAGGTCAAACATGGACTC+TGG 0.568915 4:-15781680 MsG0480019192.01.T01:CDS
AACTGTCATGATGGAGGGGA+TGG 0.576525 4:-15787128 MsG0480019192.01.T01:CDS
TGACCAAGAATTCATAAACA+TGG 0.577887 4:+15787244 None:intergenic
CCAGCCGCCACACCCAGTGG+TGG 0.581084 4:-15781718 MsG0480019192.01.T01:CDS
TACAGGTGTGATTCCAGTAG+AGG 0.585100 4:-15787189 MsG0480019192.01.T01:CDS
CCACACCCAGTGGTGGAGGT+CGG 0.594695 4:-15781711 MsG0480019192.01.T01:CDS
TCATTTCACTTTGACACAGG+AGG 0.596195 4:-15787053 MsG0480019192.01.T01:CDS
GACCAAGAATTCATAAACAT+GGG 0.596368 4:+15787245 None:intergenic
TACCGGATAAGCTGCAACTG+AGG 0.596730 4:+15781554 None:intergenic
ACCATTGCCTGAACCGTCGA+AGG 0.597990 4:+15781606 None:intergenic
TGCAGGCTCAGAGATGGGAA+TGG 0.600438 4:+15786993 None:intergenic
GTTAAAACGAATACATGCCC+AGG 0.604035 4:-15781349 MsG0480019192.01.T01:CDS
CCTGTTAACTGTCATGATGG+AGG 0.606160 4:-15787134 MsG0480019192.01.T01:CDS
TGGCCAGCCGCCACACCCAG+TGG 0.620024 4:-15781721 MsG0480019192.01.T01:CDS
AGTTGGACCAAGGTCAAACA+TGG 0.621156 4:-15781687 MsG0480019192.01.T01:CDS
ACTTCATCAGGTCGAATTTG+GGG 0.621329 4:-15781643 MsG0480019192.01.T01:CDS
ACCAATGCGGCTACACCGTG+TGG 0.625115 4:-15781741 MsG0480019192.01.T01:CDS
GGAGGTCGGCAGTTGGACCA+AGG 0.633114 4:-15781697 MsG0480019192.01.T01:CDS
GACCTGATGAAGTTCCAGCT+GGG 0.635258 4:+15781653 None:intergenic
GTGAATTCGGTAAGAGTGAG+CGG 0.641384 4:+15781526 None:intergenic
CAGGAGGCAAGTCCATGCCA+GGG 0.650398 4:-15787037 MsG0480019192.01.T01:CDS
TGGGTTGATGATAAGCATCA+GGG 0.651917 4:+15781377 None:intergenic
TGCAACAAAGTATTAAACTG+CGG 0.658121 4:-15781412 MsG0480019192.01.T01:CDS
CTTTGTAGTTGGTACCACCT+GGG 0.662098 4:+15781332 None:intergenic
TGTTAACTGTCATGATGGAG+GGG 0.666653 4:-15787132 MsG0480019192.01.T01:CDS
AATTGTCAAACTGGTGATTG+CGG 0.670033 4:-15781583 MsG0480019192.01.T01:CDS
ACCGAATTCACACTTAACGG+TGG 0.677282 4:-15781514 MsG0480019192.01.T01:CDS
TGTCAAACTGGTGATTGCGG+TGG 0.712111 4:-15781580 MsG0480019192.01.T01:CDS
CAACAAAGTATTAAACTGCG+GGG 0.718105 4:-15781410 MsG0480019192.01.T01:CDS
AAAACGAATACATGCCCAGG+TGG 0.726701 4:-15781346 MsG0480019192.01.T01:CDS
TTTGACATTGTAAACCAATG+CGG 0.728342 4:-15781754 MsG0480019192.01.T01:CDS
GAAAATTTAGCAGTTCAAGG+GGG 0.735832 4:-15787167 MsG0480019192.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTATAATTTTAAATA+AGG - Chr4:15785636-15785655 MsG0480019192.01.T01:intron 0.0%
!! TAAAACAAAGTATAAAATAT+CGG + Chr4:15782159-15782178 None:intergenic 10.0%
!!! AAAATCTCTAAAAAAAAATA+CGG - Chr4:15782540-15782559 MsG0480019192.01.T01:intron 10.0%
!!! TAACTGTTATTTTATATTTT+TGG + Chr4:15786171-15786190 None:intergenic 10.0%
!!! TCTCATTTAATTTATTTTAT+CGG + Chr4:15786367-15786386 None:intergenic 10.0%
!! ATAAATGATAGTATAAACAA+GGG + Chr4:15783159-15783178 None:intergenic 15.0%
!! ATAACATTAAGATGAATAAA+TGG - Chr4:15785959-15785978 MsG0480019192.01.T01:intron 15.0%
!! ATGAAAGAAAAATATATACA+TGG + Chr4:15785873-15785892 None:intergenic 15.0%
!! CGATAAAATAAATAAATAGA+CGG + Chr4:15786075-15786094 None:intergenic 15.0%
!! TAACATTAAGATGAATAAAT+GGG - Chr4:15785960-15785979 MsG0480019192.01.T01:intron 15.0%
!! TATTTAAATTCATACAAAAC+AGG + Chr4:15784442-15784461 None:intergenic 15.0%
!! TGGAAAAAAAATTCAAATTA+GGG + Chr4:15785703-15785722 None:intergenic 15.0%
!! TGTTATGGAAAAAATTTAAT+AGG + Chr4:15784258-15784277 None:intergenic 15.0%
!! TTGAAAATTATTATTGAACT+GGG + Chr4:15781625-15781644 None:intergenic 15.0%
!! TTTGAAAATTATTATTGAAC+TGG + Chr4:15781626-15781645 None:intergenic 15.0%
!! TTTGAAAGAAAATTTAACAT+TGG + Chr4:15785178-15785197 None:intergenic 15.0%
!!! AAATAGAGAGTATTTTTTTT+AGG - Chr4:15783350-15783369 MsG0480019192.01.T01:intron 15.0%
!!! AATCTAAAATATGGTAAAAA+TGG + Chr4:15782412-15782431 None:intergenic 15.0%
!!! CAACTTTTTGATAAATAAAT+TGG + Chr4:15786451-15786470 None:intergenic 15.0%
!!! CGATTATAATCAATTTTTAT+TGG - Chr4:15785086-15785105 MsG0480019192.01.T01:intron 15.0%
!!! CTCATTTAATTTATTTTATC+GGG + Chr4:15786366-15786385 None:intergenic 15.0%
!!! CTTTTAAAATACTAGTAAAT+AGG - Chr4:15783286-15783305 MsG0480019192.01.T01:intron 15.0%
!!! GGATTATATAATCTAAAATA+TGG + Chr4:15782421-15782440 None:intergenic 15.0%
!!! TATTTTATATTTTTGGTACA+AGG + Chr4:15786164-15786183 None:intergenic 15.0%
!!! TCAATAATAATTTTCAAAGA+CGG - Chr4:15781628-15781647 MsG0480019192.01.T01:CDS 15.0%
!!! TGCTTAAAAAAAAAATCTTT+TGG + Chr4:15785044-15785063 None:intergenic 15.0%
!!! TGGAAGTTTTTTTATTTTTT+GGG + Chr4:15785759-15785778 None:intergenic 15.0%
!!! TTGGAAGTTTTTTTATTTTT+TGG + Chr4:15785760-15785779 None:intergenic 15.0%
!!! TTGTTGATTTTGTTTTATTT+TGG - Chr4:15784602-15784621 MsG0480019192.01.T01:intron 15.0%
!! AAAATATATAACACTGGAAT+TGG + Chr4:15784067-15784086 None:intergenic 20.0%
!! AAATATATAACACTGGAATT+GGG + Chr4:15784066-15784085 None:intergenic 20.0%
!! AAATCAAAGTTTGTGTTTAT+AGG - Chr4:15782723-15782742 MsG0480019192.01.T01:intron 20.0%
!! AACATTAAGATGAATAAATG+GGG - Chr4:15785961-15785980 MsG0480019192.01.T01:intron 20.0%
!! AATAAAACAATTAAATGAGC+TGG + Chr4:15782027-15782046 None:intergenic 20.0%
!! ACTCAAATTATATGATGTTT+GGG + Chr4:15782071-15782090 None:intergenic 20.0%
!! AGGTTAATTTATCTGATTTA+TGG - Chr4:15784721-15784740 MsG0480019192.01.T01:intron 20.0%
!! ATTAGTAAACGATGAATAAT+AGG + Chr4:15784904-15784923 None:intergenic 20.0%
!! CAAGAAAAAATATATAACAC+TGG + Chr4:15784073-15784092 None:intergenic 20.0%
!! GATAAATGATAGTATAAACA+AGG + Chr4:15783160-15783179 None:intergenic 20.0%
!! GTGGAAAAAAAATTCAAATT+AGG + Chr4:15785704-15785723 None:intergenic 20.0%
!!! AAGTTAGGCTTTTATAATAA+AGG + Chr4:15783400-15783419 None:intergenic 20.0%
!!! AATTACTTTTATTGACTACT+AGG + Chr4:15786195-15786214 None:intergenic 20.0%
!!! ACTTATACAATTCATTGTTT+TGG + Chr4:15784943-15784962 None:intergenic 20.0%
!!! AGTAGCTGTTTTAATTTTTT+CGG - Chr4:15782108-15782127 MsG0480019192.01.T01:intron 20.0%
!!! ATGTTATAGAAATTTTGTCA+TGG - Chr4:15784556-15784575 MsG0480019192.01.T01:intron 20.0%
!!! ATTTGAGTAATTTGTGTTTT+TGG + Chr4:15782916-15782935 None:intergenic 20.0%
!!! CAGTGTTATATATTTTTTCT+TGG - Chr4:15784071-15784090 MsG0480019192.01.T01:intron 20.0%
!!! GCTCATTTAATTGTTTTATT+AGG - Chr4:15782027-15782046 MsG0480019192.01.T01:intron 20.0%
!!! GTATATCCATTGTTATTAAA+TGG - Chr4:15781913-15781932 MsG0480019192.01.T01:intron 20.0%
!!! TGATTAAAGTGATACTTTTA+CGG - Chr4:15786299-15786318 MsG0480019192.01.T01:intron 20.0%
!!! TGTTATAGAAATTTTGTCAT+GGG - Chr4:15784557-15784576 MsG0480019192.01.T01:intron 20.0%
!!! TTCTGACTTTTTAAAGAATT+CGG + Chr4:15782442-15782461 None:intergenic 20.0%
!!! TTTGAATAATATTTTAGACG+AGG + Chr4:15783029-15783048 None:intergenic 20.0%
!!! TTTTTCCATTTTACTTTGTT+CGG - Chr4:15782371-15782390 MsG0480019192.01.T01:intron 20.0%
! AAAACATAGTATACAACAGT+AGG + Chr4:15781854-15781873 None:intergenic 25.0%
! AAAGTACAATCAGAGATTAA+TGG + Chr4:15781697-15781716 None:intergenic 25.0%
! AATTGAGCCTTAGTTTATAT+AGG + Chr4:15786649-15786668 None:intergenic 25.0%
! AGTAAGGAGAACAAAATTAA+TGG - Chr4:15785844-15785863 MsG0480019192.01.T01:intron 25.0%
! AGTTGAGATTAGCATTAATT+AGG + Chr4:15783473-15783492 None:intergenic 25.0%
! ATAATCATTTCTTGAAAGCA+TGG + Chr4:15782003-15782022 None:intergenic 25.0%
! ATAATCCGAACAAAGTAAAA+TGG + Chr4:15782379-15782398 None:intergenic 25.0%
! ATTAGCATTAATTAGGGATT+AGG + Chr4:15783466-15783485 None:intergenic 25.0%
! CAAGGAAAATATTTCATACA+CGG + Chr4:15786502-15786521 None:intergenic 25.0%
! CTTGAACCATTTAATAACAA+TGG + Chr4:15781922-15781941 None:intergenic 25.0%
! GACTCAAATTATATGATGTT+TGG + Chr4:15782072-15782091 None:intergenic 25.0%
! GATTCTTAATGAAAACGATT+TGG + Chr4:15781729-15781748 None:intergenic 25.0%
! GCAACATTTAATGTATGTTA+TGG + Chr4:15784273-15784292 None:intergenic 25.0%
! GTTGAGATTAGCATTAATTA+GGG + Chr4:15783472-15783491 None:intergenic 25.0%
! TAAATGCAAATTCTAAGCAT+GGG + Chr4:15781341-15781360 None:intergenic 25.0%
! TAATCAATTTAGACAGTCTT+CGG - Chr4:15784345-15784364 MsG0480019192.01.T01:intron 25.0%
! TATGCTAGATAACATAGTAA+AGG + Chr4:15781877-15781896 None:intergenic 25.0%
! TCAAATTATATAACTGCACT+TGG + Chr4:15782654-15782673 None:intergenic 25.0%
! TTAAATGCAAATTCTAAGCA+TGG + Chr4:15781342-15781361 None:intergenic 25.0%
! TTAGCATTAATTAGGGATTA+GGG + Chr4:15783465-15783484 None:intergenic 25.0%
! TTGAGTCTTAATGTGTTTAA+TGG - Chr4:15782085-15782104 MsG0480019192.01.T01:intron 25.0%
!! AGAGATTATTGTTATTGACT+TGG + Chr4:15785779-15785798 None:intergenic 25.0%
!! ATCATTAACACTTTTCTTTG+TGG + Chr4:15785723-15785742 None:intergenic 25.0%
!! CTCTAAAAAAAAATACGGTT+CGG - Chr4:15782545-15782564 MsG0480019192.01.T01:intron 25.0%
!! TATAGGTTAACACATTTTCT+TGG - Chr4:15782740-15782759 MsG0480019192.01.T01:intron 25.0%
!! TTTTAAGCACCAAAAAGAAA+TGG - Chr4:15785055-15785074 MsG0480019192.01.T01:intron 25.0%
!!! AGAAAAGTGTTAATGATTTC+CGG - Chr4:15785726-15785745 MsG0480019192.01.T01:intron 25.0%
!!! ATTTTTTTGTTCAGTTAGCT+TGG - Chr4:15784382-15784401 MsG0480019192.01.T01:intron 25.0%
!!! GTATTCGTTTTAACATCATT+GGG + Chr4:15787202-15787221 None:intergenic 25.0%
!!! GTTGATTGTATTTGTTGTAT+TGG + Chr4:15783605-15783624 None:intergenic 25.0%
!!! TACAAACAAAAAAGCACTAT+TGG + Chr4:15784412-15784431 None:intergenic 25.0%
!!! TGATTTTGTTTTATTTTGGC+AGG - Chr4:15784606-15784625 MsG0480019192.01.T01:intron 25.0%
!!! TGCTTTTTTGTTTGTAATTG+AGG - Chr4:15784416-15784435 MsG0480019192.01.T01:intron 25.0%
!!! TGTATTCGTTTTAACATCAT+TGG + Chr4:15787203-15787222 None:intergenic 25.0%
!!! TTGTGTTTTTGGTTTTTGTT+TGG + Chr4:15782905-15782924 None:intergenic 25.0%
!!! TTTCGGTGTTATTAACAATT+AGG - Chr4:15782125-15782144 MsG0480019192.01.T01:intron 25.0%
!!! TTTTTTTGTTCAGTTAGCTT+GGG - Chr4:15784383-15784402 MsG0480019192.01.T01:intron 25.0%
AAAATCGAAACCAAATTGAG+AGG - Chr4:15784188-15784207 MsG0480019192.01.T01:intron 30.0%
AAGTATAAAATATCGGCACA+TGG + Chr4:15782152-15782171 None:intergenic 30.0%
ACAAAAGACAACTTTGTAGT+TGG + Chr4:15787239-15787258 None:intergenic 30.0%
ACAATAGCAACAAAATGAGA+TGG + Chr4:15785485-15785504 None:intergenic 30.0%
AGGAAAATTTAGCAGTTCAA+GGG - Chr4:15781388-15781407 MsG0480019192.01.T01:CDS 30.0%
AGGCAATCACTTAAAAATGT+TGG - Chr4:15785258-15785277 MsG0480019192.01.T01:intron 30.0%
ATGGCAAATGAAACAGATAT+TGG + Chr4:15785219-15785238 None:intergenic 30.0%
ATTAAATGTTGCAGTAGCTT+GGG - Chr4:15784281-15784300 MsG0480019192.01.T01:intron 30.0%
ATTTCAGTTGTCACATGATA+TGG - Chr4:15784662-15784681 MsG0480019192.01.T01:intron 30.0%
CACTTTCAATAAGCAATTTG+AGG - Chr4:15783997-15784016 MsG0480019192.01.T01:intron 30.0%
CTCAAATTGCTTATTGAAAG+TGG + Chr4:15783999-15784018 None:intergenic 30.0%
CTGATGTTGAAATATAGACA+TGG - Chr4:15786537-15786556 MsG0480019192.01.T01:intron 30.0%
GTAATGAAAATCAGCATGTA+TGG - Chr4:15784019-15784038 MsG0480019192.01.T01:intron 30.0%
TATTAGGACTACTATTTGCA+TGG - Chr4:15782043-15782062 MsG0480019192.01.T01:intron 30.0%
TCAAGAGTCATTTCAAAACA+AGG - Chr4:15785333-15785352 MsG0480019192.01.T01:intron 30.0%
TGATATTGAGACCTTCATAT+CGG + Chr4:15783882-15783901 None:intergenic 30.0%
TTATTCAAACTCAGCTATGT+TGG - Chr4:15783040-15783059 MsG0480019192.01.T01:intron 30.0%
TTCGTGATAAACAACATTTG+AGG + Chr4:15785406-15785425 None:intergenic 30.0%
TTTGACATTGTAAACCAATG+CGG - Chr4:15786803-15786822 MsG0480019192.01.T01:intron 30.0%
! AAGAAAAGTGTACTGGTATA+AGG + Chr4:15783579-15783598 None:intergenic 30.0%
! AATGTTTTGTGAGTAGAAAG+TGG + Chr4:15786673-15786692 None:intergenic 30.0%
! AATTTCATTTTACGCAAGGA+CGG - Chr4:15784113-15784132 MsG0480019192.01.T01:intron 30.0%
! ATGTTTTGTGAGTAGAAAGT+GGG + Chr4:15786672-15786691 None:intergenic 30.0%
! ATTTCCAGTTTTTCTAAGCA+AGG + Chr4:15782481-15782500 None:intergenic 30.0%
! ATTTTTATATGAGCTGTCTG+CGG + Chr4:15785907-15785926 None:intergenic 30.0%
! CAACAATTTCATTTTACGCA+AGG - Chr4:15784109-15784128 MsG0480019192.01.T01:intron 30.0%
! CACTCAAATTTTTCATACTC+AGG - Chr4:15785140-15785159 MsG0480019192.01.T01:intron 30.0%
! CTCAAAATCTTGTTTCAACA+CGG - Chr4:15782512-15782531 MsG0480019192.01.T01:intron 30.0%
! GCTACAAAACCATTTCTTTT+TGG + Chr4:15785067-15785086 None:intergenic 30.0%
! GTGATTCTTTTTCTTTGGTT+GGG - Chr4:15782250-15782269 MsG0480019192.01.T01:intron 30.0%
! GTGTTGAAACAAGATTTTGA+GGG + Chr4:15782513-15782532 None:intergenic 30.0%
! GTTGATTTATCTGTGATTGA+TGG - Chr4:15787082-15787101 MsG0480019192.01.T01:CDS 30.0%
! TAGCCTTCTTTTGTATTTAG+AGG - Chr4:15784315-15784334 MsG0480019192.01.T01:intron 30.0%
! TAGCTGTGATTCTTTTTCTT+TGG - Chr4:15782245-15782264 MsG0480019192.01.T01:intron 30.0%
! TATAATGATTGGTGGTCAAA+AGG + Chr4:15783077-15783096 None:intergenic 30.0%
! TGCAACAAAGTATTAAACTG+CGG - Chr4:15787145-15787164 MsG0480019192.01.T01:CDS 30.0%
! TGTGATTCTTTTTCTTTGGT+TGG - Chr4:15782249-15782268 MsG0480019192.01.T01:intron 30.0%
! TTGGAAAAAGAAAAGTGTAC+TGG + Chr4:15783586-15783605 None:intergenic 30.0%
! TTTCCAGTTTTTCTAAGCAA+GGG + Chr4:15782480-15782499 None:intergenic 30.0%
! TTTGCATTTAAGACTCTTAC+AGG - Chr4:15781351-15781370 MsG0480019192.01.T01:CDS 30.0%
!! AATATTTTAGACGAGGTTTG+AGG + Chr4:15783022-15783041 None:intergenic 30.0%
!! AGAATCTGATTGGTTTATCT+AGG + Chr4:15783545-15783564 None:intergenic 30.0%
!! AGATTGCTATTGACTTTGAA+GGG + Chr4:15783937-15783956 None:intergenic 30.0%
!! GAAAAGTGTTAATGATTTCC+GGG - Chr4:15785727-15785746 MsG0480019192.01.T01:intron 30.0%
!! TTAAGAATCCTTTTGTTTCC+TGG - Chr4:15781740-15781759 MsG0480019192.01.T01:CDS 30.0%
!! TTTTTCAAAGTACAGATCCA+AGG + Chr4:15784172-15784191 None:intergenic 30.0%
!!! TTGTTGTTTTGCAATGTGTT+AGG - Chr4:15781797-15781816 MsG0480019192.01.T01:intron 30.0%
AAAACTCATGTCCGATATGA+AGG - Chr4:15783868-15783887 MsG0480019192.01.T01:intron 35.0%
AAACTGGAAGATCCAAAATC+TGG + Chr4:15781468-15781487 None:intergenic 35.0%
AACAAGCTAGACCTTATCTT+CGG + Chr4:15781782-15781801 None:intergenic 35.0%
AACTTCATCAGGTCGAATTT+GGG - Chr4:15786913-15786932 MsG0480019192.01.T01:intron 35.0%
AATTGTCAAACTGGTGATTG+CGG - Chr4:15786974-15786993 MsG0480019192.01.T01:CDS 35.0%
ACAGTGAACTATAGAAGAAG+AGG + Chr4:15784974-15784993 None:intergenic 35.0%
ACCACCAATCATTATACCTA+GGG - Chr4:15783081-15783100 MsG0480019192.01.T01:intron 35.0%
ACTTAACGGTGGAAACAATT+TGG - Chr4:15787054-15787073 MsG0480019192.01.T01:CDS 35.0%
AGACATTTCCAACACACTTA+TGG + Chr4:15785114-15785133 None:intergenic 35.0%
AGATGACAGAGTTGCAAAAA+CGG + Chr4:15783647-15783666 None:intergenic 35.0%
AGGAAAGTCAGTTGAATTAG+AGG + Chr4:15783960-15783979 None:intergenic 35.0%
AGGGAAAAACAGAAGTGATT+AGG + Chr4:15783442-15783461 None:intergenic 35.0%
CAACTTAGTTCAACCTCTAA+TGG - Chr4:15787121-15787140 MsG0480019192.01.T01:CDS 35.0%
CAATTGTAGAGTAGGAAAAG+AGG + Chr4:15785671-15785690 None:intergenic 35.0%
CAGGTTGTAATTCATGGTTT+GGG - Chr4:15784625-15784644 MsG0480019192.01.T01:intron 35.0%
CATTAAATGTTGCAGTAGCT+TGG - Chr4:15784280-15784299 MsG0480019192.01.T01:intron 35.0%
CATTAATTAGGGATTAGGGA+GGG + Chr4:15783461-15783480 None:intergenic 35.0%
CTCAAATACCAGGAAACAAA+AGG + Chr4:15781751-15781770 None:intergenic 35.0%
CTTACCGAATTCACACTTAA+CGG - Chr4:15787040-15787059 MsG0480019192.01.T01:CDS 35.0%
GAAAATTTAGCAGTTCAAGG+GGG - Chr4:15781390-15781409 MsG0480019192.01.T01:CDS 35.0%
GAAATCACTCTGTGAAAAAC+TGG + Chr4:15781484-15781503 None:intergenic 35.0%
GAACTTCTACGATACAAGTT+TGG - Chr4:15782672-15782691 MsG0480019192.01.T01:intron 35.0%
GACACATTCAATTGTAGAGT+AGG + Chr4:15785679-15785698 None:intergenic 35.0%
GACATTTCCAACACACTTAT+GGG + Chr4:15785113-15785132 None:intergenic 35.0%
GAGAATACATTCCGAAGATA+AGG - Chr4:15781768-15781787 MsG0480019192.01.T01:intron 35.0%
GAGGAAAATTTAGCAGTTCA+AGG - Chr4:15781387-15781406 MsG0480019192.01.T01:CDS 35.0%
GCACCTCTAAATACAAAAGA+AGG + Chr4:15784321-15784340 None:intergenic 35.0%
GGAAAATTTAGCAGTTCAAG+GGG - Chr4:15781389-15781408 MsG0480019192.01.T01:CDS 35.0%
GGAATGTATTCTCAAATACC+AGG + Chr4:15781761-15781780 None:intergenic 35.0%
GGAGGTAAAATTGTGTTCAT+TGG + Chr4:15783707-15783726 None:intergenic 35.0%
GGGAAAAACAGAAGTGATTA+GGG + Chr4:15783441-15783460 None:intergenic 35.0%
GGTTTATCTAGGTACATGAA+AGG + Chr4:15783534-15783553 None:intergenic 35.0%
TACTTTGTTGCATCCATTAG+AGG + Chr4:15787137-15787156 None:intergenic 35.0%
TATAGTCAAGCTCTGCAATT+TGG - Chr4:15786568-15786587 MsG0480019192.01.T01:intron 35.0%
TCTTAAACTTGGTATGTTGG+TGG + Chr4:15782631-15782650 None:intergenic 35.0%
TGAAAGTGGTACTCACAAAA+TGG + Chr4:15783985-15784004 None:intergenic 35.0%
TGACAATCAACAAGAGTCAA+AGG - Chr4:15785238-15785257 MsG0480019192.01.T01:intron 35.0%
TGACATTATGTACAGCAGTA+AGG - Chr4:15785828-15785847 MsG0480019192.01.T01:intron 35.0%
TGATTTATGGCTGAGAACAA+TGG - Chr4:15784734-15784753 MsG0480019192.01.T01:intron 35.0%
TGGTAGCAGACATAAGAAAA+AGG + Chr4:15785465-15785484 None:intergenic 35.0%
TGTTTATCTCCAAAGACAGA+GGG + Chr4:15782994-15783013 None:intergenic 35.0%
TTAGGTAAGCAAAATGCTTG+AGG - Chr4:15781815-15781834 MsG0480019192.01.T01:intron 35.0%
TTCTCATTTCACTTTGACAC+AGG - Chr4:15781501-15781520 MsG0480019192.01.T01:CDS 35.0%
TTGATATTGAGACCTTCATG+CGG + Chr4:15783912-15783931 None:intergenic 35.0%
TTGTTTATCTCCAAAGACAG+AGG + Chr4:15782995-15783014 None:intergenic 35.0%
! AACTGGGAATATTGTTGTTG+TGG + Chr4:15781609-15781628 None:intergenic 35.0%
! ACTGCTAAATTTTCCTCTAC+TGG + Chr4:15781384-15781403 None:intergenic 35.0%
! ATACCAATCGTTGATAGAGA+TGG - Chr4:15785363-15785382 MsG0480019192.01.T01:intron 35.0%
! ATCAATTTTCCACATACCTG+TGG - Chr4:15786623-15786642 MsG0480019192.01.T01:intron 35.0%
! CAACAAAGTATTAAACTGCG+GGG - Chr4:15787147-15787166 MsG0480019192.01.T01:CDS 35.0%
! CAGCTTTGATGACATAAACA+AGG + Chr4:15786520-15786539 None:intergenic 35.0%
! CGTGTTGAAACAAGATTTTG+AGG + Chr4:15782514-15782533 None:intergenic 35.0%
! GCAACAAAGTATTAAACTGC+GGG - Chr4:15787146-15787165 MsG0480019192.01.T01:CDS 35.0%
! TCGTTTAACTTCTTCTCGAT+AGG - Chr4:15785582-15785601 MsG0480019192.01.T01:intron 35.0%
! TGGTCTTAAACTTGGTATGT+TGG + Chr4:15782634-15782653 None:intergenic 35.0%
! TTGACTCTTGTTGATTGTCA+TGG + Chr4:15785238-15785257 None:intergenic 35.0%
! TTTTCTGCAACCTCTCAATT+TGG + Chr4:15784201-15784220 None:intergenic 35.0%
! TTTTGGCAGGTTGTAATTCA+TGG - Chr4:15784619-15784638 MsG0480019192.01.T01:intron 35.0%
! TTTTTATATGAGCTGTCTGC+GGG + Chr4:15785906-15785925 None:intergenic 35.0%
!! GAGATTGCTATTGACTTTGA+AGG + Chr4:15783938-15783957 None:intergenic 35.0%
!!! TTATTTTTTGGGTCAATGCC+CGG + Chr4:15785748-15785767 None:intergenic 35.0%
AAAAGCCTAACTTGATGTGC+TGG - Chr4:15783407-15783426 MsG0480019192.01.T01:intron 40.0%
AACAGACGAATTGAACAGGT+AGG + Chr4:15782203-15782222 None:intergenic 40.0%
AAGATAGTAGTATCCCCACA+TGG - Chr4:15781939-15781958 MsG0480019192.01.T01:intron 40.0%
AAGATGGCATGAAGCTATTG+AGG - Chr4:15784687-15784706 MsG0480019192.01.T01:intron 40.0%
ACTGGTATAAGGATGAAGGA+GGG + Chr4:15783568-15783587 None:intergenic 40.0%
ACTTCATCAGGTCGAATTTG+GGG - Chr4:15786914-15786933 MsG0480019192.01.T01:intron 40.0%
AGAAAAACTGGAAATTGCCC+TGG - Chr4:15782486-15782505 MsG0480019192.01.T01:intron 40.0%
AGACAATAGACCTAAGCTTC+AGG - Chr4:15781977-15781996 MsG0480019192.01.T01:intron 40.0%
AGTTAAAAGACGACTCACCT+TGG - Chr4:15784152-15784171 MsG0480019192.01.T01:intron 40.0%
ATGAAAGGTCATCCGATCAA+AGG + Chr4:15783519-15783538 None:intergenic 40.0%
CAATCATTATACCTAGGGCA+TGG - Chr4:15783086-15783105 MsG0480019192.01.T01:intron 40.0%
CATGCCCTAGGTATAATGAT+TGG + Chr4:15783088-15783107 None:intergenic 40.0%
CCAAACTAGCATCTTCATGT+TGG - Chr4:15784784-15784803 MsG0480019192.01.T01:intron 40.0%
CCAACATGAAGATGCTAGTT+TGG + Chr4:15784787-15784806 None:intergenic 40.0%
CCTAAATCTCAGCCTTTGAT+CGG - Chr4:15783504-15783523 MsG0480019192.01.T01:intron 40.0%
CCTGTGGCCTATATAAACTA+AGG - Chr4:15786639-15786658 MsG0480019192.01.T01:intron 40.0%
CCTTAGTTTATATAGGCCAC+AGG + Chr4:15786642-15786661 None:intergenic 40.0%
CGATCAAAGGCTGAGATTTA+GGG + Chr4:15783506-15783525 None:intergenic 40.0%
CGGTAAAAGTGGAAAAGACA+CGG + Chr4:15783728-15783747 None:intergenic 40.0%
CTCGGATTATATGCTCCAAA+AGG - Chr4:15782598-15782617 MsG0480019192.01.T01:intron 40.0%
CTGCTGTACATAATGTCAAG+CGG + Chr4:15785826-15785845 None:intergenic 40.0%
GAAACAAGCTACTATCAGCT+CGG - Chr4:15782580-15782599 MsG0480019192.01.T01:intron 40.0%
GAACCTGTTAACTGTCATGA+TGG - Chr4:15781420-15781439 MsG0480019192.01.T01:CDS 40.0%
GAACTTCATCAGGTCGAATT+TGG - Chr4:15786912-15786931 MsG0480019192.01.T01:intron 40.0%
GAAGCTAGTAGGATGAGAAA+AGG + Chr4:15782335-15782354 None:intergenic 40.0%
GACCACCAATCATTATACCT+AGG - Chr4:15783080-15783099 MsG0480019192.01.T01:intron 40.0%
GAGGTTGAACTAAGTTGCAT+TGG + Chr4:15787118-15787137 None:intergenic 40.0%
GATGACAGAGTTGCAAAAAC+GGG + Chr4:15783646-15783665 None:intergenic 40.0%
GCAGGTTGTAATTCATGGTT+TGG - Chr4:15784624-15784643 MsG0480019192.01.T01:intron 40.0%
GCATTAATTAGGGATTAGGG+AGG + Chr4:15783462-15783481 None:intergenic 40.0%
GGAAGACATGCATAATCTGA+TGG - Chr4:15784805-15784824 MsG0480019192.01.T01:intron 40.0%
GGCAATGGTAATTGTCAAAC+TGG - Chr4:15786965-15786984 MsG0480019192.01.T01:CDS 40.0%
GTCACATGATATGGCAAAGA+TGG - Chr4:15784671-15784690 MsG0480019192.01.T01:intron 40.0%
GTGGTACTCACAAAATGGAA+AGG + Chr4:15783980-15783999 None:intergenic 40.0%
GTTAAAACGAATACATGCCC+AGG - Chr4:15787208-15787227 MsG0480019192.01.T01:CDS 40.0%
GTTTATCTCCAAAGACAGAG+GGG + Chr4:15782993-15783012 None:intergenic 40.0%
TAAAAGTGGAAAAGACACGG+AGG + Chr4:15783725-15783744 None:intergenic 40.0%
TACTGGTATAAGGATGAAGG+AGG + Chr4:15783569-15783588 None:intergenic 40.0%
TATCAAAACGATCCGCATGA+AGG - Chr4:15783897-15783916 MsG0480019192.01.T01:intron 40.0%
TATTGGACCCATAAGTGTGT+TGG - Chr4:15785103-15785122 MsG0480019192.01.T01:intron 40.0%
TCATTTCACTTTGACACAGG+AGG - Chr4:15781504-15781523 MsG0480019192.01.T01:CDS 40.0%
TCCACCGTTAAGTGTGAATT+CGG + Chr4:15787047-15787066 None:intergenic 40.0%
TCTCCATCTCTATCAACGAT+TGG + Chr4:15785369-15785388 None:intergenic 40.0%
TGCTAACAGACGAATTGAAC+AGG + Chr4:15782207-15782226 None:intergenic 40.0%
TGGTGTATTGGAATGAAGGT+AGG + Chr4:15783673-15783692 None:intergenic 40.0%
TTATATAGGCCACAGGTATG+TGG + Chr4:15786635-15786654 None:intergenic 40.0%
TTGAACAAGACCTCACAGTT+AGG + Chr4:15783124-15783143 None:intergenic 40.0%
TTGCCCTTGCTTAGAAAAAC+TGG - Chr4:15782474-15782493 MsG0480019192.01.T01:intron 40.0%
TTGTGTTCATTGGCAGAGAA+AGG + Chr4:15783697-15783716 None:intergenic 40.0%
TTTATCTCCAAAGACAGAGG+GGG + Chr4:15782992-15783011 None:intergenic 40.0%
! AAGCGGACTTAAACTGCATA+TGG + Chr4:15785809-15785828 None:intergenic 40.0%
! AGACAGTCTTCGGTACTTTT+TGG - Chr4:15784355-15784374 MsG0480019192.01.T01:intron 40.0%
! CTGTTAACTGTCATGATGGA+GGG - Chr4:15781424-15781443 MsG0480019192.01.T01:CDS 40.0%
! GTGTACTGGTATAAGGATGA+AGG + Chr4:15783572-15783591 None:intergenic 40.0%
! GTTGCTATTGTTGTCGTAGA+AGG - Chr4:15785494-15785513 MsG0480019192.01.T01:intron 40.0%
! TGTTAACTGTCATGATGGAG+GGG - Chr4:15781425-15781444 MsG0480019192.01.T01:CDS 40.0%
! TTGTTGTTGTGGATCAACTC+CGG + Chr4:15781598-15781617 None:intergenic 40.0%
! TTTTAGACGAGGTTTGAGGA+AGG + Chr4:15783018-15783037 None:intergenic 40.0%
! TTTTATATGAGCTGTCTGCG+GGG + Chr4:15785905-15785924 None:intergenic 40.0%
!! AAACAAGATTTTGAGGGACC+AGG + Chr4:15782507-15782526 None:intergenic 40.0%
!! AACAAGATTTTGAGGGACCA+GGG + Chr4:15782506-15782525 None:intergenic 40.0%
!! ACTGCACTTGGTCTTAAACT+TGG + Chr4:15782642-15782661 None:intergenic 40.0%
!! AGGTTGGTGTATTGGAATGA+AGG + Chr4:15783677-15783696 None:intergenic 40.0%
!! GACAGTCTTCGGTACTTTTT+GGG - Chr4:15784356-15784375 MsG0480019192.01.T01:intron 40.0%
!! GATGAATAAATGGGGTGTTG+AGG - Chr4:15785969-15785988 MsG0480019192.01.T01:intron 40.0%
!! TGGGTTGATGATAAGCATCA+GGG + Chr4:15787183-15787202 None:intergenic 40.0%
!! TTGGGTTGATGATAAGCATC+AGG + Chr4:15787184-15787203 None:intergenic 40.0%
!!! GTTGGTGGTTTAACACCTTT+TGG + Chr4:15782616-15782635 None:intergenic 40.0%
AAAACGAATACATGCCCAGG+TGG - Chr4:15787211-15787230 MsG0480019192.01.T01:CDS 45.0%
ACCGAATTCACACTTAACGG+TGG - Chr4:15787043-15787062 MsG0480019192.01.T01:CDS 45.0%
AGATTAATGGCAGCTATCCC+GGG + Chr4:15781684-15781703 None:intergenic 45.0%
AGTTGCAAAAACGGGTGTCT+TGG + Chr4:15783638-15783657 None:intergenic 45.0%
AGTTGGACCAAGGTCAAACA+TGG - Chr4:15786870-15786889 MsG0480019192.01.T01:intron 45.0%
ATAGTAGTATCCCCACATGG+AGG - Chr4:15781942-15781961 MsG0480019192.01.T01:intron 45.0%
ATCATAGCATCACCTCCATG+TGG + Chr4:15781957-15781976 None:intergenic 45.0%
ATGGCATGAAGCTATTGAGG+TGG - Chr4:15784690-15784709 MsG0480019192.01.T01:intron 45.0%
CATGACAGTTAACAGGTTCC+TGG + Chr4:15781419-15781438 None:intergenic 45.0%
CCGATCAAAGGCTGAGATTT+AGG + Chr4:15783507-15783526 None:intergenic 45.0%
CCTCCATCATGACAGTTAAC+AGG + Chr4:15781426-15781445 None:intergenic 45.0%
CCTGTTAACTGTCATGATGG+AGG - Chr4:15781423-15781442 MsG0480019192.01.T01:CDS 45.0%
CGGACTTAAACTGCATATGG+TGG + Chr4:15785806-15785825 None:intergenic 45.0%
CGGGTGTCTTGGAAATCTAA+AGG + Chr4:15783627-15783646 None:intergenic 45.0%
CTATTGAGGTGGATGAAAGC+AGG - Chr4:15784701-15784720 MsG0480019192.01.T01:intron 45.0%
GAGATTAATGGCAGCTATCC+CGG + Chr4:15781685-15781704 None:intergenic 45.0%
GCCCTAGGTATAATGATTGG+TGG + Chr4:15783085-15783104 None:intergenic 45.0%
GTGAATTCGGTAAGAGTGAG+CGG + Chr4:15787034-15787053 None:intergenic 45.0%
GTTCATTGGCAGAGAAAGGT+TGG + Chr4:15783693-15783712 None:intergenic 45.0%
TACAGGTGTGATTCCAGTAG+AGG - Chr4:15781368-15781387 MsG0480019192.01.T01:CDS 45.0%
TATGTGATGTGTCAGCGTGA+TGG - Chr4:15784761-15784780 MsG0480019192.01.T01:intron 45.0%
TCATAGCATCACCTCCATGT+GGG + Chr4:15781956-15781975 None:intergenic 45.0%
TCTCTGCTTGATATCTGCTC+AGG - Chr4:15786772-15786791 MsG0480019192.01.T01:intron 45.0%
TGAAGGAGGGAGAATCTGAT+TGG + Chr4:15783555-15783574 None:intergenic 45.0%
TGTTGTTGTGGATCAACTCC+GGG + Chr4:15781597-15781616 None:intergenic 45.0%
TTGATGAAGGGAGTGATGAG+AGG + Chr4:15783761-15783780 None:intergenic 45.0%
TTTATATGAGCTGTCTGCGG+GGG + Chr4:15785904-15785923 None:intergenic 45.0%
TTTCTTTGGTTGGGCTGAAG+TGG - Chr4:15782259-15782278 MsG0480019192.01.T01:intron 45.0%
TTTGTTGCTGAAGCTGAACC+CGG - Chr4:15781663-15781682 MsG0480019192.01.T01:CDS 45.0%
! AAAGGCTGAGATTTAGGGTG+TGG + Chr4:15783501-15783520 None:intergenic 45.0%
! ACTTTGTAGTTGGTACCACC+TGG + Chr4:15787229-15787248 None:intergenic 45.0%
! CTTTGTAGTTGGTACCACCT+GGG + Chr4:15787228-15787247 None:intergenic 45.0%
! GTATCAGCGTTGCCAGATTT+TGG - Chr4:15781453-15781472 MsG0480019192.01.T01:CDS 45.0%
!! GCAGAGAAAGGTTGGTGTAT+TGG + Chr4:15783685-15783704 None:intergenic 45.0%
AAAGACAGAGGGGGTTGGAA+GGG + Chr4:15782983-15783002 None:intergenic 50.0%
AACCTTGCAGGCTCAGAGAT+GGG + Chr4:15781572-15781591 None:intergenic 50.0%
AAGGGAGTGATGAGAGGAGA+TGG + Chr4:15783755-15783774 None:intergenic 50.0%
ACAGATGCGACCTAACTGTG+AGG - Chr4:15783111-15783130 MsG0480019192.01.T01:intron 50.0%
AGTATAGTCGACGATGGCGA+GGG + Chr4:15783804-15783823 None:intergenic 50.0%
ATCCCAGCTGGAACTTCATC+AGG - Chr4:15786902-15786921 MsG0480019192.01.T01:intron 50.0%
CACTGCCAGCACATCAAGTT+AGG + Chr4:15783415-15783434 None:intergenic 50.0%
CATAGCATCACCTCCATGTG+GGG + Chr4:15781955-15781974 None:intergenic 50.0%
CCAAGGTCAAACATGGACTC+TGG - Chr4:15786877-15786896 MsG0480019192.01.T01:intron 50.0%
CCAGAGTCCATGTTTGACCT+TGG + Chr4:15786880-15786899 None:intergenic 50.0%
GACCTGATGAAGTTCCAGCT+GGG + Chr4:15786907-15786926 None:intergenic 50.0%
GAGATGGACGACGGTAAAAG+TGG + Chr4:15783739-15783758 None:intergenic 50.0%
GATGAAGCCTTCGTCGCAAA+CGG + Chr4:15783831-15783850 None:intergenic 50.0%
GGGTTCAGCTTCAGCAACAA+AGG + Chr4:15781664-15781683 None:intergenic 50.0%
GTCCTCAGTTGCAGCTTATC+CGG - Chr4:15787001-15787020 MsG0480019192.01.T01:CDS 50.0%
GTTTGCGACGAAGGCTTCAT+CGG - Chr4:15783830-15783849 MsG0480019192.01.T01:intron 50.0%
TACCGGATAAGCTGCAACTG+AGG + Chr4:15787006-15787025 None:intergenic 50.0%
TGATATCTGCTCAGGCAGCT+AGG - Chr4:15786780-15786799 MsG0480019192.01.T01:intron 50.0%
TGATGAGAGGAGATGGACGA+CGG + Chr4:15783748-15783767 None:intergenic 50.0%
TGTCAAACTGGTGATTGCGG+TGG - Chr4:15786977-15786996 MsG0480019192.01.T01:CDS 50.0%
TTGTTGCTGAAGCTGAACCC+GGG - Chr4:15781664-15781683 MsG0480019192.01.T01:CDS 50.0%
! AACTGTCATGATGGAGGGGA+TGG - Chr4:15781429-15781448 MsG0480019192.01.T01:CDS 50.0%
! AAGAGTGAGCGGACTCTTAC+CGG + Chr4:15787023-15787042 None:intergenic 50.0%
! CGGACATGAGTTTTTCGCAG+AGG + Chr4:15783862-15783881 None:intergenic 50.0%
! GAAAGCATGGCCTGAAGCTT+AGG + Chr4:15781990-15782009 None:intergenic 50.0%
! GCTGAGATTTAGGGTGTGGT+TGG + Chr4:15783497-15783516 None:intergenic 50.0%
!! GAACCAAGGGCGTTGATGAA+GGG + Chr4:15783773-15783792 None:intergenic 50.0%
AAGACAGAGGGGGTTGGAAG+GGG + Chr4:15782982-15783001 None:intergenic 55.0%
ACCATTGCCTGAACCGTCGA+AGG + Chr4:15786954-15786973 None:intergenic 55.0%
ACCTTCGACGGTTCAGGCAA+TGG - Chr4:15786950-15786969 MsG0480019192.01.T01:CDS 55.0%
ACTCCCTTCATCAACGCCCT+TGG - Chr4:15783767-15783786 MsG0480019192.01.T01:intron 55.0%
CAAAGACAGAGGGGGTTGGA+AGG + Chr4:15782984-15783003 None:intergenic 55.0%
CAACCTTGCAGGCTCAGAGA+TGG + Chr4:15781573-15781592 None:intergenic 55.0%
CAGTATAGTCGACGATGGCG+AGG + Chr4:15783805-15783824 None:intergenic 55.0%
CGAACTGGTTGCACCTTCGA+CGG - Chr4:15786938-15786957 MsG0480019192.01.T01:CDS 55.0%
CGACCTGATGAAGTTCCAGC+TGG + Chr4:15786908-15786927 None:intergenic 55.0%
CGCATCTGTTACCATGCCCT+AGG + Chr4:15783100-15783119 None:intergenic 55.0%
CGTGCGCATGAGAAGCTAGT+AGG + Chr4:15782346-15782365 None:intergenic 55.0%
CTTCCAACCCCCTCTGTCTT+TGG - Chr4:15782982-15783001 MsG0480019192.01.T01:intron 55.0%
GAGGGTGGTATGGGAACCAA+GGG + Chr4:15783786-15783805 None:intergenic 55.0%
GGTGGCAGTATAGTCGACGA+TGG + Chr4:15783810-15783829 None:intergenic 55.0%
TCGAGTCCAGTGTTCTCGCA+TGG - Chr4:15785291-15785310 MsG0480019192.01.T01:intron 55.0%
TCTCCAAAGACAGAGGGGGT+TGG + Chr4:15782988-15783007 None:intergenic 55.0%
TCTTCTCGATAGGACCCGTG+CGG - Chr4:15785592-15785611 MsG0480019192.01.T01:intron 55.0%
TGCAGGCTCAGAGATGGGAA+TGG + Chr4:15781567-15781586 None:intergenic 55.0%
TTCCCATCTCTGAGCCTGCA+AGG - Chr4:15781567-15781586 MsG0480019192.01.T01:CDS 55.0%
! CGTCGAAGGTGCAACCAGTT+CGG + Chr4:15786940-15786959 None:intergenic 55.0%
! CTCATTGATGACTGCTGCCC+TGG + Chr4:15781540-15781559 None:intergenic 55.0%
!! GGAACCAAGGGCGTTGATGA+AGG + Chr4:15783774-15783793 None:intergenic 55.0%
AACTGCCGACCTCCACCACT+GGG + Chr4:15786854-15786873 None:intergenic 60.0%
ACAGGAGGCAAGTCCATGCC+AGG - Chr4:15781519-15781538 MsG0480019192.01.T01:CDS 60.0%
ACCAATGCGGCTACACCGTG+TGG - Chr4:15786816-15786835 MsG0480019192.01.T01:intron 60.0%
ACTGCCACCGTTTGCGACGA+AGG - Chr4:15783821-15783840 MsG0480019192.01.T01:intron 60.0%
ACTTGACCCGTGCTACCGCA+CGG + Chr4:15785610-15785629 None:intergenic 60.0%
ATAGGACCCGTGCGGTAGCA+CGG - Chr4:15785600-15785619 MsG0480019192.01.T01:intron 60.0%
ATAGTCGACGATGGCGAGGG+TGG + Chr4:15783801-15783820 None:intergenic 60.0%
CAACTCCGGGACAACCTTGC+AGG + Chr4:15781584-15781603 None:intergenic 60.0%
CAGGAGGCAAGTCCATGCCA+GGG - Chr4:15781520-15781539 MsG0480019192.01.T01:CDS 60.0%
CGAGGGTGGTATGGGAACCA+AGG + Chr4:15783787-15783806 None:intergenic 60.0%
CTGAGCCTGCAAGGTTGTCC+CGG - Chr4:15781576-15781595 MsG0480019192.01.T01:CDS 60.0%
GAAGCCTTCGTCGCAAACGG+TGG + Chr4:15783828-15783847 None:intergenic 60.0%
GACGATGGCGAGGGTGGTAT+GGG + Chr4:15783795-15783814 None:intergenic 60.0%
GGTTGCACCTTCGACGGTTC+AGG - Chr4:15786944-15786963 MsG0480019192.01.T01:CDS 60.0%
TGATGACTGCTGCCCTGGCA+TGG + Chr4:15781535-15781554 None:intergenic 60.0%
TGGACTCTGGACATCCCAGC+TGG - Chr4:15786890-15786909 MsG0480019192.01.T01:intron 60.0%
! GGTCGAATTTGGGGCCGAAC+TGG - Chr4:15786923-15786942 MsG0480019192.01.T01:intron 60.0%
!! AGCAGTTCAAGGGGGTGTCC+AGG - Chr4:15781398-15781417 MsG0480019192.01.T01:CDS 60.0%
ACAGAGGGGGTTGGAAGGGG+TGG + Chr4:15782979-15782998 None:intergenic 65.0%
ACCTCCACCACTGGGTGTGG+CGG + Chr4:15786846-15786865 None:intergenic 65.0%
CAACTGCCGACCTCCACCAC+TGG + Chr4:15786855-15786874 None:intergenic 65.0%
CAGAGGGGGTTGGAAGGGGT+GGG + Chr4:15782978-15782997 None:intergenic 65.0%
CGACGATGGCGAGGGTGGTA+TGG + Chr4:15783796-15783815 None:intergenic 65.0%
CTTGACCCGTGCTACCGCAC+GGG + Chr4:15785609-15785628 None:intergenic 65.0%
GCCACACGGTGTAGCCGCAT+TGG + Chr4:15786820-15786839 None:intergenic 65.0%
GGAGGTCGGCAGTTGGACCA+AGG - Chr4:15786860-15786879 MsG0480019192.01.T01:intron 65.0%
TAGGACCCGTGCGGTAGCAC+GGG - Chr4:15785601-15785620 MsG0480019192.01.T01:intron 65.0%
! CAGTGGTGGAGGTCGGCAGT+TGG - Chr4:15786853-15786872 MsG0480019192.01.T01:intron 65.0%
! CCACACCCAGTGGTGGAGGT+CGG - Chr4:15786846-15786865 MsG0480019192.01.T01:intron 65.0%
CCGACCTCCACCACTGGGTG+TGG + Chr4:15786849-15786868 None:intergenic 70.0%
CCACCACTGGGTGTGGCGGC+TGG + Chr4:15786842-15786861 None:intergenic 75.0%
CCAGCCGCCACACCCAGTGG+TGG - Chr4:15786839-15786858 MsG0480019192.01.T01:intron 75.0%
GCCGCCACACCCAGTGGTGG+AGG - Chr4:15786842-15786861 MsG0480019192.01.T01:intron 75.0%
TGGCCAGCCGCCACACCCAG+TGG - Chr4:15786836-15786855 MsG0480019192.01.T01:intron 75.0%
! GGGTGTGGCGGCTGGCCACA+CGG + Chr4:15786834-15786853 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 15781315 15787264 15781315 ID=MsG0480019192.01;Name=MsG0480019192.01
Chr4 mRNA 15781315 15787264 15781315 ID=MsG0480019192.01.T01;Parent=MsG0480019192.01;Name=MsG0480019192.01.T01;_AED=0.49;_eAED=0.72;_QI=0|0|0|1|0|0.66|3|0|280
Chr4 exon 15786930 15787264 15786930 ID=MsG0480019192.01.T01:exon:5141;Parent=MsG0480019192.01.T01
Chr4 exon 15783225 15783261 15783225 ID=MsG0480019192.01.T01:exon:5140;Parent=MsG0480019192.01.T01
Chr4 exon 15781315 15781785 15781315 ID=MsG0480019192.01.T01:exon:5139;Parent=MsG0480019192.01.T01
Chr4 CDS 15786930 15787264 15786930 ID=MsG0480019192.01.T01:cds;Parent=MsG0480019192.01.T01
Chr4 CDS 15783225 15783261 15783225 ID=MsG0480019192.01.T01:cds;Parent=MsG0480019192.01.T01
Chr4 CDS 15781315 15781785 15781315 ID=MsG0480019192.01.T01:cds;Parent=MsG0480019192.01.T01
Gene Sequence

>MsG0480019192.01.T01

ATGTTTATGAATTCTTGGTCAGACCCATGCTTAGAATTTGCATTTAAGACTCTTACAGGTGTGATTCCAGTAGAGGAAAATTTAGCAGTTCAAGGGGGTGTCCAGGAACCTGTTAACTGTCATGATGGAGGGGATGGTGTATCAGCGTTGCCAGATTTTGGATCTTCCAGTTTTTCACAGAGTGATTTCTCATTTCACTTTGACACAGGAGGCAAGTCCATGCCAGGGCAGCAGTCATCAATGAGCTCTCCATTCCCATCTCTGAGCCTGCAAGGTTGTCCCGGAGTTGATCCACAACAACAATATTCCCAGTTCAATAATAATTTTCAAAGACGTTGTACGTTGCAATTTCAAGAGTCATTTCAAAACAAGGCAGCTAGGTTTGACATTGTAAACCAATGCGGCTACACCGTGTGGCCAGCCGCCACACCCAGTGGTGGAGGTCGGCAGTTGGACCAAGGTCAAACATGGACTCTGGACATCCCAGCTGGAACTTCATCAGGTCGAATTTGGGGCCGAACTGGTTGCACCTTCGACGGTTCAGGCAATGGTAATTGTCAAACTGGTGATTGCGGTGGTGTCCTCAGTTGCAGCTTATCCGGTAAGAGTCCGCTCACTCTTACCGAATTCACACTTAACGGTGGAAACAATTTGGACTACGTTGATTTATCTGTGATTGATGGTTTCAACATTCCAATGCAACTTAGTTCAACCTCTAATGGATGCAACAAAGTATTAAACTGCGGGGATTCTAATTGCCCTGATGCTTATCATCAACCCAATGATGTTAAAACGAATACATGCCCAGGTGGTACCAACTACAAAGTTGTCTTTTGTCCTTGA
Protein sequence

>MsG0480019192.01.T01

MFMNSWSDPCLEFAFKTLTGVIPVEENLAVQGGVQEPVNCHDGGDGVSALPDFGSSSFSQSDFSFHFDTGGKSMPGQQSSMSSPFPSLSLQGCPGVDPQQQYSQFNNNFQRRCTLQFQESFQNKAARFDIVNQCGYTVWPAATPSGGGRQLDQGQTWTLDIPAGTSSGRIWGRTGCTFDGSGNGNCQTGDCGGVLSCSLSGKSPLTLTEFTLNGGNNLDYVDLSVIDGFNIPMQLSSTSNGCNKVLNCGDSNCPDAYHQPNDVKTNTCPGGTNYKVVFCP*